Rmu_sc0000168.1_g000019

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000168.1
OG0000182
Physical Location & Seq
Forward (+)
92929 .. 95127
2199 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000168.1_g000019.1.cds

Sequence Viewer

Length: 2199 bp
atggaaacttggctgtgggaatgcgccccattcgcccccttttttggggatttagggtttccaatttcgattcgttccttcgtaatcacccttgttagctggtttttctggacaagcacttggagggacttatggccgggaatcagtttctcgtcctcccaggcaaaggatgactctagtatatgttgcaattgcagatatgggcaatacctagagcacgagggcagcgcaaatcataacctctattccaagaggctgtggacaatgctggttatcgaggttgggcgagattcacggtttgtttctgcccactggattttttactttttgtggatcactatgactggagcgctttgtcttccgactcaagcatgcaagctgcgggatcctctgcctcgattctttcagggagcatatcttatccctttcttacttagatcttatcctatttctctgtgcaatgattgctttgccttgattttcattgggtttgggattctcctcgttactttttggtttttgagtttcgttgggttttcaaaactgctacttttatatcatttacgtgttgttttgtttgcgttttctagattcctagatgattttctaacttcccgagtaactgtcttatgcatgcgagacctggtggtctccagatttaagtgttccccacgcaccgggaggtgtataaatcggctccacagcttggttattcactccatgcttacctacctgagtttttcctttatgcctttgttaccaatggctttcaattctgtttcccaagctaatttggcctctagcagtcgtcgtcctaccccagttactcagtattttccttttccccgaaaccaaaatacctctgactctatccctgttgttattggggataataccatcaatattgagagatttgctgtccaaattgctatgccacctcctccacaggatttcgatagccactattctagattctgtctagtaggaaagatcttcggccctctggtctcccctgacattgtcttcgcaaagtgtcaagaactctggaataatctcaaaggggctatcaacatgagcagattacccaataattggttctgctttgtgtttaataacgaagaagatgtgttgttcatcctcgacaaccgaccttggtacattaggagtcgcctcttccacatccaacgctggagcccggaattcgatgctactgtctcctccattgatcgtctgatcgtatgggtgaggctcccaaatttacctcttccccattggcatgaatcctcgctcaaacacctgggccaataccttggaacttttcttcaagcggatgagtttaccctcaccggtaaaaaaaccatgtttgcccgcatcaagattgaactggacctacgatacccacttcgtaggatggctctggtcaacaaccatgatggtaaaacccctagctttgtcttagtgtcctatgaggttatctttgagatttgttttcgttgtggcctttaccgtcaaagaaaccatgtttgtcctagaagaaatatcaaagacagcttctttatggtcgagagactggagcatgagcaagaggtctatccagctgacatggcaaacagtgagttcatcaaaccactcctgtcaaatgacatttccattattttccctcaacccatgttcagttattatgagccgggtggctttaaggccaataatggtgaccggtctaaaagtaatgcctatggtgacaatgatcctcctgacagccattggagaattgtttctaggagaggtaaggggagaggacagcgctttcccaagaatggtcattggacaccaggccccaattctgatagaccgaaaggcaacaatgttgttcttcctggggtttcattcaaagatgttgctaagggtgaagctaaggctaatcatcatgctatcgctaataggaaacataaggagactgtggtggtttcctctgattcctcccaagaggtggatcagttccttgatgcttttgatcccaagtttggtgatatcgatgctctcctaaaagatgatgttaactttcctgttcctagttcctgtggtgctggtcctatggcaccaagtccaaaaaagagaactaggcagatgttggaaatgatggaaacaagtgactgccagaatattgaatcaacctccaaccaacctgttgtcccatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-RVT

Protein Analysis

732

Amino Acids

84.16

Weight (kDa)

8.79

Isoelectric Point (pI)

49.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000182)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21471 FvH4_1g27953 FvH4_1g28801 FvH4_2g14522 FvH4_3g04280 FvH4_3g28251 FvH4_4g07491 FvH4_4g30262
malus_domestica MD10G1046400.v1.1 MD10G1126900.v1.1 MD11G1236100.v1.1
prunus_persica Prupe.1G148300_v2.0.a1 Prupe.2G036800_v2.0.a1 Prupe.8G054600_v2.0.a1 Prupe.8G054700_v2.0.a1
pyrus_communis pycom05g05520 pycom08g11160 pycom13g29480
rosa_chinensis RchiOBHm_Chr7g0182921 RchiOBHm_Chr7g0230111
rosa_laevigata RLG00000000536 RLG00000001385 RLG00000001492 RLG00000002640 RLG00000003082 RLG00000005042 RLG00000007254 RLG00000007773 RLG00000008594 RLG00000009508 RLG00000010355 RLG00000013369 RLG00000014370 RLG00000014371 RLG00000018745 RLG00000020268 RLG00000020832 RLG00000022569 RLG00000028073 RLG00000028388 RLG00000028677 RLG00000035645
rosa_multiflora Rmu_co8277499.1_g000001 Rmu_co8500999.1_g000001 Rmu_sc0000014.1_g000025 Rmu_sc0000103.1_g000003 Rmu_sc0000168.1_g000019 Rmu_sc0000283.1_g000006 Rmu_sc0000693.1_g000080 Rmu_sc0000997.1_g000005 Rmu_sc0001228.1_g000005 Rmu_sc0001231.1_g000023 Rmu_sc0002833.1_g000037 Rmu_sc0002869.1_g000015 Rmu_sc0003545.1_g000003 Rmu_sc0003693.1_g000028 Rmu_sc0004000.1_g000022 Rmu_sc0004454.1_g000007 Rmu_sc0004976.1_g000036 Rmu_sc0005014.1_g000013 Rmu_sc0005046.1_g000013 Rmu_sc0005063.1_g000009 Rmu_sc0005652.1_g000002 Rmu_sc0005697.1_g000008 Rmu_sc0006989.1_g000014 Rmu_sc0008957.1_g000003 Rmu_sc0011659.1_g000001 Rmu_sc0027477.1_g000001 Rmu_ssc0000387.1_g000021
rosa_roxburghii Rroxscaffold_1G00020860 Rroxscaffold_1G00035780 Rroxscaffold_1G00051370 Rroxscaffold_2G00101730 Rroxscaffold_3G00230130 Rroxscaffold_4G00280070 Rroxscaffold_4G00281160 Rroxscaffold_4G00318780 Rroxscaffold_5G00341570 Rroxscaffold_5G00341580 Rroxscaffold_7G00191230 Rroxscaffold_7G00195880 Rroxscaffold_7G00195890 Rroxscaffold_7G00209080 Rroxscaffold_7G00209090
