FvH4_2g14522

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000182
Physical Location & Seq
Reverse (-)
12756113 .. 12757996
1884 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g14522.t1

Sequence Viewer

Length: 1551 bp
ATGCTACGCTGCTATTCCAAGGTGATAAGCTCTTTTATCATCAATATTTGGACACCCAGACTTCTGTTAAGCACCATGGCCTTTAGCCCCAATGCAAGAGCTCATACCAGCTTTTCGCGAAATAGGAGACCAGTTATTTTCAACTCTTTTCCTAGACCCCAACAAGATCAACCTCCTTTTGTTACTAGGGTGGGAGATGTGAGAATAGCTGTAGAAAGGGATCAAACCCGTGTCTGTGTACCAAGAAAATCCATGTCCCTTAAGGAACATCTTCTCAAGTTCTGTCTTGTGGCCAAGATTTTTGGCAAGAAAGTTTCCCCAAAAAGGATTGTTAAGAAGTGTAATTTTCTCTGGGCCTCCCTTCATGGCACTGTTAAGATGGTGCAAATGGCGAATGGGTGGTTTGCCTTGGAGTTTGTCCACATTCAAGACCTTGAATATGTCCTCTCCAACCGTCCTTGGTTTGTTAGAGGAAGAATCTTTCATATTCGAAGATGGGCCCCGTCTTTTGATCCAAAAGAGGCTGAGATCGAGACCCTTTCTCTATGGGTACGTCTGACTAACTTGCCTCTGCATTTCTGGAGTGAGGAGGCAATTCTTCCGATGGTGAGGGTGCTAGGTCGCTTCATCAAGCTAGAAGACAGGACGAAGAACACTGAGAATTATATCTTTGCTCGTGCTTGCATGGAAATCGACCTACGAACCCCCCTGAAGCGTGTTCTTGTTGTCCAAGAGGAAGAGGAAGGTGACCTGGAGTTTGATCTAGTAAGTAAACCTTCTAAAATTTATGTTTCTTATGAAGGGGTGTTTGAGGTCTGTTTTGAGTGTGGCAGCCACAAACACAAGATATGGGAGTGCCCTAAGAAGAAAAAGGAGAAGCATTTCGTTATGGTGGATAGGGCAGAGAGTGACAATGAAATTGAGCCAGAGGAAGTGGATGTGGATCAGGAAATCAAACAGCTGGCCTCAACGGAAGTGATGATTTACTTTCCTCTTCCAGCCAAGAATGTCAGTCTAGTGCATGAAGAACCAATTAATGAGGATCTCAACCCTCCATCCCCGGGATGGACTCAAGTGCAAAGGAAGAGTAAGGCAACTTCCAAAGCTGCTGAGTCAAGTGGTGTTCAAGGAGTCAACCCTTCTGCTTCTACAGTCAAGGCTCCAAAAAAGAAAAGAACCTCAATGGTCAAACCTGGTATCTCTTTTAAGGATGTGACAGTAAGGAATAGTGCTATTTTTATCTCTGATGCAAAAGTTAAACAAAACCTGAAGATTACCAACTCTAAAAGTTCCTCAAGCAATAAGGAAGAGGTGTCTGAGAATATGATAGCTGGGAAAGATGCTGGTGAGGCTGATAGGGATACAAGTATGCTGGAAGTTGGCTTGCAGGCTAATAAGGGAAAAAATGTGTTGTTCATGAGTGAAAGCTCAGAGATGAGCACTGGAACTGGCACAAGGAAGAGGAACAGATCCGGAGATGATGAGAATCTTGTCTATGAATCTGCCGAGGAGGAAGGCAGTGCCTCAACTACCAAACTTGCTAAGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-RVT

Protein Analysis

517

Amino Acids

58.72

Weight (kDa)

9.23

Isoelectric Point (pI)

50.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 91 - 174 9.2e-15 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000182)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21471 FvH4_1g27953 FvH4_1g28801 FvH4_2g14522 FvH4_3g04280 FvH4_3g28251 FvH4_4g07491 FvH4_4g30262
malus_domestica MD10G1046400.v1.1 MD10G1126900.v1.1 MD11G1236100.v1.1
