Rh7CG055400

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000182
Physical Location & Seq
Forward (+)
4007421 .. 4008837
1417 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG055400.1

Sequence Viewer

Length: 1317 bp
ATGGCTTACAGTCCTAACTCTCAAGCTCATGTTTCTAGCCCTAGGAGACTACCACAAACTAGAACTTACCCTCATTTCACCCGAAACACTGATACTGATCCTATCCAGGTTAACTTTGGGGATGCCTCTTTTGATGTTGATCAATTTGCTGCTCAGGTAGATATGCCTCCCCCTCCTGAAGGTTTTTTCTCCTACTTTTCCAAATTTTGCCTTATTGGCAAAAATTTTGGGAAGCAACTGTCTGCTGATATCGTCCTTGAGAAGTGTTTTGAGTTCTGGACAAACCTGCAGGGCTCAGTTACCATGAACCGGTTAGTCAATAACTGGTTTAGTTTTGAGTTCTCTATGGAGGAGGATATTGAGTTTGTTCTAGGAAGGAGGCCTTGGCTTATTCATAGTCGTCTCTTTCGGCTCCAAAGATGGACCCCAAGCTTCAATCCAACTGTGAATCGTATTGATAAGCTCATTGTCTGGGAGCGTCTTCCAAATTTTCCAAGGCCCTATTGGAACTCTACCTCTCTTAAGTCCTTGTTAAAGCATCTTGGTCGATTTATTCTGGTAGATGACAACACCATCAATGGTAAAAAGACCATGTTTGCTAGAATTCTCATTAAACTAGACCTGCGCTACCCTCTTAAGTGTACTGTCCTAGTCAATAATGGGAATGAACCCCCTTCTGTTGTTCTTGTCTCCTGTGAGGTGATCTTTCAAGTGTGCTTCAGGTGTGGCCAGCACAGTACTAGGCTTCACTCTTGCCCGCTCGGGGCTGTCAATGACAACTTTTTCATGGTGGAGCGTATTGGACAAGAACATGCTATTTACTTTCTAGAGATGGCTGATAATGATTTTATCAAGCCTTTCCTCTCTGATGATGTCTCTATCATCTTTCCACAACCTTTAGTGGCTAATCATTTCCCCCTATCCTCTGATCTCCCTTCTGAAAACCATGATGGAGGACCTTGGAAGATTGTGTCCAGGAAGGGAAAAGGAAAGGATGCTCGCTTTTCCAAGTTTGGCCCTGCAGGCCTGGCAAAGAAGAAGGATGTTATTGTGCTCTCTGATTCATCTCAGGATGTGGATCCGTATTTAGATGCTGAGGAAGCGCCAAAAATTGGAGATATGGATGCGCTGCTAGTTGTGAAGGACTTGTCAAAGAGTCCGGCTGTTGATGTTTCTGGTCCTAGTAATTTTATGTGTTCTAGTCCTAAGAAAAGAAGTAGGCAGATGGTGGAAATGATGGAGACTAGTGATAACCAGAGTCTAGGTTCTATGGCCCCAACTGATAATGTTGTTTCTGAGATTGCCAAGCTGGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-RVT

Protein Analysis

438

Amino Acids

49.65

Weight (kDa)

6.52

Isoelectric Point (pI)

38.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 68 - 148 5.9e-12 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000182)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21471 FvH4_1g27953 FvH4_1g28801 FvH4_2g14522 FvH4_3g04280 FvH4_3g28251 FvH4_4g07491 FvH4_4g30262
malus_domestica MD10G1046400.v1.1 MD10G1126900.v1.1 MD11G1236100.v1.1
prunus_persica Prupe.1G148300_v2.0.a1 Prupe.2G036800_v2.0.a1 Prupe.8G054600_v2.0.a1 Prupe.8G054700_v2.0.a1
