RLG00000009508

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0000182
Physical Location & Seq
Forward (+)
53768952 .. 53770318
1367 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009508

Sequence Viewer

Length: 1296 bp
ATGGCCTGCAGCCCCAATGCAAGAGCCTACGTAGGTACCTCCAAAATTAGGAATAACAACATGTTCAACCCCTACCCCAGATCAGCCCCAAATGAACCATCCTTTAATGCCACTGTCGGCAATGCTAGGATTGATGTGCAGTGGAATGAAACCCATATCTTTGTTCCCAAATCTGTTGCCACCCACAAAGAACACCTTGAAAACTACTGCCTTGTTGTCAAGGTGTTTAGAAAGAGAGTCCCAGTGAAGAAAGTGATTAGGAAGTGTAGACAGAACTGGGCTAACCTTAGTGGCACTGTCAAGTTAAACCAAATGGCAAATAGCTGGTTCTCCCTAGAATTCTCCATGATGGAGGATGTACACTATGTCCTGGAAAACCGTCCTTGGTTTGTGAAAGGGCGCATTTTCCACATCAGAAGATGGTCCCCAAATTTCGACCCGGTCAAAGCTACGATTGAGTCTCTATTTGTTTTGGAGGTTCGTAAAATAGATGAGCGTACAGAACAAGGAAAAAATTACATCTTTGTATGTGTCTTCTTGGAAATTGATCTCCGAACGCCGCTAAAACGAGTGCTTAGGATCTGTGATGAGGACAAGGGGGAAGCTGACCTCTTGATGGAGCTTTGCAGTGAGCTTGCTAGGGTTTTCGTGTCGTATAAAGGAATCTTTGAAGTCTGCTTCGAATGTGGTAGCCATCGCCACAAGATAAAGACTTGTCCGTATAAGGAAGTGGAACAATGCTTTGTTATGGTGGATCGAGCTAAGTCGAATGACAATATTGAACCTGTTCCAACTGAAGTGGGACCAGAGCTACTTGAGCTAGTTTTAGAAAAAGTCATGTTGTACTTTCCCCAACCAATCAGGAATGATGTGGTTTCTGAGGAACCTGAGGCCAACAATGTTGATCTAAATCCTCCTTCACCAGGATGGAAGCTGGTCCAAAGAAGCAAAGGCAAAGTGTCAAACAAGGAGGCTAACCCTAAATCAAAGTTGGTACAGGCGGGAAAAAGTTACAGGGATGCTGGGTACATCATCATAGGCAATGGTGGGAGAGATTTCTCTGCAGAAGAGCACAAAGAGGATAGTGACACTAGCAGTGAAGGAGCTGGGGGGAGTTCATCTAATTCTTCTTCATTAAATGATATCTCTTTTAACGACCTCGAGGAAATAGCAAAAATTTATGATCTAAATGATGACACCCCTGAACCCGATGATCATGCCAATAGAGTGATTTACTCTCCAACTAACCCTATGGACTATTTCTACGCTAACTTCAGTTCACCATTGAGACTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-RVT

Protein Analysis

432

Amino Acids

49.23

Weight (kDa)

6.2

Isoelectric Point (pI)

47.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 68 - 147 4.6e-14 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000182)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21471 FvH4_1g27953 FvH4_1g28801 FvH4_2g14522 FvH4_3g04280 FvH4_3g28251 FvH4_4g07491 FvH4_4g30262
malus_domestica MD10G1046400.v1.1 MD10G1126900.v1.1 MD11G1236100.v1.1
prunus_persica Prupe.1G148300_v2.0.a1 Prupe.2G036800_v2.0.a1 Prupe.8G054600_v2.0.a1 Prupe.8G054700_v2.0.a1
