Rorug07G0295200

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000101
Physical Location & Seq
Reverse (-)
28926922 .. 28929989
3068 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0295200.1

Sequence Viewer

Length: 1113 bp
ATGCAAGGACGTGATATGATTGGTCGTGCTAGAACAGGAACTGGGAAAACTCTTGCATTTGGGATTCCCATTTTGGATAAAATCATTCAATTCAATGCCAAACACGGCCGTGGGAGGAATCCTTTGGCTTTGGTGTTGGCTCCGACAAGAGAACTTGCAAAGCAAGTTGACAAGGAATTCTATGAGGCAGCACCGAGTTTGGATACGATTTGTGTGTATGGTGGTACACCCATTGGAAGGCAGATGGGCCAGCTTGACCATGGTGTTGATGTGGCGGTTGGCACACCTGGTCGTGTTATTGATCTCCTTAAGAGGGGTGCTTTGAATCTATCGGAAGTTCAGTTTGTTGTTCTTGATGAAGCTGACCAGATGCTTCAAGTGGGATTTCAGGAGGATGTGCAGATAATCTTGGAGAGATTACCAAAGAAACGTCAGACCTTGATGTTCTCTGCAACAATGCCTACATGGATCAAAAATCTTACTAGGAATTACCTAAAAGATCCAGCTGTTATCGATCTTATGCCAGGCCTAAACCCTCTCATCCTCTTCGCAATGTTGTCGTCATTGTCTCTCCCCAATCCTCCGACCTCGCCGCCTACCTTTGACGCCTTCGTGATGCCATTGAAGAGCTCCAGAACCCGAAACACCATTCTTCGCCCTGGATTGCGAGGCAACTCTTATTATATTGCTATCAACTTCAGTCATCCACTGGCTGAGCAACAGATAAAAGCTGTGGACAGAGTTTTGTCAGAACTAGATGTGTCTTCGATACCAAGGTTGATGGTGTGGAACAAGGTTGATAAGGTGAGCGATCCTGACAGCATCAGAACAGAAGCAGAAAAGAGAGATGATGTTGTTTGCATATCTGCTCTGAGTAGCCAGGGCTTGAATGATTTCTGCAGTGCAATCCAGGAAAAATTGAAGGACTCTATGGTATGGGTGGAAGCCTTGATCCCATTTGAAAAAGGAGAGCTTCTTAGTACCATACATAAGGTTGGAATGGTGGAGAGAACAGTGCTACTCAAAACTCCATTTGAGTTGCCCAGTGTACACGAACAAAACATGAACTTTTGGAACTCATGTGGTTTTATAACTTGCAACAAGTTATTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

370

Amino Acids

41.22

Weight (kDa)

8.2

Isoelectric Point (pI)

