RLG00000001932

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000101
Physical Location & Seq
Forward (+)
23191207 .. 23192385
1179 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001932

Sequence Viewer

Length: 1113 bp
ATGAAGGTTTATGAGGATGTGACCAAAGACTGTGAGGATAAGGAATTGAGAAAAATATTTGATTGGATTGTGGACTACGATGCCCTTAATGCAAATGCGATTCATATGTTCAGTTCTCTGGCAGATTGCGGCTTCCGTGATAGAGCTAGAGAGCTCTTTAAGCCTCATTCTGAGCAGACCACACTGCCAGAAGTGGCTGTCTTCACCATGGTGATTATGGCCTACGCCGCCAATGGCAAGACCAAGGATGCTAACAAGGTCTACCAGCAGATGATAGCCTCTGGTGTCACCCCCACCGCCTACACGTACACTTTAATCATCTGCGGAATGGCAAAAGACTTTTCAGATTCTAATTTCGTCGGGTATGCCAAGAAGTATTTCCTTGAAATGTTGGATAGGGGGATGAAGCCCCAGTATCAACCCTACATGTATGTTATGGATGCCATTGCCTACCGAGAGCCAGTAGAGGAGGCCAAGAAGTTCCTTGAGCAGATAAAAGCTAAGGGGTTCATCCCTGTCATTGATGATTTTCAATACAAAGAAAACCACCTCACAGAAGCATTGCAGGCAATGAAAACGTATGCTGATCTCATAGAACGGTCGATGGAGGTGCACAAGGCTTTGGTAGAGGATGGAAATGTGGACGAGGCCATCGAGCTCTATCATACCATTCAACAGACAGGCGTAGAGCCATTGGTCCAAATCCACACCTCTGTTATTAAAGCCTACCTTAAGTTTGGCAAGACCATGGGTGCTCTGGAGGCGTATCTGGCCATGTTAGCTGCTGGGGTTGCCTCCAACTCCTACACTTACACTGTTTTAATCAAGGGACTCTGTGCTGACTACAACTTCTTTGGAGATGCCAAGAAGTACTTGCTTGAGATGATGGACAAGGGGAAGCAGCCTAATGTTGCTGCCTATACTGCAGTGATAGAAGGCTTTGTGCTTTGGGAGGACAAGATAGCTGAGGAGAAGGGCAAAGAGTTTGTGGAGATGATGATGGGTAAAGGTTTTGTGCCTAATGGGAAGGCTATGATGAAGGTCTTGAAGGGCAAACCAACACCGGTAATTAGAAGGGTCATGAACATTGTACTTTCCAAGTTGGAGAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

371

Amino Acids

41.94

Weight (kDa)

5.82

Isoelectric Point (pI)

