Rh2BG200800

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000182
Physical Location & Seq
Forward (+)
18448600 .. 18450485
1886 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG200800.1

Sequence Viewer

Length: 1863 bp
ATGGGACATAATAGGGTACGCGCCTCACGCGCCCCCTTTTGGGGGAATCTGGGGTTTCCTCTTCGATTTTCCAATCTCTTCCTCAATCTTCTCTTCTGGTTCATATGGATTAGCTCTTGGCGTGATTGTTGGTTGGAGATGTGCAGCCTTTTAGTCCATGCGGCTGATGTCTTCCTCACTACCCATCCTCATTATCCTACTCTTGGTGTCGAACACGAAGACGGCAGCAATCATACCCCTACAAAAGGACCTTTTACAGGATATCGAGTGCATTGGGTTGGTGGATCTGATCTTTCCAGTTCCCCCCACCGTTCGATTTCTTCGATGATCGCTACTGAAGGCTGCGAACTTCTTCGCCTTCCGTCCCAAGATTTCTACCTCACGCCTCTGCATTCTCGATTAACCCAGGGAGTAAATCTTATCCTATTTCTAGCTTCTATTTTTTTTCCTTGCGATGTTGTTGTTTGCCAAGCTTGTGATTTAATTGGTCTTGGTGTCAGCCCTGGGCTACGTAGACGATTGATCTTCTCTGTGTTTCTTGATTACCTAAATATAGATATTCTGCTTCTTGATTTTGCTTCCTTTTCTAGTTTCCTAGGAGATTTGTTGGATTCCCCTTCTCGGAAGTCCAATGTCAGAACCGTGGGGGGTTGCAACTTTGTGTGGCCTCCAAGGTCCCTCCTCAGTATAAATTACCTGGCTGTTATCCTGTTTTTTCACCCTGCTCTCTACCTACTTAGCATCCTGTTTGCTACCCACATCATGGCTTTCAACCCTGTTTCTCAAGCTCACCTGGCTGCTACCATTCGAAAACCTTTTCCAGCTCGCCAATATTTCCCTTTCCCTCGAAACCAGAATGGGTCTGAGTCCATCCCAGTTGTTATAGGCGATAATACCATCAATATTGATAGGTTTGCTGTCCACGTTGATATGCCACCATCCCCTCCAGATTTTGACACCCACTACTCTAGGTTCTGTCTTGTGGGGAAAATATTTGGAGCCTTAGTCACTCCAGATGTTGTTCTCAGCAAGTGTTCGGAATTCTGGAATAACCTTAAGGGAGCCATCAATATGACCAGGTTGGCAAACAATTGGTTTTGCTTTAAGTTCAACAACGAAGAGGATGTCCTACTCATCCTTGACAATAGGCCTTGGTACATTAGGAGCAGGCTTTTCAGGATCCAAAGATGGACCCCAGAGTTTGATGCCACAACCACTGTTATTGACCGCTTAATGGTCTGGGTCAGACTACCTAATCTGCCTCTACCTCATTGGAATGAGTCCTCCCTCAGGCACCTAGGTCAATATTTGGGTAGTTATGTTGTGGCTGATGAGCTTACCCTATCAGCCAAGAAAATGATGTTTGCACGGATCAAGATTGAGTTGGATCTGCGCTATCCTCTGAAAAGAACGGTCTTGGTCAATAATCCAGATGGTAAGTCTTCAACATTGGTTTTGGTCTCTTATGAAGTAATTTTCGAGGTGTGTTTTAGATGTGGCCTCTACCACCAAAAGAATCAAGTCTGTCCTCGAAGAAATATTAAGGACAGTTTTTTCATGGTTGAAAGAATGGAGAATGAGCAGGCGGTTTATCCAGCAGACATGGCTAACAATGAGTTCATTCAGCCTCTTCTTTCAAATGATATCTCTATTATCTTCCCGCAACCAATGTTTAATTACTATGATGCGGGAAATTATGGAACCAATTCGGGAACCTTTTCTGCAAACGTTGGAGATCAGGATCTAGGTCAAGACCATGGTCCTTGGAAGATCGTTTCTCGACGGGGAAAGGGGAAAGGGGAAAGGTCAGTTTTTCCCAAAGAATGGTCCCTTAAAACAGGGTCCCATTACTGCCAAACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-RVT

Protein Analysis

620

Amino Acids

70.8

Weight (kDa)

8.45

Isoelectric Point (pI)

