Pentatricopeptide repeat-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 208 |
| AcuI | CTGAAG | 1 cut(s) | 349 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 252 |
| AgsI | TTSAA | 1 cut(s) | 164 |
| AluBI | AGCT | 4 cut(s) | 62, 89, 272, 396 |
| AluI | AGCT | 4 cut(s) | 62, 89, 272, 396 |
| Alw21I | GWGCWC | 2 cut(s) | 64, 182 |
| Ama87I | CYCGRG | 1 cut(s) | 65 |
| AoxI | GGCC | 4 cut(s) | 30, 69, 209, 243 |
| ApeKI | GCWGC | 1 cut(s) | 89 |
| AspS9I | GGNCC | 1 cut(s) | 210 |
| AsuHPI | GGTGA | 2 cut(s) | 247, 313 |
| AvaI | CYCGRG | 1 cut(s) | 65 |
| BanII | GRGCYC | 1 cut(s) | 64 |
| Bbv12I | GWGCWC | 2 cut(s) | 64, 182 |
| BbvCI | CCTCAGC | 1 cut(s) | 273 |
| BbvI | GCAGC | 1 cut(s) | 76 |
| BccI | CCATC | 1 cut(s) | 187 |
| BfaI | CTAG | 1 cut(s) | 397 |
| BisI | GCNGC | 2 cut(s) | 90, 209 |
| BlsI | GCNGC | 2 cut(s) | 91, 210 |
| BmeT110I | CYCGRG | 1 cut(s) | 65 |
| BmgT120I | GGNCC | 1 cut(s) | 210 |
| BmsI | GCATC | 1 cut(s) | 157 |
| Bpu10I | CCTNAGC | 1 cut(s) | 273 |
| BpuEI | CTTGAG | 1 cut(s) | 206 |
| BsaJI | CCNNGG | 1 cut(s) | 54 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 252 |
| Bse3DI | GCAATG | 1 cut(s) | 345 |
| BseDI | CCNNGG | 1 cut(s) | 54 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 252 |
| BseMI | GCAATG | 1 cut(s) | 345 |
| BseMII | CTCAG | 1 cut(s) | 264 |
| BseRI | GAGGAG | 2 cut(s) | 290, 293 |
| BseXI | GCAGC | 1 cut(s) | 76 |
| BseYI | CCCAGC | 1 cut(s) | 92 |
| BshFI | GGCC | 4 cut(s) | 32, 71, 211, 245 |
| BsiHKAI | GWGCWC | 2 cut(s) | 64, 182 |
| BsiHKCI | CYCGRG | 1 cut(s) | 65 |
| BslFI | GGGAC | 1 cut(s) | 150 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 252 |
| BsmFI | GGGAC | 1 cut(s) | 150 |
| BsnI | GGCC | 4 cut(s) | 32, 71, 211, 245 |
| BsoBI | CYCGRG | 1 cut(s) | 65 |
| Bsp1286I | GDGCHC | 2 cut(s) | 64, 182 |
| BspACI | CCGC | 1 cut(s) | 208 |
| BspANI | GGCC | 4 cut(s) | 32, 71, 211, 245 |
| BspCNI | CTCAG | 1 cut(s) | 265 |
| BsrDI | GCAATG | 1 cut(s) | 345 |
| BssECI | CCNNGG | 1 cut(s) | 54 |
| BssT1I | CCWWGG | 1 cut(s) | 54 |
| Bst4CI | ACNGT | 3 cut(s) | 77, 124, 232 |
| BstC8I | GCNNGC | 1 cut(s) | 358 |
| BstDEI | CTNAG | 1 cut(s) | 273 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 250 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 68, 98 |
| BstNSI | RCATGY | 1 cut(s) | 85 |
| BstV1I | GCAGC | 1 cut(s) | 76 |
| BsuRI | GGCC | 4 cut(s) | 32, 71, 211, 245 |
| BtsIMutI | CAGTG | 1 cut(s) | 120 |
| Cac8I | GCNNGC | 1 cut(s) | 358 |
| Cfr13I | GGNCC | 1 cut(s) | 210 |
| CviAII | CATG | 1 cut(s) | 82 |
| CviJI | RGCY | 8 cut(s) | 32, 62, 71, 89, 211, 245, 272, 396 |
| CviKI_1 | RGCY | 8 cut(s) | 32, 62, 71, 89, 211, 245, 272, 396 |
| DdeI | CTNAG | 1 cut(s) | 273 |
| Ecl136II | GAGCTC | 1 cut(s) | 62 |
| Eco130I | CCWWGG | 1 cut(s) | 54 |
| Eco147I | AGGCCT | 3 cut(s) | 32, 71, 245 |
| Eco24I | GRGCYC | 1 cut(s) | 64 |
| Eco53kI | GAGCTC | 1 cut(s) | 62 |
| Eco57I | CTGAAG | 1 cut(s) | 349 |
| Eco88I | CYCGRG | 1 cut(s) | 65 |