prunus_persica Prupe.1G148300_v2.0.a1 Prupe.2G036800_v2.0.a1 Prupe.8G054600_v2.0.a1 Prupe.8G054700_v2.0.a1
pyrus_communis pycom05g05520 pycom08g11160 pycom13g29480
rosa_chinensis RchiOBHm_Chr7g0182921 RchiOBHm_Chr7g0230111
rosa_laevigata RLG00000000536 RLG00000001385 RLG00000001492 RLG00000002640 RLG00000003082 RLG00000005042 RLG00000007254 RLG00000007773 RLG00000008594 RLG00000009508 RLG00000010355 RLG00000013369 RLG00000014370 RLG00000014371 RLG00000018745 RLG00000020268 RLG00000020832 RLG00000022569 RLG00000028073 RLG00000028388 RLG00000028677 RLG00000035645
rosa_multiflora Rmu_co8277499.1_g000001 Rmu_co8500999.1_g000001 Rmu_sc0000014.1_g000025 Rmu_sc0000103.1_g000003 Rmu_sc0000168.1_g000019 Rmu_sc0000283.1_g000006 Rmu_sc0000693.1_g000080 Rmu_sc0000997.1_g000005 Rmu_sc0001228.1_g000005 Rmu_sc0001231.1_g000023 Rmu_sc0002833.1_g000037 Rmu_sc0002869.1_g000015 Rmu_sc0003545.1_g000003 Rmu_sc0003693.1_g000028 Rmu_sc0004000.1_g000022 Rmu_sc0004454.1_g000007 Rmu_sc0004976.1_g000036 Rmu_sc0005014.1_g000013 Rmu_sc0005046.1_g000013 Rmu_sc0005063.1_g000009 Rmu_sc0005652.1_g000002 Rmu_sc0005697.1_g000008 Rmu_sc0006989.1_g000014 Rmu_sc0008957.1_g000003 Rmu_sc0011659.1_g000001 Rmu_sc0027477.1_g000001 Rmu_ssc0000387.1_g000021
rosa_roxburghii Rroxscaffold_1G00020860 Rroxscaffold_1G00035780 Rroxscaffold_1G00051370 Rroxscaffold_2G00101730 Rroxscaffold_3G00230130 Rroxscaffold_4G00280070 Rroxscaffold_4G00281160 Rroxscaffold_4G00318780 Rroxscaffold_5G00341570 Rroxscaffold_5G00341580 Rroxscaffold_7G00191230 Rroxscaffold_7G00195880 Rroxscaffold_7G00195890 Rroxscaffold_7G00209080 Rroxscaffold_7G00209090
rosa_rugosa Rorug02G0170400 Rorug03G0234500 Rorug04G0045200 Rorug07G0191000
rosa_samantha Rh1AG012200 Rh1AG012300 Rh1AG021700 Rh1AG033800 Rh1AG033900 Rh1AG048100 Rh1AG087000 Rh1AG168600 Rh1CG004600 Rh2BG192700 Rh2BG200800 Rh2BG310200 Rh2BG356900 Rh2BG377900 Rh2BG378000 Rh2CG356300 Rh2DG394800 Rh3AG199000 Rh3AG258700 Rh3AG258800 Rh3AG324400 Rh3BG202300 Rh3BG202400 Rh3BG228800 Rh3BG318800 Rh3BG360400 Rh3BG368300 Rh3BG373700 Rh4AG071400 Rh4AG153700 Rh4AG224300 Rh4AG224400 Rh4CG044000 Rh4CG077200 Rh4CG077300 Rh4CG238700 Rh4CG238800 Rh4CG238900 Rh5BG367100 Rh5BG379500 Rh5BG379600 Rh5BG396700 Rh5BG412900 Rh5DG427200 Rh6AG015200 Rh6AG015300 Rh6AG122800 Rh6AG175600 Rh6AG187700 Rh6AG187800 Rh6AG260800 Rh6AG355000 Rh6BG074900 Rh6BG102300 Rh7AG127400 Rh7AG157500 Rh7AG157600 Rh7AG212200 Rh7AG331400 Rh7AG412000 Rh7CG055400 Rh7CG131400 Rh7CG131500 Rh7CG224300 Rh7CG267100 Rh7CG348800
