Rmu_sc0006989.1_g000014

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006989.1
OG0000182
Physical Location & Seq
Forward (+)
29738 .. 35062
5325 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006989.1_g000014.1.cds

Sequence Viewer

Length: 1806 bp
atgactggttgtcggattccggtcactggacgccggactccggtcaccggtcgtgggaatccggtcaccagttgcaggagaccatggacggccactggagataataccatcaatattgataggtttgctgtccaagttgatatgccaccacccccacctgatttcaacaactactattccaggtttagtcttgtggggaaaatatttggagccttagtctctccagatgttgttctcagcaagtgttcggaactctggtataaccttaagggagtcatcaatatgactaggttggcaaacaattggtattgttttgagtttaacaatgaagatgatgtcctcttcatccttcaaaataggccttggtacattaggagcaggcttttctggatccaacggtggactccagagtttgatgccacaaccaatgttatcgaccgcttaatggtctgggttagactacctaatctgcctctacctcattggaatgagtcctccctcaagtacctaggacagtatcttggtagttttgttctggctgatgagctcaccctatcaggcaaaaaaacaatgtttgcaaggatcaagattgagctagatctgcgctatcctctgaaaaggacggtcttggttaataaccctgatggtaagtcctcaacttttgtattggtctcttgtgaagtaattttcgaggatgttgttgctggtacttcggttgctgcggttgctatacccgttcttgctacggccaaacagaaggatgttgttgttctctcctcggactcctctcaggaggtggatcagtaccttgatggttttgaagtccctaaatttgggatattgatgctctatcacggtcccattttgcttagtacttgctcaaaacaacaactgaaagctcgctcttttaaacttgaagcgatttggtttgatcaacctaattttgttgacattgttaaacagtcttggaatgtggattatgataatgacccttttaaaaatttcttaactgttacaggtgcttttacccacaaactggccttttggagcaaggagcaatatggaaaccttttcaggaacctcaatagtttacagcgtgatcttagtttttaccagaaccagttaatgatgtttcctacctccaattttttgcaaaacaaggttctgagtctcacccactctttcttacagttggagaaaacagaagcactttattgggcacagagagcaaaagccaattggttggcgctaggggataaaaataccaaattctttcagactcaagcgagtctaaggaaaggcatgaacaaaatccttaagattaaaaacaatctgggatattggtttgatagtcatgatgatattagtaaggtttttgttcaagaattccgggatagatttaaagcttctagctattttgatgtgcagacaacctttaattttactaaggttattgaacctattattggaaactcagacaatgactctcttatgaaaccagttactttggaagaaatccattcggctgtttctgctattaggggtcctaaggcaccgggtcctgatggaattcatgctctcttttaccagaaacattggaatctggttcaggataaaattagtaagatggttattgatttctttcaaaataatacctccctacagcctattaatcatactaatatttctttgattcctaaagttgatgctcctgagattgtcaatcattatagaccaataagcttgtgtaatgtttcttacaagatcatttctaaaattctggtcactagactgaagccctactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-RVT

Protein Analysis

601

Amino Acids

69.07

Weight (kDa)

9.17

Isoelectric Point (pI)

33.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000182)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21471 FvH4_1g27953 FvH4_1g28801 FvH4_2g14522 FvH4_3g04280 FvH4_3g28251 FvH4_4g07491 FvH4_4g30262
