Rh1AG033800

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0000182
Physical Location & Seq
Reverse (-)
5970206 .. 5971561
1356 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG033800.1

Sequence Viewer

Length: 1293 bp
ATGGCTAATGGGTGGTTTTCCTTGGAGTTTACCTACCAACAAGATTTGGACTTCGTCTTTGCAAACAAACCCTGGTTTATTAAAGGCAGGATTCTTCACCTCAACAGGTGGTCACCCTCATTCGATCCTAGGGAGGCTGACATTGAAACCCTGACTCTTTGGGTCATAAGACGATTTATTCGTTTTGACGAGAGGACTGAGAATGCGGAGAATTATGTCTTTGCTAGAGCATGCATGGAAATTAATCTTCGCACCCCTTTGAAGCAGGTGCTAATGGTACACGAGGAGGATGAGGGGGATCTTCCTTTTGAGATGGTCAGCAAGCCAGCAAGAGTCCTGGTTTCGTACAAAGGTATCTTCAAAGTGTGTTTTGAATATGGTAGTCACAAGCACAAGATTAGGAAATGCCCACATAAGAAGAAGGAGAAGCACTTTGTGATGGTTGACCGGGAAAAAGAAGACAATGAGGTGGAGCCTGAAGGCATGGAGGTGGATCCAGAAGTACGAGCTCTTGCCTCAGAGAATGTAATGGTGTTTGTACCTCAACCTATCAAACCGGAGGTAGATGAGGATGAGGAGAGAATGCACAATGCAGACTTGAACCCCCCGTCTCCTGGCTGGACTTATGTTCGTCACAGGAATAGGGCAACATCCAAGTTTACCCCTGTAATAAGCGGTGTTCAAGATGGAAAAGTTGTTCAATCTGGCCCCAGTGATAAGGGCAAGGGCAAGGCTATTTTAGTAGGGAAATCTGACTCCTTTGTCAGACCTGGTCTCTCTTTCAAGAATGCGACTGAGGGGAAGAGAACCATTGTCATTTCTGATGATGATGAGGAGAGCTCTAATAATGACTCTGATAAGAAGGTAGCGTCTGGTGAAGAGGTGGTGAGCTCTCTTTTAACCAAAGATAACTTTTTACCTTCGTTTTCCAATTTACTTGAAATAGCTAAGTTATATGACTATGACACCCTGATGACTAACCACTGTTCCAAGGAACACTATTCTCCTAGGGATGCAGTGAATTATTACTTCTCTAACATTTATCCACTTCACTTGCAGTTTGAGAATTTTAGTGATGCAAGGGGATCAGATTATATTGGCAACAATGATGACTTGAATGAGTTTGATATTAAGATAGTGGATGGGAAAAGAGCCTTGGTTTTTAGGGGAGAGGGCTCTGACATGAGCACTGGATCTAAGAAGCGCACAAGGGAAATGGCGGAGGACCACAGCAAGGTGGAGGCTAATGCGGAAGTGGGCAGCACCTCTCCAACCAAAATGCAGAAACCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-RVT

Protein Analysis

430

Amino Acids

49.21

Weight (kDa)

5.59

Isoelectric Point (pI)