rosa_wichuraiana Rw0G009820 Rw1G000520 Rw1G008820 Rw4G014110 Rw4G019370 Rw4G022440 Rw6G010550 Rw7G001520 Rw7G018400 Rw7G025210 Rw7G027910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 118
AccIII TCCGGA 1 cut(s) 1472
AclWI GGATC 5 cut(s) 228, 506, 951, 1050, 1464
AcoI YGGCCR 1 cut(s) 291
AcsI RAATTY 1 cut(s) 783
AcuI CTGAAG 2 cut(s) 731, 1289
AfaI GTAC 2 cut(s) 240, 552
AfiI CCNNNNNNNGG 3 cut(s) 324, 1061, 1065
AflII CTTAAG 1 cut(s) 260
AgsI TTSAA 4 cut(s) 142, 428, 437, 1127
AjnI CCWGG 2 cut(s) 750, 1192
AluBI AGCT 9 cut(s) 30, 101, 111, 209, 634, 961, 1106, 1331, 1428
AluI AGCT 9 cut(s) 30, 101, 111, 209, 634, 961, 1106, 1331, 1428
Alw21I GWGCWC 2 cut(s) 103, 1442
Alw26I GTCTC 2 cut(s) 121, 527
AlwI GGATC 5 cut(s) 228, 506, 951, 1050, 1464
Ama87I CYCGRG 1 cut(s) 1060
Aor13HI TCCGGA 1 cut(s) 1472
AoxI GGCC 5 cut(s) 78, 291, 354, 498, 963
ApaI GGGCCC 1 cut(s) 502
ApeKI GCWGC 3 cut(s) 9, 831, 1106
ApoI RAATTY 1 cut(s) 783
ArsI GACNNNNNNTTYG 2 cut(s) 740, 772
AseI ATTAAT 1 cut(s) 1035
Asp700I GAANNNNTTC 2 cut(s) 270, 881
AspS9I GGNCC 3 cut(s) 354, 498, 499
AsuC2I CCSGG 2 cut(s) 1061, 1062
AsuHPI GGTGA 4 cut(s) 34, 619, 758, 1358
AsuII TTCGAA 1 cut(s) 490
AvaI CYCGRG 1 cut(s) 1060
BaeGI GKGCMC 2 cut(s) 502, 860
BalI TGGCCA 1 cut(s) 293
BanII GRGCYC 2 cut(s) 103, 502
BarI GAAGNNNNNNTAC 2 cut(s) 1081, 1113
BauI CACGAG 1 cut(s) 675
BbsI GAAGAC 1 cut(s) 645
Bbv12I GWGCWC 2 cut(s) 103, 1442
BbvI GCAGC 2 cut(s) 843, 1093
BccI CCATC 5 cut(s) 373, 489, 598, 1059, 1063
BcgI CGANNNNNNTGC 2 cut(s) 673, 707
BciT130I CCWGG 2 cut(s) 752, 1194
BciVI GTATCC 1 cut(s) 1354
BcnI CCSGG 2 cut(s) 1061, 1062
BcoDI GTCTC 2 cut(s) 121, 527
BfaI CTAG 6 cut(s) 153, 186, 617, 635, 764, 1016
BfmI CTRYAG 2 cut(s) 210, 1149
BfrI CTTAAG 1 cut(s) 260
BfuI GTATCC 1 cut(s) 1354
BisI GCNGC 3 cut(s) 10, 832, 1107
BlsI GCNGC 3 cut(s) 11, 833, 1108
Bme1390I CCNGG 4 cut(s) 752, 1061, 1062, 1194
BmeT110I CYCGRG 1 cut(s) 1060
BmgT120I GGNCC 3 cut(s) 354, 498, 499
BmiI GGNNCC 3 cut(s) 500, 501, 1161
BmrFI CCNGG 4 cut(s) 752, 1061, 1062, 1194
BmsI GCATC 2 cut(s) 1237, 1330
BpiI GAAGAC 1 cut(s) 645
BpmI CTGGAG 2 cut(s) 601, 773
Bpu14I TTCGAA 1 cut(s) 490