malus_domestica MD10G1046400.v1.1 MD10G1126900.v1.1 MD11G1236100.v1.1
prunus_persica Prupe.1G148300_v2.0.a1 Prupe.2G036800_v2.0.a1 Prupe.8G054600_v2.0.a1 Prupe.8G054700_v2.0.a1
pyrus_communis pycom05g05520 pycom08g11160 pycom13g29480
rosa_chinensis RchiOBHm_Chr7g0182921 RchiOBHm_Chr7g0230111
rosa_laevigata RLG00000000536 RLG00000001385 RLG00000001492 RLG00000002640 RLG00000003082 RLG00000005042 RLG00000007254 RLG00000007773 RLG00000008594 RLG00000009508 RLG00000010355 RLG00000013369 RLG00000014370 RLG00000014371 RLG00000018745 RLG00000020268 RLG00000020832 RLG00000022569 RLG00000028073 RLG00000028388 RLG00000028677 RLG00000035645
rosa_multiflora Rmu_co8277499.1_g000001 Rmu_co8500999.1_g000001 Rmu_sc0000014.1_g000025 Rmu_sc0000103.1_g000003 Rmu_sc0000168.1_g000019 Rmu_sc0000283.1_g000006 Rmu_sc0000693.1_g000080 Rmu_sc0000997.1_g000005 Rmu_sc0001228.1_g000005 Rmu_sc0001231.1_g000023 Rmu_sc0002833.1_g000037 Rmu_sc0002869.1_g000015 Rmu_sc0003545.1_g000003 Rmu_sc0003693.1_g000028 Rmu_sc0004000.1_g000022 Rmu_sc0004454.1_g000007 Rmu_sc0004976.1_g000036 Rmu_sc0005014.1_g000013 Rmu_sc0005046.1_g000013 Rmu_sc0005063.1_g000009 Rmu_sc0005652.1_g000002 Rmu_sc0005697.1_g000008 Rmu_sc0006989.1_g000014 Rmu_sc0008957.1_g000003 Rmu_sc0011659.1_g000001 Rmu_sc0027477.1_g000001 Rmu_ssc0000387.1_g000021
rosa_roxburghii Rroxscaffold_1G00020860 Rroxscaffold_1G00035780 Rroxscaffold_1G00051370 Rroxscaffold_2G00101730 Rroxscaffold_3G00230130 Rroxscaffold_4G00280070 Rroxscaffold_4G00281160 Rroxscaffold_4G00318780 Rroxscaffold_5G00341570 Rroxscaffold_5G00341580 Rroxscaffold_7G00191230 Rroxscaffold_7G00195880 Rroxscaffold_7G00195890 Rroxscaffold_7G00209080 Rroxscaffold_7G00209090
rosa_rugosa Rorug02G0170400 Rorug03G0234500 Rorug04G0045200 Rorug07G0191000
rosa_samantha Rh1AG012200 Rh1AG012300 Rh1AG021700 Rh1AG033800 Rh1AG033900 Rh1AG048100 Rh1AG087000 Rh1AG168600 Rh1CG004600 Rh2BG192700 Rh2BG200800 Rh2BG310200 Rh2BG356900 Rh2BG377900 Rh2BG378000 Rh2CG356300 Rh2DG394800 Rh3AG199000 Rh3AG258700 Rh3AG258800 Rh3AG324400 Rh3BG202300 Rh3BG202400 Rh3BG228800 Rh3BG318800 Rh3BG360400 Rh3BG368300 Rh3BG373700 Rh4AG071400 Rh4AG153700 Rh4AG224300 Rh4AG224400 Rh4CG044000 Rh4CG077200 Rh4CG077300 Rh4CG238700 Rh4CG238800 Rh4CG238900 Rh5BG367100 Rh5BG379500 Rh5BG379600 Rh5BG396700 Rh5BG412900 Rh5DG427200 Rh6AG015200 Rh6AG015300 Rh6AG122800 Rh6AG175600 Rh6AG187700 Rh6AG187800 Rh6AG260800 Rh6AG355000 Rh6BG074900 Rh6BG102300 Rh7AG127400 Rh7AG157500 Rh7AG157600 Rh7AG212200 Rh7AG331400 Rh7AG412000 Rh7CG055400 Rh7CG131400 Rh7CG131500 Rh7CG224300 Rh7CG267100 Rh7CG348800