pyrus_communis pycom05g05520 pycom08g11160 pycom13g29480
rosa_chinensis RchiOBHm_Chr7g0182921 RchiOBHm_Chr7g0230111
rosa_laevigata RLG00000000536 RLG00000001385 RLG00000001492 RLG00000002640 RLG00000003082 RLG00000005042 RLG00000007254 RLG00000007773 RLG00000008594 RLG00000009508 RLG00000010355 RLG00000013369 RLG00000014370 RLG00000014371 RLG00000018745 RLG00000020268 RLG00000020832 RLG00000022569 RLG00000028073 RLG00000028388 RLG00000028677 RLG00000035645
rosa_multiflora Rmu_co8277499.1_g000001 Rmu_co8500999.1_g000001 Rmu_sc0000014.1_g000025 Rmu_sc0000103.1_g000003 Rmu_sc0000168.1_g000019 Rmu_sc0000283.1_g000006 Rmu_sc0000693.1_g000080 Rmu_sc0000997.1_g000005 Rmu_sc0001228.1_g000005 Rmu_sc0001231.1_g000023 Rmu_sc0002833.1_g000037 Rmu_sc0002869.1_g000015 Rmu_sc0003545.1_g000003 Rmu_sc0003693.1_g000028 Rmu_sc0004000.1_g000022 Rmu_sc0004454.1_g000007 Rmu_sc0004976.1_g000036 Rmu_sc0005014.1_g000013 Rmu_sc0005046.1_g000013 Rmu_sc0005063.1_g000009 Rmu_sc0005652.1_g000002 Rmu_sc0005697.1_g000008 Rmu_sc0006989.1_g000014 Rmu_sc0008957.1_g000003 Rmu_sc0011659.1_g000001 Rmu_sc0027477.1_g000001 Rmu_ssc0000387.1_g000021
rosa_roxburghii Rroxscaffold_1G00020860 Rroxscaffold_1G00035780 Rroxscaffold_1G00051370 Rroxscaffold_2G00101730 Rroxscaffold_3G00230130 Rroxscaffold_4G00280070 Rroxscaffold_4G00281160 Rroxscaffold_4G00318780 Rroxscaffold_5G00341570 Rroxscaffold_5G00341580 Rroxscaffold_7G00191230 Rroxscaffold_7G00195880 Rroxscaffold_7G00195890 Rroxscaffold_7G00209080 Rroxscaffold_7G00209090
rosa_rugosa Rorug02G0170400 Rorug03G0234500 Rorug04G0045200 Rorug07G0191000
rosa_samantha Rh1AG012200 Rh1AG012300 Rh1AG021700 Rh1AG033800 Rh1AG033900 Rh1AG048100 Rh1AG087000 Rh1AG168600 Rh1CG004600 Rh2BG192700 Rh2BG200800 Rh2BG310200 Rh2BG356900 Rh2BG377900 Rh2BG378000 Rh2CG356300 Rh2DG394800 Rh3AG199000 Rh3AG258700 Rh3AG258800 Rh3AG324400 Rh3BG202300 Rh3BG202400 Rh3BG228800 Rh3BG318800 Rh3BG360400 Rh3BG368300 Rh3BG373700 Rh4AG071400 Rh4AG153700 Rh4AG224300 Rh4AG224400 Rh4CG044000 Rh4CG077200 Rh4CG077300 Rh4CG238700 