43.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 1 - 44 2.7e-07 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000182)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21471 FvH4_1g27953 FvH4_1g28801 FvH4_2g14522 FvH4_3g04280 FvH4_3g28251 FvH4_4g07491 FvH4_4g30262
malus_domestica MD10G1046400.v1.1 MD10G1126900.v1.1 MD11G1236100.v1.1
prunus_persica Prupe.1G148300_v2.0.a1 Prupe.2G036800_v2.0.a1 Prupe.8G054600_v2.0.a1 Prupe.8G054700_v2.0.a1
pyrus_communis pycom05g05520 pycom08g11160 pycom13g29480
rosa_chinensis RchiOBHm_Chr7g0182921 RchiOBHm_Chr7g0230111
rosa_laevigata RLG00000000536 RLG00000001385 RLG00000001492 RLG00000002640 RLG00000003082 RLG00000005042 RLG00000007254 RLG00000007773 RLG00000008594 RLG00000009508 RLG00000010355 RLG00000013369 RLG00000014370 RLG00000014371 RLG00000018745 RLG00000020268 RLG00000020832 RLG00000022569 RLG00000028073 RLG00000028388 RLG00000028677 RLG00000035645
rosa_multiflora Rmu_co8277499.1_g000001 Rmu_co8500999.1_g000001 Rmu_sc0000014.1_g000025 Rmu_sc0000103.1_g000003 Rmu_sc0000168.1_g000019 Rmu_sc0000283.1_g000006 Rmu_sc0000693.1_g000080 Rmu_sc0000997.1_g000005 Rmu_sc0001228.1_g000005 Rmu_sc0001231.1_g000023 Rmu_sc0002833.1_g000037 Rmu_sc0002869.1_g000015 Rmu_sc0003545.1_g000003 Rmu_sc0003693.1_g000028 Rmu_sc0004000.1_g000022 Rmu_sc0004454.1_g000007 Rmu_sc0004976.1_g000036 Rmu_sc0005014.1_g000013 Rmu_sc0005046.1_g000013 Rmu_sc0005063.1_g000009 Rmu_sc0005652.1_g000002 Rmu_sc0005697.1_g000008 Rmu_sc0006989.1_g000014 Rmu_sc0008957.1_g000003 Rmu_sc0011659.1_g000001 Rmu_sc0027477.1_g000001 Rmu_ssc0000387.1_g000021
rosa_roxburghii Rroxscaffold_1G00020860 Rroxscaffold_1G00035780 Rroxscaffold_1G00051370 Rroxscaffold_2G00101730 Rroxscaffold_3G00230130 Rroxscaffold_4G00280070 Rroxscaffold_4G00281160 Rroxscaffold_4G00318780 Rroxscaffold_5G00341570 Rroxscaffold_5G00341580 Rroxscaffold_7G00191230 Rroxscaffold_7G00195880 Rroxscaffold_7G00195890 Rroxscaffold_7G00209080 Rroxscaffold_7G00209090
rosa_rugosa Rorug02G0170400 Rorug03G0234500 Rorug04G0045200 Rorug07G0191000
rosa_samantha Rh1AG012200 Rh1AG012300 Rh1AG021700 Rh1AG033800 Rh1AG033900 Rh1AG048100 Rh1AG087000 Rh1AG168600 Rh1CG004600 Rh2BG192700 Rh2BG200800 Rh2BG310200 Rh2BG356900 Rh2BG377900 Rh2BG378000 Rh2CG356300 Rh2DG394800 Rh3AG199000 Rh3AG258700 Rh3AG258800 Rh3AG324400 Rh3BG202300 Rh3BG202400 Rh3BG228800 Rh3BG318800 Rh3BG360400 Rh3BG368300 Rh3BG373700 Rh4AG071400 Rh4AG153700 Rh4AG224300 Rh4AG224400 Rh4CG044000 Rh4CG077200 Rh4CG077300 Rh4CG238700 Rh4CG238800 Rh4CG238900 Rh5BG367100 Rh5BG379500 Rh5BG379600 Rh5BG396700 Rh5BG412900 Rh5DG427200 Rh6AG015200 Rh6AG015300 Rh6AG122800 Rh6AG175600 Rh6AG187700 Rh6AG187800 Rh6AG260800 Rh6AG355000 Rh6BG074900 Rh6BG102300 Rh7AG127400 Rh7AG157500 Rh7AG157600 Rh7AG212200 Rh7AG331400 Rh7AG412000 Rh7CG055400 Rh7CG131400 Rh7CG131500 Rh7CG224300 Rh7CG267100 Rh7CG348800
