FvH4_5g05700

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000101
Physical Location & Seq
Reverse (-)
3390614 .. 3392036
1423 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g05700.t1

Sequence Viewer

Length: 1107 bp
ATGGCTGATTCTGCTGCGGATGACTTGGAGAAGCCTCCGAAGGACTTGCGAAAAGTCCTGGCCGAGATGCGTACCGAGGAGGCTCTGATCAGCAGCACTACCAAGATGGTGGAGGGCTTGTTAAGGGACGGCTTCATGAACGTGGGCTTGGAGATTGGGGCCAAGATTGAGGACACCAATGAAGTTCCCTGGGTTGTCATCGACGCTGCTGTCATCGAGTACTACATCAATGCTGTCGGGGACAGGACCAAGGATGCTCTCAGAGTGTTCAAGCACATCTCATTTTCTGGGGTGGAACCAAATGCCTACACGTATGGCATTGTCATCAAGGCTCTTGCTGCTGCAGACCTTAAGAAGAACCCCGATTTTGTTGGTTATGCGAAGAAGTACTTAGTGGAGATGTTGGAGAGGGGAATGCAGCCGAATGAGGAGACTTATGAGGCTGTGTTGGATGGCATTGGCCGTGGTGAGAACAAGGCCGAGGCTGAGGAGGAGCGCAGGGAGTTTGTGGAGAATATGAAAGCAAAGGGGTTTGTGTTGGTGCTCCGTGCTCCAGAAGGAGGCTGTGGAGATGGCTGGACCTTCAATCTTGAAAAAGGGCTCAATAAGGAAGCCAAAGAGCTATTTAAGCCTCTATTAGAGACAGCCATACTGCCTGATGAGGCTATCTTCACCATAGTCATCCATATCTATGGCGCTGGCAACACCATAGGACATGCTTTGAAGGCCCCATGCACTTACAATTTACTCATTGCGCTGCTTGCAACTGAAAGCAATTTTATTGGGGATGCCAAGGAGTTATTTCTCGAAATGTTGGATAAGGGTATCAAGCCTTTTTGGAGAACTTATATGGCTGTGTTCAATGGTATTGCCCGTATGGAGTCCTTGGAGAAGGGGAAGGAGTTGCTTAAGCAGATACAGCCTAAGGGGATCTTGCCTGGGGTGGACGAAGGCCGTTTCACAGAGGTAATGAAGGCAATGAAATTGTATGCTGATCTCGAGAAGAGGACCACTGACAAAGATGTTCAAGAACTTATCCGCGATATCTACCTTAATGGCTTGATGGCATGGAGAAAGAGTGATGGGGCATGTTCTCTGCTATGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

369

Amino Acids

41.03

Weight (kDa)

5.07

Isoelectric Point (pI)