30.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEAD PF00270 2 - 159 1.4e-42 DEAD/DEAH box helicase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1091
AciI CCGC 2 cut(s) 275, 593
AclWI GGATC 4 cut(s) 476, 494, 806, 946
AcoI YGGCCR 1 cut(s) 106
AcsI RAATTY 1 cut(s) 176
AcuI CTGAAG 1 cut(s) 682
AcyI GRCGYC 1 cut(s) 606
AfaI GTAC 3 cut(s) 226, 982, 1050
AfiI CCNNNNNNNGG 2 cut(s) 237, 313
AflII CTTAAG 1 cut(s) 308
AgsI TTSAA 8 cut(s) 89, 94, 325, 377, 625, 889, 922, 962
AjiI CACGTC 1 cut(s) 11
AjnI CCWGG 5 cut(s) 286, 523, 658, 879, 909
AleI CACNNNNGTG 1 cut(s) 108
AluBI AGCT 6 cut(s) 253, 362, 506, 630, 731, 973
AluI AGCT 6 cut(s) 253, 362, 506, 630, 731, 973
Alw21I GWGCWC 1 cut(s) 632
Alw26I GTCTC 1 cut(s) 573
AlwI GGATC 4 cut(s) 476, 494, 806, 946
AlwNI CAGNNNCTG 1 cut(s) 41
AoxI GGCC 3 cut(s) 106, 247, 526
ApeKI GCWGC 1 cut(s) 188
ApoI RAATTY 1 cut(s) 176
Asp700I GAANNNNTTC 1 cut(s) 893
AspS9I GGNCC 1 cut(s) 247
AsuHPI GGTGA 1 cut(s) 817
BaeI ACNNNNGTAYC 2 cut(s) 761, 794
BanII GRGCYC 1 cut(s) 632
BbsI GAAGAC 1 cut(s) 756
Bbv12I GWGCWC 1 cut(s) 632
BbvI GCAGC 1 cut(s) 200
BccI CCATC 2 cut(s) 238, 775
BceAI ACGGC 2 cut(s) 93, 121
BcgI CGANNNNNNTGC 2 cut(s) 540, 574
BciT130I CCWGG 5 cut(s) 288, 525, 660, 881, 911
BciVI GTATCC 1 cut(s) 196
BcoDI GTCTC 1 cut(s) 573
BfaI CTAG 3 cut(s) 30, 483, 755
BfmI CTRYAG 1 cut(s) 898
BfrI CTTAAG 1 cut(s) 308
BfuI GTATCC 1 cut(s) 196
BisI GCNGC 2 cut(s) 189, 593
BlpI GCTNAGC 1 cut(s) 714
BlsI GCNGC 2 cut(s) 190, 594
Bme1390I CCNGG 5 cut(s) 288, 525, 660, 881, 911
BmgBI CACGTC 1 cut(s) 11
BmgT120I GGNCC 1 cut(s) 247
BmiI GGNNCC 1 cut(s) 141
BmrFI CCNGG 5 cut(s) 288, 525, 660, 881, 911
BmrI ACTGGG 2 cut(s) 51, 1038
BmsI GCATC 3 cut(s) 360, 606, 831
BmuI ACTGGG 2 cut(s) 51, 1038
BpiI GAAGAC 1 cut(s) 756
BpmI CTGGAG 1 cut(s) 616
Bpu1102I GCTNAGC 1 cut(s) 714
Bsa29I ATCGAT 1 cut(s) 513
BsaHI GRCGYC 1 cut(s) 606
BsaJI CCNNGG 5 cut(s) 109, 259, 658, 773, 880
Bsc4I CCNNNNNNNGG 2 cut(s) 237, 313
Bse1I ACTGG 3 cut(s) 46, 714, 1044
Bse3DI GCAATG 1 cut(s) 558
BseBI CCWGG 5 cut(s) 288, 525, 660, 881, 911
BseCI ATCGAT 1 cut(s) 513
BseDI CCNNGG 5 cut(s) 109, 259, 658, 773, 880
BseGI GGATG 3 cut(s) 400, 540, 703
BseLI CCNNNNNNNGG 2 cut(s) 237, 313
BseMI GCAATG 1 cut(s) 558
BseMII CTCAG 2 cut(s) 705, 863
BseNI ACTGG 3 cut(s) 46, 714, 1044