45.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 325 - 404 2.9e-14 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000182)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21471 FvH4_1g27953 FvH4_1g28801 FvH4_2g14522 FvH4_3g04280 FvH4_3g28251 FvH4_4g07491 FvH4_4g30262
malus_domestica MD10G1046400.v1.1 MD10G1126900.v1.1 MD11G1236100.v1.1
prunus_persica Prupe.1G148300_v2.0.a1 Prupe.2G036800_v2.0.a1 Prupe.8G054600_v2.0.a1 Prupe.8G054700_v2.0.a1
pyrus_communis pycom05g05520 pycom08g11160 pycom13g29480
rosa_chinensis RchiOBHm_Chr7g0182921 RchiOBHm_Chr7g0230111
rosa_laevigata RLG00000000536 RLG00000001385 RLG00000001492 RLG00000002640 RLG00000003082 RLG00000005042 RLG00000007254 RLG00000007773 RLG00000008594 RLG00000009508 RLG00000010355 RLG00000013369 RLG00000014370 RLG00000014371 RLG00000018745 RLG00000020268 RLG00000020832 RLG00000022569 RLG00000028073 RLG00000028388 RLG00000028677 RLG00000035645
rosa_multiflora Rmu_co8277499.1_g000001 Rmu_co8500999.1_g000001 Rmu_sc0000014.1_g000025 Rmu_sc0000103.1_g000003 Rmu_sc0000168.1_g000019 Rmu_sc0000283.1_g000006 Rmu_sc0000693.1_g000080 Rmu_sc0000997.1_g000005 Rmu_sc0001228.1_g000005 Rmu_sc0001231.1_g000023 Rmu_sc0002833.1_g000037 Rmu_sc0002869.1_g000015 Rmu_sc0003545.1_g000003 Rmu_sc0003693.1_g000028 Rmu_sc0004000.1_g000022 Rmu_sc0004454.1_g000007 Rmu_sc0004976.1_g000036 Rmu_sc0005014.1_g000013 Rmu_sc0005046.1_g000013 Rmu_sc0005063.1_g000009 Rmu_sc0005652.1_g000002 Rmu_sc0005697.1_g000008 Rmu_sc0006989.1_g000014 Rmu_sc0008957.1_g000003 Rmu_sc0011659.1_g000001 Rmu_sc0027477.1_g000001 Rmu_ssc0000387.1_g000021
rosa_roxburghii Rroxscaffold_1G00020860 Rroxscaffold_1G00035780 Rroxscaffold_1G00051370 Rroxscaffold_2G00101730 Rroxscaffold_3G00230130 Rroxscaffold_4G00280070 Rroxscaffold_4G00281160 Rroxscaffold_4G00318780 Rroxscaffold_5G00341570 Rroxscaffold_5G00341580 Rroxscaffold_7G00191230 Rroxscaffold_7G00195880 Rroxscaffold_7G00195890 Rroxscaffold_7G00209080 Rroxscaffold_7G00209090
rosa_rugosa Rorug02G0170400 Rorug03G0234500 Rorug04G0045200 Rorug07G0191000