28.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 71 - 113 1.7e-06 PPR repeat family
PPR_2 PF13041 245 - 292 9.1e-06 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 209
AccII CGCG 1 cut(s) 1041
AciI CCGC 2 cut(s) 17, 1039
AclWI GGATC 1 cut(s) 938
AcoI YGGCCR 2 cut(s) 60, 460
AfaI GTAC 3 cut(s) 73, 221, 389
AfiI CCNNNNNNNGG 1 cut(s) 560
AflII CTTAAG 2 cut(s) 350, 908
AflIII ACRYGT 1 cut(s) 309
AgsI TTSAA 6 cut(s) 271, 586, 593, 724, 862, 1028
AjnI CCWGG 3 cut(s) 57, 188, 937
AjuI GAANNNNNNNTTGG 2 cut(s) 131, 163
AluBI AGCT 1 cut(s) 622
AluI AGCT 1 cut(s) 622
Alw21I GWGCWC 2 cut(s) 546, 553
Alw26I GTCTC 2 cut(s) 425, 635
AlwI GGATC 1 cut(s) 938
Ama87I CYCGRG 1 cut(s) 998
AoxI GGCC 6 cut(s) 60, 159, 460, 477, 726, 952
ApeKI GCWGC 7 cut(s) 14, 93, 206, 338, 341, 418, 757
AspLEI GCGC 3 cut(s) 498, 698, 757
AspS9I GGNCC 5 cut(s) 159, 246, 579, 727, 1008
AsuHPI GGTGA 2 cut(s) 479, 664
AvaI CYCGRG 1 cut(s) 998
AvaII GGWCC 3 cut(s) 246, 579, 1008
AxyI CCTNAGG 1 cut(s) 924
BanII GRGCYC 1 cut(s) 603
Bbv12I GWGCWC 2 cut(s) 546, 553
BbvCI CCTCAGC 1 cut(s) 486
BbvI GCAGC 6 cut(s) 105, 193, 325, 328, 430, 744
BccI CCATC 5 cut(s) 100, 446, 566, 1057, 1076
BceAI ACGGC 3 cut(s) 145, 447, 939
BcgI CGANNNNNNTGC 2 cut(s) 28, 62
BciT130I CCWGG 3 cut(s) 59, 190, 939
BclI TGATCA 1 cut(s) 87
BcoDI GTCTC 2 cut(s) 425, 635
BfaI CTAG 1 cut(s) 1105
BfmI CTRYAG 1 cut(s) 342
BfoI RGCGCY 1 cut(s) 699
BfrI CTTAAG 2 cut(s) 350, 908
BisI GCNGC 7 cut(s) 15, 94, 207, 339, 342, 419, 758
BlsI GCNGC 7 cut(s) 16, 95, 208, 340, 343, 420, 759
BmcAI AGTACT 2 cut(s) 221, 389
Bme1390I CCNGG 3 cut(s) 59, 190, 939
Bme18I GGWCC 3 cut(s) 246, 579, 1008
BmeT110I CYCGRG 1 cut(s) 998
BmgT120I GGNCC 5 cut(s) 159, 246, 579, 727, 1008
BmiI GGNNCC 3 cut(s) 160, 297, 729
BmrFI CCNGG 3 cut(s) 59, 190, 939
BmsI GCATC 3 cut(s) 57, 244, 778
BpmI CTGGAG 1 cut(s) 537
Bpu10I CCTNAGC 1 cut(s) 486
BsaAI YACGTR 1 cut(s) 312
BsaJI CCNNGG 9 cut(s) 75, 188, 189, 249, 463, 480, 792, 885, 938
BsaXI ACNNNNNCTCC 4 cut(s) 104, 134, 1063, 1093
Bsc4I CCNNNNNNNGG 1 cut(s) 560
Bse21I CCTNAGG 1 cut(s) 924
Bse3DI GCAATG 2 cut(s) 750, 984
BseBI CCWGG 3 cut(s) 59, 190, 939
BseDI CCNNGG 9 cut(s) 75, 188, 189, 249, 463, 480, 792, 885, 938
BseGI GGATG 5 cut(s) 25, 259, 457, 681, 793
BseLI CCNNNNNNNGG 1 cut(s) 560
BseMI GCAATG 2 cut(s) 750, 984
BseMII CTCAG 2 cut(s) 274, 477