Rh4CG238800 Rh4CG238900 Rh5BG367100 Rh5BG379500 Rh5BG379600 Rh5BG396700 Rh5BG412900 Rh5DG427200 Rh6AG015200 Rh6AG015300 Rh6AG122800 Rh6AG175600 Rh6AG187700 Rh6AG187800 Rh6AG260800 Rh6AG355000 Rh6BG074900 Rh6BG102300 Rh7AG127400 Rh7AG157500 Rh7AG157600 Rh7AG212200 Rh7AG331400 Rh7AG412000 Rh7CG055400 Rh7CG131400 Rh7CG131500 Rh7CG224300 Rh7CG267100 Rh7CG348800
rosa_wichuraiana Rw0G009820 Rw1G000520 Rw1G008820 Rw4G014110 Rw4G019370 Rw4G022440 Rw6G010550 Rw7G001520 Rw7G018400 Rw7G025210 Rw7G027910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 1160
Acc65I GGTACC 1 cut(s) 35
AccB1I GGYRCC 1 cut(s) 35
AccI GTMKAC 1 cut(s) 268
AciI CCGC 2 cut(s) 560, 1001
AclWI GGATC 2 cut(s) 587, 762
AcsI RAATTY 3 cut(s) 338, 430, 1176
AcuI CTGAAG 2 cut(s) 816, 1258
AfaI GTAC 6 cut(s) 37, 360, 499, 845, 996, 1028
AfiI CCNNNNNNNGG 3 cut(s) 48, 616, 923
AflIII ACRYGT 1 cut(s) 60
AgsI TTSAA 4 cut(s) 67, 200, 671, 782
AjnI CCWGG 2 cut(s) 369, 922
Alw21I GWGCWC 1 cut(s) 1074
Alw26I GTCTC 2 cut(s) 465, 1282
AlwI GGATC 2 cut(s) 587, 762
Ama87I CYCGRG 1 cut(s) 1160
AoxI GGCC 2 cut(s) 3, 891
ApeKI GCWGC 1 cut(s) 9
ApoI RAATTY 3 cut(s) 338, 430, 1176
Asp700I GAANNNNTTC 1 cut(s) 786
Asp718I GGTACC 1 cut(s) 35
AspLEI GCGC 1 cut(s) 402
AspS9I GGNCC 3 cut(s) 423, 803, 937
AsuC2I CCSGG 1 cut(s) 440
AsuHPI GGTGA 2 cut(s) 912, 1272
AsuII TTCGAA 1 cut(s) 681
AvaI CYCGRG 1 cut(s) 1160
AvaII GGWCC 3 cut(s) 423, 803, 937
AxyI CCTNAGG 1 cut(s) 888
BaeI ACNNNNGTAYC 2 cut(s) 19, 52
BanI GGYRCC 1 cut(s) 35
BbsI GAAGAC 1 cut(s) 526
Bbv12I GWGCWC 1 cut(s) 1074
BbvI GCAGC 1 cut(s) 21
BccI CCATC 6 cut(s) 106, 343, 414, 610, 702, 921
BcgI CGANNNNNNTGC 2 cut(s) 1199, 1233
BciT130I CCWGG 2 cut(s) 371, 924
BclI TGATCA 1 cut(s) 1213
BcnI CCSGG 1 cut(s) 440
BcoDI GTCTC 2 cut(s) 465, 1282
BfaI CTAG 5 cut(s) 126, 335, 639, 821, 1092
BfmI CTRYAG 3 cut(s) 7, 1062, 1292
BisI GCNGC 2 cut(s) 10, 560
BlsI GCNGC 2 cut(s) 11, 561
Bme1390I CCNGG 3 cut(s) 371, 440, 924
Bme18I GGWCC 3 cut(s) 423, 803, 937
BmeT110I CYCGRG 1 cut(s) 1160
BmgT120I GGNCC 3 cut(s) 423, 803, 937
BmiI GGNNCC 4 cut(s) 37, 425, 804, 885