rosa_samantha Rh1AG012200 Rh1AG012300 Rh1AG021700 Rh1AG033800 Rh1AG033900 Rh1AG048100 Rh1AG087000 Rh1AG168600 Rh1CG004600 Rh2BG192700 Rh2BG200800 Rh2BG310200 Rh2BG356900 Rh2BG377900 Rh2BG378000 Rh2CG356300 Rh2DG394800 Rh3AG199000 Rh3AG258700 Rh3AG258800 Rh3AG324400 Rh3BG202300 Rh3BG202400 Rh3BG228800 Rh3BG318800 Rh3BG360400 Rh3BG368300 Rh3BG373700 Rh4AG071400 Rh4AG153700 Rh4AG224300 Rh4AG224400 Rh4CG044000 Rh4CG077200 Rh4CG077300 Rh4CG238700 Rh4CG238800 Rh4CG238900 Rh5BG367100 Rh5BG379500 Rh5BG379600 Rh5BG396700 Rh5BG412900 Rh5DG427200 Rh6AG015200 Rh6AG015300 Rh6AG122800 Rh6AG175600 Rh6AG187700 Rh6AG187800 Rh6AG260800 Rh6AG355000 Rh6BG074900 Rh6BG102300 Rh7AG127400 Rh7AG157500 Rh7AG157600 Rh7AG212200 Rh7AG331400 Rh7AG412000 Rh7CG055400 Rh7CG131400 Rh7CG131500 Rh7CG224300 Rh7CG267100 Rh7CG348800
rosa_wichuraiana Rw0G009820 Rw1G000520 Rw1G008820 Rw4G014110 Rw4G019370 Rw4G022440 Rw6G010550 Rw7G001520 Rw7G018400 Rw7G025210 Rw7G027910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1293
AccB7I CCANNNNNTGG 2 cut(s) 763, 1824
AccI GTMKAC 1 cut(s) 514
AccII CGCG 2 cut(s) 21, 30
AciI CCGC 5 cut(s) 161, 1228, 1586, 1661, 1688
AclI AACGTT 1 cut(s) 1728
AclWI GGATC 6 cut(s) 292, 1174, 1187, 1379, 1395, 1749
AcsI RAATTY 1 cut(s) 1040
AcuI CTGAAG 1 cut(s) 357
AfaI GTAC 2 cut(s) 18, 1157
AflII CTTAAG 1 cut(s) 1055
AgsI TTSAA 5 cut(s) 772, 1111, 1446, 1565, 1638
AjnI CCWGG 5 cut(s) 405, 502, 696, 792, 1076
AluBI AGCT 6 cut(s) 114, 434, 473, 788, 824, 1336
AluI AGCT 6 cut(s) 114, 434, 473, 788, 824, 1336
Alw26I GTCTC 1 cut(s) 1465
AlwI GGATC 6 cut(s) 292, 1174, 1187, 1379, 1395, 1749
AoxI GGCC 3 cut(s) 665, 1148, 1498
ApeKI GCWGC 4 cut(s) 144, 225, 342, 797
ApoI RAATTY 1 cut(s) 1040
ArsI GACNNNNNNTTYG 2 cut(s) 1110, 1142
Asp700I GAANNNNTTC 3 cut(s) 351, 1705, 1717
AspA2I CCTAGG 2 cut(s) 595, 1297
AspLEI GCGC 3 cut(s) 23, 32, 1395
AspS9I GGNCC 6 cut(s) 248, 675, 1191, 1760, 1827, 1842
AsuHPI GGTGA 2 cut(s) 710, 782
AsuII TTCGAA 1 cut(s) 808
AvaII GGWCC 6 cut(s) 248, 675, 1191, 1760, 1827, 1842
AvrII CCTAGG 2 cut(s) 595, 1297
AxyI CCTNAGG 1 cut(s) 1289
BamHI GGATCC 1 cut(s) 1179
BanI GGYRCC 1 cut(s) 1293
BbsI GAAGAC 3 cut(s) 163, 225, 1434
BbvI GCAGC 4 cut(s) 156, 237, 329, 784
BccI CCATC 7 cut(s) 192, 878, 905, 946, 1073, 1182, 1427
BceAI ACGGC 1 cut(s) 238
BciT130I CCWGG 5 cut(s) 407, 504, 698, 794, 1078
BcoDI GTCTC 1 cut(s) 1465
BfaI CTAG 6 cut(s) 431, 588, 596, 969, 1298, 1745
BfrI CTTAAG 1 cut(s) 1055
BisI GCNGC 5 cut(s) 145, 162, 226, 343, 798
