FvH4_1g27953

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000182
Physical Location & Seq
Reverse (-)
19663309 .. 19665100
1792 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g27953.t1

Sequence Viewer

Length: 1665 bp
ATGGCCCTCTCTCCCAATGCTTGCTTTCATGCAAACAACGTTAGAATGCAATCCCCTCCAGTCTTTAACCCTTACCCAAGACCAGCCCCTAATGAACCTTCCTTCCTTGCTAATGTTGGCAATGCAAGGGTTGTTGTTCAACATGGGGAGACTCATGTCTTCCTTCACCGCTCAATCCCTTCCCACAAGGAGCACTTGGCCAAGTTCTGCTTGGTGGCAAAAGTGTTTGGTAAGAAAGTTCCAGTTCGTAAGATCATTAGGAAATGCCGCCTTCTCTGGGCGAATCTTATTGGCACTATTAAGATGAGCCAGCTTGTGAATGGGTGGTTTGCCCTTGAGCTGACTCATGTGGAGGATGTTGATTTCATCTTGGAGCATAGGCCTTGGTTTGTGAAAGGCAGGATTTTTCATATCAGAAGGTGGTCCCTTAGTTTCCATTCTGCCACTGCGGAGATTGAGACCCTGATCATTTGGATTCGACTTCCCAATTTCCCGCTACATCACTGGTCCCCAGAAGGGATTGAAGCTACGGTGGGTGTGTTGGGCCGCTTTATCAAGGTTGATGACAGAACTCTTAACGGAGACAACTACATTTTTGCTAGATTGAAGATGGAGATAGATCTTCGTACCCCCCTCAAAAGAATCTTAGTGATCAGAGATGAAGAGGAGGAAGACATGTCCATTCCCTGGAACCTAAGGATTGACCCTGCTAGGGTTCTAGTGTCATATGAAGTAATTTTCGAGGTATGCTTTGAATGTGGAAGCCATCGCCACAAGATTAGAAACAGTCCTTTCAGATTGGTGGAGAATCACTGCTTCGTACTTGTTGATCGCGAGGAATCTGATGCTGATGTGGAACCTGTTGGTGTTGAGGCGAATCCACTGATAAGAGACTTTGTCTCTAAAATAGTTATGGCTTACTTCCCACTACCTGTTGATGAAAACCAAGATCTTAATGGTCCGGAGGTTCCACCTGTGGACCTAAACCCTCCCTCCCCAGGATGGACCACTGTCCAAAAGGCGGCTAAGGGAAAGGAAAAGGTGGTGCTTGGTAACCCCAAGAATGGTGATATGAGATTCAATAGAGGCGTTGGCTCAAGTAGGATGGTGAGTCGCGGGAAAAGTTATAGTGATGCTGATAAAGGGACTGGTGTTGTTATCATTAGAGGCACTTCGGAGAATACTGATGCTGAAGATTACTTGAGTGGGGATGAAGGGGTGAGTTCTGCTACCAATTCTTCCTCTAACTCTTGTTTGGTGAATTTTTCTTTTGAAGATGTGAAAAATATTGCTAAACTGTTTGGTGTGTATAACTCACCCTATCCCACTACTGCCCTTAAGGAGATCTACTGTCCCACATACCCCCTTGATCTAAATGATATTTTTCCTGATATAAATATGCAGTTTGAAAATTATCATGACTTAGGAATTACGATGGCTGAGGGTACTTTACCTAAGCAGCATGATGAGGTCATGTATCAAGAGAGTGTGGCTCCTTTGGTGGCTGGTAGCCCTGGAGCTAACTCTCTGGTGGCAAGAAAGGTTTCTGGTGATGACAAGGGATTTAAGAGCCCAAGGAAGAGAACCCGTGACATGTTGGTTGAAGCTGAAGTTGTTGAGATGGGGGGGCAGCTCCCCAGATTCAGGCATCTGATGATATTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-RVT

Protein Analysis

555

Amino Acids

62.51

Weight (kDa)

6.54

Isoelectric Point (pI)

42.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 67 - 146 7.4e-12 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000182)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21471 FvH4_1g27953 FvH4_1g28801 FvH4_2g14522 FvH4_3g04280 FvH4_3g28251 FvH4_4g07491 FvH4_4g30262