rosa_wichuraiana Rw0G009820 Rw1G000520 Rw1G008820 Rw4G014110 Rw4G019370 Rw4G022440 Rw6G010550 Rw7G001520 Rw7G018400 Rw7G025210 Rw7G027910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1552
AccB7I CCANNNNNTGG 1 cut(s) 1036
AciI CCGC 2 cut(s) 439, 722
AclWI GGATC 4 cut(s) 385, 398, 590, 807
AcoI YGGCCR 2 cut(s) 90, 747
AcsI RAATTY 6 cut(s) 830, 1000, 1268, 1385, 1569, 1776
AcyI GRCGYC 1 cut(s) 31
AfaI GTAC 5 cut(s) 368, 506, 709, 806, 874
AfiI CCNNNNNNNGG 9 cut(s) 26, 40, 47, 54, 75, 445, 833, 1036, 1466
AflII CTTAAG 2 cut(s) 266, 1316
AgeI ACCGGT 1 cut(s) 47
AgsI TTSAA 7 cut(s) 166, 353, 821, 917, 1382, 1457, 1646
AhdI GACNNNNNGTC 1 cut(s) 9
AjnI CCWGG 1 cut(s) 179
AjuI GAANNNNNNNTTGG 2 cut(s) 1449, 1481
AluBI AGCT 6 cut(s) 547, 595, 899, 1406, 1413, 1743
AluI AGCT 6 cut(s) 547, 595, 899, 1406, 1413, 1743
Alw21I GWGCWC 1 cut(s) 549
Alw26I GTCTC 4 cut(s) 73, 223, 676, 1175
AlwI GGATC 4 cut(s) 385, 398, 590, 807
AoxI GGCC 4 cut(s) 90, 359, 747, 1038
ApeKI GCWGC 1 cut(s) 719
ApoI RAATTY 6 cut(s) 830, 1000, 1268, 1385, 1569, 1776
AseI ATTAAT 1 cut(s) 1671
AsiGI ACCGGT 1 cut(s) 47
AspA2I CCTAGG 1 cut(s) 508
AspLEI GCGC 2 cut(s) 606, 1249
AspS9I GGNCC 3 cut(s) 857, 1544, 1559
AsuC2I CCSGG 2 cut(s) 1391, 1557
AsuHPI GGTGA 4 cut(s) 37, 58, 541, 1165
AvaII GGWCC 3 cut(s) 857, 1544, 1559
AvrII CCTAGG 1 cut(s) 508
AxyI CCTNAGG 1 cut(s) 1548
BaeGI GKGCMC 1 cut(s) 1222
BaeI ACNNNNGTAYC 2 cut(s) 699, 732
BamHI GGATCC 1 cut(s) 390
BanI GGYRCC 1 cut(s) 1552
BanII GRGCYC 1 cut(s) 549
Bbv12I GWGCWC 1 cut(s) 549
BbvI GCAGC 1 cut(s) 706
BccI CCATC 5 cut(s) 116, 638, 806, 1559, 1621
BceAI ACGGC 2 cut(s) 105, 762
BciT130I CCWGG 1 cut(s) 181
BclI TGATCA 1 cut(s) 931
BcnI CCSGG 2 cut(s) 1391, 1557
BcoDI GTCTC 4 cut(s) 73, 223, 676, 1175
BfaI CTAG 7 cut(s) 288, 509, 596, 1250, 1410, 1788, 1804
BfmI CTRYAG 1 cut(s) 1661
BfoI RGCGCY 1 cut(s) 1250
BfrI CTTAAG 2 cut(s) 266, 1316
BglII AGATCT 1 cut(s) 598
BisI GCNGC 1 cut(s) 720
BlnI CCTAGG 1 cut(s) 508
BlsI GCNGC 1 cut(s) 721