BseX3I CGGCCG 1 cut(s) 106
BseXI GCAGC 1 cut(s) 200
BsgI GTGCAG 1 cut(s) 419
Bsh1285I CGRYCG 1 cut(s) 109
BshFI GGCC 3 cut(s) 108, 249, 528
BshVI ATCGAT 1 cut(s) 513
BsiEI CGRYCG 1 cut(s) 109
BsiHKAI GWGCWC 1 cut(s) 632
BslI CCNNNNNNNGG 2 cut(s) 237, 313
BsmAI GTCTC 1 cut(s) 573
BsnI GGCC 3 cut(s) 108, 249, 528
Bsp1286I GDGCHC 1 cut(s) 632
Bsp1407I TGTACA 1 cut(s) 1048
Bsp143I GATC 6 cut(s) 301, 468, 499, 514, 811, 951
Bsp1720I GCTNAGC 1 cut(s) 714
Bsp19I CCATGG 1 cut(s) 259
BspACI CCGC 2 cut(s) 275, 593
BspANI GGCC 3 cut(s) 108, 249, 528
BspCNI CTCAG 2 cut(s) 706, 864
BspDI ATCGAT 1 cut(s) 513
BspLI GGNNCC 1 cut(s) 141
BspMAI CTGCAG 1 cut(s) 902
BspPI GGATC 4 cut(s) 476, 494, 806, 946
BspQI GCTCTTC 1 cut(s) 620
BspTI CTTAAG 1 cut(s) 308
BsrDI GCAATG 1 cut(s) 558
BsrGI TGTACA 1 cut(s) 1048
BsrI ACTGG 3 cut(s) 46, 714, 1044
BssECI CCNNGG 5 cut(s) 109, 259, 658, 773, 880
BssMI GATC 6 cut(s) 301, 468, 499, 514, 811, 951
BssNI GRCGYC 1 cut(s) 606
BssT1I CCWWGG 2 cut(s) 259, 773
Bst2UI CCWGG 5 cut(s) 288, 525, 660, 881, 911
Bst4CI ACNGT 1 cut(s) 1015
Bst6I CTCTTC 2 cut(s) 551, 620
BstACI GRCGYC 1 cut(s) 606
BstAFI CTTAAG 1 cut(s) 308
BstAUI TGTACA 1 cut(s) 1048
BstC8I GCNNGC 1 cut(s) 251
BstDEI CTNAG 3 cut(s) 714, 872, 977
BstDSI CCRYGG 2 cut(s) 109, 259
BstF5I GGATG 3 cut(s) 400, 540, 703
BstKTI GATC 6 cut(s) 304, 471, 502, 517, 814, 954
BstMAI GTCTC 1 cut(s) 573
BstMBI GATC 6 cut(s) 301, 468, 499, 514, 811, 951
BstMCI CGRYCG 1 cut(s) 109
BstNI CCWGG 5 cut(s) 288, 525, 660, 881, 911
BstSCI CCNGG 5 cut(s) 286, 523, 658, 879, 909
BstSFI CTRYAG 1 cut(s) 898
BstV1I GCAGC 1 cut(s) 200
BstV2I GAAGAC 1 cut(s) 756
BstX2I RGATCY 1 cut(s) 499
BstYI RGATCY 1 cut(s) 499
BstZI CGGCCG 1 cut(s) 106
Bsu15I ATCGAT 1 cut(s) 513
BsuI GTATCC 1 cut(s) 196
BsuRI GGCC 3 cut(s) 108, 249, 528
BsuTUI ATCGAT 1 cut(s) 513
BtgI CCRYGG 2 cut(s) 109, 259
BtrI CACGTC 1 cut(s) 11
BtsCI GGATG 3 cut(s) 400, 540, 703
BtsI GCAGTG 1 cut(s) 907
BtsIMutI CAGTG 4 cut(s) 707, 907, 1020, 1051
Cac8I GCNNGC 1 cut(s) 251
CaiI CAGNNNCTG 1 cut(s) 41
Cfr13I GGNCC 1 cut(s) 247
ClaI ATCGAT 1 cut(s) 513
CseI GACGC 1 cut(s) 614
CsiI ACCWGGT 1 cut(s) 286
Csp6I GTAC 3 cut(s) 225, 981, 1049
CviAII CATG 4 cut(s) 260, 465, 1063, 1080
CviQI GTAC 3 cut(s) 225, 981, 1049
DdeI CTNAG 3 cut(s) 714, 872, 977