BpuEI CTTGAG 3 cut(s) 260, 1056, 1279
BpuMI CCSGG 2 cut(s) 1061, 1062
BsaBI GATNNNNATC 2 cut(s) 942, 1485
BsaI GGTCTC 2 cut(s) 121, 527
BsaJI CCNNGG 7 cut(s) 18, 75, 408, 458, 1059, 1060, 1506
BsaWI WCCGGW 1 cut(s) 1472
Bsc4I CCNNNNNNNGG 3 cut(s) 324, 1061, 1065
Bse1I ACTGG 3 cut(s) 131, 1447, 1453
Bse8I GATNNNNATC 2 cut(s) 942, 1485
BseAI TCCGGA 1 cut(s) 1472
BseBI CCWGG 2 cut(s) 752, 1194
BseDI CCNNGG 7 cut(s) 18, 75, 408, 458, 1059, 1060, 1506
BseGI GGATG 4 cut(s) 943, 1055, 1070, 1216
BseJI GATNNNNATC 2 cut(s) 942, 1485
BseLI CCNNNNNNNGG 3 cut(s) 324, 1061, 1065
BseMII CTCAG 5 cut(s) 516, 648, 1101, 1308, 1443
BseNI ACTGG 3 cut(s) 131, 1447, 1453
BseRI GAGGAG 2 cut(s) 602, 1523
BseSI GKGCMC 2 cut(s) 502, 860
BseXI GCAGC 2 cut(s) 843, 1093
BseYI CCCAGC 1 cut(s) 1331
Bsh1236I CGCG 1 cut(s) 118
BshFI GGCC 5 cut(s) 80, 293, 356, 500, 965
BsiHKAI GWGCWC 2 cut(s) 103, 1442
BsiHKCI CYCGRG 1 cut(s) 1060
BsiSI CCGG 2 cut(s) 1061, 1473
BslFI GGGAC 1 cut(s) 241
BslI CCNNNNNNNGG 3 cut(s) 324, 1061, 1065
BsmAI GTCTC 2 cut(s) 121, 527
BsmFI GGGAC 1 cut(s) 241
BsnI GGCC 5 cut(s) 80, 293, 356, 500, 965
Bso31I GGTCTC 2 cut(s) 121, 527
BsoBI CYCGRG 1 cut(s) 1060
Bsp119I TTCGAA 1 cut(s) 490
Bsp120I GGGCCC 1 cut(s) 498
Bsp1286I GDGCHC 4 cut(s) 103, 502, 860, 1442
Bsp13I TCCGGA 1 cut(s) 1472
Bsp143I GATC 8 cut(s) 166, 220, 511, 528, 760, 943, 1042, 1469
Bsp19I CCATGG 1 cut(s) 75
Bsp68I TCGCGA 1 cut(s) 118
BspANI GGCC 5 cut(s) 80, 293, 356, 500, 965
BspCNI CTCAG 5 cut(s) 517, 649, 1102, 1309, 1442
BspEI TCCGGA 1 cut(s) 1472
BspFNI CGCG 1 cut(s) 118
BspHI TCATGA 1 cut(s) 1416
BspLI GGNNCC 3 cut(s) 500, 501, 1161
BspPI GGATC 5 cut(s) 228, 506, 951, 1050, 1464
BspT104I TTCGAA 1 cut(s) 490
BspTI CTTAAG 1 cut(s) 260
BspTNI GGTCTC 2 cut(s) 121, 527
BsrI ACTGG 3 cut(s) 131, 1447, 1453
BssECI CCNNGG 7 cut(s) 18, 75, 408, 458, 1059, 1060, 1506
BssMI GATC 8 cut(s) 166, 220, 511, 528, 760, 943, 1042, 1469
BssSI CACGAG 1 cut(s) 675
BssT1I CCWWGG 4 cut(s) 18, 75, 408, 458
Bst2BI CACGAG 1 cut(s) 675
Bst2UI CCWGG 2 cut(s) 752, 1194
Bst4CI ACNGT 4 cut(s) 373, 455, 1153, 1219
Bst6I CTCTTC 5 cut(s) 732, 999, 1079, 1302, 1454
BstAFI CTTAAG 1 cut(s) 260
BstBI TTCGAA 1 cut(s) 490
BstC8I GCNNGC 4 cut(s) 682, 963, 1385, 1389
BstDEI CTNAG 7 cut(s) 525, 657, 861, 1110, 1317, 1429, 1542