BmrFI CCNGG 3 cut(s) 371, 440, 924
BmrI ACTGGG 2 cut(s) 236, 286
BmsI GCATC 1 cut(s) 1009
BmuI ACTGGG 2 cut(s) 236, 286
BpiI GAAGAC 1 cut(s) 526
Bpu10I CCTNAGC 1 cut(s) 575
Bpu14I TTCGAA 1 cut(s) 681
BpuEI CTTGAG 1 cut(s) 836
BpuMI CCSGG 1 cut(s) 440
BsaAI YACGTR 1 cut(s) 31
BsaBI GATNNNNATC 1 cut(s) 909
BsaJI CCNNGG 1 cut(s) 383
Bsc4I CCNNNNNNNGG 3 cut(s) 48, 616, 923
Bse1I ACTGG 2 cut(s) 242, 281
Bse21I CCTNAGG 1 cut(s) 888
Bse3DI GCAATG 2 cut(s) 127, 1048
Bse8I GATNNNNATC 1 cut(s) 909
BseBI CCWGG 2 cut(s) 371, 924
BseDI CCNNGG 1 cut(s) 383
BseGI GGATG 4 cut(s) 98, 361, 932, 1024
BseJI GATNNNNATC 1 cut(s) 909
BseLI CCNNNNNNNGG 3 cut(s) 48, 616, 923
BseMI GCAATG 2 cut(s) 127, 1048
BseMII CTCAG 2 cut(s) 870, 879
BseNI ACTGG 2 cut(s) 242, 281
BseXI GCAGC 1 cut(s) 21
BseYI CCCAGC 2 cut(s) 1022, 1106
BsgI GTGCAG 1 cut(s) 158
BshFI GGCC 2 cut(s) 5, 893
BshNI GGYRCC 1 cut(s) 35
BsiHKAI GWGCWC 1 cut(s) 1074
BsiHKCI CYCGRG 1 cut(s) 1160
BsiSI CCGG 1 cut(s) 440
BslFI GGGAC 3 cut(s) 224, 409, 816
BslI CCNNNNNNNGG 3 cut(s) 48, 616, 923
BsmAI GTCTC 2 cut(s) 465, 1282
BsmFI GGGAC 3 cut(s) 224, 409, 816
BsnI GGCC 2 cut(s) 5, 893
BsoBI CYCGRG 1 cut(s) 1160
Bsp119I TTCGAA 1 cut(s) 681
Bsp1286I GDGCHC 1 cut(s) 1074
Bsp1407I TGTACA 1 cut(s) 358
Bsp143I GATC 7 cut(s) 80, 547, 579, 754, 904, 1183, 1213
BspACI CCGC 2 cut(s) 560, 1001
BspANI GGCC 2 cut(s) 5, 893
BspCNI CTCAG 2 cut(s) 871, 880
BspLI GGNNCC 4 cut(s) 37, 425, 804, 885
BspMAI CTGCAG 2 cut(s) 11, 1066
BspPI GGATC 2 cut(s) 587, 762
BspQI GCTCTTC 1 cut(s) 1062
BspT104I TTCGAA 1 cut(s) 681
BspT107I GGYRCC 1 cut(s) 35
BsrDI GCAATG 2 cut(s) 127, 1048
BsrGI TGTACA 1 cut(s) 358
BsrI ACTGG 2 cut(s) 242, 281
BssECI CCNNGG 1 cut(s) 383
BssMI GATC 7 cut(s) 80, 547, 579, 754, 904, 1183, 1213
BssT1I CCWWGG 1 cut(s) 383
Bst2UI CCWGG 2 cut(s) 371, 924
Bst4CI ACNGT 4 cut(s) 115, 298, 380, 1293
Bst6I CTCTTC 1 cut(s) 1062
BstAUI TGTACA 1 cut(s) 358
BstBAI YACGTR 1 cut(s) 31
BstBI TTCGAA 1 cut(s) 681
BstC8I GCNNGC 2 cut(s) 7, 636
BstDEI CTNAG 5 cut(s) 287, 575, 762, 879, 888
BstENI CCTNNNNNAGG 1 cut(s) 921