BmcAI AGTACT 1 cut(s) 874
Bme1390I CCNGG 3 cut(s) 181, 1391, 1557
Bme18I GGWCC 3 cut(s) 857, 1544, 1559
BmeRI GACNNNNNGTC 1 cut(s) 9
BmgT120I GGNCC 3 cut(s) 857, 1544, 1559
BmiI GGNNCC 7 cut(s) 211, 392, 859, 1079, 1545, 1554, 1560
BmrFI CCNGG 3 cut(s) 181, 1391, 1557
BmsI GCATC 3 cut(s) 406, 834, 1696
BoxI GACNNNNGTC 1 cut(s) 41
BpmI CTGGAG 3 cut(s) 117, 207, 390
BpuEI CTTGAG 2 cut(s) 485, 1266
BpuMI CCSGG 2 cut(s) 1391, 1557
BsaHI GRCGYC 1 cut(s) 31
BsaI GGTCTC 2 cut(s) 73, 676
BsaJI CCNNGG 4 cut(s) 83, 362, 508, 777
BsaWI WCCGGW 4 cut(s) 19, 40, 47, 61
BsaXI ACNNNNNCTCC 2 cut(s) 201, 231
Bsc4I CCNNNNNNNGG 9 cut(s) 26, 40, 47, 54, 75, 445, 833, 1036, 1466
Bse118I RCCGGY 1 cut(s) 47
Bse1I ACTGG 7 cut(s) 10, 31, 69, 100, 1041, 1120, 1499
Bse21I CCTNAGG 1 cut(s) 1548
BseBI CCWGG 1 cut(s) 181
BseDI CCNNGG 4 cut(s) 83, 362, 508, 777
BseGI GGATG 3 cut(s) 345, 700, 766
BseLI CCNNNNNNNGG 9 cut(s) 26, 40, 47, 54, 75, 445, 833, 1036, 1466
BseMII CTCAG 5 cut(s) 250, 803, 1157, 1488, 1704
BseNI ACTGG 7 cut(s) 10, 31, 69, 100, 1041, 1120, 1499
BseRI GAGGAG 2 cut(s) 766, 775
BseSI GKGCMC 1 cut(s) 1222
BseXI GCAGC 1 cut(s) 706
BsgI GTGCAG 1 cut(s) 1445
Bsh1285I CGRYCG 2 cut(s) 52, 439
BshFI GGCC 4 cut(s) 92, 361, 749, 1040
BshNI GGYRCC 1 cut(s) 1552
BshTI ACCGGT 1 cut(s) 47
BsiEI CGRYCG 2 cut(s) 52, 439
BsiHKAI GWGCWC 1 cut(s) 549
BsiSI CCGG 7 cut(s) 20, 34, 41, 48, 62, 1390, 1556
BslFI GGGAC 2 cut(s) 809, 843
BslI CCNNNNNNNGG 9 cut(s) 26, 40, 47, 54, 75, 445, 833, 1036, 1466
BsmAI GTCTC 4 cut(s) 73, 223, 676, 1175
BsmFI GGGAC 2 cut(s) 809, 843
BsnI GGCC 4 cut(s) 92, 361, 749, 1040
Bso31I GGTCTC 2 cut(s) 73, 676
Bsp1286I GDGCHC 2 cut(s) 549, 1222
Bsp143I GATC 7 cut(s) 390, 582, 598, 799, 931, 1099, 1764
Bsp19I CCATGG 1 cut(s) 83
BspACI CCGC 2 cut(s) 439, 722
BspANI GGCC 4 cut(s) 92, 361, 749, 1040
BspCNI CTCAG 5 cut(s) 249, 802, 1158, 1487, 1705
BspHI TCATGA 1 cut(s) 1354
BspLI GGNNCC 7 cut(s) 211, 392, 859, 1079, 1545, 1554, 1560
BspPI GGATC 4 cut(s) 385, 398, 590, 807
BspT107I GGYRCC 1 cut(s) 1552
BspTI CTTAAG 2 cut(s) 266, 1316
BspTNI GGTCTC 2 cut(s) 73, 676
BsrFI RCCGGY 1 cut(s) 47
BsrI ACTGG 7 cut(s) 10, 31, 69, 100, 1041, 1120, 1499
BssAI RCCGGY 1 cut(s) 47
BssECI CCNNGG 4 cut(s) 83, 362, 508, 777
BssMI GATC 7 cut(s) 390, 582, 598, 799, 931, 1099, 1764
BssNI GRCGYC 1 cut(s) 31
BssT1I CCWWGG 3 cut(s) 83, 362, 508