BlnI CCTAGG 2 cut(s) 595, 1297
BlsI GCNGC 5 cut(s) 146, 163, 227, 344, 799
Bme1390I CCNGG 5 cut(s) 407, 504, 698, 794, 1078
Bme18I GGWCC 6 cut(s) 248, 675, 1191, 1760, 1827, 1842
BmgT120I GGNCC 6 cut(s) 248, 675, 1191, 1760, 1827, 1842
BmrFI CCNGG 5 cut(s) 407, 504, 698, 794, 1078
BmrI ACTGGG 1 cut(s) 869
BmsI GCATC 3 cut(s) 750, 1195, 1675
BmuI ACTGGG 1 cut(s) 869
BoxI GACNNNNGTC 1 cut(s) 1758
BpiI GAAGAC 3 cut(s) 163, 225, 1434
BpmI CTGGAG 2 cut(s) 930, 996
Bpu14I TTCGAA 1 cut(s) 808
BpuEI CTTGAG 1 cut(s) 768
BsaAI YACGTR 1 cut(s) 512
BsaBI GATNNNNATC 1 cut(s) 1740
BsaI GGTCTC 1 cut(s) 1465
BsaXI ACNNNNNCTCC 2 cut(s) 990, 1020
Bse1I ACTGG 2 cut(s) 297, 875
Bse21I CCTNAGG 1 cut(s) 1289
Bse8I GATNNNNATC 1 cut(s) 1740
BseBI CCWGG 5 cut(s) 407, 504, 698, 794, 1078
BseGI GGATG 6 cut(s) 184, 741, 870, 938, 1129, 1134
BseJI GATNNNNATC 1 cut(s) 1740
BseMII CTCAG 4 cut(s) 697, 855, 1039, 1303
BseNI ACTGG 2 cut(s) 297, 875
BseRI GAGGAG 1 cut(s) 671
BseXI GCAGC 4 cut(s) 156, 237, 329, 784
BsgI GTGCAG 1 cut(s) 163
Bsh1236I CGCG 2 cut(s) 21, 30
BshFI GGCC 3 cut(s) 667, 1150, 1500
BshNI GGYRCC 1 cut(s) 1293
BslFI GGGAC 5 cut(s) 18, 349, 661, 1813, 1828
BsmAI GTCTC 1 cut(s) 1465
BsmFI GGGAC 5 cut(s) 18, 349, 661, 1813, 1828
BsmI GAATGC 1 cut(s) 391
BsnI GGCC 3 cut(s) 667, 1150, 1500
Bso31I GGTCTC 1 cut(s) 1465
Bsp119I TTCGAA 1 cut(s) 808
Bsp19I CCATGG 1 cut(s) 1756
BspACI CCGC 5 cut(s) 161, 1228, 1586, 1661, 1688
BspANI GGCC 3 cut(s) 667, 1150, 1500
BspCNI CTCAG 4 cut(s) 696, 856, 1038, 1302
BspFNI CGCG 2 cut(s) 21, 30
BspPI GGATC 6 cut(s) 292, 1174, 1187, 1379, 1395, 1749
BspT104I TTCGAA 1 cut(s) 808
BspT107I GGYRCC 1 cut(s) 1293
BspTI CTTAAG 1 cut(s) 1055
BspTNI GGTCTC 1 cut(s) 1465
BsrI ACTGG 2 cut(s) 297, 875
BssT1I CCWWGG 6 cut(s) 595, 671, 1151, 1297, 1756, 1763
Bst2UI CCWGG 5 cut(s) 407, 504, 698, 794, 1078
Bst4CI ACNGT 5 cut(s) 311, 643, 1219, 1414, 1550
Bst6I CTCTTC 5 cut(s) 66, 83, 98, 1113, 1635
BstAFI CTTAAG 1 cut(s) 1055
BstBAI YACGTR 1 cut(s) 512
BstBI TTCGAA 1 cut(s) 808
BstC8I GCNNGC 3 cut(s) 826, 1169, 1584
BstDEI CTNAG 6 cut(s) 683, 737, 864, 1003, 1025, 1289
BstDSI CCRYGG 2 cut(s) 642, 1756
BstENI CCTNNNNNAGG 3 cut(s) 243, 255, 1288
BstF5I GGATG 6 cut(s) 184, 741, 870, 938, 1129, 1134