BseRI GAGGAG 4 cut(s) 92, 443, 503, 506
BseXI GCAGC 6 cut(s) 105, 193, 325, 328, 430, 744
Bsh1236I CGCG 1 cut(s) 1041
BshFI GGCC 6 cut(s) 62, 161, 462, 479, 728, 954
BsiHKAI GWGCWC 2 cut(s) 546, 553
BsiHKCI CYCGRG 1 cut(s) 998
BslFI GGGAC 2 cut(s) 140, 254
BslI CCNNNNNNNGG 1 cut(s) 560
BsmAI GTCTC 2 cut(s) 425, 635
BsmFI GGGAC 2 cut(s) 140, 254
BsmI GAATGC 1 cut(s) 420
BsnI GGCC 6 cut(s) 62, 161, 462, 479, 728, 954
BsoBI CYCGRG 1 cut(s) 998
Bsp1286I GDGCHC 3 cut(s) 546, 553, 603
Bsp143I GATC 3 cut(s) 87, 930, 994
BspACI CCGC 2 cut(s) 17, 1039
BspANI GGCC 6 cut(s) 62, 161, 462, 479, 728, 954
BspCNI CTCAG 2 cut(s) 273, 478
BspFNI CGCG 1 cut(s) 1041
BspHI TCATGA 1 cut(s) 135
BspLI GGNNCC 3 cut(s) 160, 297, 729
BspMAI CTGCAG 1 cut(s) 346
BspPI GGATC 1 cut(s) 938
BspTI CTTAAG 2 cut(s) 350, 908
BsrDI GCAATG 2 cut(s) 750, 984
BssECI CCNNGG 9 cut(s) 75, 188, 189, 249, 463, 480, 792, 885, 938
BssMI GATC 3 cut(s) 87, 930, 994
BssT1I CCWWGG 3 cut(s) 249, 792, 885
Bst2UI CCWGG 3 cut(s) 59, 190, 939
Bst6I CTCTTC 1 cut(s) 998
BstAFI CTTAAG 2 cut(s) 350, 908
BstBAI YACGTR 1 cut(s) 312
BstC8I GCNNGC 2 cut(s) 700, 762
BstDEI CTNAG 4 cut(s) 260, 391, 486, 924
BstDSI CCRYGG 1 cut(s) 463
BstF5I GGATG 5 cut(s) 25, 259, 457, 681, 793
BstFNI CGCG 1 cut(s) 1041
BstH2I RGCGCY 1 cut(s) 699
BstHHI GCGC 3 cut(s) 498, 698, 757
BstKTI GATC 3 cut(s) 90, 933, 997
BstMAI GTCTC 2 cut(s) 425, 635
BstMBI GATC 3 cut(s) 87, 930, 994
BstMWI GCNNNNNNNGC 6 cut(s) 11, 338, 628, 725, 761, 919
BstNI CCWGG 3 cut(s) 59, 190, 939
BstNSI RCATGY 2 cut(s) 719, 1092
BstSCI CCNGG 3 cut(s) 57, 188, 937
BstSFI CTRYAG 1 cut(s) 342
BstUI CGCG 1 cut(s) 1041
BstV1I GCAGC 6 cut(s) 105, 193, 325, 328, 430, 744
BstX2I RGATCY 1 cut(s) 930
BstXI CCANNNNNNTGG 2 cut(s) 109, 692
BstYI RGATCY 1 cut(s) 930
Bsu36I CCTNAGG 1 cut(s) 924
BsuRI GGCC 6 cut(s) 62, 161, 462, 479, 728, 954
BtgI CCRYGG 1 cut(s) 463
BtsCI GGATG 5 cut(s) 25, 259, 457, 681, 793
BtsIMutI CAGTG 1 cut(s) 1011
Cac8I GCNNGC 2 cut(s) 700, 762
CciI TCATGA 1 cut(s) 135
CfoI GCGC 3 cut(s) 498, 698, 757
Cfr13I GGNCC 5 cut(s) 159, 246, 579, 727, 1008
CseI GACGC 1 cut(s) 212
Csp6I GTAC 3 cut(s) 72, 220, 388
CviAII CATG 5 cut(s) 136, 716, 732, 1068, 1089
CviQI GTAC 3 cut(s) 72, 220, 388
DdeI CTNAG 4 cut(s) 260, 391, 486, 924
DpnI GATC 3 cut(s) 89, 932, 996
DpnII GATC 3 cut(s) 87, 930, 994
DrdI GACNNNNNNGTC 1 cut(s) 209
DseDI GACNNNNNNGTC 1 cut(s) 209