rosa_wichuraiana Rw0G009820 Rw1G000520 Rw1G008820 Rw4G014110 Rw4G019370 Rw4G022440 Rw6G010550 Rw7G001520 Rw7G018400 Rw7G025210 Rw7G027910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 256
AasI GACNNNNNNGTC 1 cut(s) 761
Acc36I ACCTGC 1 cut(s) 256
AciI CCGC 4 cut(s) 206, 675, 1220, 1250
AclWI GGATC 6 cut(s) 119, 306, 488, 501, 1093, 1201
AcsI RAATTY 1 cut(s) 1066
AcuI CTGAAG 1 cut(s) 498
AdeI CACNNNGTG 1 cut(s) 436
AfaI GTAC 4 cut(s) 279, 347, 504, 540
AfiI CCNNNNNNNGG 2 cut(s) 614, 1234
AjnI CCWGG 4 cut(s) 71, 336, 613, 769
AjuI GAANNNNNNNTTGG 2 cut(s) 1139, 1171
AloI GAACNNNNNNTCC 2 cut(s) 681, 713
AluBI AGCT 4 cut(s) 509, 840, 891, 947
AluI AGCT 4 cut(s) 509, 840, 891, 947
Alw21I GWGCWC 4 cut(s) 511, 842, 893, 1190
Alw26I GTCTC 2 cut(s) 615, 779
AlwI GGATC 6 cut(s) 119, 306, 488, 501, 1093, 1201
AoxI GGCC 1 cut(s) 706
ApeKI GCWGC 1 cut(s) 1260
ApoI RAATTY 1 cut(s) 1066
ArsI GACNNNNNNTTYG 4 cut(s) 41, 73, 162, 194
AseI ATTAAT 1 cut(s) 243
AspA2I CCTAGG 2 cut(s) 128, 1007
AspLEI GCGC 1 cut(s) 1206
AspS9I GGNCC 2 cut(s) 707, 1225
AsuC2I CCSGG 1 cut(s) 449
AsuHPI GGTGA 4 cut(s) 89, 105, 887, 898
AvaII GGWCC 1 cut(s) 1225
AvrII CCTAGG 2 cut(s) 128, 1007
BaeI ACNNNNGTAYC 2 cut(s) 337, 370
BamHI GGATCC 1 cut(s) 493
BanII GRGCYC 4 cut(s) 511, 842, 893, 1178
BauI CACGAG 1 cut(s) 281
BbsI GAAGAC 1 cut(s) 465
Bbv12I GWGCWC 4 cut(s) 511, 842, 893, 1190
BbvI GCAGC 1 cut(s) 1272
BccI CCATC 4 cut(s) 307, 433, 680, 1136
BciT130I CCWGG 4 cut(s) 73, 338, 615, 771
BcnI CCSGG 1 cut(s) 449
BcoDI GTCTC 2 cut(s) 615, 779
BfaI CTAG 3 cut(s) 129, 225, 1008
BfuAI ACCTGC 1 cut(s) 256
BisI GCNGC 1 cut(s) 1261
BlnI CCTAGG 2 cut(s) 128, 1007
BlsI GCNGC 1 cut(s) 1262
Bme1390I CCNGG 5 cut(s) 73, 338, 449, 615, 771
Bme18I GGWCC 1 cut(s) 1225
BmgT120I GGNCC 2 cut(s) 707, 1225
BmiI GGNNCC 3 cut(s) 474, 495, 709
BmrFI CCNGG 5 cut(s) 73, 338, 449, 615, 771
BmrI ACTGGG 1 cut(s) 705
BmsI GCATC 2 cut(s) 1003, 1066
BmuI ACTGGG 1 cut(s) 705
BpiI GAAGAC 1 cut(s) 465
BplI GAGNNNNNCTC 2 cut(s) 824, 856
BpuMI CCSGG 1 cut(s) 449
BsaI GGTCTC 1 cut(s) 779
BsaJI CCNNGG 6 cut(s) 21, 71, 128, 990, 1007, 1155
BsaWI WCCGGW 1 cut(s) 556