malus_domestica MD10G1046400.v1.1 MD10G1126900.v1.1 MD11G1236100.v1.1
prunus_persica Prupe.1G148300_v2.0.a1 Prupe.2G036800_v2.0.a1 Prupe.8G054600_v2.0.a1 Prupe.8G054700_v2.0.a1
pyrus_communis pycom05g05520 pycom08g11160 pycom13g29480
rosa_chinensis RchiOBHm_Chr7g0182921 RchiOBHm_Chr7g0230111
rosa_laevigata RLG00000000536 RLG00000001385 RLG00000001492 RLG00000002640 RLG00000003082 RLG00000005042 RLG00000007254 RLG00000007773 RLG00000008594 RLG00000009508 RLG00000010355 RLG00000013369 RLG00000014370 RLG00000014371 RLG00000018745 RLG00000020268 RLG00000020832 RLG00000022569 RLG00000028073 RLG00000028388 RLG00000028677 RLG00000035645
rosa_multiflora Rmu_co8277499.1_g000001 Rmu_co8500999.1_g000001 Rmu_sc0000014.1_g000025 Rmu_sc0000103.1_g000003 Rmu_sc0000168.1_g000019 Rmu_sc0000283.1_g000006 Rmu_sc0000693.1_g000080 Rmu_sc0000997.1_g000005 Rmu_sc0001228.1_g000005 Rmu_sc0001231.1_g000023 Rmu_sc0002833.1_g000037 Rmu_sc0002869.1_g000015 Rmu_sc0003545.1_g000003 Rmu_sc0003693.1_g000028 Rmu_sc0004000.1_g000022 Rmu_sc0004454.1_g000007 Rmu_sc0004976.1_g000036 Rmu_sc0005014.1_g000013 Rmu_sc0005046.1_g000013 Rmu_sc0005063.1_g000009 Rmu_sc0005652.1_g000002 Rmu_sc0005697.1_g000008 Rmu_sc0006989.1_g000014 Rmu_sc0008957.1_g000003 Rmu_sc0011659.1_g000001 Rmu_sc0027477.1_g000001 Rmu_ssc0000387.1_g000021
rosa_roxburghii Rroxscaffold_1G00020860 Rroxscaffold_1G00035780 Rroxscaffold_1G00051370 Rroxscaffold_2G00101730 Rroxscaffold_3G00230130 Rroxscaffold_4G00280070 Rroxscaffold_4G00281160 Rroxscaffold_4G00318780 Rroxscaffold_5G00341570 Rroxscaffold_5G00341580 Rroxscaffold_7G00191230 Rroxscaffold_7G00195880 Rroxscaffold_7G00195890 Rroxscaffold_7G00209080 Rroxscaffold_7G00209090
rosa_rugosa Rorug02G0170400 Rorug03G0234500 Rorug04G0045200 Rorug07G0191000
rosa_samantha Rh1AG012200 Rh1AG012300 Rh1AG021700 Rh1AG033800 Rh1AG033900 Rh1AG048100 Rh1AG087000 Rh1AG168600 Rh1CG004600 Rh2BG192700 Rh2BG200800 Rh2BG310200 Rh2BG356900 Rh2BG377900 Rh2BG378000 Rh2CG356300 Rh2DG394800 Rh3AG199000 Rh3AG258700 Rh3AG258800 Rh3AG324400 Rh3BG202300 Rh3BG202400 Rh3BG228800 Rh3BG318800 Rh3BG360400 Rh3BG368300 Rh3BG373700 Rh4AG071400 Rh4AG153700 Rh4AG224300 Rh4AG224400 Rh4CG044000 Rh4CG077200 Rh4CG077300 Rh4CG238700 Rh4CG238800 Rh4CG238900 Rh5BG367100 Rh5BG379500 Rh5BG379600 Rh5BG396700 Rh5BG412900 Rh5DG427200 Rh6AG015200 Rh6AG015300 Rh6AG122800 Rh6AG175600 Rh6AG187700 Rh6AG187800 Rh6AG260800 Rh6AG355000 Rh6BG074900 Rh6BG102300 Rh7AG127400 Rh7AG157500 Rh7AG157600 Rh7AG212200 Rh7AG331400 Rh7AG412000 Rh7CG055400 Rh7CG131400 Rh7CG131500 Rh7CG224300 Rh7CG267100 Rh7CG348800