DpnI GATC 6 cut(s) 303, 470, 501, 516, 813, 953
DpnII GATC 6 cut(s) 301, 468, 499, 514, 811, 951
EaeI YGGCCR 1 cut(s) 106
EagI CGGCCG 1 cut(s) 106
Eam1104I CTCTTC 2 cut(s) 551, 620
EarI CTCTTC 2 cut(s) 551, 620
Ecl136II GAGCTC 1 cut(s) 630
EclXI CGGCCG 1 cut(s) 106
Eco130I CCWWGG 2 cut(s) 259, 773
Eco147I AGGCCT 1 cut(s) 528
Eco24I GRGCYC 1 cut(s) 632
Eco52I CGGCCG 1 cut(s) 106
Eco53kI GAGCTC 1 cut(s) 630
Eco57I CTGAAG 1 cut(s) 682
EcoICRI GAGCTC 1 cut(s) 630
EcoRI GAATTC 1 cut(s) 176
EcoRII CCWGG 5 cut(s) 286, 523, 658, 879, 909
EcoT14I CCWWGG 2 cut(s) 259, 773
EcoT38I GRGCYC 1 cut(s) 632
ErhI CCWWGG 2 cut(s) 259, 773
FaeI CATG 4 cut(s) 263, 468, 1066, 1083
FalI AAGNNNNNCTT 2 cut(s) 957, 989
FatI CATG 4 cut(s) 259, 464, 1062, 1079
Fnu4HI GCNGC 2 cut(s) 189, 593
FokI GGATG 3 cut(s) 407, 527, 690
FriOI GRGCYC 1 cut(s) 632
Fsp4HI GCNGC 2 cut(s) 189, 593
FspBI CTAG 3 cut(s) 30, 483, 755
GluI GCNGC 2 cut(s) 189, 593
GsuI CTGGAG 1 cut(s) 616
HaeIII GGCC 3 cut(s) 108, 249, 528
HgaI GACGC 1 cut(s) 614
Hin1I GRCGYC 1 cut(s) 606
Hin1II CATG 4 cut(s) 263, 468, 1066, 1083
HincII GTYRAC 1 cut(s) 169
HindII GTYRAC 1 cut(s) 169
HinfI GANTC 4 cut(s) 64, 118, 325, 926
HphI GGTGA 1 cut(s) 817
Hpy166II GTNNAC 5 cut(s) 169, 227, 736, 1049, 1051
Hpy188I TCNGA 7 cut(s) 144, 334, 435, 585, 751, 827, 873
Hpy188III TCNNGA 5 cut(s) 353, 389, 613, 633, 815
Hpy8I GTNNAC 5 cut(s) 169, 227, 736, 1049, 1051
HpyAV CCTTC 3 cut(s) 231, 619, 916
HpyCH4III ACNGT 1 cut(s) 1015
HpyCH4IV ACGT 2 cut(s) 10, 430
HpyCH4V TGCA 9 cut(s) 4, 56, 158, 400, 452, 861, 900, 905, 1098
HpyF3I CTNAG 3 cut(s) 714, 872, 977
HpySE526I ACGT 2 cut(s) 10, 430
Hsp92I GRCGYC 1 cut(s) 606
Hsp92II CATG 4 cut(s) 263, 468, 1066, 1083
Kzo9I GATC 6 cut(s) 301, 468, 499, 514, 811, 951
LguI GCTCTTC 1 cut(s) 620
LmnI GCTCC 2 cut(s) 145, 635
Lsp1109I GCAGC 1 cut(s) 200
LweI GCATC 3 cut(s) 360, 606, 831
MabI ACCWGGT 1 cut(s) 286
MaeI CTAG 3 cut(s) 30, 483, 755
MaeII ACGT 2 cut(s) 10, 430
MalI GATC 6 cut(s) 303, 470, 501, 516, 813, 953
MboI GATC 6 cut(s) 301, 468, 499, 514, 811, 951
MboII GAAGA 4 cut(s) 538, 637, 644, 756
MflI RGATCY 1 cut(s) 499
MhlI GDGCHC 1 cut(s) 632
MluCI AATT 4 cut(s) 89, 176, 487, 917
MlyI GAGTC 1 cut(s) 920
MmeI TCCRAC 3 cut(s) 167, 608, 976
MnlI CCTC 9 cut(s) 108, 178, 306, 385, 546, 554, 591, 598, 662