Bst2UI CCWGG 1 cut(s) 181
Bst4CI ACNGT 7 cut(s) 399, 516, 625, 857, 963, 1012, 1191
Bst6I CTCTTC 1 cut(s) 347
BstACI GRCGYC 1 cut(s) 31
BstAFI CTTAAG 2 cut(s) 266, 1316
BstC8I GCNNGC 2 cut(s) 380, 901
BstDSI CCRYGG 1 cut(s) 83
BstEII GGTNACC 2 cut(s) 43, 64
BstF5I GGATG 3 cut(s) 345, 700, 766
BstH2I RGCGCY 1 cut(s) 1250
BstHHI GCGC 2 cut(s) 606, 1249
BstKTI GATC 7 cut(s) 393, 585, 601, 802, 934, 1102, 1767
BstMAI GTCTC 4 cut(s) 73, 223, 676, 1175
BstMBI GATC 7 cut(s) 390, 582, 598, 799, 931, 1099, 1764
BstMCI CGRYCG 2 cut(s) 52, 439
BstMWI GCNNNNNNNGC 4 cut(s) 601, 725, 1226, 1532
BstNI CCWGG 1 cut(s) 181
BstPAI GACNNNNGTC 1 cut(s) 41
BstPI GGTNACC 2 cut(s) 43, 64
BstSCI CCNGG 3 cut(s) 179, 1389, 1555
BstSFI CTRYAG 1 cut(s) 1661
BstSLI GKGCMC 1 cut(s) 1222
BstV1I GCAGC 1 cut(s) 706
BstX2I RGATCY 2 cut(s) 390, 598
BstXI CCANNNNNNTGG 1 cut(s) 1243
BstYI RGATCY 2 cut(s) 390, 598
Bsu36I CCTNAGG 1 cut(s) 1548
BsuRI GGCC 4 cut(s) 92, 361, 749, 1040
BtgI CCRYGG 1 cut(s) 83
BtsCI GGATG 3 cut(s) 345, 700, 766
BtsIMutI CAGTG 2 cut(s) 24, 93
Cac8I GCNNGC 2 cut(s) 380, 901
CciI TCATGA 1 cut(s) 1354
CfoI GCGC 2 cut(s) 606, 1249
Cfr10I RCCGGY 1 cut(s) 47
Cfr13I GGNCC 3 cut(s) 857, 1544, 1559
CseI GACGC 1 cut(s) 39
Csp6I GTAC 5 cut(s) 367, 505, 708, 805, 873
CspAI ACCGGT 1 cut(s) 47
CviAII CATG 4 cut(s) 84, 1303, 1355, 1574
CviQI GTAC 5 cut(s) 367, 505, 708, 805, 873
DpnI GATC 7 cut(s) 392, 584, 600, 801, 933, 1101, 1766
DpnII GATC 7 cut(s) 390, 582, 598, 799, 931, 1099, 1764
DraI TTTAAA 3 cut(s) 910, 997, 1402
DriI GACNNNNNGTC 1 cut(s) 9
EaeI YGGCCR 2 cut(s) 90, 747
Eam1104I CTCTTC 1 cut(s) 347
Eam1105I GACNNNNNGTC 1 cut(s) 9
EarI CTCTTC 1 cut(s) 347
Ecl136II GAGCTC 1 cut(s) 547
Eco130I CCWWGG 3 cut(s) 83, 362, 508
Eco147I AGGCCT 1 cut(s) 361
Eco24I GRGCYC 1 cut(s) 549
Eco31I GGTCTC 2 cut(s) 73, 676
Eco47I GGWCC 3 cut(s) 857, 1544, 1559
Eco53kI GAGCTC 1 cut(s) 547
Eco81I CCTNAGG 1 cut(s) 1548
Eco91I GGTNACC 2 cut(s) 43, 64
EcoICRI GAGCTC 1 cut(s) 547
EcoO109I RGGNCCY 2 cut(s) 1544, 1559
EcoO65I GGTNACC 2 cut(s) 43, 64
EcoRI GAATTC 2 cut(s) 1385, 1569
EcoRII CCWGG 1 cut(s) 179
EcoT14I CCWWGG 3 cut(s) 83, 362, 508
EcoT38I GRGCYC 1 cut(s) 549
ErhI CCWWGG 3 cut(s) 83, 362, 508
FaeI CATG 4 cut(s) 87, 1306, 1358, 1577
FaqI GGGAC 2 cut(s) 809, 843
FatI CATG 4 cut(s) 83, 1302, 1354, 1573
FbaI TGATCA 1 cut(s) 931