rosa_rugosa Rorug02G0170400 Rorug03G0234500 Rorug04G0045200 Rorug07G0191000
rosa_samantha Rh1AG012200 Rh1AG012300 Rh1AG021700 Rh1AG033800 Rh1AG033900 Rh1AG048100 Rh1AG087000 Rh1AG168600 Rh1CG004600 Rh2BG192700 Rh2BG200800 Rh2BG310200 Rh2BG356900 Rh2BG377900 Rh2BG378000 Rh2CG356300 Rh2DG394800 Rh3AG199000 Rh3AG258700 Rh3AG258800 Rh3AG324400 Rh3BG202300 Rh3BG202400 Rh3BG228800 Rh3BG318800 Rh3BG360400 Rh3BG368300 Rh3BG373700 Rh4AG071400 Rh4AG153700 Rh4AG224300 Rh4AG224400 Rh4CG044000 Rh4CG077200 Rh4CG077300 Rh4CG238700 Rh4CG238800 Rh4CG238900 Rh5BG367100 Rh5BG379500 Rh5BG379600 Rh5BG396700 Rh5BG412900 Rh5DG427200 Rh6AG015200 Rh6AG015300 Rh6AG122800 Rh6AG175600 Rh6AG187700 Rh6AG187800 Rh6AG260800 Rh6AG355000 Rh6BG074900 Rh6BG102300 Rh7AG127400 Rh7AG157500 Rh7AG157600 Rh7AG212200 Rh7AG331400 Rh7AG412000 Rh7CG055400 Rh7CG131400 Rh7CG131500 Rh7CG224300 Rh7CG267100 Rh7CG348800
rosa_wichuraiana Rw0G009820 Rw1G000520 Rw1G008820 Rw4G014110 Rw4G019370 Rw4G022440 Rw6G010550 Rw7G001520 Rw7G018400 Rw7G025210 Rw7G027910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 647
AccB1I GGYRCC 1 cut(s) 2098
AccB7I CCANNNNNTGG 3 cut(s) 706, 1092, 1990
AciI CCGC 3 cut(s) 382, 1328, 1369
AclWI GGATC 6 cut(s) 341, 380, 393, 1742, 2001, 2009
AcoI YGGCCR 1 cut(s) 134
AcsI RAATTY 2 cut(s) 1199, 1255
AfaI GTAC 1 cut(s) 1157
AfeI AGCGCT 2 cut(s) 351, 1805
AfiI CCNNNNNNNGG 9 cut(s) 44, 45, 166, 677, 706, 1092, 1817, 1990, 2024
AflIII ACRYGT 1 cut(s) 565
AgeI ACCGGT 2 cut(s) 1346, 1716
AgsI TTSAA 6 cut(s) 540, 772, 1325, 1382, 1891, 2168
AjnI CCWGG 5 cut(s) 159, 642, 1296, 1831, 1876
AjuI GAANNNNNNNTTGG 2 cut(s) 1079, 1111
AluBI AGCT 8 cut(s) 99, 379, 705, 788, 1449, 1551, 1598, 1913
AluI AGCT 8 cut(s) 99, 379, 705, 788, 1449, 1551, 1598, 1913
Alw21I GWGCWC 1 cut(s) 219
Alw26I GTCTC 6 cut(s) 633, 655, 1012, 1219, 1561, 1949
AlwI GGATC 6 cut(s) 341, 380, 393, 1742, 2001, 2009
Ama87I CYCGRG 1 cut(s) 615
Aor51HI AGCGCT 2 cut(s) 351, 1805
AoxI GGCC 7 cut(s) 134, 795, 997, 1300, 1498, 1701, 1834
ApeKI GCWGC 2 cut(s) 225, 379
