Ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF4283 | PF14111 | 1 - 44 | 1.2e-07 | Domain of unknown function (DUF4283) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 45 |
| AfaI | GTAC | 1 cut(s) | 191 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 133 |
| AgsI | TTSAA | 1 cut(s) | 124 |
| AjnI | CCWGG | 3 cut(s) | 57, 71, 150 |
| Alw26I | GTCTC | 2 cut(s) | 140, 289 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 229 |
| Ama87I | CYCGRG | 1 cut(s) | 127 |
| AoxI | GGCC | 3 cut(s) | 68, 85, 204 |
| ArsI | GACNNNNNNTTYG | 3 cut(s) | 35, 67, 288 |
| AspS9I | GGNCC | 2 cut(s) | 69, 111 |
| AvaI | CYCGRG | 1 cut(s) | 127 |
| AvaII | GGWCC | 1 cut(s) | 111 |
| AxyI | CCTNAGG | 1 cut(s) | 246 |
| BccI | CCATC | 2 cut(s) | 6, 215 |
| BciT130I | CCWGG | 3 cut(s) | 59, 73, 152 |
| BciVI | GTATCC | 1 cut(s) | 130 |
| BcoDI | GTCTC | 2 cut(s) | 140, 289 |
| BfmI | CTRYAG | 2 cut(s) | 38, 185 |
| BfuAI | ACCTGC | 1 cut(s) | 45 |
| BfuI | GTATCC | 1 cut(s) | 130 |
| BmcAI | AGTACT | 1 cut(s) | 191 |
| Bme1390I | CCNGG | 3 cut(s) | 59, 73, 152 |
| Bme18I | GGWCC | 1 cut(s) | 111 |
| BmeT110I | CYCGRG | 1 cut(s) | 127 |
| BmgT120I | GGNCC | 2 cut(s) | 69, 111 |
| BmiI | GGNNCC | 1 cut(s) | 113 |
| BmrFI | CCNGG | 3 cut(s) | 59, 73, 152 |
| BoxI | GACNNNNGTC | 1 cut(s) | 109 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 239, 271 |
| BpmI | CTGGAG | 3 cut(s) | 44, 80, 214 |
| BsaI | GGTCTC | 2 cut(s) | 140, 289 |
| BsaJI | CCNNGG | 3 cut(s) | 71, 128, 150 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 133 |
| Bse1I | ACTGG | 1 cut(s) | 197 |
| Bse21I | CCTNAGG | 1 cut(s) | 246 |
| BseBI | CCWGG | 3 cut(s) | 59, 73, 152 |
| BseDI | CCNNGG | 3 cut(s) | 71, 128, 150 |
| BseGI | GGATG | 1 cut(s) | 17 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 133 |
| BseMII | CTCAG | 1 cut(s) | 237 |
| BseNI | ACTGG | 1 cut(s) | 197 |
| BseRI | GAGGAG | 2 cut(s) | 244, 303 |
| BshFI | GGCC | 3 cut(s) | 70, 87, 206 |
| BsiHKCI | CYCGRG | 1 cut(s) | 127 |
| BslFI | GGGAC | 1 cut(s) | 97 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 133 |
| BsmAI | GTCTC | 2 cut(s) | 140, 289 |
| BsmFI | GGGAC | 1 cut(s) | 97 |
| BsnI | GGCC | 3 cut(s) | 70, 87, 206 |
| Bso31I | GGTCTC | 2 cut(s) | 140, 289 |
| BsoBI | CYCGRG | 1 cut(s) | 127 |
| BspANI | GGCC | 3 cut(s) | 70, 87, 206 |
| BspCNI | CTCAG | 1 cut(s) | 238 |
| BspLI | GGNNCC | 1 cut(s) | 113 |
| BspMAI | CTGCAG | 2 cut(s) | 42, 189 |
| BspMI | ACCTGC | 1 cut(s) | 45 |
| BspTNI | GGTCTC | 2 cut(s) | 140, 289 |
| BsrI | ACTGG | 1 cut(s) | 197 |
| BssECI | CCNNGG | 3 cut(s) | 71, 128, 150 |
| Bst2UI | CCWGG | 3 cut(s) | 59, 73, 152 |
| Bst6I | CTCTTC | 1 cut(s) | 280 |
| BstDEI | CTNAG | 1 cut(s) | 246 |
| BstF5I | GGATG | 1 cut(s) | 17 |
| BstMAI | GTCTC | 2 cut(s) | 140, 289 |
| BstNI | CCWGG | 3 cut(s) | 59, 73, 152 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 109 |
| BstSCI | CCNGG | 3 cut(s) | 57, 71, 150 |
| BstSFI | CTRYAG | 2 cut(s) | 38, 185 |
| Bsu36I | CCTNAGG | 1 cut(s) | 246 |
| BsuI | GTATCC | 1 cut(s) | 130 |