rosa_wichuraiana Rw0G009820 Rw1G000520 Rw1G008820 Rw4G014110 Rw4G019370 Rw4G022440 Rw6G010550 Rw7G001520 Rw7G018400 Rw7G025210 Rw7G027910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 687
AccBSI CCGCTC 1 cut(s) 171
AccII CGCG 2 cut(s) 834, 1116
AccIII TCCGGA 1 cut(s) 961
AciI CCGC 7 cut(s) 169, 268, 449, 494, 547, 1022, 1116
AclI AACGTT 1 cut(s) 39
AcoI YGGCCR 1 cut(s) 198
AcsI RAATTY 1 cut(s) 1261
AcuI CTGAAG 2 cut(s) 1212, 1629
AfaI GTAC 3 cut(s) 628, 822, 1447
AfiI CCNNNNNNNGG 9 cut(s) 277, 516, 687, 712, 998, 1002, 1021, 1064, 1644
AflII CTTAAG 1 cut(s) 1337
AflIII ACRYGT 2 cut(s) 675, 1593
AgsI TTSAA 8 cut(s) 140, 524, 607, 755, 1081, 1274, 1409, 1604
AjnI CCWGG 3 cut(s) 686, 997, 1513
AloI GAACNNNNNNTCC 2 cut(s) 87, 119
AluBI AGCT 6 cut(s) 313, 340, 527, 1520, 1607, 1633
AluI AGCT 6 cut(s) 313, 340, 527, 1520, 1607, 1633
Alw21I GWGCWC 1 cut(s) 195
Alw26I GTCTC 5 cut(s) 143, 452, 576, 885, 904
Aor13HI TCCGGA 1 cut(s) 961
AoxI GGCC 4 cut(s) 3, 198, 380, 544
ApeKI GCWGC 2 cut(s) 1459, 1630
ApoI RAATTY 1 cut(s) 1261
Asp700I GAANNNNTTC 1 cut(s) 1543
AspS9I GGNCC 7 cut(s) 4, 423, 507, 544, 959, 979, 1005
AsuHPI GGTGA 7 cut(s) 158, 1079, 1120, 1231, 1270, 1308, 1562
AvaII GGWCC 5 cut(s) 423, 507, 959, 979, 1005
AxyI CCTNAGG 1 cut(s) 695
BalI TGGCCA 1 cut(s) 200
BanII GRGCYC 1 cut(s) 1574
BbsI GAAGAC 2 cut(s) 151, 678
Bbv12I GWGCWC 1 cut(s) 195
BbvCI CCTCAGC 1 cut(s) 1440
BbvI GCAGC 2 cut(s) 1471, 1642
BccI CCATC 6 cut(s) 604, 774, 996, 1099, 1429, 1615
BciT130I CCWGG 3 cut(s) 688, 999, 1515
BclI TGATCA 2 cut(s) 465, 651
BcoDI GTCTC 5 cut(s) 143, 452, 576, 885, 904
BfaI CTAG 3 cut(s) 600, 711, 719
BfrI CTTAAG 1 cut(s) 1337
BglII AGATCT 3 cut(s) 619, 949, 1344
BisI GCNGC 5 cut(s) 268, 547, 1023, 1460, 1631
BlsI GCNGC 5 cut(s) 269, 548, 1024, 1461, 1632
Bme1390I CCNGG 3 cut(s) 688, 999, 1515
Bme18I GGWCC 5 cut(s) 423, 507, 959, 979, 1005
BmgT120I GGNCC 7 cut(s) 4, 423, 507, 544, 959, 979, 1005
BmiI GGNNCC 6 cut(s) 425, 509, 692, 858, 969, 1494
BmrFI CCNGG 3 cut(s) 688, 999, 1515
BmsI GCATC 4 cut(s) 835, 1123, 1177, 1657
BoxI GACNNNNGTC 2 cut(s) 155, 1010