ApoI RAATTY 2 cut(s) 1199, 1255
ArsI GACNNNNNNTTYG 2 cut(s) 1007, 1039
AsiGI ACCGGT 2 cut(s) 1346, 1716
Asp700I GAANNNNTTC 1 cut(s) 1774
AspLEI GCGC 4 cut(s) 26, 230, 352, 1806
AspS9I GGNCC 5 cut(s) 998, 1300, 1387, 1835, 2090
AsuC2I CCSGG 4 cut(s) 138, 679, 1196, 1689
AsuHPI GGTGA 7 cut(s) 79, 1255, 1336, 1724, 1751, 1919, 2039
AvaI CYCGRG 1 cut(s) 615
AvaII GGWCC 2 cut(s) 1387, 2090
BamHI GGATCC 1 cut(s) 385
BanI GGYRCC 1 cut(s) 2098
BanII GRGCYC 1 cut(s) 1196
BauI CACGAG 1 cut(s) 218
BbsI GAAGAC 2 cut(s) 350, 1015
Bbv12I GWGCWC 1 cut(s) 219
BbvI GCAGC 2 cut(s) 237, 366
BccI CCATC 4 cut(s) 905, 1405, 1427, 2134
BciT130I CCWGG 5 cut(s) 161, 644, 1298, 1833, 1878
BcnI CCSGG 4 cut(s) 138, 679, 1196, 1689
BcoDI GTCTC 6 cut(s) 633, 655, 1012, 1219, 1561, 1949
BfoI RGCGCY 2 cut(s) 353, 1807
BglII AGATCT 2 cut(s) 437, 990
BisI GCNGC 2 cut(s) 226, 380
BlsI GCNGC 2 cut(s) 227, 381
Bme1390I CCNGG 9 cut(s) 138, 161, 644, 679, 1196, 1298, 1689, 1833, 1878
Bme18I GGWCC 2 cut(s) 1387, 2090
BmeT110I CYCGRG 1 cut(s) 615
BmgT120I GGNCC 5 cut(s) 998, 1300, 1387, 1835, 2090
BmiI GGNNCC 6 cut(s) 387, 698, 1193, 1250, 1837, 2100
BmrFI CCNGG 9 cut(s) 138, 161, 644, 679, 1196, 1298, 1689, 1833, 1878
BmrI ACTGGG 1 cut(s) 815
BmsI GCATC 4 cut(s) 1195, 1380, 1996, 2026
BmuI ACTGGG 1 cut(s) 815
BpiI GAAGAC 2 cut(s) 350, 1015
BpmI CTGGAG 4 cut(s) 366, 637, 1210, 1592
Bpu10I CCTNAGC 2 cut(s) 1902, 1914
BpuEI CTTGAG 1 cut(s) 351
BpuMI CCSGG 4 cut(s) 138, 679, 1196, 1689
Bsa29I ATCGAT 1 cut(s) 2034
BsaAI YACGTR 1 cut(s) 566
BsaI GGTCTC 3 cut(s) 633, 655, 1012
BsaJI CCNNGG 5 cut(s) 159, 1151, 1297, 1309, 1877
BsaWI WCCGGW 2 cut(s) 1346, 1716
Bsc4I CCNNNNNNNGG 9 cut(s) 44, 45, 166, 677, 706, 1092, 1817, 1990, 2024
Bse118I RCCGGY 2 cut(s) 1346, 1716
Bse1I ACTGG 5 cut(s) 317, 349, 821, 1389, 1575
Bse3DI GCAATG 1 cut(s) 466
BseBI CCWGG 5 cut(s) 161, 644, 1298, 1833, 1878
BseCI ATCGAT 1 cut(s) 2034
BseDI CCNNGG 5 cut(s) 159, 1151, 1297, 1309, 1877
BseGI GGATG 5 cut(s) 175, 1134, 1179, 1336, 1416
BseLI CCNNNNNNNGG 9 cut(s) 44, 45, 166, 677, 706, 1092, 1817, 1990, 2024
BseMI GCAATG 1 cut(s) 466
BseMII CTCAG 2 cut(s) 725, 842
BseNI ACTGG 5 cut(s) 317, 349, 821, 1389, 1575