Fnu4HI GCNGC 1 cut(s) 720
FokI GGATG 3 cut(s) 332, 707, 773
FriOI GRGCYC 1 cut(s) 549
Fsp4HI GCNGC 1 cut(s) 720
FspBI CTAG 7 cut(s) 288, 509, 596, 1250, 1410, 1788, 1804
GlaI GCGC 2 cut(s) 605, 1248
GluI GCNGC 1 cut(s) 720
GsuI CTGGAG 3 cut(s) 117, 207, 390
HaeII RGCGCY 1 cut(s) 1250
HaeIII GGCC 4 cut(s) 92, 361, 749, 1040
HapII CCGG 7 cut(s) 20, 34, 41, 48, 62, 1390, 1556
HgaI GACGC 1 cut(s) 39
HhaI GCGC 2 cut(s) 606, 1249
Hin1I GRCGYC 1 cut(s) 31
Hin1II CATG 4 cut(s) 87, 1306, 1358, 1577
Hin6I GCGC 2 cut(s) 604, 1247
HinP1I GCGC 2 cut(s) 604, 1247
HincII GTYRAC 1 cut(s) 949
HindII GTYRAC 1 cut(s) 949
HindIII AAGCTT 2 cut(s) 1404, 1741
HpaII CCGG 7 cut(s) 20, 34, 41, 48, 62, 1390, 1556
HphI GGTGA 4 cut(s) 37, 58, 541, 1165
Hpy166II GTNNAC 3 cut(s) 402, 949, 1091
Hpy188I TCNGA 7 cut(s) 15, 250, 615, 781, 1167, 1278, 1477
Hpy8I GTNNAC 3 cut(s) 402, 949, 1091
HpyAV CCTTC 2 cut(s) 359, 751
HpyCH4III ACNGT 7 cut(s) 399, 516, 625, 857, 963, 1012, 1191
HpyCH4V TGCA 4 cut(s) 75, 578, 1153, 1426
HpyF10VI GCNNNNNNNGC 4 cut(s) 601, 725, 1226, 1532
Hsp92I GRCGYC 1 cut(s) 31
Hsp92II CATG 4 cut(s) 87, 1306, 1358, 1577
HspAI GCGC 2 cut(s) 604, 1247
Ksp22I TGATCA 1 cut(s) 931
Kzo9I GATC 7 cut(s) 390, 582, 598, 799, 931, 1099, 1764
LmnI GCTCC 5 cut(s) 209, 375, 1047, 1054, 1714
Lsp1109I GCAGC 1 cut(s) 706
LweI GCATC 3 cut(s) 406, 834, 1696
MaeI CTAG 7 cut(s) 288, 509, 596, 1250, 1410, 1788, 1804
MaeIII GTNAC 6 cut(s) 22, 43, 64, 1012, 1501, 1783
MalI GATC 7 cut(s) 392, 584, 600, 801, 933, 1101, 1766
MboI GATC 7 cut(s) 390, 582, 598, 799, 931, 1099, 1764
MboII GAAGA 3 cut(s) 334, 341, 1523
MfeI CAATTG 2 cut(s) 301, 1237
MflI RGATCY 2 cut(s) 390, 598
MhlI GDGCHC 2 cut(s) 549, 1222
MlyI GAGTC 9 cut(s) 31, 282, 397, 500, 776, 1177, 1273, 1297, 1478
MmeI TCCRAC 2 cut(s) 418, 1173
MslI CAYNNNNRTG 2 cut(s) 281, 486
MspCI CTTAAG 2 cut(s) 266, 1316
MspI CCGG 7 cut(s) 20, 34, 41, 48, 62, 1390, 1556
MspR9I CCNGG 3 cut(s) 181, 1391, 1557
MunI CAATTG 2 cut(s) 301, 1237
MvaI CCWGG 1 cut(s) 181
MwoI GCNNNNNNNGC 4 cut(s) 601, 725, 1226, 1532
NciI CCSGG 2 cut(s) 1391, 1557
NcoI CCATGG 1 cut(s) 83
NdeII GATC 7 cut(s) 390, 582, 598, 799, 931, 1099, 1764
NlaIII CATG 4 cut(s) 87, 1306, 1358, 1577
NlaIV GGNNCC 7 cut(s) 211, 392, 859, 1079, 1545, 1554, 1560
NmuCI GTSAC 4 cut(s) 22, 43, 64, 1783
PagI TCATGA 1 cut(s) 1354