Bsc4I CCNNNNNNNGG 2 cut(s) 614, 1234
Bse1I ACTGG 2 cut(s) 711, 1195
BseBI CCWGG 4 cut(s) 73, 338, 615, 771
BseDI CCNNGG 6 cut(s) 21, 71, 128, 990, 1007, 1155
BseGI GGATG 5 cut(s) 295, 577, 650, 1018, 1147
BseLI CCNNNNNNNGG 2 cut(s) 614, 1234
BseMII CTCAG 3 cut(s) 189, 531, 786
BseNI ACTGG 2 cut(s) 711, 1195
BseRI GAGGAG 3 cut(s) 299, 590, 848
BseXI GCAGC 1 cut(s) 1272
BshFI GGCC 1 cut(s) 708
BsiHKAI GWGCWC 4 cut(s) 511, 842, 893, 1190
BsiSI CCGG 2 cut(s) 448, 557
BslI CCNNNNNNNGG 2 cut(s) 614, 1234
BsmAI GTCTC 2 cut(s) 615, 779
BsmBI CGTCTC 1 cut(s) 615
BsmI GAATGC 3 cut(s) 208, 588, 793
BsnI GGCC 1 cut(s) 708
Bso31I GGTCTC 1 cut(s) 779
Bsp1286I GDGCHC 5 cut(s) 511, 842, 893, 1178, 1190
Bsp143I GATC 5 cut(s) 124, 298, 493, 1085, 1193
BspACI CCGC 4 cut(s) 206, 675, 1220, 1250
BspANI GGCC 1 cut(s) 708
BspCNI CTCAG 3 cut(s) 190, 530, 787
BspLI GGNNCC 3 cut(s) 474, 495, 709
BspMI ACCTGC 1 cut(s) 256
BspPI GGATC 6 cut(s) 119, 306, 488, 501, 1093, 1201
BspTNI GGTCTC 1 cut(s) 779
BsrI ACTGG 2 cut(s) 711, 1195
BssECI CCNNGG 6 cut(s) 21, 71, 128, 990, 1007, 1155
BssMI GATC 5 cut(s) 124, 298, 493, 1085, 1193
BssSI CACGAG 1 cut(s) 281
BssT1I CCWWGG 5 cut(s) 21, 128, 990, 1007, 1155
Bst2BI CACGAG 1 cut(s) 281
Bst2UI CCWGG 4 cut(s) 73, 338, 615, 771
Bst4CI ACNGT 1 cut(s) 986
Bst6I CTCTTC 2 cut(s) 797, 873
BstC8I GCNNGC 3 cut(s) 232, 323, 327
BstDEI CTNAG 5 cut(s) 198, 517, 795, 948, 1197
BstEII GGTNACC 1 cut(s) 111
BstF5I GGATG 5 cut(s) 295, 577, 650, 1018, 1147
BstHHI GCGC 1 cut(s) 1206
BstKTI GATC 5 cut(s) 127, 301, 496, 1088, 1196
BstMAI GTCTC 2 cut(s) 615, 779
BstMBI GATC 5 cut(s) 124, 298, 493, 1085, 1193
BstNI CCWGG 4 cut(s) 73, 338, 615, 771
BstNSI RCATGY 1 cut(s) 234
BstPI GGTNACC 1 cut(s) 111
BstSCI CCNGG 5 cut(s) 71, 336, 447, 613, 769
BstV1I GCAGC 1 cut(s) 1272
BstV2I GAAGAC 1 cut(s) 465
BstX2I RGATCY 3 cut(s) 298, 493, 1193
BstYI RGATCY 3 cut(s) 298, 493, 1193
BsuRI GGCC 1 cut(s) 708
BtsCI GGATG 5 cut(s) 295, 577, 650, 1018, 1147
BtsI GCAGTG 1 cut(s) 1023
BtsIMutI CAGTG 4 cut(s) 718, 982, 1023, 1188
BveI ACCTGC 1 cut(s) 256
Cac8I GCNNGC 3 cut(s) 232, 323, 327
CfoI GCGC 1 cut(s) 1206
Cfr13I GGNCC 2 cut(s) 707, 1225
CseI GACGC 1 cut(s) 858
CsiI ACCWGGT 1 cut(s) 769
Csp6I GTAC 4 cut(s) 278, 346, 503, 539
CspCI CAANNNNNGTGG 2 cut(s) 1035, 1070
CviAII CATG 5 cut(s) 231, 235, 484, 1183, 1290
CviQI GTAC 4 cut(s) 278, 346, 503, 539
DdeI CTNAG 5 cut(s) 198, 517, 795, 948, 1197
DpnI GATC 5 cut(s) 126, 300, 495, 1087, 1195
DpnII GATC 5 cut(s) 124, 298, 493, 1085, 1193