BstDSI CCRYGG 1 cut(s) 75
BstEII GGTNACC 1 cut(s) 746
BstF5I GGATG 4 cut(s) 943, 1055, 1070, 1216
BstFNI CGCG 1 cut(s) 118
BstKTI GATC 8 cut(s) 169, 223, 514, 531, 763, 946, 1045, 1472
BstMAI GTCTC 2 cut(s) 121, 527
BstMBI GATC 8 cut(s) 166, 220, 511, 528, 760, 943, 1042, 1469
BstMWI GCNNNNNNNGC 1 cut(s) 1349
BstNI CCWGG 2 cut(s) 752, 1194
BstPI GGTNACC 1 cut(s) 746
BstSCI CCNGG 4 cut(s) 750, 1059, 1060, 1192
BstSFI CTRYAG 2 cut(s) 210, 1149
BstSLI GKGCMC 2 cut(s) 502, 860
BstUI CGCG 1 cut(s) 118
BstV1I GCAGC 2 cut(s) 843, 1093
BstV2I GAAGAC 1 cut(s) 645
BstX2I RGATCY 2 cut(s) 1042, 1469
BstYI RGATCY 2 cut(s) 1042, 1469
BsuI GTATCC 1 cut(s) 1354
BsuRI GGCC 5 cut(s) 80, 293, 356, 500, 965
BtgI CCRYGG 1 cut(s) 75
BtsCI GGATG 4 cut(s) 943, 1055, 1070, 1216
BtsI GCAGTG 1 cut(s) 1525
BtsIMutI CAGTG 4 cut(s) 369, 654, 1440, 1525
BtuMI TCGCGA 1 cut(s) 118
Cac8I GCNNGC 4 cut(s) 682, 963, 1385, 1389
CciI TCATGA 1 cut(s) 1416
Cfr13I GGNCC 3 cut(s) 354, 498, 499
Cfr9I CCCGGG 1 cut(s) 1060
CsiI ACCWGGT 1 cut(s) 1192
Csp6I GTAC 2 cut(s) 239, 551
CviAII CATG 6 cut(s) 76, 253, 365, 685, 1022, 1417
CviQI GTAC 2 cut(s) 239, 551
DdeI CTNAG 7 cut(s) 525, 657, 861, 1110, 1317, 1429, 1542
DpnI GATC 8 cut(s) 168, 222, 513, 530, 762, 945, 1044, 1471
DpnII GATC 8 cut(s) 166, 220, 511, 528, 760, 943, 1042, 1469
EaeI YGGCCR 1 cut(s) 291
Eam1104I CTCTTC 5 cut(s) 732, 999, 1079, 1302, 1454
EarI CTCTTC 5 cut(s) 732, 999, 1079, 1302, 1454
Ecl136II GAGCTC 1 cut(s) 101
Eco130I CCWWGG 4 cut(s) 18, 75, 408, 458
Eco24I GRGCYC 2 cut(s) 103, 502
Eco31I GGTCTC 2 cut(s) 121, 527
Eco53kI GAGCTC 1 cut(s) 101
Eco57I CTGAAG 2 cut(s) 731, 1289
Eco88I CYCGRG 1 cut(s) 1060
Eco91I GGTNACC 1 cut(s) 746
EcoICRI GAGCTC 1 cut(s) 101
EcoO109I RGGNCCY 1 cut(s) 499
EcoO65I GGTNACC 1 cut(s) 746
EcoRII CCWGG 2 cut(s) 750, 1192
EcoT14I CCWWGG 4 cut(s) 18, 75, 408, 458
EcoT38I GRGCYC 2 cut(s) 103, 502
ErhI CCWWGG 4 cut(s) 18, 75, 408, 458
FaeI CATG 6 cut(s) 79, 256, 368, 688, 1025, 1420
FalI AAGNNNNNCTT 2 cut(s) 760, 792
FaqI GGGAC 1 cut(s) 241
FatI CATG 6 cut(s) 75, 252, 364, 684, 1021, 1416
Fnu4HI GCNGC 3 cut(s) 10, 832, 1107
FokI GGATG 4 cut(s) 950, 1042, 1077, 1223
FriOI GRGCYC 2 cut(s) 103, 502
Fsp4HI GCNGC 3 cut(s) 10, 832, 1107
FspBI CTAG 6 cut(s) 153, 186, 617, 635, 764, 1016
GluI GCNGC 3 cut(s) 10, 832, 1107