BseRI GAGGAG 3 cut(s) 491, 930, 1207
BseXI GCAGC 2 cut(s) 237, 366
BshFI GGCC 7 cut(s) 136, 797, 999, 1302, 1500, 1703, 1836
BshNI GGYRCC 1 cut(s) 2098
BshTI ACCGGT 2 cut(s) 1346, 1716
BshVI ATCGAT 1 cut(s) 2034
BsiHKAI GWGCWC 1 cut(s) 219
BsiHKCI CYCGRG 1 cut(s) 615
BsiSI CCGG 6 cut(s) 137, 678, 1196, 1347, 1688, 1717
BslFI GGGAC 2 cut(s) 140, 2177
BslI CCNNNNNNNGG 9 cut(s) 44, 45, 166, 677, 706, 1092, 1817, 1990, 2024
BsmAI GTCTC 6 cut(s) 633, 655, 1012, 1219, 1561, 1949
BsmFI GGGAC 2 cut(s) 140, 2177
BsmI GAATGC 1 cut(s) 26
BsnI GGCC 7 cut(s) 136, 797, 999, 1302, 1500, 1703, 1836
Bso31I GGTCTC 3 cut(s) 633, 655, 1012
BsoBI CYCGRG 1 cut(s) 615
Bsp1286I GDGCHC 2 cut(s) 219, 1196
Bsp143I GATC 9 cut(s) 333, 385, 437, 990, 1225, 1233, 1747, 1993, 2014
BspACI CCGC 3 cut(s) 382, 1328, 1369
BspANI GGCC 7 cut(s) 136, 797, 999, 1302, 1500, 1703, 1836
BspCNI CTCAG 2 cut(s) 726, 841
BspDI ATCGAT 1 cut(s) 2034
BspLI GGNNCC 6 cut(s) 387, 698, 1193, 1250, 1837, 2100
BspPI GGATC 6 cut(s) 341, 380, 393, 1742, 2001, 2009
BspT107I GGYRCC 1 cut(s) 2098
BspTNI GGTCTC 3 cut(s) 633, 655, 1012
BsrDI GCAATG 1 cut(s) 466
BsrFI RCCGGY 2 cut(s) 1346, 1716
BsrI ACTGG 5 cut(s) 317, 349, 821, 1389, 1575
BssAI RCCGGY 2 cut(s) 1346, 1716
BssECI CCNNGG 5 cut(s) 159, 1151, 1297, 1309, 1877
BssMI GATC 9 cut(s) 333, 385, 437, 990, 1225, 1233, 1747, 1993, 2014
BssSI CACGAG 1 cut(s) 218
BssT1I CCWWGG 2 cut(s) 1151, 1309
Bst2BI CACGAG 1 cut(s) 218
Bst2UI CCWGG 5 cut(s) 161, 644, 1298, 1833, 1878
Bst4CI ACNGT 6 cut(s) 297, 625, 1213, 1508, 1613, 1960
Bst6I CTCTTC 2 cut(s) 1178, 1269
BstAPI GCANNNNNTGC 1 cut(s) 465
BstBAI YACGTR 1 cut(s) 566
BstC8I GCNNGC 4 cut(s) 373, 377, 635, 1369
BstDEI CTNAG 6 cut(s) 434, 734, 828, 1456, 1902, 1914
BstEII GGTNACC 1 cut(s) 1712
BstF5I GGATG 5 cut(s) 175, 1134, 1179, 1336, 1416
BstH2I RGCGCY 2 cut(s) 353, 1807
BstHHI GCGC 4 cut(s) 26, 230, 352, 1806
BstKTI GATC 9 cut(s) 336, 388, 440, 993, 1228, 1236, 1750, 1996, 2017
BstMAI GTCTC 6 cut(s) 633, 655, 1012, 1219, 1561, 1949
BstMBI GATC 9 cut(s) 333, 385, 437, 990, 1225, 1233, 1747, 1993, 2014
BstMWI GCNNNNNNNGC 4 cut(s) 32, 465, 794, 1604
BstNI CCWGG 5 cut(s) 161, 644, 1298, 1833, 1878