BstF5I GGATG 4 cut(s) 98, 361, 932, 1024
BstHHI GCGC 1 cut(s) 402
BstKTI GATC 7 cut(s) 83, 550, 582, 757, 907, 1186, 1216
BstMAI GTCTC 2 cut(s) 465, 1282
BstMBI GATC 7 cut(s) 80, 547, 579, 754, 904, 1183, 1213
BstMWI GCNNNNNNNGC 1 cut(s) 817
BstNI CCWGG 2 cut(s) 371, 924
BstNSI RCATGY 1 cut(s) 64
BstSCI CCNGG 3 cut(s) 369, 438, 922
BstSFI CTRYAG 3 cut(s) 7, 1062, 1292
BstSNI TACGTA 1 cut(s) 31
BstV1I GCAGC 1 cut(s) 21
BstV2I GAAGAC 1 cut(s) 526
BstX2I RGATCY 1 cut(s) 579
BstYI RGATCY 1 cut(s) 579
Bsu36I CCTNAGG 1 cut(s) 888
BsuRI GGCC 2 cut(s) 5, 893
BtgZI GCGATG 1 cut(s) 680
BtsCI GGATG 4 cut(s) 98, 361, 932, 1024
BtsI GCAGTG 3 cut(s) 146, 634, 1102
BtsIMutI CAGTG 6 cut(s) 111, 146, 249, 294, 634, 1102
Cac8I GCNNGC 2 cut(s) 7, 636
CfoI GCGC 1 cut(s) 402
Cfr13I GGNCC 3 cut(s) 423, 803, 937
Csp6I GTAC 6 cut(s) 36, 359, 498, 844, 995, 1027
CspCI CAANNNNNGTGG 2 cut(s) 780, 815
CviAII CATG 4 cut(s) 61, 346, 838, 1217
CviQI GTAC 6 cut(s) 36, 359, 498, 844, 995, 1027
DdeI CTNAG 5 cut(s) 287, 575, 762, 879, 888
DpnI GATC 7 cut(s) 82, 549, 581, 756, 906, 1185, 1215
DpnII GATC 7 cut(s) 80, 547, 579, 754, 904, 1183, 1213
Eam1104I CTCTTC 1 cut(s) 1062
EarI CTCTTC 1 cut(s) 1062
Eco105I TACGTA 1 cut(s) 31
Eco130I CCWWGG 1 cut(s) 383
Eco32I GATATC 1 cut(s) 1144
Eco47I GGWCC 3 cut(s) 423, 803, 937
Eco57I CTGAAG 2 cut(s) 816, 1258
Eco81I CCTNAGG 1 cut(s) 888
Eco88I CYCGRG 1 cut(s) 1160
EcoNI CCTNNNNNAGG 1 cut(s) 921
EcoRI GAATTC 1 cut(s) 338
EcoRII CCWGG 2 cut(s) 369, 922
EcoRV GATATC 1 cut(s) 1144
EcoT14I CCWWGG 1 cut(s) 383
ErhI CCWWGG 1 cut(s) 383
FaeI CATG 4 cut(s) 64, 349, 841, 1220
FalI AAGNNNNNCTT 2 cut(s) 180, 212
FaqI GGGAC 3 cut(s) 224, 409, 816
FatI CATG 4 cut(s) 60, 345, 837, 1216
FauI CCCGC 1 cut(s) 994
FbaI TGATCA 1 cut(s) 1213
FblI GTMKAC 1 cut(s) 268
Fnu4HI GCNGC 2 cut(s) 10, 560
FokI GGATG 4 cut(s) 85, 368, 939, 1031
Fsp4HI GCNGC 2 cut(s) 10, 560
FspBI CTAG 5 cut(s) 126, 335, 639, 821, 1092
GlaI GCGC 1 cut(s) 401
GluI GCNGC 2 cut(s) 10, 560
GsaI CCCAGC 2 cut(s) 1026, 1110
HaeIII GGCC 2 cut(s) 5, 893
HapII CCGG 1 cut(s) 440
HhaI GCGC 1 cut(s) 402