BstFNI CGCG 2 cut(s) 21, 30
BstHHI GCGC 3 cut(s) 23, 32, 1395
BstMAI GTCTC 1 cut(s) 1465
BstMWI GCNNNNNNNGC 4 cut(s) 27, 29, 794, 1604
BstNI CCWGG 5 cut(s) 407, 504, 698, 794, 1078
BstPAI GACNNNNGTC 1 cut(s) 1758
BstSCI CCNGG 5 cut(s) 405, 502, 696, 792, 1076
BstSNI TACGTA 1 cut(s) 512
BstUI CGCG 2 cut(s) 21, 30
BstV1I GCAGC 4 cut(s) 156, 237, 329, 784
BstV2I GAAGAC 3 cut(s) 163, 225, 1434
BstX2I RGATCY 4 cut(s) 284, 1179, 1387, 1741
BstYI RGATCY 4 cut(s) 284, 1179, 1387, 1741
Bsu36I CCTNAGG 1 cut(s) 1289
BsuRI GGCC 3 cut(s) 667, 1150, 1500
BtgI CCRYGG 2 cut(s) 642, 1756
BtgZI GCGATG 1 cut(s) 468
BtsCI GGATG 6 cut(s) 184, 741, 870, 938, 1129, 1134
BtsIMutI CAGTG 1 cut(s) 1215
Cac8I GCNNGC 3 cut(s) 826, 1169, 1584
CfoI GCGC 3 cut(s) 23, 32, 1395
Cfr13I GGNCC 6 cut(s) 248, 675, 1191, 1760, 1827, 1842
CsiI ACCWGGT 1 cut(s) 1076
Csp6I GTAC 2 cut(s) 17, 1156
CspCI CAANNNNNGTGG 2 cut(s) 1204, 1239
CviAII CATG 5 cut(s) 158, 763, 1558, 1603, 1757
CviQI GTAC 2 cut(s) 17, 1156
DdeI CTNAG 6 cut(s) 683, 737, 864, 1003, 1025, 1289
Eam1104I CTCTTC 5 cut(s) 66, 83, 98, 1113, 1635
EarI CTCTTC 5 cut(s) 66, 83, 98, 1113, 1635
Eco105I TACGTA 1 cut(s) 512
Eco130I CCWWGG 6 cut(s) 595, 671, 1151, 1297, 1756, 1763
Eco147I AGGCCT 1 cut(s) 1150
Eco31I GGTCTC 1 cut(s) 1465
Eco32I GATATC 2 cut(s) 263, 1645
Eco47I GGWCC 6 cut(s) 248, 675, 1191, 1760, 1827, 1842
Eco57I CTGAAG 1 cut(s) 357
Eco81I CCTNAGG 1 cut(s) 1289
EcoNI CCTNNNNNAGG 3 cut(s) 243, 255, 1288
EcoO109I RGGNCCY 3 cut(s) 248, 675, 1842
EcoRI GAATTC 1 cut(s) 1040
EcoRII CCWGG 5 cut(s) 405, 502, 696, 792, 1076
EcoRV GATATC 2 cut(s) 263, 1645
EcoT14I CCWWGG 6 cut(s) 595, 671, 1151, 1297, 1756, 1763
ErhI CCWWGG 6 cut(s) 595, 671, 1151, 1297, 1756, 1763
FaeI CATG 5 cut(s) 161, 766, 1561, 1606, 1760
FaqI GGGAC 5 cut(s) 18, 349, 661, 1813, 1828
FatI CATG 5 cut(s) 157, 762, 1557, 1602, 1756
FauI CCCGC 2 cut(s) 1668, 1681
FauNDI CATATG 1 cut(s) 104
FblI GTMKAC 1 cut(s) 514
Fnu4HI GCNGC 5 cut(s) 145, 162, 226, 343, 798
FokI GGATG 6 cut(s) 171, 728, 857, 925, 1121, 1136
Fsp4HI GCNGC 5 cut(s) 145, 162, 226, 343, 798
FspBI CTAG 6 cut(s) 431, 588, 596, 969, 1298, 1745
GlaI GCGC 3 cut(s) 22, 31, 1394
GluI GCNGC 5 cut(s) 145, 162, 226, 343, 798
GsuI CTGGAG 2 cut(s) 930, 996