BstNSI RCATGY 2 cut(s) 375, 637
BstPI GGTNACC 1 cut(s) 1712
BstSCI CCNGG 9 cut(s) 136, 159, 642, 677, 1194, 1296, 1687, 1831, 1876
BstV1I GCAGC 2 cut(s) 237, 366
BstV2I GAAGAC 2 cut(s) 350, 1015
BstX2I RGATCY 3 cut(s) 385, 437, 990
BstXI CCANNNNNNTGG 1 cut(s) 1310
BstYI RGATCY 3 cut(s) 385, 437, 990
Bsu15I ATCGAT 1 cut(s) 2034
BsuRI GGCC 7 cut(s) 136, 797, 999, 1302, 1500, 1703, 1836
BsuTUI ATCGAT 1 cut(s) 2034
BtsCI GGATG 5 cut(s) 175, 1134, 1179, 1336, 1416
BtsIMutI CAGTG 2 cut(s) 310, 1618
Cac8I GCNNGC 4 cut(s) 373, 377, 635, 1369
CfoI GCGC 4 cut(s) 26, 230, 352, 1806
Cfr10I RCCGGY 2 cut(s) 1346, 1716
Cfr13I GGNCC 5 cut(s) 998, 1300, 1387, 1835, 2090
ClaI ATCGAT 1 cut(s) 2034
CsiI ACCWGGT 1 cut(s) 642
Csp6I GTAC 1 cut(s) 1156
CspAI ACCGGT 2 cut(s) 1346, 1716
CviQI GTAC 1 cut(s) 1156
DdeI CTNAG 6 cut(s) 434, 734, 828, 1456, 1902, 1914
DpnI GATC 9 cut(s) 335, 387, 439, 992, 1227, 1235, 1749, 1995, 2016
DpnII GATC 9 cut(s) 333, 385, 437, 990, 1225, 1233, 1747, 1993, 2014
DrdI GACNNNNNNGTC 1 cut(s) 647
DseDI GACNNNNNNGTC 1 cut(s) 647
EaeI YGGCCR 1 cut(s) 134
Eam1104I CTCTTC 2 cut(s) 1178, 1269
EarI CTCTTC 2 cut(s) 1178, 1269
Eco130I CCWWGG 2 cut(s) 1151, 1309
Eco24I GRGCYC 1 cut(s) 1196
Eco31I GGTCTC 3 cut(s) 633, 655, 1012
Eco32I GATATC 1 cut(s) 2032
Eco47I GGWCC 2 cut(s) 1387, 2090
Eco47III AGCGCT 2 cut(s) 351, 1805
Eco88I CYCGRG 1 cut(s) 615
Eco91I GGTNACC 1 cut(s) 1712
EcoO109I RGGNCCY 1 cut(s) 1835
EcoO65I GGTNACC 1 cut(s) 1712
EcoRI GAATTC 1 cut(s) 1199
EcoRII CCWGG 5 cut(s) 159, 642, 1296, 1831, 1876
EcoRV GATATC 1 cut(s) 2032
EcoT14I CCWWGG 2 cut(s) 1151, 1309
EcoT22I ATGCAT 1 cut(s) 635
EcoT38I GRGCYC 1 cut(s) 1196
ErhI CCWWGG 2 cut(s) 1151, 1309
FaqI GGGAC 2 cut(s) 140, 2177
FauI CCCGC 2 cut(s) 375, 1376
Fnu4HI GCNGC 2 cut(s) 226, 380
FokI GGATG 5 cut(s) 182, 1121, 1166, 1343, 1423
FriOI GRGCYC 1 cut(s) 1196
Fsp4HI GCNGC 2 cut(s) 226, 380
GlaI GCGC 4 cut(s) 25, 229, 351, 1805
GluI GCNGC 2 cut(s) 226, 380
GsuI CTGGAG 4 cut(s) 366, 637, 1210, 1592
HaeII RGCGCY 2 cut(s) 353, 1807
HaeIII GGCC 7 cut(s) 136, 797, 999, 1302, 1500, 1703, 1836
HapII CCGG 6 cut(s) 137, 678, 1196, 1347, 1688, 1717
HhaI GCGC 4 cut(s) 26, 230, 352, 1806