Hin1II CATG 4 cut(s) 64, 349, 841, 1220
Hin6I GCGC 1 cut(s) 400
HinP1I GCGC 1 cut(s) 400
HinfI GANTC 3 cut(s) 237, 458, 663
HpaII CCGG 1 cut(s) 440
HphI GGTGA 2 cut(s) 912, 1272
Hpy166II GTNNAC 3 cut(s) 269, 361, 1280
Hpy188I TCNGA 3 cut(s) 416, 554, 880
Hpy188III TCNNGA 2 cut(s) 613, 862
Hpy8I GTNNAC 3 cut(s) 269, 361, 1280
HpyAV CCTTC 2 cut(s) 927, 1094
HpyCH4III ACNGT 4 cut(s) 115, 298, 380, 1293
HpyCH4IV ACGT 1 cut(s) 30
HpyCH4V TGCA 5 cut(s) 9, 20, 139, 627, 1064
HpyF10VI GCNNNNNNNGC 1 cut(s) 817
HpyF3I CTNAG 5 cut(s) 287, 575, 762, 879, 888
HpySE526I ACGT 1 cut(s) 30
Hsp92II CATG 4 cut(s) 64, 349, 841, 1220
HspAI GCGC 1 cut(s) 400
KpnI GGTACC 1 cut(s) 39
Ksp22I TGATCA 1 cut(s) 1213
Kzo9I GATC 7 cut(s) 80, 547, 579, 754, 904, 1183, 1213
LguI GCTCTTC 1 cut(s) 1062
LmnI GCTCC 2 cut(s) 619, 1103
Lsp1109I GCAGC 1 cut(s) 21
LweI GCATC 1 cut(s) 1009
MaeI CTAG 5 cut(s) 126, 335, 639, 821, 1092
MaeII ACGT 1 cut(s) 30
MaeIII GTNAC 2 cut(s) 1010, 1085
MalI GATC 7 cut(s) 82, 549, 581, 756, 906, 1185, 1215
MboI GATC 7 cut(s) 80, 547, 579, 754, 904, 1183, 1213
MboII GAAGA 6 cut(s) 259, 429, 526, 1079, 1119, 1122
MflI RGATCY 1 cut(s) 579
MhlI GDGCHC 1 cut(s) 1074
MluCI AATT 7 cut(s) 45, 338, 430, 514, 543, 1123, 1176
MlyI GAGTC 2 cut(s) 246, 467
MmeI TCCRAC 2 cut(s) 815, 1265
MroXI GAANNNNTTC 1 cut(s) 786
MseI TTAA 4 cut(s) 105, 305, 1136, 1152
MslI CAYNNNNRTG 1 cut(s) 925
MspI CCGG 1 cut(s) 440
MspR9I CCNGG 3 cut(s) 371, 440, 924
MvaI CCWGG 2 cut(s) 371, 924
MwoI GCNNNNNNNGC 1 cut(s) 817
NciI CCSGG 1 cut(s) 440
NdeII GATC 7 cut(s) 80, 547, 579, 754, 904, 1183, 1213
NlaIII CATG 4 cut(s) 64, 349, 841, 1220
NlaIV GGNNCC 4 cut(s) 37, 425, 804, 885
NmuCI GTSAC 1 cut(s) 1085
NspI RCATGY 1 cut(s) 64
NspV TTCGAA 1 cut(s) 681
PaeR7I CTCGAG 1 cut(s) 1160
PciI ACATGT 1 cut(s) 60
PciSI GCTCTTC 1 cut(s) 1062
PdmI GAANNNNTTC 1 cut(s) 786
PfeI GAWTC 1 cut(s) 663
PflFI GACNNNGTC 1 cut(s) 440
PfoI TCCNGGA 1 cut(s) 369
PkrI GCNGC 2 cut(s) 11, 561
PleI GAGTC 2 cut(s) 245, 466
PpsI GAGTC 2 cut(s) 245, 466
Ppu21I YACGTR 1 cut(s) 31
PscI ACATGT 1 cut(s) 60
Psp6I CCWGG 2 cut(s) 369, 922