pyrus_communis pycom05g05520 pycom08g11160 pycom13g29480
rosa_chinensis RchiOBHm_Chr7g0182921 RchiOBHm_Chr7g0230111
rosa_laevigata RLG00000000536 RLG00000001385 RLG00000001492 RLG00000002640 RLG00000003082 RLG00000005042 RLG00000007254 RLG00000007773 RLG00000008594 RLG00000009508 RLG00000010355 RLG00000013369 RLG00000014370 RLG00000014371 RLG00000018745 RLG00000020268 RLG00000020832 RLG00000022569 RLG00000028073 RLG00000028388 RLG00000028677 RLG00000035645
rosa_multiflora Rmu_co8277499.1_g000001 Rmu_co8500999.1_g000001 Rmu_sc0000014.1_g000025 Rmu_sc0000103.1_g000003 Rmu_sc0000168.1_g000019 Rmu_sc0000283.1_g000006 Rmu_sc0000693.1_g000080 Rmu_sc0000997.1_g000005 Rmu_sc0001228.1_g000005 Rmu_sc0001231.1_g000023 Rmu_sc0002833.1_g000037 Rmu_sc0002869.1_g000015 Rmu_sc0003545.1_g000003 Rmu_sc0003693.1_g000028 Rmu_sc0004000.1_g000022 Rmu_sc0004454.1_g000007 Rmu_sc0004976.1_g000036 Rmu_sc0005014.1_g000013 Rmu_sc0005046.1_g000013 Rmu_sc0005063.1_g000009 Rmu_sc0005652.1_g000002 Rmu_sc0005697.1_g000008 Rmu_sc0006989.1_g000014 Rmu_sc0008957.1_g000003 Rmu_sc0011659.1_g000001 Rmu_sc0027477.1_g000001 Rmu_ssc0000387.1_g000021
rosa_roxburghii Rroxscaffold_1G00020860 Rroxscaffold_1G00035780 Rroxscaffold_1G00051370 Rroxscaffold_2G00101730 Rroxscaffold_3G00230130 Rroxscaffold_4G00280070 Rroxscaffold_4G00281160 Rroxscaffold_4G00318780 Rroxscaffold_5G00341570 Rroxscaffold_5G00341580 Rroxscaffold_7G00191230 Rroxscaffold_7G00195880 Rroxscaffold_7G00195890 Rroxscaffold_7G00209080 Rroxscaffold_7G00209090
rosa_rugosa Rorug02G0170400 Rorug03G0234500 Rorug04G0045200 Rorug07G0191000
rosa_samantha Rh1AG012200 Rh1AG012300 Rh1AG021700 Rh1AG033800 Rh1AG033900 Rh1AG048100 Rh1AG087000 Rh1AG168600 Rh1CG004600 Rh2BG192700 Rh2BG200800 Rh2BG310200 Rh2BG356900 Rh2BG377900 Rh2BG378000 Rh2CG356300 Rh2DG394800 Rh3AG199000 Rh3AG258700 Rh3AG258800 Rh3AG324400 Rh3BG202300 Rh3BG202400 Rh3BG228800 Rh3BG318800 Rh3BG360400 Rh3BG368300 Rh3BG373700 Rh4AG071400 Rh4AG153700 Rh4AG224300 Rh4AG224400 Rh4CG044000 Rh4CG077200 Rh4CG077300 Rh4CG238700 Rh4CG238800 Rh4CG238900 Rh5BG367100 Rh5BG379500 Rh5BG379600 Rh5BG396700 Rh5BG412900 Rh5DG427200 Rh6AG015200 Rh6AG015300 Rh6AG122800 Rh6AG175600 Rh6AG187700 Rh6AG187800 Rh6AG260800 Rh6AG355000 Rh6BG074900 Rh6BG102300 Rh7AG127400 Rh7AG157500 Rh7AG157600 Rh7AG212200 Rh7AG331400 Rh7AG412000 Rh7CG055400 Rh7CG131400 Rh7CG131500 Rh7CG224300 Rh7CG267100 Rh7CG348800