BpiI GAAGAC 2 cut(s) 151, 678
BplI GAGNNNNNCTC 2 cut(s) 1477, 1509
BpmI CTGGAG 2 cut(s) 42, 1536
Bpu10I CCTNAGC 3 cut(s) 1026, 1440, 1455
BpuEI CTTGAG 3 cut(s) 356, 1081, 1222
BsaI GGTCTC 1 cut(s) 452
BsaJI CCNNGG 5 cut(s) 383, 686, 997, 1513, 1574
BsaWI WCCGGW 1 cut(s) 961
BsaXI ACNNNNNCTCC 2 cut(s) 977, 1007
Bsc4I CCNNNNNNNGG 9 cut(s) 277, 516, 687, 712, 998, 1002, 1021, 1064, 1644
Bse1I ACTGG 4 cut(s) 59, 242, 509, 1153
Bse21I CCTNAGG 1 cut(s) 695
Bse3DI GCAATG 1 cut(s) 127
BseAI TCCGGA 1 cut(s) 961
BseBI CCWGG 3 cut(s) 688, 999, 1515
BseDI CCNNGG 5 cut(s) 383, 686, 997, 1513, 1574
BseGI GGATG 4 cut(s) 361, 1007, 1110, 1216
BseLI CCNNNNNNNGG 9 cut(s) 277, 516, 687, 712, 998, 1002, 1021, 1064, 1644
BseMI GCAATG 1 cut(s) 127
BseMII CTCAG 1 cut(s) 1431
BseNI ACTGG 4 cut(s) 59, 242, 509, 1153
BseRI GAGGAG 1 cut(s) 680
BseXI GCAGC 2 cut(s) 1471, 1642
Bsh1236I CGCG 2 cut(s) 834, 1116
BshFI GGCC 4 cut(s) 5, 200, 382, 546
BsiHKAI GWGCWC 1 cut(s) 195
BsiSI CCGG 1 cut(s) 962
BslFI GGGAC 4 cut(s) 409, 493, 1159, 1338
BslI CCNNNNNNNGG 9 cut(s) 277, 516, 687, 712, 998, 1002, 1021, 1064, 1644
BsmAI GTCTC 5 cut(s) 143, 452, 576, 885, 904
BsmFI GGGAC 4 cut(s) 409, 493, 1159, 1338
BsmI GAATGC 1 cut(s) 51
BsnI GGCC 4 cut(s) 5, 200, 382, 546
Bso31I GGTCTC 1 cut(s) 452
Bsp1286I GDGCHC 2 cut(s) 195, 1574
Bsp13I TCCGGA 1 cut(s) 961
Bsp143I GATC 8 cut(s) 252, 465, 619, 651, 829, 949, 1344, 1369
Bsp68I TCGCGA 1 cut(s) 834
BspACI CCGC 7 cut(s) 169, 268, 449, 494, 547, 1022, 1116
BspANI GGCC 4 cut(s) 5, 200, 382, 546
BspCNI CTCAG 1 cut(s) 1432
BspEI TCCGGA 1 cut(s) 961
BspFNI CGCG 2 cut(s) 834, 1116
BspHI TCATGA 1 cut(s) 1417
BspLI GGNNCC 6 cut(s) 425, 509, 692, 858, 969, 1494
BspTI CTTAAG 1 cut(s) 1337
BspTNI GGTCTC 1 cut(s) 452
BsrBI CCGCTC 1 cut(s) 171
BsrDI GCAATG 1 cut(s) 127
BsrI ACTGG 4 cut(s) 59, 242, 509, 1153
BssECI CCNNGG 5 cut(s) 383, 686, 997, 1513, 1574
BssMI GATC 8 cut(s) 252, 465, 619, 651, 829, 949, 1344, 1369
BssT1I CCWWGG 2 cut(s) 383, 1574
Bst2UI CCWGG 3 cut(s) 688, 999, 1515
Bst4CI ACNGT 5 cut(s) 532, 788, 1012, 1299, 1352
Bst6I CTCTTC 2 cut(s) 657, 1574
BstAFI CTTAAG 1 cut(s) 1337
BstC8I GCNNGC 2 cut(s) 22, 311
BstDEI CTNAG 7 cut(s) 428, 646, 695, 1026, 1423, 1440, 1455
BstEII GGTNACC 1 cut(s) 1052
BstF5I GGATG 4 cut(s) 361, 1007, 1110, 1216
BstFNI CGCG 2 cut(s) 834, 1116