GsaI CCCAGC 1 cut(s) 1335
GsuI CTGGAG 2 cut(s) 601, 773
HaeIII GGCC 5 cut(s) 80, 293, 356, 500, 965
HapII CCGG 2 cut(s) 1061, 1473
Hin1II CATG 6 cut(s) 79, 256, 368, 688, 1025, 1420
HincII GTYRAC 1 cut(s) 1135
HindII GTYRAC 1 cut(s) 1135
HinfI GANTC 6 cut(s) 477, 1069, 1112, 1131, 1486, 1499
HpaII CCGG 2 cut(s) 1061, 1473
HphI GGTGA 4 cut(s) 34, 619, 758, 1358
Hpy166II GTNNAC 4 cut(s) 239, 421, 773, 1135
Hpy188I TCNGA 5 cut(s) 558, 603, 1246, 1318, 1432
Hpy188III TCNNGA 7 cut(s) 117, 428, 532, 580, 947, 1417, 1473
Hpy8I GTNNAC 4 cut(s) 239, 421, 773, 1135
HpyAV CCTTC 6 cut(s) 371, 737, 786, 794, 1149, 1508
HpyCH4III ACNGT 4 cut(s) 373, 455, 1153, 1219
HpyCH4IV ACGT 1 cut(s) 553
HpyCH4V TGCA 8 cut(s) 95, 385, 574, 684, 1021, 1078, 1250, 1387
HpyF10VI GCNNNNNNNGC 1 cut(s) 1349
HpyF3I CTNAG 7 cut(s) 525, 657, 861, 1110, 1317, 1429, 1542
HpySE526I ACGT 1 cut(s) 553
Hsp92II CATG 6 cut(s) 79, 256, 368, 688, 1025, 1420
Kpn2I TCCGGA 1 cut(s) 1472
Kzo9I GATC 8 cut(s) 166, 220, 511, 528, 760, 943, 1042, 1469
LmnI GCTCC 1 cut(s) 1165
Lsp1109I GCAGC 2 cut(s) 843, 1093
LweI GCATC 2 cut(s) 1237, 1330
MabI ACCWGGT 1 cut(s) 1192
MaeI CTAG 6 cut(s) 153, 186, 617, 635, 764, 1016
MaeII ACGT 1 cut(s) 553
MaeIII GTNAC 4 cut(s) 181, 746, 908, 1213
MalI GATC 8 cut(s) 168, 222, 513, 530, 762, 945, 1044, 1471
MboI GATC 8 cut(s) 166, 220, 511, 528, 760, 943, 1042, 1469
MflI RGATCY 2 cut(s) 1042, 1469
MhlI GDGCHC 4 cut(s) 103, 502, 860, 1442
MlsI TGGCCA 1 cut(s) 293
MluCI AATT 6 cut(s) 343, 594, 661, 783, 918, 1032
MluNI TGGCCA 1 cut(s) 293
MlyI GAGTC 3 cut(s) 1063, 1121, 1140
MmeI TCCRAC 1 cut(s) 474
Mox20I TGGCCA 1 cut(s) 293
MroI TCCGGA 1 cut(s) 1472
MroXI GAANNNNTTC 2 cut(s) 270, 881
MscI TGGCCA 1 cut(s) 293
MseI TTAA 7 cut(s) 68, 261, 333, 375, 1035, 1206, 1257
Msp20I TGGCCA 1 cut(s) 293
MspA1I CMGCKG 1 cut(s) 961
MspCI CTTAAG 1 cut(s) 260
MspI CCGG 2 cut(s) 1061, 1473
MspR9I CCNGG 4 cut(s) 752, 1061, 1062, 1194
MvaI CCWGG 2 cut(s) 752, 1194
MvnI CGCG 1 cut(s) 118
MwoI GCNNNNNNNGC 1 cut(s) 1349
NciI CCSGG 2 cut(s) 1061, 1062
NcoI CCATGG 1 cut(s) 75
NdeII GATC 8 cut(s) 166, 220, 511, 528, 760, 943, 1042, 1469
NlaIII CATG 6 cut(s) 79, 256, 368, 688, 1025, 1420
NlaIV GGNNCC 3 cut(s) 500, 501, 1161
NmeAIII GCCGAG 1 cut(s) 1531
NmuCI GTSAC 3 cut(s) 746, 908, 1213
NruI TCGCGA 1 cut(s) 118