rosa_wichuraiana Rw0G009820 Rw1G000520 Rw1G008820 Rw4G014110 Rw4G019370 Rw4G022440 Rw6G010550 Rw7G001520 Rw7G018400 Rw7G025210 Rw7G027910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 294, 630
AccB7I CCANNNNNTGG 1 cut(s) 1112
AccBSI CCGCTC 1 cut(s) 760
AciI CCGC 1 cut(s) 758
AclWI GGATC 3 cut(s) 92, 1073, 1086
AcoI YGGCCR 1 cut(s) 727
AcsI RAATTY 4 cut(s) 203, 223, 487, 603
AcuI CTGAAG 2 cut(s) 198, 703
AfaI GTAC 2 cut(s) 643, 739
AfiI CCNNNNNNNGG 4 cut(s) 179, 309, 763, 1112
AflII CTTAAG 2 cut(s) 521, 635
AgeI ACCGGT 1 cut(s) 309
AgsI TTSAA 2 cut(s) 436, 710
AhlI ACTAGT 1 cut(s) 1244
AjnI CCWGG 3 cut(s) 105, 974, 1026
AjuI GAANNNNNNNTTGG 2 cut(s) 367, 399
AluBI AGCT 4 cut(s) 26, 432, 463, 1309
AluI AGCT 4 cut(s) 26, 432, 463, 1309
Alw21I GWGCWC 1 cut(s) 1056
Alw26I GTCTC 5 cut(s) 40, 407, 694, 880, 1235
AlwI GGATC 3 cut(s) 92, 1073, 1086
Ama87I CYCGRG 1 cut(s) 761
AoxI GGCC 6 cut(s) 380, 497, 727, 1015, 1024, 1272
ApeKI GCWGC 2 cut(s) 149, 1129
ApoI RAATTY 4 cut(s) 203, 223, 487, 603
AsiGI ACCGGT 1 cut(s) 309
AspA2I CCTAGG 1 cut(s) 41
AspLEI GCGC 3 cut(s) 627, 1105, 1129
AspS9I GGNCC 6 cut(s) 423, 498, 956, 1016, 1178, 1273
AsuHPI GGTGA 2 cut(s) 70, 712
AvaI CYCGRG 1 cut(s) 761
AvaII GGWCC 3 cut(s) 423, 956, 1178
AvrII CCTAGG 1 cut(s) 41
BalI TGGCCA 1 cut(s) 729
BamHI GGATCC 1 cut(s) 1078
BanII GRGCYC 1 cut(s) 296
BbsI GAAGAC 1 cut(s) 473
Bbv12I GWGCWC 1 cut(s) 1056
BbvCI CCTCAGC 1 cut(s) 1095
BbvI GCAGC 2 cut(s) 136, 1116
BccI CCATC 6 cut(s) 414, 581, 826, 944, 1219, 1231
BcgI CGANNNNNNTGC 2 cut(s) 527, 561
BciT130I CCWGG 3 cut(s) 107, 976, 1028
BclI TGATCA 1 cut(s) 139
BcoDI GTCTC 5 cut(s) 40, 407, 694, 880, 1235
BcuI ACTAGT 1 cut(s) 1244
BfmI CTRYAG 2 cut(s) 287, 1020
BfoI RGCGCY 1 cut(s) 1106
BfrI CTTAAG 2 cut(s) 521, 635
BfuAI ACCTGC 2 cut(s) 294, 630
BglI GCCNNNNNGGC 2 cut(s) 216, 1023
BisI GCNGC 2 cut(s) 150, 1130
BlnI CCTAGG 1 cut(s) 41
BlsI GCNGC 2 cut(s) 151, 1131