HaeIII GGCC 3 cut(s) 667, 1150, 1500
HhaI GCGC 3 cut(s) 23, 32, 1395
Hin1II CATG 5 cut(s) 161, 766, 1561, 1606, 1760
Hin6I GCGC 3 cut(s) 21, 30, 1393
HinP1I GCGC 3 cut(s) 21, 30, 1393
HindIII AAGCTT 1 cut(s) 471
HinfI GANTC 5 cut(s) 46, 611, 866, 1280, 1516
HphI GGTGA 2 cut(s) 710, 782
Hpy166II GTNNAC 2 cut(s) 515, 922
Hpy188I TCNGA 7 cut(s) 289, 624, 638, 865, 1039, 1247, 1404
Hpy8I GTNNAC 2 cut(s) 515, 922
Hpy99I CGWCG 1 cut(s) 1785
HpyAV CCTTC 3 cut(s) 332, 368, 627
HpyCH4III ACNGT 5 cut(s) 311, 643, 1219, 1414, 1550
HpyCH4IV ACGT 3 cut(s) 511, 924, 1728
HpyCH4V TGCA 6 cut(s) 144, 271, 391, 654, 1367, 1724
HpyF10VI GCNNNNNNNGC 4 cut(s) 27, 29, 794, 1604
HpyF3I CTNAG 6 cut(s) 683, 737, 864, 1003, 1025, 1289
HpySE526I ACGT 3 cut(s) 511, 924, 1728
Hsp92II CATG 5 cut(s) 161, 766, 1561, 1606, 1760
HspAI GCGC 3 cut(s) 21, 30, 1393
KflI GGGWCCC 1 cut(s) 1842
LmnI GCTCC 3 cut(s) 998, 1061, 1164
Lsp1109I GCAGC 4 cut(s) 156, 237, 329, 784
LweI GCATC 3 cut(s) 750, 1195, 1675
MabI ACCWGGT 1 cut(s) 1076
MaeI CTAG 6 cut(s) 431, 588, 596, 969, 1298, 1745
MaeII ACGT 3 cut(s) 511, 924, 1728
MaeIII GTNAC 1 cut(s) 1006
MfeI CAATTG 1 cut(s) 1090
MflI RGATCY 4 cut(s) 284, 1179, 1387, 1741
MluCI AATT 8 cut(s) 483, 691, 1040, 1090, 1473, 1675, 1693, 1705
MlyI GAGTC 2 cut(s) 875, 1289
MmeI TCCRAC 4 cut(s) 114, 588, 1365, 1711
MroXI GAANNNNTTC 3 cut(s) 351, 1705, 1717
MseI TTAA 8 cut(s) 401, 482, 1056, 1104, 1232, 1542, 1674, 1833
MslI CAYNNNNRTG 2 cut(s) 1070, 1275
MspCI CTTAAG 1 cut(s) 1055
MspR9I CCNGG 5 cut(s) 407, 504, 698, 794, 1078
MunI CAATTG 1 cut(s) 1090
Mva1269I GAATGC 1 cut(s) 391
MvaI CCWGG 5 cut(s) 407, 504, 698, 794, 1078
MvnI CGCG 2 cut(s) 21, 30
MwoI GCNNNNNNNGC 4 cut(s) 27, 29, 794, 1604
NcoI CCATGG 1 cut(s) 1756
NdeI CATATG 1 cut(s) 104
NlaIII CATG 5 cut(s) 161, 766, 1561, 1606, 1760
NmuCI GTSAC 1 cut(s) 1006
NspV TTCGAA 1 cut(s) 808
PasI CCCWGGG 2 cut(s) 406, 503
PceI AGGCCT 1 cut(s) 1150
PcsI WCGNNNNNNNCGW 1 cut(s) 320
PctI GAATGC 1 cut(s) 391
PdmI GAANNNNTTC 3 cut(s) 351, 1705, 1717
PfeI GAWTC 3 cut(s) 46, 611, 1516
PflMI CCANNNNNTGG 2 cut(s) 763, 1824
PkrI GCNGC 5 cut(s) 146, 163, 227, 344, 799
PleI GAGTC 2 cut(s) 874, 1288
PpsI GAGTC 2 cut(s) 874, 1288
Ppu21I YACGTR 1 cut(s) 512
PpuMI RGGWCCY 3 cut(s) 248, 675, 1842