EaeI YGGCCR 2 cut(s) 60, 460
Eam1104I CTCTTC 1 cut(s) 998
EarI CTCTTC 1 cut(s) 998
Eco130I CCWWGG 3 cut(s) 249, 792, 885
Eco24I GRGCYC 1 cut(s) 603
Eco32I GATATC 1 cut(s) 1045
Eco47I GGWCC 3 cut(s) 246, 579, 1008
Eco81I CCTNAGG 1 cut(s) 924
Eco88I CYCGRG 1 cut(s) 998
EcoO109I RGGNCCY 1 cut(s) 727
EcoRII CCWGG 3 cut(s) 57, 188, 937
EcoRV GATATC 1 cut(s) 1045
EcoT14I CCWWGG 3 cut(s) 249, 792, 885
EcoT38I GRGCYC 1 cut(s) 603
ErhI CCWWGG 3 cut(s) 249, 792, 885
FaeI CATG 5 cut(s) 139, 719, 735, 1071, 1092
FalI AAGNNNNNCTT 4 cut(s) 374, 406, 917, 949
FaqI GGGAC 2 cut(s) 140, 254
FatI CATG 5 cut(s) 135, 715, 731, 1067, 1088
FbaI TGATCA 1 cut(s) 87
Fnu4HI GCNGC 7 cut(s) 15, 94, 207, 339, 342, 419, 758
FokI GGATG 5 cut(s) 32, 266, 464, 668, 800
FriOI GRGCYC 1 cut(s) 603
Fsp4HI GCNGC 7 cut(s) 15, 94, 207, 339, 342, 419, 758
FspBI CTAG 1 cut(s) 1105
GlaI GCGC 3 cut(s) 497, 697, 756
GluI GCNGC 7 cut(s) 15, 94, 207, 339, 342, 419, 758
GsuI CTGGAG 1 cut(s) 537
HaeII RGCGCY 1 cut(s) 699
HaeIII GGCC 6 cut(s) 62, 161, 462, 479, 728, 954
HgaI GACGC 1 cut(s) 212
HhaI GCGC 3 cut(s) 498, 698, 757
Hin1II CATG 5 cut(s) 139, 719, 735, 1071, 1092
Hin6I GCGC 3 cut(s) 496, 696, 755
HinP1I GCGC 3 cut(s) 496, 696, 755
HinfI GANTC 2 cut(s) 8, 881
HphI GGTGA 2 cut(s) 479, 664
Hpy166II GTNNAC 1 cut(s) 946
Hpy188I TCNGA 3 cut(s) 39, 87, 263
Hpy188III TCNNGA 7 cut(s) 136, 554, 590, 806, 998, 1000, 1028
Hpy8I GTNNAC 1 cut(s) 946
Hpy99I CGWCG 1 cut(s) 206
HpyAV CCTTC 8 cut(s) 34, 551, 592, 718, 886, 892, 944, 967
HpyCH4IV ACGT 2 cut(s) 141, 311
HpyCH4V TGCA 4 cut(s) 344, 418, 735, 764
HpyF10VI GCNNNNNNNGC 6 cut(s) 11, 338, 628, 725, 761, 919
HpyF3I CTNAG 4 cut(s) 260, 391, 486, 924
HpySE526I ACGT 2 cut(s) 141, 311
Hsp92II CATG 5 cut(s) 139, 719, 735, 1071, 1092
HspAI GCGC 3 cut(s) 496, 696, 755
Ksp22I TGATCA 1 cut(s) 87
Kzo9I GATC 3 cut(s) 87, 930, 994
LmnI GCTCC 3 cut(s) 493, 549, 556
Lsp1109I GCAGC 6 cut(s) 105, 193, 325, 328, 430, 744
LweI GCATC 3 cut(s) 57, 244, 778
MaeI CTAG 1 cut(s) 1105
MaeII ACGT 2 cut(s) 141, 311
MalI GATC 3 cut(s) 89, 932, 996
MboI GATC 3 cut(s) 87, 930, 994
MboII GAAGA 4 cut(s) 367, 394, 661, 1015
MflI RGATCY 1 cut(s) 930
MhlI GDGCHC 3 cut(s) 546, 553, 603
MluCI AATT 3 cut(s) 742, 775, 983
MlyI GAGTC 1 cut(s) 890
MmeI TCCRAC 3 cut(s) 384, 429, 795
MseI TTAA 5 cut(s) 122, 351, 627, 909, 1053
MslI CAYNNNNRTG 2 cut(s) 140, 690