DraIII CACNNNGTG 1 cut(s) 436
DrdI GACNNNNNNGTC 1 cut(s) 761
DseDI GACNNNNNNGTC 1 cut(s) 761
Eam1104I CTCTTC 2 cut(s) 797, 873
EarI CTCTTC 2 cut(s) 797, 873
EciI GGCGGA 1 cut(s) 1235
Ecl136II GAGCTC 3 cut(s) 509, 840, 891
Eco130I CCWWGG 5 cut(s) 21, 128, 990, 1007, 1155
Eco24I GRGCYC 4 cut(s) 511, 842, 893, 1178
Eco31I GGTCTC 1 cut(s) 779
Eco47I GGWCC 1 cut(s) 1225
Eco53kI GAGCTC 3 cut(s) 509, 840, 891
Eco57I CTGAAG 1 cut(s) 498
Eco91I GGTNACC 1 cut(s) 111
EcoICRI GAGCTC 3 cut(s) 509, 840, 891
EcoO65I GGTNACC 1 cut(s) 111
EcoRII CCWGG 4 cut(s) 71, 336, 613, 769
EcoT14I CCWWGG 5 cut(s) 21, 128, 990, 1007, 1155
EcoT22I ATGCAT 1 cut(s) 236
EcoT38I GRGCYC 4 cut(s) 511, 842, 893, 1178
ErhI CCWWGG 5 cut(s) 21, 128, 990, 1007, 1155
Esp3I CGTCTC 1 cut(s) 615
FaeI CATG 5 cut(s) 234, 238, 487, 1186, 1293
FatI CATG 5 cut(s) 230, 234, 483, 1182, 1289
Fnu4HI GCNGC 1 cut(s) 1261
FokI GGATG 5 cut(s) 302, 584, 637, 1025, 1154
FriOI GRGCYC 4 cut(s) 511, 842, 893, 1178
Fsp4HI GCNGC 1 cut(s) 1261
FspBI CTAG 3 cut(s) 129, 225, 1008
GlaI GCGC 1 cut(s) 1205
GluI GCNGC 1 cut(s) 1261
HaeIII GGCC 1 cut(s) 708
HapII CCGG 2 cut(s) 448, 557
HgaI GACGC 1 cut(s) 858
HhaI GCGC 1 cut(s) 1206
Hin1II CATG 5 cut(s) 234, 238, 487, 1186, 1293
Hin6I GCGC 1 cut(s) 1204
HinP1I GCGC 1 cut(s) 1204
HincII GTYRAC 1 cut(s) 445
HindII GTYRAC 1 cut(s) 445
HinfI GANTC 5 cut(s) 91, 154, 333, 755, 851
HpaII CCGG 2 cut(s) 448, 557
HphI GGTGA 4 cut(s) 89, 105, 887, 898
Hpy166II GTNNAC 4 cut(s) 30, 280, 445, 660
Hpy188I TCNGA 7 cut(s) 520, 754, 767, 823, 856, 1090, 1180
Hpy188III TCNNGA 3 cut(s) 497, 683, 784
Hpy8I GTNNAC 4 cut(s) 30, 280, 445, 660
HpyAV CCTTC 4 cut(s) 415, 473, 856, 930
HpyCH4III ACNGT 1 cut(s) 986
HpyCH4V TGCA 8 cut(s) 62, 234, 586, 593, 1016, 1057, 1079, 1282
HpyF3I CTNAG 5 cut(s) 198, 517, 795, 948, 1197
Hsp92II CATG 5 cut(s) 234, 238, 487, 1186, 1293
HspAI GCGC 1 cut(s) 1204
Kzo9I GATC 5 cut(s) 124, 298, 493, 1085, 1193
LmnI GCTCC 1 cut(s) 472
Lsp1109I GCAGC 1 cut(s) 1272
LweI GCATC 2 cut(s) 1003, 1066
MabI ACCWGGT 1 cut(s) 769
MaeI CTAG 3 cut(s) 129, 225, 1008
MaeIII GTNAC 3 cut(s) 111, 383, 632
MalI GATC 5 cut(s) 126, 300, 495, 1087, 1195
MboI GATC 5 cut(s) 124, 298, 493, 1085, 1193
MboII GAAGA 8 cut(s) 86, 239, 293, 349, 430, 470, 814, 890
MflI RGATCY 3 cut(s) 298, 493, 1193
MhlI GDGCHC 5 cut(s) 511, 842, 893, 1178, 1190
MluCI AATT 5 cut(s) 211, 240, 931, 1021, 1066
MlyI GAGTC 4 cut(s) 148, 342, 749, 845
Mph1103I ATGCAT 1 cut(s) 236
MseI TTAA 4 cut(s) 81, 243, 899, 1131