BstKTI GATC 8 cut(s) 255, 468, 622, 654, 832, 952, 1347, 1372
BstMAI GTCTC 5 cut(s) 143, 452, 576, 885, 904
BstMBI GATC 8 cut(s) 252, 465, 619, 651, 829, 949, 1344, 1369
BstNI CCWGG 3 cut(s) 688, 999, 1515
BstNSI RCATGY 2 cut(s) 679, 1597
BstPAI GACNNNNGTC 2 cut(s) 155, 1010
BstPI GGTNACC 1 cut(s) 1052
BstSCI CCNGG 3 cut(s) 686, 997, 1513
BstUI CGCG 2 cut(s) 834, 1116
BstV1I GCAGC 2 cut(s) 1471, 1642
BstV2I GAAGAC 2 cut(s) 151, 678
BstX2I RGATCY 3 cut(s) 619, 949, 1344
BstYI RGATCY 3 cut(s) 619, 949, 1344
Bsu36I CCTNAGG 1 cut(s) 695
BsuRI GGCC 4 cut(s) 5, 200, 382, 546
BtgZI GCGATG 1 cut(s) 752
BtsCI GGATG 4 cut(s) 361, 1007, 1110, 1216
BtsI GCAGTG 2 cut(s) 444, 811
BtsIMutI CAGTG 5 cut(s) 444, 502, 811, 881, 1008
BtuMI TCGCGA 1 cut(s) 834
Cac8I GCNNGC 2 cut(s) 22, 311
CciI TCATGA 1 cut(s) 1417
Cfr13I GGNCC 7 cut(s) 4, 423, 507, 544, 959, 979, 1005
Csp6I GTAC 3 cut(s) 627, 821, 1446
CviAII CATG 9 cut(s) 29, 143, 155, 347, 676, 1418, 1463, 1474, 1594
CviQI GTAC 3 cut(s) 627, 821, 1446
DdeI CTNAG 7 cut(s) 428, 646, 695, 1026, 1423, 1440, 1455
DpnI GATC 8 cut(s) 254, 467, 621, 653, 831, 951, 1346, 1371
DpnII GATC 8 cut(s) 252, 465, 619, 651, 829, 949, 1344, 1369
EaeI YGGCCR 1 cut(s) 198
Eam1104I CTCTTC 2 cut(s) 657, 1574
EarI CTCTTC 2 cut(s) 657, 1574
Eco130I CCWWGG 2 cut(s) 383, 1574
Eco147I AGGCCT 1 cut(s) 382
Eco24I GRGCYC 1 cut(s) 1574
Eco31I GGTCTC 1 cut(s) 452
Eco47I GGWCC 5 cut(s) 423, 507, 959, 979, 1005
Eco57I CTGAAG 2 cut(s) 1212, 1629
Eco81I CCTNAGG 1 cut(s) 695
Eco91I GGTNACC 1 cut(s) 1052
EcoO65I GGTNACC 1 cut(s) 1052
EcoRII CCWGG 3 cut(s) 686, 997, 1513
EcoT14I CCWWGG 2 cut(s) 383, 1574
EcoT38I GRGCYC 1 cut(s) 1574
ErhI CCWWGG 2 cut(s) 383, 1574
FaeI CATG 9 cut(s) 32, 146, 158, 350, 679, 1421, 1466, 1477, 1597
FalI AAGNNNNNCTT 4 cut(s) 179, 211, 194, 226
FaqI GGGAC 4 cut(s) 409, 493, 1159, 1338
FatI CATG 9 cut(s) 28, 142, 154, 346, 675, 1417, 1462, 1473, 1593
FauI CCCGC 2 cut(s) 501, 1109
FauNDI CATATG 1 cut(s) 727
FbaI TGATCA 2 cut(s) 465, 651
Fnu4HI GCNGC 5 cut(s) 268, 547, 1023, 1460, 1631
FokI GGATG 4 cut(s) 368, 1014, 1117, 1223
FriOI GRGCYC 1 cut(s) 1574
Fsp4HI GCNGC 5 cut(s) 268, 547, 1023, 1460, 1631
FspBI CTAG 3 cut(s) 600, 711, 719
GluI GCNGC 5 cut(s) 268, 547, 1023, 1460, 1631
GsuI CTGGAG 2 cut(s) 42, 1536
HaeIII GGCC 4 cut(s) 5, 200, 382, 546
HapII CCGG 1 cut(s) 962