25.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 63 - 112 1.4e-11 PPR repeat family
PPR_3 PF13812 63 - 107 8.7e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 237 - 279 2.5e-09 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 261
AciI CCGC 4 cut(s) 129, 228, 297, 324
AcoI YGGCCR 1 cut(s) 771
AfaI GTAC 3 cut(s) 308, 872, 1092
AflII CTTAAG 1 cut(s) 731
AflIII ACRYGT 2 cut(s) 303, 426
AgeI ACCGGT 1 cut(s) 1063
AgsI TTSAA 4 cut(s) 386, 533, 674, 1048
AjuI GAANNNNNNNTTGG 2 cut(s) 362, 394
AleI CACNNNNGTG 1 cut(s) 209
AluBI AGCT 7 cut(s) 146, 154, 500, 658, 782, 965, 1110
AluI AGCT 7 cut(s) 146, 154, 500, 658, 782, 965, 1110
Alw21I GWGCWC 4 cut(s) 156, 615, 660, 757
Alw44I GTGCAC 1 cut(s) 611
AoxI GGCC 4 cut(s) 219, 471, 648, 771
ApaLI GTGCAC 1 cut(s) 611
ApeKI GCWGC 3 cut(s) 782, 901, 914
AsiGI ACCGGT 1 cut(s) 1063
Asp700I GAANNNNTTC 1 cut(s) 377
AspS9I GGNCC 1 cut(s) 697
AsuHPI GGTGA 3 cut(s) 196, 223, 280
AvaII GGWCC 1 cut(s) 697
BaeGI GKGCMC 1 cut(s) 615
BalI TGGCCA 1 cut(s) 773
BanII GRGCYC 2 cut(s) 156, 660
BbsI GAAGAC 1 cut(s) 193
Bbv12I GWGCWC 4 cut(s) 156, 615, 660, 757
BbvCI CCTCAGC 1 cut(s) 966
BbvI GCAGC 3 cut(s) 769, 901, 913
BccI CCATC 5 cut(s) 598, 626, 659, 880, 994
BcgI CGANNNNNNTGC 2 cut(s) 592, 626
BfaI CTAG 1 cut(s) 147
BfmI CTRYAG 1 cut(s) 924
BfrI CTTAAG 1 cut(s) 731
BisI GCNGC 5 cut(s) 130, 228, 783, 902, 915
BlsI GCNGC 5 cut(s) 131, 229, 784, 903, 916
BmcAI AGTACT 1 cut(s) 872
Bme18I GGWCC 1 cut(s) 697
BmgT120I GGNCC 1 cut(s) 697
BmrI ACTGGG 1 cut(s) 406
BmsI GCATC 4 cut(s) 70, 238, 430, 850
BmuI ACTGGG 1 cut(s) 406
BpiI GAAGAC 1 cut(s) 193
BpmI CTGGAG 1 cut(s) 779
Bpu10I CCTNAGC 2 cut(s) 501, 966
BpuEI CTTGAG 2 cut(s) 506, 899
BsaAI YACGTR 1 cut(s) 306
BsaJI CCNNGG 3 cut(s) 207, 243, 747
BsaWI WCCGGW 1 cut(s) 1063
Bse118I RCCGGY 1 cut(s) 1063
Bse1I ACTGG 2 cut(s) 412, 461
Bse3DI GCAATG 3 cut(s) 444, 560, 576
BseDI CCNNGG 3 cut(s) 207, 243, 747
BseGI GGATG 6 cut(s) 22, 253, 408, 445, 510, 637
BseMI GCAATG 3 cut(s) 444, 560, 576
BseMII CTCAG 2 cut(s) 162, 957
BseNI ACTGG 2 cut(s) 412, 461
BseRI GAGGAG 2 cut(s) 482, 983
BseSI GKGCMC 1 cut(s) 615
BseXI GCAGC 3 cut(s) 769, 901, 913
BseYI CCCAGC 1 cut(s) 785
Bsh1285I CGRYCG 1 cut(s) 602
BshFI GGCC 4 cut(s) 221, 473, 650, 773
BshTI ACCGGT 1 cut(s) 1063
BsiEI CGRYCG 1 cut(s) 602
BsiHKAI GWGCWC 4 cut(s) 156, 615, 660, 757
BsiSI CCGG 1 cut(s) 1064
BslFI GGGAC 1 cut(s) 843
BsmFI GGGAC 1 cut(s) 843
BsnI GGCC 4 cut(s) 221, 473, 650, 773
Bsp1286I GDGCHC 4 cut(s) 156, 615, 660, 757
Bsp143I GATC 1 cut(s) 586
Bsp19I CCATGG 2 cut(s) 207, 747
BspACI CCGC 4 cut(s) 129, 228, 297, 324
BspANI GGCC 4 cut(s) 221, 473, 650, 773
BspCNI CTCAG 2 cut(s) 163, 958
BspHI TCATGA 1 cut(s) 1080
BspMAI CTGCAG 1 cut(s) 928
BspTI CTTAAG 1 cut(s) 731
BsrDI GCAATG 3 cut(s) 444, 560, 576
BsrFI RCCGGY 1 cut(s) 1063
BsrI ACTGG 2 cut(s) 412, 461