PspFI CCCAGC 2 cut(s) 1022, 1106
PspGI CCWGG 2 cut(s) 369, 922
PspN4I GGNNCC 4 cut(s) 37, 425, 804, 885
PspPI GGNCC 3 cut(s) 423, 803, 937
PspXI VCTCGAGB 1 cut(s) 1160
PstI CTGCAG 2 cut(s) 11, 1066
PsuI RGATCY 1 cut(s) 579
PsyI GACNNNGTC 1 cut(s) 440
RsaI GTAC 6 cut(s) 37, 360, 499, 845, 996, 1028
RsaNI GTAC 6 cut(s) 36, 359, 498, 844, 995, 1027
RseI CAYNNNNRTG 1 cut(s) 925
SapI GCTCTTC 1 cut(s) 1062
SaqAI TTAA 4 cut(s) 105, 305, 1136, 1152
SatI GCNGC 2 cut(s) 10, 560
Sau3AI GATC 7 cut(s) 80, 547, 579, 754, 904, 1183, 1213
Sau96I GGNCC 3 cut(s) 423, 803, 937
SchI GAGTC 2 cut(s) 246, 467
ScrFI CCNGG 3 cut(s) 371, 440, 924
SduI GDGCHC 1 cut(s) 1074
SfaNI GCATC 1 cut(s) 1009
SfcI CTRYAG 3 cut(s) 7, 1062, 1292
Sfr274I CTCGAG 1 cut(s) 1160
SfuI TTCGAA 1 cut(s) 681
SinI GGWCC 3 cut(s) 423, 803, 937
SlaI CTCGAG 1 cut(s) 1160
SmiMI CAYNNNNRTG 1 cut(s) 925
SmlI CTYRAG 2 cut(s) 815, 1160
SmoI CTYRAG 2 cut(s) 815, 1160
SnaBI TACGTA 1 cut(s) 31
Sse9I AATT 7 cut(s) 45, 338, 430, 514, 543, 1123, 1176
SsiI CCGC 2 cut(s) 560, 1001
SspI AATATT 1 cut(s) 778
SspMI CTAG 5 cut(s) 126, 335, 639, 821, 1092
StyD4I CCNGG 3 cut(s) 369, 438, 922
StyI CCWWGG 1 cut(s) 383
TaaI ACNGT 4 cut(s) 115, 298, 380, 1293
TaiI ACGT 1 cut(s) 33
TaqI TCGA 5 cut(s) 435, 681, 757, 767, 1161
TasI AATT 7 cut(s) 45, 338, 430, 514, 543, 1123, 1176
TatI WGTACW 2 cut(s) 358, 843
TauI GCSGC 1 cut(s) 562
TfiI GAWTC 1 cut(s) 663
Tru1I TTAA 4 cut(s) 105, 305, 1136, 1152
Tru9I TTAA 4 cut(s) 105, 305, 1136, 1152
TscAI CASTG 6 cut(s) 118, 146, 249, 301, 634, 1102
TseFI GTSAC 1 cut(s) 1085
TseI GCWGC 1 cut(s) 9
Tsp45I GTSAC 1 cut(s) 1085
TspDTI ATGAA 4 cut(s) 108, 162, 1107, 1122
TspGWI ACGGA 1 cut(s) 708
TspRI CASTG 6 cut(s) 118, 146, 249, 301, 634, 1102
Tth111I GACNNNGTC 1 cut(s) 440
VpaK11BI GGWCC 3 cut(s) 423, 803, 937
XagI CCTNNNNNAGG 1 cut(s) 921
XapI RAATTY 3 cut(s) 338, 430, 1176
XceI RCATGY 1 cut(s) 64
XhoI CTCGAG 1 cut(s) 1160
XmiI GTMKAC 1 cut(s) 268
XmnI GAANNNNTTC 1 cut(s) 786
XspI CTAG 5 cut(s) 126, 335, 639, 821, 1092
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.