| EcoICRI | GAGCTC | 1 cut(s) | 62 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 250 |
| EcoT14I | CCWWGG | 1 cut(s) | 54 |
| EcoT38I | GRGCYC | 1 cut(s) | 64 |
| ErhI | CCWWGG | 1 cut(s) | 54 |
| FaeI | CATG | 1 cut(s) | 85 |
| FaiI | YATR | 5 cut(s) | 13, 83, 228, 386, 388 |
| FaqI | GGGAC | 1 cut(s) | 150 |
| FatI | CATG | 1 cut(s) | 81 |
| Fnu4HI | GCNGC | 2 cut(s) | 90, 209 |
| FriOI | GRGCYC | 1 cut(s) | 64 |
| Fsp4HI | GCNGC | 2 cut(s) | 90, 209 |
| FspBI | CTAG | 1 cut(s) | 397 |
| GluI | GCNGC | 2 cut(s) | 90, 209 |
| GsaI | CCCAGC | 1 cut(s) | 96 |
| HaeIII | GGCC | 4 cut(s) | 32, 71, 211, 245 |
| Hin1II | CATG | 1 cut(s) | 85 |
| HinfI | GANTC | 1 cut(s) | 138 |
| HphI | GGTGA | 2 cut(s) | 247, 313 |
| Hpy188III | TCNNGA | 2 cut(s) | 65, 367 |
| HpyAV | CCTTC | 1 cut(s) | 193 |
| HpyCH4III | ACNGT | 3 cut(s) | 77, 124, 232 |
| HpyCH4V | TGCA | 3 cut(s) | 8, 251, 332 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 68, 98 |
| HpyF3I | CTNAG | 1 cut(s) | 273 |
| Hsp92II | CATG | 1 cut(s) | 85 |
| LmnI | GCTCC | 1 cut(s) | 59 |
| LpnPI | CCDG | 5 cut(s) | 30, 78, 242, 352, 370 |
| Lsp1109I | GCAGC | 1 cut(s) | 76 |
| LweI | GCATC | 1 cut(s) | 157 |
| MaeI | CTAG | 1 cut(s) | 397 |
| MaeIII | GTNAC | 1 cut(s) | 350 |
| MboII | GAAGA | 1 cut(s) | 176 |
| MhlI | GDGCHC | 2 cut(s) | 64, 182 |
| MlyI | GAGTC | 1 cut(s) | 132 |
| MseI | TTAA | 2 cut(s) | 27, 128 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 68, 98 |
| NlaIII | CATG | 1 cut(s) | 85 |
| NspI | RCATGY | 1 cut(s) | 85 |
| PaeR7I | CTCGAG | 1 cut(s) | 65 |
| PceI | AGGCCT | 3 cut(s) | 32, 71, 245 |
| PkrI | GCNGC | 2 cut(s) | 91, 210 |
| PleI | GAGTC | 1 cut(s) | 132 |
| PpsI | GAGTC | 1 cut(s) | 132 |
| Psp124BI | GAGCTC | 1 cut(s) | 64 |
| PspFI | CCCAGC | 1 cut(s) | 92 |
| PspPI | GGNCC | 1 cut(s) | 210 |
| SacI | GAGCTC | 1 cut(s) | 64 |
| SaqAI | TTAA | 2 cut(s) | 27, 128 |
| SatI | GCNGC | 2 cut(s) | 90, 209 |
| Sau96I | GGNCC | 1 cut(s) | 210 |
| SchI | GAGTC | 1 cut(s) | 132 |
| SduI | GDGCHC | 2 cut(s) | 64, 182 |
| SetI | ASST | 8 cut(s) | 20, 39, 64, 91, 270, 274, 380, 398 |
| SfaNI | GCATC | 1 cut(s) | 157 |
| Sfr274I | CTCGAG | 1 cut(s) | 65 |
| SlaI | CTCGAG | 1 cut(s) | 65 |
| SmlI | CTYRAG | 2 cut(s) | 65, 185 |
| SmoI | CTYRAG | 2 cut(s) | 65, 185 |
| SseBI | AGGCCT | 3 cut(s) | 32, 71, 245 |
| SsiI | CCGC | 1 cut(s) | 208 |
| SspMI | CTAG | 1 cut(s) | 397 |
| SstI | GAGCTC | 1 cut(s) | 64 |
| StuI | AGGCCT | 3 cut(s) | 32, 71, 245 |
| StyI | CCWWGG | 1 cut(s) | 54 |
| TaaI | ACNGT | 3 cut(s) | 77, 124, 232 |
| TaqI | TCGA | 1 cut(s) | 66 |
| TauI | GCSGC | 1 cut(s) | 211 |
| Tru1I | TTAA | 2 cut(s) | 27, 128 |
| Tru9I | TTAA | 2 cut(s) | 27, 128 |
| TscAI | CASTG | 1 cut(s) | 127 |
| TseI | GCWGC | 1 cut(s) | 89 |
| TspRI | CASTG | 1 cut(s) | 127 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 250 |
| XceI | RCATGY | 1 cut(s) | 85 |
| XhoI | CTCGAG | 1 cut(s) | 65 |
| XspI | CTAG | 1 cut(s) | 397 |