Hin6I GCGC 4 cut(s) 24, 228, 350, 1804
HinP1I GCGC 4 cut(s) 24, 228, 350, 1804
HincII GTYRAC 2 cut(s) 1423, 2059
HindII GTYRAC 2 cut(s) 1423, 2059
HpaI GTTAAC 1 cut(s) 2059
HpaII CCGG 6 cut(s) 137, 678, 1196, 1347, 1688, 1717
HphI GGTGA 7 cut(s) 79, 1255, 1336, 1724, 1751, 1919, 2039
Hpy166II GTNNAC 4 cut(s) 261, 1338, 1423, 2059
Hpy188I TCNGA 5 cut(s) 363, 865, 1233, 1846, 1975
Hpy8I GTNNAC 4 cut(s) 261, 1338, 1423, 2059
Hpy99I CGWCG 1 cut(s) 813
HpyAV CCTTC 1 cut(s) 88
HpyCH4III ACNGT 6 cut(s) 297, 625, 1213, 1508, 1613, 1960
HpyCH4IV ACGT 1 cut(s) 565
HpyCH4V TGCA 5 cut(s) 189, 195, 375, 459, 633
HpyF10VI GCNNNNNNNGC 4 cut(s) 32, 465, 794, 1604
HpyF3I CTNAG 6 cut(s) 434, 734, 828, 1456, 1902, 1914
HpySE526I ACGT 1 cut(s) 565
HspAI GCGC 4 cut(s) 24, 228, 350, 1804
KspAI GTTAAC 1 cut(s) 2059
Kzo9I GATC 9 cut(s) 333, 385, 437, 990, 1225, 1233, 1747, 1993, 2014
LmnI GCTCC 6 cut(s) 347, 410, 702, 1191, 1254, 1573
Lsp1109I GCAGC 2 cut(s) 237, 366
LweI GCATC 4 cut(s) 1195, 1380, 1996, 2026
MabI ACCWGGT 1 cut(s) 642
MaeII ACGT 1 cut(s) 565
MaeIII GTNAC 7 cut(s) 505, 619, 756, 823, 1712, 1739, 2150
MalI GATC 9 cut(s) 335, 387, 439, 992, 1227, 1235, 1749, 1995, 2016
MboI GATC 9 cut(s) 333, 385, 437, 990, 1225, 1233, 1747, 1993, 2014
MfeI CAATTG 1 cut(s) 190
MflI RGATCY 3 cut(s) 385, 437, 990
MhlI GDGCHC 2 cut(s) 219, 1196
MlyI GAGTC 4 cut(s) 167, 358, 860, 1174
MmeI TCCRAC 3 cut(s) 386, 1207, 2112
Mph1103I ATGCAT 1 cut(s) 635
MroXI GAANNNNTTC 1 cut(s) 1774
MseI TTAA 4 cut(s) 660, 1110, 1698, 2058
MslI CAYNNNNRTG 2 cut(s) 564, 1275
MspA1I CMGCKG 1 cut(s) 1598
MspI CCGG 6 cut(s) 137, 678, 1196, 1347, 1688, 1717
MspR9I CCNGG 9 cut(s) 138, 161, 644, 679, 1196, 1298, 1689, 1833, 1878
MunI CAATTG 1 cut(s) 190
Mva1269I GAATGC 1 cut(s) 26
MvaI CCWGG 5 cut(s) 161, 644, 1298, 1833, 1878
MwoI GCNNNNNNNGC 4 cut(s) 32, 465, 794, 1604
NciI CCSGG 4 cut(s) 138, 679, 1196, 1689
NdeII GATC 9 cut(s) 333, 385, 437, 990, 1225, 1233, 1747, 1993, 2014
NlaIV GGNNCC 6 cut(s) 387, 698, 1193, 1250, 1837, 2100
NmuCI GTSAC 3 cut(s) 1712, 1739, 2150
NsiI ATGCAT 1 cut(s) 635
NspI RCATGY 2 cut(s) 375, 637
PaeI GCATGC 2 cut(s) 375, 637
PctI GAATGC 1 cut(s) 26
PdmI GAANNNNTTC 1 cut(s) 1774