BmcAI AGTACT 1 cut(s) 739
Bme1390I CCNGG 3 cut(s) 107, 976, 1028
Bme18I GGWCC 3 cut(s) 423, 956, 1178
BmeT110I CYCGRG 1 cut(s) 761
BmgT120I GGNCC 6 cut(s) 423, 498, 956, 1016, 1178, 1273
BmiI GGNNCC 4 cut(s) 413, 425, 1080, 1275
BmrFI CCNGG 3 cut(s) 107, 976, 1028
BmsI GCATC 5 cut(s) 112, 547, 985, 1081, 1114
BpiI GAAGAC 1 cut(s) 473
Bpu10I CCTNAGC 2 cut(s) 153, 1095
BpuEI CTTGAG 2 cut(s) 6, 278
BsaBI GATNNNNATC 3 cut(s) 96, 138, 1077
BsaJI CCNNGG 4 cut(s) 41, 383, 494, 959
BsaWI WCCGGW 1 cut(s) 309
Bsc4I CCNNNNNNNGG 4 cut(s) 179, 309, 763, 1112
Bse118I RCCGGY 1 cut(s) 309
Bse1I ACTGG 1 cut(s) 329
Bse8I GATNNNNATC 3 cut(s) 96, 138, 1077
BseBI CCWGG 3 cut(s) 107, 976, 1028
BseDI CCNNGG 4 cut(s) 41, 383, 494, 959
BseGI GGATG 5 cut(s) 127, 1000, 1048, 1078, 1129
BseJI GATNNNNATC 3 cut(s) 96, 138, 1077
BseLI CCNNNNNNNGG 4 cut(s) 179, 309, 763, 1112
BseMII CTCAG 5 cut(s) 167, 309, 1082, 1086, 1287
BseNI ACTGG 1 cut(s) 329
BseRI GAGGAG 1 cut(s) 365
BseXI GCAGC 2 cut(s) 136, 1116
BshFI GGCC 6 cut(s) 382, 499, 729, 1017, 1026, 1274
BshTI ACCGGT 1 cut(s) 309
BsiHKAI GWGCWC 1 cut(s) 1056
BsiHKCI CYCGRG 1 cut(s) 761
BsiSI CCGG 2 cut(s) 310, 1160
BslI CCNNNNNNNGG 4 cut(s) 179, 309, 763, 1112
BsmAI GTCTC 5 cut(s) 40, 407, 694, 880, 1235
BsmBI CGTCTC 1 cut(s) 407
BsnI GGCC 6 cut(s) 382, 499, 729, 1017, 1026, 1274
BsoBI CYCGRG 1 cut(s) 761
Bsp1286I GDGCHC 2 cut(s) 296, 1056
Bsp143I GATC 5 cut(s) 97, 139, 702, 928, 1078
BspACI CCGC 1 cut(s) 758
BspANI GGCC 6 cut(s) 382, 499, 729, 1017, 1026, 1274
BspCNI CTCAG 5 cut(s) 166, 308, 1081, 1087, 1288
BspLI GGNNCC 4 cut(s) 413, 425, 1080, 1275
BspMAI CTGCAG 2 cut(s) 291, 1024
BspMI ACCTGC 2 cut(s) 294, 630
BspPI GGATC 3 cut(s) 92, 1073, 1086
BspTI CTTAAG 2 cut(s) 521, 635
BsrBI CCGCTC 1 cut(s) 760
BsrFI RCCGGY 1 cut(s) 309
BsrI ACTGG 1 cut(s) 329
BssAI RCCGGY 1 cut(s) 309
BssECI CCNNGG 4 cut(s) 41, 383, 494, 959
BssMI GATC 5 cut(s) 97, 139, 702, 928, 1078
BssT1I CCWWGG 4 cut(s) 41, 383, 494, 959
Bst2UI CCWGG 3 cut(s) 107, 976, 1028
Bst4CI ACNGT 5 cut(s) 11, 240, 445, 646, 737
BstAFI CTTAAG 2 cut(s) 521, 635
BstC8I GCNNGC 4 cut(s) 731, 758, 1000, 1024
BstDEI CTNAG 6 cut(s) 153, 295, 1068, 1095, 1206, 1296