Hin1II CATG 9 cut(s) 32, 146, 158, 350, 679, 1421, 1466, 1477, 1597
HpaII CCGG 1 cut(s) 962
HphI GGTGA 7 cut(s) 158, 1079, 1120, 1231, 1270, 1308, 1562
Hpy166II GTNNAC 1 cut(s) 979
Hpy188I TCNGA 6 cut(s) 416, 656, 797, 844, 1177, 1653
Hpy188III TCNNGA 5 cut(s) 833, 962, 1388, 1418, 1481
Hpy8I GTNNAC 1 cut(s) 979
HpyAV CCTTC 8 cut(s) 108, 112, 173, 189, 281, 411, 509, 1208
HpyCH4III ACNGT 5 cut(s) 532, 788, 1012, 1299, 1352
HpyCH4IV ACGT 1 cut(s) 39
HpyCH4V TGCA 4 cut(s) 32, 49, 125, 1402
HpyF3I CTNAG 7 cut(s) 428, 646, 695, 1026, 1423, 1440, 1455
HpySE526I ACGT 1 cut(s) 39
Hsp92II CATG 9 cut(s) 32, 146, 158, 350, 679, 1421, 1466, 1477, 1597
Kpn2I TCCGGA 1 cut(s) 961
Ksp22I TGATCA 2 cut(s) 465, 651
Kzo9I GATC 8 cut(s) 252, 465, 619, 651, 829, 949, 1344, 1369
LmnI GCTCC 5 cut(s) 190, 373, 1498, 1517, 1638
Lsp1109I GCAGC 2 cut(s) 1471, 1642
LweI GCATC 4 cut(s) 835, 1123, 1177, 1657
MaeI CTAG 3 cut(s) 600, 711, 719
MaeII ACGT 1 cut(s) 39
MaeIII GTNAC 2 cut(s) 1052, 1589
MalI GATC 8 cut(s) 254, 467, 621, 653, 831, 951, 1346, 1371
MbiI CCGCTC 1 cut(s) 171
MboI GATC 8 cut(s) 252, 465, 619, 651, 829, 949, 1344, 1369
MboII GAAGA 9 cut(s) 151, 614, 619, 674, 683, 1205, 1230, 1286, 1591
MflI RGATCY 3 cut(s) 619, 949, 1344
MhlI GDGCHC 2 cut(s) 195, 1574
MlsI TGGCCA 1 cut(s) 200
MluCI AATT 6 cut(s) 487, 735, 1234, 1261, 1411, 1428
MluNI TGGCCA 1 cut(s) 200
MlyI GAGTC 3 cut(s) 145, 337, 1120
Mox20I TGGCCA 1 cut(s) 200
MroI TCCGGA 1 cut(s) 961
MroXI GAANNNNTTC 1 cut(s) 1543
MscI TGGCCA 1 cut(s) 200
MseI TTAA 7 cut(s) 66, 300, 576, 954, 1338, 1566, 1663
Msp20I TGGCCA 1 cut(s) 200
MspCI CTTAAG 1 cut(s) 1337
MspI CCGG 1 cut(s) 962
MspR9I CCNGG 3 cut(s) 688, 999, 1515
Mva1269I GAATGC 1 cut(s) 51
MvaI CCWGG 3 cut(s) 688, 999, 1515
MvnI CGCG 2 cut(s) 834, 1116
NdeI CATATG 1 cut(s) 727
NdeII GATC 8 cut(s) 252, 465, 619, 651, 829, 949, 1344, 1369
NlaIII CATG 9 cut(s) 32, 146, 158, 350, 679, 1421, 1466, 1477, 1597
NlaIV GGNNCC 6 cut(s) 425, 509, 692, 858, 969, 1494
NmuCI GTSAC 1 cut(s) 1589
NruI TCGCGA 1 cut(s) 834
NspI RCATGY 2 cut(s) 679, 1597
PagI TCATGA 1 cut(s) 1417
PceI AGGCCT 1 cut(s) 382
PciI ACATGT 2 cut(s) 675, 1593
PctI GAATGC 1 cut(s) 51
PdmI GAANNNNTTC 1 cut(s) 1543
PfeI GAWTC 8 cut(s) 283, 475, 642, 808, 839, 877, 1077, 1641
PflFI GACNNNGTC 1 cut(s) 896
PflMI CCANNNNNTGG 1 cut(s) 687