PshAI GACNNNNGTC 1 cut(s) 1758
Psp1406I AACGTT 1 cut(s) 1728
Psp5II RGGWCCY 3 cut(s) 248, 675, 1842
Psp6I CCWGG 5 cut(s) 405, 502, 696, 792, 1076
PspGI CCWGG 5 cut(s) 405, 502, 696, 792, 1076
PspPI GGNCC 6 cut(s) 248, 675, 1191, 1760, 1827, 1842
PspPPI RGGWCCY 3 cut(s) 248, 675, 1842
PsuI RGATCY 4 cut(s) 284, 1179, 1387, 1741
RsaI GTAC 2 cut(s) 18, 1157
RsaNI GTAC 2 cut(s) 17, 1156
RseI CAYNNNNRTG 2 cut(s) 1070, 1275
SaqAI TTAA 8 cut(s) 401, 482, 1056, 1104, 1232, 1542, 1674, 1833
SatI GCNGC 5 cut(s) 145, 162, 226, 343, 798
Sau96I GGNCC 6 cut(s) 248, 675, 1191, 1760, 1827, 1842
SchI GAGTC 2 cut(s) 875, 1289
ScrFI CCNGG 5 cut(s) 407, 504, 698, 794, 1078
SexAI ACCWGGT 1 cut(s) 1076
SfaNI GCATC 3 cut(s) 750, 1195, 1675
SfuI TTCGAA 1 cut(s) 808
SinI GGWCC 6 cut(s) 248, 675, 1191, 1760, 1827, 1842
SmiMI CAYNNNNRTG 2 cut(s) 1070, 1275
SmlI CTYRAG 2 cut(s) 783, 1055
SmoI CTYRAG 2 cut(s) 783, 1055
SnaBI TACGTA 1 cut(s) 512
Sse9I AATT 8 cut(s) 483, 691, 1040, 1090, 1473, 1675, 1693, 1705
SseBI AGGCCT 1 cut(s) 1150
SsiI CCGC 5 cut(s) 161, 1228, 1586, 1661, 1688
SspI AATATT 5 cut(s) 833, 904, 993, 1307, 1540
SspMI CTAG 6 cut(s) 431, 588, 596, 969, 1298, 1745
StuI AGGCCT 1 cut(s) 1150
StyD4I CCNGG 5 cut(s) 405, 502, 696, 792, 1076
StyI CCWWGG 6 cut(s) 595, 671, 1151, 1297, 1756, 1763
TaaI ACNGT 5 cut(s) 311, 643, 1219, 1414, 1550
TaiI ACGT 3 cut(s) 514, 927, 1731
TasI AATT 8 cut(s) 483, 691, 1040, 1090, 1473, 1675, 1693, 1705
TauI GCSGC 1 cut(s) 164
TfiI GAWTC 3 cut(s) 46, 611, 1516
Tru1I TTAA 8 cut(s) 401, 482, 1056, 1104, 1232, 1542, 1674, 1833
Tru9I TTAA 8 cut(s) 401, 482, 1056, 1104, 1232, 1542, 1674, 1833
TscAI CASTG 1 cut(s) 1222
TseFI GTSAC 1 cut(s) 1006
TseI GCWGC 4 cut(s) 144, 225, 342, 797
Tsp45I GTSAC 1 cut(s) 1006
TspDTI ATGAA 4 cut(s) 91, 1482, 1546, 1609
TspGWI ACGGA 2 cut(s) 351, 1384
TspRI CASTG 1 cut(s) 1222
Van91I CCANNNNNTGG 2 cut(s) 763, 1824
Vha464I CTTAAG 1 cut(s) 1055
VpaK11BI GGWCC 6 cut(s) 248, 675, 1191, 1760, 1827, 1842
XagI CCTNNNNNAGG 3 cut(s) 243, 255, 1288
XapI RAATTY 1 cut(s) 1040
XmaJI CCTAGG 2 cut(s) 595, 1297
XmiI GTMKAC 1 cut(s) 514
XmnI GAANNNNTTC 3 cut(s) 351, 1705, 1717
XspI CTAG 6 cut(s) 431, 588, 596, 969, 1298, 1745
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.