BstENI CCTNNNNNAGG 1 cut(s) 177
BstF5I GGATG 5 cut(s) 127, 1000, 1048, 1078, 1129
BstH2I RGCGCY 1 cut(s) 1106
BstHHI GCGC 3 cut(s) 627, 1105, 1129
BstKTI GATC 5 cut(s) 100, 142, 705, 931, 1081
BstMAI GTCTC 5 cut(s) 40, 407, 694, 880, 1235
BstMBI GATC 5 cut(s) 97, 139, 702, 928, 1078
BstMWI GCNNNNNNNGC 4 cut(s) 216, 1023, 1028, 1100
BstNI CCWGG 3 cut(s) 107, 976, 1028
BstNSI RCATGY 1 cut(s) 815
BstSCI CCNGG 3 cut(s) 105, 974, 1026
BstSFI CTRYAG 2 cut(s) 287, 1020
BstV1I GCAGC 2 cut(s) 136, 1116
BstV2I GAAGAC 1 cut(s) 473
BstX2I RGATCY 1 cut(s) 1078
BstYI RGATCY 1 cut(s) 1078
BsuRI GGCC 6 cut(s) 382, 499, 729, 1017, 1026, 1274
BtsCI GGATG 5 cut(s) 127, 1000, 1048, 1078, 1129
BtsIMutI CAGTG 1 cut(s) 87
BveI ACCTGC 2 cut(s) 294, 630
Cac8I GCNNGC 4 cut(s) 731, 758, 1000, 1024
CfoI GCGC 3 cut(s) 627, 1105, 1129
Cfr10I RCCGGY 1 cut(s) 309
Cfr13I GGNCC 6 cut(s) 423, 498, 956, 1016, 1178, 1273
CseI GACGC 1 cut(s) 467
Csp6I GTAC 2 cut(s) 642, 738
CspAI ACCGGT 1 cut(s) 309
CviAII CATG 6 cut(s) 29, 304, 592, 787, 812, 947
CviQI GTAC 2 cut(s) 642, 738
DdeI CTNAG 6 cut(s) 153, 295, 1068, 1095, 1206, 1296
DpnI GATC 5 cut(s) 99, 141, 704, 930, 1080
DpnII GATC 5 cut(s) 97, 139, 702, 928, 1078
EaeI YGGCCR 1 cut(s) 727
Eco130I CCWWGG 4 cut(s) 41, 383, 494, 959
Eco147I AGGCCT 2 cut(s) 382, 1026
Eco24I GRGCYC 1 cut(s) 296
Eco32I GATATC 1 cut(s) 250
Eco47I GGWCC 3 cut(s) 423, 956, 1178
Eco57I CTGAAG 2 cut(s) 198, 703
Eco88I CYCGRG 1 cut(s) 761
EcoNI CCTNNNNNAGG 1 cut(s) 177
EcoO109I RGGNCCY 2 cut(s) 498, 956
EcoRI GAATTC 1 cut(s) 603
EcoRII CCWGG 3 cut(s) 105, 974, 1026
EcoRV GATATC 1 cut(s) 250
EcoT14I CCWWGG 4 cut(s) 41, 383, 494, 959
EcoT38I GRGCYC 1 cut(s) 296
ErhI CCWWGG 4 cut(s) 41, 383, 494, 959
Esp3I CGTCTC 1 cut(s) 407
FaeI CATG 6 cut(s) 32, 307, 595, 790, 815, 950
FalI AAGNNNNNCTT 2 cut(s) 367, 399
FatI CATG 6 cut(s) 28, 303, 591, 786, 811, 946
FauI CCCGC 1 cut(s) 765
FbaI TGATCA 1 cut(s) 139
Fnu4HI GCNGC 2 cut(s) 150, 1130
FokI GGATG 5 cut(s) 134, 1007, 1055, 1085, 1136
FriOI GRGCYC 1 cut(s) 296
Fsp4HI GCNGC 2 cut(s) 150, 1130
GlaI GCGC 3 cut(s) 626, 1104, 1128
GluI GCNGC 2 cut(s) 150, 1130
HaeII RGCGCY 1 cut(s) 1106