BssAI RCCGGY 1 cut(s) 1063
BssECI CCNNGG 3 cut(s) 207, 243, 747
BssMI GATC 1 cut(s) 586
BssT1I CCWWGG 3 cut(s) 207, 243, 747
Bst4CI ACNGT 3 cut(s) 32, 600, 817
BstAFI CTTAAG 1 cut(s) 731
BstBAI YACGTR 1 cut(s) 306
BstC8I GCNNGC 1 cut(s) 567
BstDEI CTNAG 3 cut(s) 171, 501, 966
BstDSI CCRYGG 2 cut(s) 207, 747
BstF5I GGATG 6 cut(s) 22, 253, 408, 445, 510, 637
BstKTI GATC 1 cut(s) 589
BstMBI GATC 1 cut(s) 586
BstMCI CGRYCG 1 cut(s) 602
BstMWI GCNNNNNNNGC 9 cut(s) 89, 160, 227, 566, 761, 770, 779, 791, 923
BstNSI RCATGY 1 cut(s) 430
BstSFI CTRYAG 1 cut(s) 924
BstSLI GKGCMC 1 cut(s) 615
BstV1I GCAGC 3 cut(s) 769, 901, 913
BstV2I GAAGAC 1 cut(s) 193
BsuRI GGCC 4 cut(s) 221, 473, 650, 773
BtgI CCRYGG 2 cut(s) 207, 747
BtsCI GGATG 6 cut(s) 22, 253, 408, 445, 510, 637
BtsI GCAGTG 2 cut(s) 182, 933
BtsIMutI CAGTG 3 cut(s) 182, 813, 933
Cac8I GCNNGC 1 cut(s) 567
CciI TCATGA 1 cut(s) 1080
Cfr10I RCCGGY 1 cut(s) 1063
Cfr13I GGNCC 1 cut(s) 697
Csp6I GTAC 3 cut(s) 307, 871, 1091
CspAI ACCGGT 1 cut(s) 1063
CviAII CATG 5 cut(s) 208, 427, 748, 775, 1081
CviQI GTAC 3 cut(s) 307, 871, 1091
DdeI CTNAG 3 cut(s) 171, 501, 966
DpnI GATC 1 cut(s) 588
DpnII GATC 1 cut(s) 586
EaeI YGGCCR 1 cut(s) 771
Ecl136II GAGCTC 2 cut(s) 154, 658
Eco130I CCWWGG 3 cut(s) 207, 243, 747
Eco24I GRGCYC 2 cut(s) 156, 660
Eco47I GGWCC 1 cut(s) 697
Eco53kI GAGCTC 2 cut(s) 154, 658
EcoICRI GAGCTC 2 cut(s) 154, 658
EcoT14I CCWWGG 3 cut(s) 207, 243, 747
EcoT38I GRGCYC 2 cut(s) 156, 660
ErhI CCWWGG 3 cut(s) 207, 243, 747
FaeI CATG 5 cut(s) 211, 430, 751, 778, 1084
FalI AAGNNNNNCTT 4 cut(s) 714, 746, 857, 889
FaqI GGGAC 1 cut(s) 843
FatI CATG 5 cut(s) 207, 426, 747, 774, 1080
FauNDI CATATG 1 cut(s) 105
FblI GTMKAC 1 cut(s) 261
Fnu4HI GCNGC 5 cut(s) 130, 228, 783, 902, 915
FokI GGATG 6 cut(s) 29, 260, 415, 452, 497, 644
FriOI GRGCYC 2 cut(s) 156, 660
Fsp4HI GCNGC 5 cut(s) 130, 228, 783, 902, 915
FspBI CTAG 1 cut(s) 147
GluI GCNGC 5 cut(s) 130, 228, 783, 902, 915
GsaI CCCAGC 1 cut(s) 789
GsuI CTGGAG 1 cut(s) 779
HaeIII GGCC 4 cut(s) 221, 473, 650, 773
HapII CCGG 1 cut(s) 1064
Hin1II CATG 5 cut(s) 211, 430, 751, 778, 1084
HinfI GANTC 3 cut(s) 100, 347, 831
HpaII CCGG 1 cut(s) 1064
HphI GGTGA 3 cut(s) 196, 223, 280
Hpy166II GTNNAC 5 cut(s) 73, 262, 309, 613, 643
Hpy188I TCNGA 2 cut(s) 172, 346
Hpy188III TCNNGA 3 cut(s) 758, 1045, 1081
Hpy8I GTNNAC 5 cut(s) 73, 262, 309, 613, 643
Hpy99I CGWCG 1 cut(s) 362
HpyAV CCTTC 6 cut(s) 929, 967, 1021, 1033, 1042, 1068
HpyCH4III ACNGT 3 cut(s) 32, 600, 817
HpyCH4IV ACGT 2 cut(s) 305, 578
HpyCH4V TGCA 4 cut(s) 92, 565, 613, 926
HpyF10VI GCNNNNNNNGC 9 cut(s) 89, 160, 227, 566, 761, 770, 779, 791, 923
HpyF3I CTNAG 3 cut(s) 171, 501, 966
HpySE526I ACGT 2 cut(s) 305, 578
Hsp92II CATG 5 cut(s) 211, 430, 751, 778, 1084
Kzo9I GATC 1 cut(s) 586
Lsp1109I GCAGC 3 cut(s) 769, 901, 913
LweI GCATC 4 cut(s) 70, 238, 430, 850