NspV TTCGAA 1 cut(s) 490
PagI TCATGA 1 cut(s) 1416
PdmI GAANNNNTTC 2 cut(s) 270, 881
PfeI GAWTC 3 cut(s) 477, 1486, 1499
PkrI GCNGC 3 cut(s) 11, 833, 1108
PleI GAGTC 3 cut(s) 1063, 1120, 1139
PpsI GAGTC 3 cut(s) 1063, 1120, 1139
PshBI ATTAAT 1 cut(s) 1035
Psp124BI GAGCTC 1 cut(s) 103
Psp6I CCWGG 2 cut(s) 750, 1192
PspEI GGTNACC 1 cut(s) 746
PspFI CCCAGC 1 cut(s) 1331
PspGI CCWGG 2 cut(s) 750, 1192
PspN4I GGNNCC 3 cut(s) 500, 501, 1161
PspOMI GGGCCC 1 cut(s) 498
PspPI GGNCC 3 cut(s) 354, 498, 499
PsuI RGATCY 2 cut(s) 1042, 1469
PvuII CAGCTG 1 cut(s) 961
RruI TCGCGA 1 cut(s) 118
RsaI GTAC 2 cut(s) 240, 552
RsaNI GTAC 2 cut(s) 239, 551
SacI GAGCTC 1 cut(s) 103
SaqAI TTAA 7 cut(s) 68, 261, 333, 375, 1035, 1206, 1257
SatI GCNGC 3 cut(s) 10, 832, 1107
Sau3AI GATC 8 cut(s) 166, 220, 511, 528, 760, 943, 1042, 1469
Sau96I GGNCC 3 cut(s) 354, 498, 499
SchI GAGTC 3 cut(s) 1063, 1121, 1140
ScrFI CCNGG 4 cut(s) 752, 1061, 1062, 1194
SduI GDGCHC 4 cut(s) 103, 502, 860, 1442
SexAI ACCWGGT 1 cut(s) 1192
SfaNI GCATC 2 cut(s) 1237, 1330
SfcI CTRYAG 2 cut(s) 210, 1149
SfuI TTCGAA 1 cut(s) 490
SmaI CCCGGG 1 cut(s) 1062
SmlI CTYRAG 4 cut(s) 260, 275, 1071, 1294
SmoI CTYRAG 4 cut(s) 260, 275, 1071, 1294
Sse9I AATT 6 cut(s) 343, 594, 661, 783, 918, 1032
SspI AATATT 1 cut(s) 46
SspMI CTAG 6 cut(s) 153, 186, 617, 635, 764, 1016
SstI GAGCTC 1 cut(s) 103
StyD4I CCNGG 4 cut(s) 750, 1059, 1060, 1192
StyI CCWWGG 4 cut(s) 18, 75, 408, 458
TaaI ACNGT 4 cut(s) 373, 455, 1153, 1219
TaiI ACGT 1 cut(s) 556
TaqI TCGA 3 cut(s) 490, 531, 693
TasI AATT 6 cut(s) 343, 594, 661, 783, 918, 1032
TfiI GAWTC 3 cut(s) 477, 1486, 1499
Tru1I TTAA 7 cut(s) 68, 261, 333, 375, 1035, 1206, 1257
Tru9I TTAA 7 cut(s) 68, 261, 333, 375, 1035, 1206, 1257
TscAI CASTG 4 cut(s) 376, 661, 1447, 1525
TseFI GTSAC 3 cut(s) 746, 908, 1213
TseI GCWGC 3 cut(s) 9, 831, 1106
Tsp45I GTSAC 3 cut(s) 746, 908, 1213
TspDTI ATGAA 8 cut(s) 353, 473, 616, 813, 930, 1038, 1405, 1512
TspGWI ACGGA 1 cut(s) 986
TspMI CCCGGG 1 cut(s) 1060
TspRI CASTG 4 cut(s) 376, 661, 1447, 1525
Vha464I CTTAAG 1 cut(s) 260
VspI ATTAAT 1 cut(s) 1035
XapI RAATTY 1 cut(s) 783
XcmI CCANNNNNNNNNTGG 1 cut(s) 1062
XmaI CCCGGG 1 cut(s) 1060
XmnI GAANNNNTTC 2 cut(s) 270, 881
XspI CTAG 6 cut(s) 153, 186, 617, 635, 764, 1016
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.