MspCI CTTAAG 2 cut(s) 350, 908
MspR9I CCNGG 3 cut(s) 59, 190, 939
Mva1269I GAATGC 1 cut(s) 420
MvaI CCWGG 3 cut(s) 59, 190, 939
MvnI CGCG 1 cut(s) 1041
MwoI GCNNNNNNNGC 6 cut(s) 11, 338, 628, 725, 761, 919
NdeII GATC 3 cut(s) 87, 930, 994
NlaIII CATG 5 cut(s) 139, 719, 735, 1071, 1092
NlaIV GGNNCC 3 cut(s) 160, 297, 729
NmeAIII GCCGAG 2 cut(s) 88, 505
NspI RCATGY 2 cut(s) 719, 1092
PaeR7I CTCGAG 1 cut(s) 998
PagI TCATGA 1 cut(s) 135
PasI CCCWGGG 1 cut(s) 189
PctI GAATGC 1 cut(s) 420
PfeI GAWTC 1 cut(s) 8
PkrI GCNGC 7 cut(s) 16, 95, 208, 340, 343, 420, 759
PleI GAGTC 1 cut(s) 889
PpsI GAGTC 1 cut(s) 889
Ppu21I YACGTR 1 cut(s) 312
Psp6I CCWGG 3 cut(s) 57, 188, 937
PspGI CCWGG 3 cut(s) 57, 188, 937
PspN4I GGNNCC 3 cut(s) 160, 297, 729
PspPI GGNCC 5 cut(s) 159, 246, 579, 727, 1008
PstI CTGCAG 1 cut(s) 346
PsuI RGATCY 1 cut(s) 930
RsaI GTAC 3 cut(s) 73, 221, 389
RsaNI GTAC 3 cut(s) 72, 220, 388
RseI CAYNNNNRTG 2 cut(s) 140, 690
SaqAI TTAA 5 cut(s) 122, 351, 627, 909, 1053
SatI GCNGC 7 cut(s) 15, 94, 207, 339, 342, 419, 758
Sau3AI GATC 3 cut(s) 87, 930, 994
Sau96I GGNCC 5 cut(s) 159, 246, 579, 727, 1008
ScaI AGTACT 2 cut(s) 221, 389
SchI GAGTC 1 cut(s) 890
ScrFI CCNGG 3 cut(s) 59, 190, 939
SduI GDGCHC 3 cut(s) 546, 553, 603
SetI ASST 7 cut(s) 144, 314, 351, 584, 624, 969, 1053
SfaNI GCATC 3 cut(s) 57, 244, 778
SfcI CTRYAG 1 cut(s) 342
Sfr274I CTCGAG 1 cut(s) 998
SinI GGWCC 3 cut(s) 246, 579, 1008
SlaI CTCGAG 1 cut(s) 998
SmiMI CAYNNNNRTG 2 cut(s) 140, 690
SmlI CTYRAG 3 cut(s) 350, 908, 998
SmoI CTYRAG 3 cut(s) 350, 908, 998
Sse9I AATT 3 cut(s) 742, 775, 983
SsiI CCGC 2 cut(s) 17, 1039
SspMI CTAG 1 cut(s) 1105
StyD4I CCNGG 3 cut(s) 57, 188, 937
StyI CCWWGG 3 cut(s) 249, 792, 885
TaiI ACGT 2 cut(s) 144, 314
TaqI TCGA 4 cut(s) 201, 216, 807, 999
TasI AATT 3 cut(s) 742, 775, 983
TatI WGTACW 2 cut(s) 219, 387
TfiI GAWTC 1 cut(s) 8
Tru1I TTAA 5 cut(s) 122, 351, 627, 909, 1053
Tru9I TTAA 5 cut(s) 122, 351, 627, 909, 1053
TscAI CASTG 1 cut(s) 1018
TseI GCWGC 7 cut(s) 14, 93, 206, 338, 341, 418, 757
TspDTI ATGAA 6 cut(s) 124, 152, 195, 533, 986, 995
TspGWI ACGGA 1 cut(s) 536
TspRI CASTG 1 cut(s) 1018
Vha464I CTTAAG 2 cut(s) 350, 908
VpaK11BI GGWCC 3 cut(s) 246, 579, 1008
XceI RCATGY 2 cut(s) 719, 1092
XhoI CTCGAG 1 cut(s) 998
XspI CTAG 1 cut(s) 1105
ZrmI AGTACT 2 cut(s) 221, 389
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.