MslI CAYNNNNRTG 2 cut(s) 488, 971
MspI CCGG 2 cut(s) 448, 557
MspR9I CCNGG 5 cut(s) 73, 338, 449, 615, 771
Mva1269I GAATGC 3 cut(s) 208, 588, 793
MvaI CCWGG 4 cut(s) 73, 338, 615, 771
NciI CCSGG 1 cut(s) 449
NdeII GATC 5 cut(s) 124, 298, 493, 1085, 1193
NlaIII CATG 5 cut(s) 234, 238, 487, 1186, 1293
NlaIV GGNNCC 3 cut(s) 474, 495, 709
NmuCI GTSAC 3 cut(s) 111, 383, 632
NsiI ATGCAT 1 cut(s) 236
NspI RCATGY 1 cut(s) 234
PaeI GCATGC 1 cut(s) 234
PaqCI CACCTGC 1 cut(s) 256
PcsI WCGNNNNNNNCGW 1 cut(s) 178
PctI GAATGC 3 cut(s) 208, 588, 793
PfeI GAWTC 1 cut(s) 91
PflFI GACNNNGTC 2 cut(s) 53, 771
PkrI GCNGC 1 cut(s) 1262
PleI GAGTC 4 cut(s) 148, 341, 749, 845
PpsI GAGTC 4 cut(s) 148, 341, 749, 845
PshBI ATTAAT 1 cut(s) 243
Psp124BI GAGCTC 3 cut(s) 511, 842, 893
Psp6I CCWGG 4 cut(s) 71, 336, 613, 769
PspEI GGTNACC 1 cut(s) 111
PspGI CCWGG 4 cut(s) 71, 336, 613, 769
PspN4I GGNNCC 3 cut(s) 474, 495, 709
PspPI GGNCC 2 cut(s) 707, 1225
PsuI RGATCY 3 cut(s) 298, 493, 1193
PsyI GACNNNGTC 2 cut(s) 53, 771
RsaI GTAC 4 cut(s) 279, 347, 504, 540
RsaNI GTAC 4 cut(s) 278, 346, 503, 539
RseI CAYNNNNRTG 2 cut(s) 488, 971
SacI GAGCTC 3 cut(s) 511, 842, 893
SaqAI TTAA 4 cut(s) 81, 243, 899, 1131
SatI GCNGC 1 cut(s) 1261
Sau3AI GATC 5 cut(s) 124, 298, 493, 1085, 1193
Sau96I GGNCC 2 cut(s) 707, 1225
SchI GAGTC 4 cut(s) 148, 342, 749, 845
ScrFI CCNGG 5 cut(s) 73, 338, 449, 615, 771
SduI GDGCHC 5 cut(s) 511, 842, 893, 1178, 1190
SexAI ACCWGGT 1 cut(s) 769
SfaNI GCATC 2 cut(s) 1003, 1066
SinI GGWCC 1 cut(s) 1225
SmiMI CAYNNNNRTG 2 cut(s) 488, 971
SphI GCATGC 1 cut(s) 234
Sse9I AATT 5 cut(s) 211, 240, 931, 1021, 1066
SsiI CCGC 4 cut(s) 206, 675, 1220, 1250
SspMI CTAG 3 cut(s) 129, 225, 1008
SstI GAGCTC 3 cut(s) 511, 842, 893
StyD4I CCNGG 5 cut(s) 71, 336, 447, 613, 769
StyI CCWWGG 5 cut(s) 21, 128, 990, 1007, 1155
TaaI ACNGT 1 cut(s) 986
TaqI TCGA 1 cut(s) 123
TasI AATT 5 cut(s) 211, 240, 931, 1021, 1066
TfiI GAWTC 1 cut(s) 91
Tru1I TTAA 4 cut(s) 81, 243, 899, 1131
Tru9I TTAA 4 cut(s) 81, 243, 899, 1131
TscAI CASTG 4 cut(s) 718, 989, 1023, 1195
TseFI GTSAC 3 cut(s) 111, 383, 632
TseI GCWGC 1 cut(s) 1260
Tsp45I GTSAC 3 cut(s) 111, 383, 632
TspRI CASTG 4 cut(s) 718, 989, 1023, 1195
Tth111I GACNNNGTC 2 cut(s) 53, 771
VpaK11BI GGWCC 1 cut(s) 1225
VspI ATTAAT 1 cut(s) 243
XapI RAATTY 1 cut(s) 1066
XceI RCATGY 1 cut(s) 234
XmaJI CCTAGG 2 cut(s) 128, 1007
XspI CTAG 3 cut(s) 129, 225, 1008
Zsp2I ATGCAT 1 cut(s) 236
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.