PceI AGGCCT 1 cut(s) 361
PfeI GAWTC 4 cut(s) 16, 58, 1600, 1693
PflMI CCANNNNNTGG 1 cut(s) 1036
PfoI TCCNGGA 1 cut(s) 1389
PinAI ACCGGT 1 cut(s) 47
PkrI GCNGC 1 cut(s) 721
PleI GAGTC 9 cut(s) 31, 281, 397, 499, 776, 1176, 1273, 1296, 1478
PpsI GAGTC 9 cut(s) 31, 281, 397, 499, 776, 1176, 1273, 1296, 1478
PpuMI RGGWCCY 2 cut(s) 1544, 1559
PshAI GACNNNNGTC 1 cut(s) 41
PshBI ATTAAT 1 cut(s) 1671
Psp124BI GAGCTC 1 cut(s) 549
Psp5II RGGWCCY 2 cut(s) 1544, 1559
Psp6I CCWGG 1 cut(s) 179
PspEI GGTNACC 2 cut(s) 43, 64
PspGI CCWGG 1 cut(s) 179
PspN4I GGNNCC 7 cut(s) 211, 392, 859, 1079, 1545, 1554, 1560
PspPI GGNCC 3 cut(s) 857, 1544, 1559
PspPPI RGGWCCY 2 cut(s) 1544, 1559
PsuI RGATCY 2 cut(s) 390, 598
RsaI GTAC 5 cut(s) 368, 506, 709, 806, 874
RsaNI GTAC 5 cut(s) 367, 505, 708, 805, 873
RseI CAYNNNNRTG 2 cut(s) 281, 486
SacI GAGCTC 1 cut(s) 549
SatI GCNGC 1 cut(s) 720
Sau3AI GATC 7 cut(s) 390, 582, 598, 799, 931, 1099, 1764
Sau96I GGNCC 3 cut(s) 857, 1544, 1559
ScaI AGTACT 1 cut(s) 874
SchI GAGTC 9 cut(s) 31, 282, 397, 500, 776, 1177, 1273, 1297, 1478
ScrFI CCNGG 3 cut(s) 181, 1391, 1557
SduI GDGCHC 2 cut(s) 549, 1222
SfaNI GCATC 3 cut(s) 406, 834, 1696
SfcI CTRYAG 1 cut(s) 1661
SinI GGWCC 3 cut(s) 857, 1544, 1559
SmiMI CAYNNNNRTG 2 cut(s) 281, 486
SmlI CTYRAG 4 cut(s) 266, 500, 1281, 1316
SmoI CTYRAG 4 cut(s) 266, 500, 1281, 1316
SseBI AGGCCT 1 cut(s) 361
SsiI CCGC 2 cut(s) 439, 722
SspI AATATT 3 cut(s) 115, 204, 1684
SspMI CTAG 7 cut(s) 288, 509, 596, 1250, 1410, 1788, 1804
SstI GAGCTC 1 cut(s) 549
StuI AGGCCT 1 cut(s) 361
StyD4I CCNGG 3 cut(s) 179, 1389, 1555
StyI CCWWGG 3 cut(s) 83, 362, 508
TaaI ACNGT 7 cut(s) 399, 516, 625, 857, 963, 1012, 1191
TaqI TCGA 2 cut(s) 435, 690
TatI WGTACW 1 cut(s) 872
TfiI GAWTC 4 cut(s) 16, 58, 1600, 1693
TscAI CASTG 2 cut(s) 31, 100
TseFI GTSAC 4 cut(s) 22, 43, 64, 1783
TseI GCWGC 1 cut(s) 719
Tsp45I GTSAC 4 cut(s) 22, 43, 64, 1783
TspDTI ATGAA 5 cut(s) 334, 342, 1319, 1508, 1562
TspRI CASTG 2 cut(s) 31, 100
Van91I CCANNNNNTGG 1 cut(s) 1036
Vha464I CTTAAG 2 cut(s) 266, 1316
VpaK11BI GGWCC 3 cut(s) 857, 1544, 1559
VspI ATTAAT 1 cut(s) 1671
XapI RAATTY 6 cut(s) 830, 1000, 1268, 1385, 1569, 1776
XmaJI CCTAGG 1 cut(s) 508
XspI CTAG 7 cut(s) 288, 509, 596, 1250, 1410, 1788, 1804
ZrmI AGTACT 1 cut(s) 874
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.