HaeIII GGCC 6 cut(s) 382, 499, 729, 1017, 1026, 1274
HapII CCGG 2 cut(s) 310, 1160
HgaI GACGC 1 cut(s) 467
HhaI GCGC 3 cut(s) 627, 1105, 1129
Hin1II CATG 6 cut(s) 32, 307, 595, 790, 815, 950
Hin6I GCGC 3 cut(s) 625, 1103, 1127
HinP1I GCGC 3 cut(s) 625, 1103, 1127
HincII GTYRAC 1 cut(s) 112
HindII GTYRAC 1 cut(s) 112
HindIII AAGCTT 1 cut(s) 430
HinfI GANTC 4 cut(s) 448, 1061, 1156, 1258
HpaI GTTAAC 1 cut(s) 112
HpaII CCGG 2 cut(s) 310, 1160
HphI GGTGA 2 cut(s) 70, 712
Hpy166II GTNNAC 2 cut(s) 112, 642
Hpy188I TCNGA 5 cut(s) 868, 928, 940, 1060, 1297
Hpy188III TCNNGA 4 cut(s) 176, 277, 827, 1070
Hpy8I GTNNAC 2 cut(s) 112, 642
HpyAV CCTTC 7 cut(s) 173, 369, 684, 945, 973, 1033, 1135
HpyCH4III ACNGT 5 cut(s) 11, 240, 445, 646, 737
HpyCH4V TGCA 2 cut(s) 289, 1022
HpyF10VI GCNNNNNNNGC 4 cut(s) 216, 1023, 1028, 1100
HpyF3I CTNAG 6 cut(s) 153, 295, 1068, 1095, 1206, 1296
Hsp92II CATG 6 cut(s) 32, 307, 595, 790, 815, 950
HspAI GCGC 3 cut(s) 625, 1103, 1127
Ksp22I TGATCA 1 cut(s) 139
KspAI GTTAAC 1 cut(s) 112
Kzo9I GATC 5 cut(s) 97, 139, 702, 928, 1078
LmnI GCTCC 3 cut(s) 417, 475, 793
Lsp1109I GCAGC 2 cut(s) 136, 1116
LweI GCATC 5 cut(s) 112, 547, 985, 1081, 1114
MaeIII GTNAC 1 cut(s) 298
MalI GATC 5 cut(s) 99, 141, 704, 930, 1080
MbiI CCGCTC 1 cut(s) 760
MboI GATC 5 cut(s) 97, 139, 702, 928, 1078
MboII GAAGA 3 cut(s) 473, 976, 1048
MflI RGATCY 1 cut(s) 1078
MhlI GDGCHC 2 cut(s) 296, 1056
MlsI TGGCCA 1 cut(s) 729
MluCI AATT 7 cut(s) 143, 203, 223, 487, 603, 1110, 1186
MluNI TGGCCA 1 cut(s) 729
MlyI GAGTC 2 cut(s) 1165, 1267
MmeI TCCRAC 1 cut(s) 464
Mox20I TGGCCA 1 cut(s) 729
MscI TGGCCA 1 cut(s) 729
MseI TTAA 5 cut(s) 111, 522, 533, 612, 636
Msp20I TGGCCA 1 cut(s) 729
MspCI CTTAAG 2 cut(s) 521, 635
MspI CCGG 2 cut(s) 310, 1160
MspR9I CCNGG 3 cut(s) 107, 976, 1028
MvaI CCWGG 3 cut(s) 107, 976, 1028
MwoI GCNNNNNNNGC 4 cut(s) 216, 1023, 1028, 1100
NdeII GATC 5 cut(s) 97, 139, 702, 928, 1078
NlaIII CATG 6 cut(s) 32, 307, 595, 790, 815, 950
NlaIV GGNNCC 4 cut(s) 413, 425, 1080, 1275
NspI RCATGY 1 cut(s) 815
PceI AGGCCT 2 cut(s) 382, 1026
PfeI GAWTC 2 cut(s) 448, 1061
PflMI CCANNNNNTGG 1 cut(s) 1112
PfoI TCCNGGA 1 cut(s) 974