PflFI GACNNNGTC 1 cut(s) 1019
PflMI CCANNNNNTGG 3 cut(s) 706, 1092, 1990
PinAI ACCGGT 2 cut(s) 1346, 1716
PkrI GCNGC 2 cut(s) 227, 381
PleI GAGTC 4 cut(s) 167, 358, 860, 1173
PpsI GAGTC 4 cut(s) 167, 358, 860, 1173
Ppu21I YACGTR 1 cut(s) 566
Psp6I CCWGG 5 cut(s) 159, 642, 1296, 1831, 1876
PspEI GGTNACC 1 cut(s) 1712
PspGI CCWGG 5 cut(s) 159, 642, 1296, 1831, 1876
PspN4I GGNNCC 6 cut(s) 387, 698, 1193, 1250, 1837, 2100
PspPI GGNCC 5 cut(s) 998, 1300, 1387, 1835, 2090
PsrI GAACNNNNNNTAC 2 cut(s) 1374, 1406
PsuI RGATCY 3 cut(s) 385, 437, 990
PsyI GACNNNGTC 1 cut(s) 1019
PvuII CAGCTG 1 cut(s) 1598
RsaI GTAC 1 cut(s) 1157
RsaNI GTAC 1 cut(s) 1156
RseI CAYNNNNRTG 2 cut(s) 564, 1275
SaqAI TTAA 4 cut(s) 660, 1110, 1698, 2058
SatI GCNGC 2 cut(s) 226, 380
Sau3AI GATC 9 cut(s) 333, 385, 437, 990, 1225, 1233, 1747, 1993, 2014
Sau96I GGNCC 5 cut(s) 998, 1300, 1387, 1835, 2090
SchI GAGTC 4 cut(s) 167, 358, 860, 1174
ScrFI CCNGG 9 cut(s) 138, 161, 644, 679, 1196, 1298, 1689, 1833, 1878
SduI GDGCHC 2 cut(s) 219, 1196
SexAI ACCWGGT 1 cut(s) 642
SfaNI GCATC 4 cut(s) 1195, 1380, 1996, 2026
SinI GGWCC 2 cut(s) 1387, 2090
SmiMI CAYNNNNRTG 2 cut(s) 564, 1275
SmlI CTYRAG 1 cut(s) 366
SmoI CTYRAG 1 cut(s) 366
SphI GCATGC 2 cut(s) 375, 637
SsiI CCGC 3 cut(s) 382, 1328, 1369
SspI AATATT 2 cut(s) 904, 2164
StyD4I CCNGG 9 cut(s) 136, 159, 642, 677, 1194, 1296, 1687, 1831, 1876
StyI CCWWGG 2 cut(s) 1151, 1309
TaaI ACNGT 6 cut(s) 297, 625, 1213, 1508, 1613, 1960
TaiI ACGT 1 cut(s) 568
TaqI TCGA 8 cut(s) 68, 276, 397, 954, 1140, 1203, 1563, 2034
TaqII GACCGA 1 cut(s) 1867
Tru1I TTAA 4 cut(s) 660, 1110, 1698, 2058
Tru9I TTAA 4 cut(s) 660, 1110, 1698, 2058
TscAI CASTG 2 cut(s) 317, 1618
TseFI GTSAC 3 cut(s) 1712, 1739, 2150
TseI GCWGC 2 cut(s) 225, 379
Tsp45I GTSAC 3 cut(s) 1712, 1739, 2150
TspDTI ATGAA 5 cut(s) 472, 1123, 1293, 1609, 1875
TspRI CASTG 2 cut(s) 317, 1618
Tth111I GACNNNGTC 1 cut(s) 1019
Van91I CCANNNNNTGG 3 cut(s) 706, 1092, 1990
VpaK11BI GGWCC 2 cut(s) 1387, 2090
XapI RAATTY 2 cut(s) 1199, 1255
XbaI TCTAGA 2 cut(s) 587, 968
XceI RCATGY 2 cut(s) 375, 637
XmnI GAANNNNTTC 1 cut(s) 1774
Zsp2I ATGCAT 1 cut(s) 635
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.