| BsuRI | GGCC | 3 cut(s) | 70, 87, 206 |
| BtsCI | GGATG | 1 cut(s) | 17 |
| BveI | ACCTGC | 1 cut(s) | 45 |
| CaiI | CAGNNNCTG | 1 cut(s) | 229 |
| Cfr13I | GGNCC | 2 cut(s) | 69, 111 |
| Csp6I | GTAC | 1 cut(s) | 190 |
| CviAII | CATG | 1 cut(s) | 233 |
| CviJI | RGCY | 4 cut(s) | 70, 87, 169, 206 |
| CviKI_1 | RGCY | 4 cut(s) | 70, 87, 169, 206 |
| CviQI | GTAC | 1 cut(s) | 190 |
| DdeI | CTNAG | 1 cut(s) | 246 |
| Eam1104I | CTCTTC | 1 cut(s) | 280 |
| EarI | CTCTTC | 1 cut(s) | 280 |
| Eco31I | GGTCTC | 2 cut(s) | 140, 289 |
| Eco47I | GGWCC | 1 cut(s) | 111 |
| Eco81I | CCTNAGG | 1 cut(s) | 246 |
| Eco88I | CYCGRG | 1 cut(s) | 127 |
| EcoO109I | RGGNCCY | 1 cut(s) | 69 |
| EcoRII | CCWGG | 3 cut(s) | 57, 71, 150 |
| FaeI | CATG | 1 cut(s) | 236 |
| FaiI | YATR | 4 cut(s) | 99, 212, 234, 276 |
| FaqI | GGGAC | 1 cut(s) | 97 |
| FatI | CATG | 1 cut(s) | 232 |
| FokI | GGATG | 1 cut(s) | 24 |
| GsuI | CTGGAG | 3 cut(s) | 44, 80, 214 |
| HaeIII | GGCC | 3 cut(s) | 70, 87, 206 |
| Hin1II | CATG | 1 cut(s) | 236 |
| HinfI | GANTC | 2 cut(s) | 90, 251 |
| Hpy166II | GTNNAC | 1 cut(s) | 34 |
| Hpy188I | TCNGA | 2 cut(s) | 104, 259 |
| Hpy8I | GTNNAC | 1 cut(s) | 34 |
| HpyAV | CCTTC | 2 cut(s) | 126, 188 |
| HpyCH4IV | ACGT | 1 cut(s) | 45 |
| HpyCH4V | TGCA | 3 cut(s) | 40, 187, 232 |
| HpyF3I | CTNAG | 1 cut(s) | 246 |
| HpySE526I | ACGT | 1 cut(s) | 45 |
| Hsp92II | CATG | 1 cut(s) | 236 |
| LmnI | GCTCC | 1 cut(s) | 195 |
| MaeII | ACGT | 1 cut(s) | 45 |
| MboII | GAAGA | 2 cut(s) | 85, 297 |
| MluCI | AATT | 1 cut(s) | 237 |
| MlyI | GAGTC | 1 cut(s) | 245 |
| MmeI | TCCRAC | 1 cut(s) | 127 |
| MnlI | CCTC | 9 cut(s) | 123, 127, 192, 196, 241, 265, 275, 281, 284 |
| MspR9I | CCNGG | 3 cut(s) | 59, 73, 152 |
| MvaI | CCWGG | 3 cut(s) | 59, 73, 152 |
| NlaIII | CATG | 1 cut(s) | 236 |
| NlaIV | GGNNCC | 1 cut(s) | 113 |
| PfeI | GAWTC | 1 cut(s) | 90 |
| PfoI | TCCNGGA | 1 cut(s) | 57 |
| PleI | GAGTC | 1 cut(s) | 245 |
| PpsI | GAGTC | 1 cut(s) | 245 |
| PshAI | GACNNNNGTC | 1 cut(s) | 109 |
| Psp6I | CCWGG | 3 cut(s) | 57, 71, 150 |
| PspGI | CCWGG | 3 cut(s) | 57, 71, 150 |
| PspN4I | GGNNCC | 1 cut(s) | 113 |
| PspPI | GGNCC | 2 cut(s) | 69, 111 |
| PstI | CTGCAG | 2 cut(s) | 42, 189 |
| PstNI | CAGNNNCTG | 1 cut(s) | 229 |
| RsaI | GTAC | 1 cut(s) | 191 |
| RsaNI | GTAC | 1 cut(s) | 190 |
| Sau96I | GGNCC | 2 cut(s) | 69, 111 |
| SbfI | CCTGCAGG | 1 cut(s) | 42 |
| ScaI | AGTACT | 1 cut(s) | 191 |
| SchI | GAGTC | 1 cut(s) | 245 |
| ScrFI | CCNGG | 3 cut(s) | 59, 73, 152 |
| SdaI | CCTGCAGG | 1 cut(s) | 42 |
| SetI | ASST | 6 cut(s) | 39, 48, 180, 247, 301, 305 |
| SfcI | CTRYAG | 2 cut(s) | 38, 185 |
| SinI | GGWCC | 1 cut(s) | 111 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 42 |
| Sse9I | AATT | 1 cut(s) | 237 |
| StyD4I | CCNGG | 3 cut(s) | 57, 71, 150 |
| TaiI | ACGT | 1 cut(s) | 48 |
| TasI | AATT | 1 cut(s) | 237 |
| TatI | WGTACW | 1 cut(s) | 189 |
| TfiI | GAWTC | 1 cut(s) | 90 |
| VpaK11BI | GGWCC | 1 cut(s) | 111 |
| ZrmI | AGTACT | 1 cut(s) | 191 |