PkrI GCNGC 5 cut(s) 269, 548, 1024, 1461, 1632
PleI GAGTC 3 cut(s) 145, 337, 1119
PpsI GAGTC 3 cut(s) 145, 337, 1119
PscI ACATGT 2 cut(s) 675, 1593
PshAI GACNNNNGTC 2 cut(s) 155, 1010
Psp1406I AACGTT 1 cut(s) 39
Psp6I CCWGG 3 cut(s) 686, 997, 1513
PspEI GGTNACC 1 cut(s) 1052
PspGI CCWGG 3 cut(s) 686, 997, 1513
PspN4I GGNNCC 6 cut(s) 425, 509, 692, 858, 969, 1494
PspPI GGNCC 7 cut(s) 4, 423, 507, 544, 959, 979, 1005
PsuI RGATCY 3 cut(s) 619, 949, 1344
PsyI GACNNNGTC 1 cut(s) 896
RruI TCGCGA 1 cut(s) 834
RsaI GTAC 3 cut(s) 628, 822, 1447
RsaNI GTAC 3 cut(s) 627, 821, 1446
SaqAI TTAA 7 cut(s) 66, 300, 576, 954, 1338, 1566, 1663
SatI GCNGC 5 cut(s) 268, 547, 1023, 1460, 1631
Sau3AI GATC 8 cut(s) 252, 465, 619, 651, 829, 949, 1344, 1369
Sau96I GGNCC 7 cut(s) 4, 423, 507, 544, 959, 979, 1005
SchI GAGTC 3 cut(s) 145, 337, 1120
ScrFI CCNGG 3 cut(s) 688, 999, 1515
SduI GDGCHC 2 cut(s) 195, 1574
SfaNI GCATC 4 cut(s) 835, 1123, 1177, 1657
SinI GGWCC 5 cut(s) 423, 507, 959, 979, 1005
SmlI CTYRAG 4 cut(s) 335, 1096, 1201, 1337
SmoI CTYRAG 4 cut(s) 335, 1096, 1201, 1337
Sse9I AATT 6 cut(s) 487, 735, 1234, 1261, 1411, 1428
SseBI AGGCCT 1 cut(s) 382
SsiI CCGC 7 cut(s) 169, 268, 449, 494, 547, 1022, 1116
SspI AATATT 1 cut(s) 1288
SspMI CTAG 3 cut(s) 600, 711, 719
StuI AGGCCT 1 cut(s) 382
StyD4I CCNGG 3 cut(s) 686, 997, 1513
StyI CCWWGG 2 cut(s) 383, 1574
TaaI ACNGT 5 cut(s) 532, 788, 1012, 1299, 1352
TaiI ACGT 1 cut(s) 42
TaqI TCGA 2 cut(s) 478, 741
TasI AATT 6 cut(s) 487, 735, 1234, 1261, 1411, 1428
TauI GCSGC 3 cut(s) 270, 549, 1025
TfiI GAWTC 8 cut(s) 283, 475, 642, 808, 839, 877, 1077, 1641
Tru1I TTAA 7 cut(s) 66, 300, 576, 954, 1338, 1566, 1663
Tru9I TTAA 7 cut(s) 66, 300, 576, 954, 1338, 1566, 1663
TscAI CASTG 5 cut(s) 451, 509, 818, 888, 1015
TseFI GTSAC 1 cut(s) 1589
TseI GCWGC 2 cut(s) 1459, 1630
Tsp45I GTSAC 1 cut(s) 1589
TspDTI ATGAA 8 cut(s) 17, 108, 355, 398, 675, 744, 954, 1227
TspGWI ACGGA 1 cut(s) 594
TspRI CASTG 5 cut(s) 451, 509, 818, 888, 1015
Tth111I GACNNNGTC 1 cut(s) 896
Van91I CCANNNNNTGG 1 cut(s) 687
Vha464I CTTAAG 1 cut(s) 1337
VpaK11BI GGWCC 5 cut(s) 423, 507, 959, 979, 1005
XapI RAATTY 1 cut(s) 1261
XceI RCATGY 2 cut(s) 679, 1597
XcmI CCANNNNNNNNNTGG 3 cut(s) 208, 317, 953
XmnI GAANNNNTTC 1 cut(s) 1543
XspI CTAG 3 cut(s) 600, 711, 719
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.