MaeI CTAG 1 cut(s) 147
MaeII ACGT 2 cut(s) 305, 578
MaeIII GTNAC 2 cut(s) 19, 286
MalI GATC 1 cut(s) 588
MboI GATC 1 cut(s) 586
MboII GAAGA 1 cut(s) 193
MhlI GDGCHC 4 cut(s) 156, 615, 660, 757
MlsI TGGCCA 1 cut(s) 773
MluCI AATT 3 cut(s) 44, 352, 1068
MluNI TGGCCA 1 cut(s) 773
MlyI GAGTC 1 cut(s) 825
MmeI TCCRAC 3 cut(s) 372, 822, 1083
Mox20I TGGCCA 1 cut(s) 773
MroXI GAANNNNTTC 1 cut(s) 377
MscI TGGCCA 1 cut(s) 773
MseI TTAA 6 cut(s) 87, 159, 314, 720, 732, 821
MslI CAYNNNNRTG 1 cut(s) 209
Msp20I TGGCCA 1 cut(s) 773
MspCI CTTAAG 1 cut(s) 731
MspI CCGG 1 cut(s) 1064
MwoI GCNNNNNNNGC 9 cut(s) 89, 160, 227, 566, 761, 770, 779, 791, 923
NcoI CCATGG 2 cut(s) 207, 747
NdeI CATATG 1 cut(s) 105
NdeII GATC 1 cut(s) 586
NlaIII CATG 5 cut(s) 211, 430, 751, 778, 1084
NmuCI GTSAC 2 cut(s) 19, 286
NspI RCATGY 1 cut(s) 430
OliI CACNNNNGTG 1 cut(s) 209
PagI TCATGA 1 cut(s) 1080
PciI ACATGT 1 cut(s) 426
PcsI WCGNNNNNNNCGW 1 cut(s) 651
PdmI GAANNNNTTC 1 cut(s) 377
PfeI GAWTC 2 cut(s) 100, 347
PinAI ACCGGT 1 cut(s) 1063
PkrI GCNGC 5 cut(s) 131, 229, 784, 903, 916
PleI GAGTC 1 cut(s) 825
PpsI GAGTC 1 cut(s) 825
Ppu21I YACGTR 1 cut(s) 306
PscI ACATGT 1 cut(s) 426
Psp124BI GAGCTC 2 cut(s) 156, 660
PspFI CCCAGC 1 cut(s) 785
PspPI GGNCC 1 cut(s) 697
PstI CTGCAG 1 cut(s) 928
RsaI GTAC 3 cut(s) 308, 872, 1092
RsaNI GTAC 3 cut(s) 307, 871, 1091
RseI CAYNNNNRTG 1 cut(s) 209
SacI GAGCTC 2 cut(s) 156, 660
SaqAI TTAA 6 cut(s) 87, 159, 314, 720, 732, 821
SatI GCNGC 5 cut(s) 130, 228, 783, 902, 915
Sau3AI GATC 1 cut(s) 586
Sau96I GGNCC 1 cut(s) 697
ScaI AGTACT 1 cut(s) 872
SchI GAGTC 1 cut(s) 825
SduI GDGCHC 4 cut(s) 156, 615, 660, 757
SfaNI GCATC 4 cut(s) 70, 238, 430, 850
SfcI CTRYAG 1 cut(s) 924
SinI GGWCC 1 cut(s) 697
SmiMI CAYNNNNRTG 1 cut(s) 209
SmlI CTYRAG 3 cut(s) 485, 731, 878
SmoI CTYRAG 3 cut(s) 485, 731, 878
Sse9I AATT 3 cut(s) 44, 352, 1068
SsiI CCGC 4 cut(s) 129, 228, 297, 324
SspI AATATT 1 cut(s) 57
SspMI CTAG 1 cut(s) 147
SstI GAGCTC 2 cut(s) 156, 660
StyI CCWWGG 3 cut(s) 207, 243, 747
TaaI ACNGT 3 cut(s) 32, 600, 817
TaiI ACGT 2 cut(s) 308, 581
TaqI TCGA 2 cut(s) 602, 654
TasI AATT 3 cut(s) 44, 352, 1068
TatI WGTACW 2 cut(s) 870, 1090
TauI GCSGC 2 cut(s) 132, 230
TfiI GAWTC 2 cut(s) 100, 347
Tru1I TTAA 6 cut(s) 87, 159, 314, 720, 732, 821
Tru9I TTAA 6 cut(s) 87, 159, 314, 720, 732, 821
TscAI CASTG 3 cut(s) 189, 820, 933
TseFI GTSAC 2 cut(s) 19, 286
TseI GCWGC 3 cut(s) 782, 901, 914
Tsp45I GTSAC 2 cut(s) 19, 286
TspDTI ATGAA 7 cut(s) 17, 92, 419, 499, 587, 1052, 1097
TspGWI ACGGA 1 cut(s) 125
TspRI CASTG 3 cut(s) 189, 820, 933
Vha464I CTTAAG 1 cut(s) 731
VneI GTGCAC 1 cut(s) 611
VpaK11BI GGWCC 1 cut(s) 697
XceI RCATGY 1 cut(s) 430
XcmI CCANNNNNNNNNTGG 2 cut(s) 214, 754
XmiI GTMKAC 1 cut(s) 261
XmnI GAANNNNTTC 1 cut(s) 377
XspI CTAG 1 cut(s) 147
ZrmI AGTACT 1 cut(s) 872
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.