PinAI ACCGGT 1 cut(s) 309
PkrI GCNGC 2 cut(s) 151, 1131
PleI GAGTC 2 cut(s) 1164, 1266
PpsI GAGTC 2 cut(s) 1164, 1266
PpuMI RGGWCCY 1 cut(s) 956
Psp5II RGGWCCY 1 cut(s) 956
Psp6I CCWGG 3 cut(s) 105, 974, 1026
PspGI CCWGG 3 cut(s) 105, 974, 1026
PspN4I GGNNCC 4 cut(s) 413, 425, 1080, 1275
PspPI GGNCC 6 cut(s) 423, 498, 956, 1016, 1178, 1273
PspPPI RGGWCCY 1 cut(s) 956
PstI CTGCAG 2 cut(s) 291, 1024
PsuI RGATCY 1 cut(s) 1078
RsaI GTAC 2 cut(s) 643, 739
RsaNI GTAC 2 cut(s) 642, 738
SaqAI TTAA 5 cut(s) 111, 522, 533, 612, 636
SatI GCNGC 2 cut(s) 150, 1130
Sau3AI GATC 5 cut(s) 97, 139, 702, 928, 1078
Sau96I GGNCC 6 cut(s) 423, 498, 956, 1016, 1178, 1273
SbfI CCTGCAGG 2 cut(s) 291, 1024
ScaI AGTACT 1 cut(s) 739
SchI GAGTC 2 cut(s) 1165, 1267
ScrFI CCNGG 3 cut(s) 107, 976, 1028
SdaI CCTGCAGG 2 cut(s) 291, 1024
SduI GDGCHC 2 cut(s) 296, 1056
SfaNI GCATC 5 cut(s) 112, 547, 985, 1081, 1114
SfcI CTRYAG 2 cut(s) 287, 1020
SfiI GGCCNNNNNGGCC 1 cut(s) 1023
SinI GGWCC 3 cut(s) 423, 956, 1178
SmlI CTYRAG 4 cut(s) 21, 257, 521, 635
SmoI CTYRAG 4 cut(s) 21, 257, 521, 635
SpeI ACTAGT 1 cut(s) 1244
Sse8387I CCTGCAGG 2 cut(s) 291, 1024
Sse9I AATT 7 cut(s) 143, 203, 223, 487, 603, 1110, 1186
SseBI AGGCCT 2 cut(s) 382, 1026
SsiI CCGC 1 cut(s) 758
StuI AGGCCT 2 cut(s) 382, 1026
StyD4I CCNGG 3 cut(s) 105, 974, 1026
StyI CCWWGG 4 cut(s) 41, 383, 494, 959
TaaI ACNGT 5 cut(s) 11, 240, 445, 646, 737
TaqI TCGA 1 cut(s) 547
TasI AATT 7 cut(s) 143, 203, 223, 487, 603, 1110, 1186
TatI WGTACW 2 cut(s) 641, 737
TfiI GAWTC 2 cut(s) 448, 1061
Tru1I TTAA 5 cut(s) 111, 522, 533, 612, 636
Tru9I TTAA 5 cut(s) 111, 522, 533, 612, 636
TscAI CASTG 1 cut(s) 94
TseI GCWGC 2 cut(s) 149, 1129
TspDTI ATGAA 5 cut(s) 320, 383, 681, 775, 1053
TspGWI ACGGA 1 cut(s) 1071
TspRI CASTG 1 cut(s) 94
Van91I CCANNNNNTGG 1 cut(s) 1112
Vha464I CTTAAG 2 cut(s) 521, 635
VpaK11BI GGWCC 3 cut(s) 423, 956, 1178
XagI CCTNNNNNAGG 1 cut(s) 177
XapI RAATTY 4 cut(s) 203, 223, 487, 603
XbaI TCTAGA 1 cut(s) 826
XceI RCATGY 1 cut(s) 815
XcmI CCANNNNNNNNNTGG 2 cut(s) 113, 501
XmaJI CCTAGG 1 cut(s) 41
ZrmI AGTACT 1 cut(s) 739
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.