MroXI GAANNNNTTC 1 cut(s) 893
MseI TTAA 1 cut(s) 309
MslI CAYNNNNRTG 1 cut(s) 108
MspA1I CMGCKG 1 cut(s) 506
MspCI CTTAAG 1 cut(s) 308
MspR9I CCNGG 5 cut(s) 288, 525, 660, 881, 911
MvaI CCWGG 5 cut(s) 288, 525, 660, 881, 911
NcoI CCATGG 1 cut(s) 259
NdeII GATC 6 cut(s) 301, 468, 499, 514, 811, 951
NlaIII CATG 4 cut(s) 263, 468, 1066, 1083
NlaIV GGNNCC 1 cut(s) 141
OliI CACNNNNGTG 1 cut(s) 108
PceI AGGCCT 1 cut(s) 528
PciSI GCTCTTC 1 cut(s) 620
PdmI GAANNNNTTC 1 cut(s) 893
PfeI GAWTC 3 cut(s) 64, 118, 325
PfoI TCCNGGA 1 cut(s) 909
PkrI GCNGC 2 cut(s) 190, 594
PleI GAGTC 1 cut(s) 920
PpsI GAGTC 1 cut(s) 920
PsiI TTATAA 1 cut(s) 1091
Psp124BI GAGCTC 1 cut(s) 632
Psp6I CCWGG 5 cut(s) 286, 523, 658, 879, 909
PspGI CCWGG 5 cut(s) 286, 523, 658, 879, 909
PspN4I GGNNCC 1 cut(s) 141
PspPI GGNCC 1 cut(s) 247
PstI CTGCAG 1 cut(s) 902
PstNI CAGNNNCTG 1 cut(s) 41
PsuI RGATCY 1 cut(s) 499
PvuII CAGCTG 1 cut(s) 506
RsaI GTAC 3 cut(s) 226, 982, 1050
RsaNI GTAC 3 cut(s) 225, 981, 1049
RseI CAYNNNNRTG 1 cut(s) 108
SacI GAGCTC 1 cut(s) 632
SapI GCTCTTC 1 cut(s) 620
SaqAI TTAA 1 cut(s) 309
SatI GCNGC 2 cut(s) 189, 593
Sau3AI GATC 6 cut(s) 301, 468, 499, 514, 811, 951
Sau96I GGNCC 1 cut(s) 247
SchI GAGTC 1 cut(s) 920
ScrFI CCNGG 5 cut(s) 288, 525, 660, 881, 911
SduI GDGCHC 1 cut(s) 632
SexAI ACCWGGT 1 cut(s) 286
SfaNI GCATC 3 cut(s) 360, 606, 831
SfcI CTRYAG 1 cut(s) 898
SmiMI CAYNNNNRTG 1 cut(s) 108
SmlI CTYRAG 1 cut(s) 308
SmoI CTYRAG 1 cut(s) 308
Sse9I AATT 4 cut(s) 89, 176, 487, 917
SseBI AGGCCT 1 cut(s) 528
SsiI CCGC 2 cut(s) 275, 593
SspMI CTAG 3 cut(s) 30, 483, 755
SstI GAGCTC 1 cut(s) 632
StuI AGGCCT 1 cut(s) 528
StyD4I CCNGG 5 cut(s) 286, 523, 658, 879, 909
StyI CCWWGG 2 cut(s) 259, 773
TaaI ACNGT 1 cut(s) 1015
TaiI ACGT 2 cut(s) 13, 433
TaqI TCGA 2 cut(s) 513, 767
TasI AATT 4 cut(s) 89, 176, 487, 917
TatI WGTACW 1 cut(s) 1048
TauI GCSGC 1 cut(s) 595
TfiI GAWTC 3 cut(s) 64, 118, 325
Tru1I TTAA 1 cut(s) 309
Tru9I TTAA 1 cut(s) 309
TscAI CASTG 4 cut(s) 714, 907, 1020, 1051
TseI GCWGC 1 cut(s) 188
TspDTI ATGAA 2 cut(s) 372, 1079
TspRI CASTG 4 cut(s) 714, 907, 1020, 1051
Vha464I CTTAAG 1 cut(s) 308
XapI RAATTY 1 cut(s) 176
XcmI CCANNNNNNNNNTGG 1 cut(s) 257
XmnI GAANNNNTTC 1 cut(s) 893
XspI CTAG 3 cut(s) 30, 483, 755
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.