RLG00000030014

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000101
Physical Location & Seq
Forward (+)
53351211 .. 53352448
1238 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030014

Sequence Viewer

Length: 1032 bp
ATGGCTAACACTCCAGTGAAGTTGACTAGTAAAGAAGAACTCAGGGAACATGGAATGAAGATTTTTAGAGATATGACCAAAGACTATTCCGGCTTCCTTGATGAAGCGAGAGAGCTCTTCAAGCCACTCGCTGATCAAGCCACGCTGTCGGAAGTGGCAGTCTTCACCATGGTCATTGTGGTCTACGCCTGTGCTGGTAAGACCATGGATGCTTTCAAGAAGTATTTCCTTGAAATGTTGGATAGGGGGATGAAGCCCCGTTCTCAAACATACATGAAAGTTATGAATGCCATTGCCTACCGAGAGCGAGTGAAGAAGGCTAAGGAGTTCCTTGAACAGATAAAAGCCAAGGGGTTCAGCACTTACCACAATGGTTTTCGATACAAAGATGGCTACATCACAGAAGCAATGCAGGTAATCCACATGTGTATTGATCTCGTCCACAGCAATACCATTGACAAGGATGTGCAAAAATTTGTCCAGAAGTCACGCGCTTGCCTTAAGAACCTCATTGAACAGTCAATGAAGATGCACAGTGCTTTGCAAGAGGATGGAAATGTGGGTGAGGCCACGGAGTTCTATGACACAATTGAACAGAAGGGCATAGAGCCCATAGTCCTAATCCACACCTCTGTTATTGAAGCCTACCTCAAGTTTGGCAAGACCAAGGGTGCTCTAGAGGCATTCCTGGCCATGTTAGCTGCTGGGGTTGCTCCCAACTCCTACACTTACATAGTTTTAATCAAGGGACTCGCTGCTGACCGCAACTGCTTTGGAGATGCTAAGAAGTACTTGCTTGAGATGATGGACAAGGGGAAGCGGCCTAATGCAGCTACTTACACTGCGGTGATAGAAGGTTTTGCAAGGCAGGAAGACAGGGCAGCTGAGGATGAGGGCAAAGAGTTTGTGGAGGTGATGATGGGTAAGGGGTTTGTGCCTAATGCAAAGGCAATGAGGGAGGTTTTAAAGGGCAAACCAACACCTGTTATTCGAAGGGTCATGAATATTGTCCTTTCCAAGTTGAAAGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

344

Amino Acids

38.75

Weight (kDa)

9.1

Isoelectric Point (pI)

31.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_24 PF23276 190 - 292 5.1e-08 Fungal tetratrico peptide repeats
PPR_2 PF13041 210 - 252 2.6e-09 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 403
AccI GTMKAC 1 cut(s) 183
AccII CGCG 1 cut(s) 492
AciI CCGC 3 cut(s) 763, 820, 845
AcoI YGGCCR 1 cut(s) 690
AcsI RAATTY 1 cut(s) 473
AfaI GTAC 1 cut(s) 791
AflII CTTAAG 1 cut(s) 500
AflIII ACRYGT 1 cut(s) 423
AgsI TTSAA 8 cut(s) 121, 217, 233, 335, 515, 593, 641, 1024
AhlI ACTAGT 1 cut(s) 26
AjnI CCWGG 1 cut(s) 687
AleI CACNNNNGTG 2 cut(s) 14, 845
AluBI AGCT 4 cut(s) 115, 701, 833, 884
AluI AGCT 4 cut(s) 115, 701, 833, 884
Alw21I GWGCWC 2 cut(s) 117, 676
AoxI GGCC 3 cut(s) 567, 690, 821
ApeKI GCWGC 4 cut(s) 701, 755, 830, 881
ApoI RAATTY 1 cut(s) 473
Asp700I GAANNNNTTC 1 cut(s) 224
AspLEI GCGC 1 cut(s) 494
AsuHPI GGTGA 4 cut(s) 157, 575, 859, 925
AsuII TTCGAA 1 cut(s) 991
BalI TGGCCA 1 cut(s) 692
BanII GRGCYC 2 cut(s) 117, 612
BbsI GAAGAC 2 cut(s) 154, 879
Bbv12I GWGCWC 2 cut(s) 117, 676
BbvCI CCTCAGC 1 cut(s) 885
BbvI GCAGC 4 cut(s) 688, 742, 842, 893
BccI CCATC 4 cut(s) 383, 545, 799, 913
BciT130I CCWGG 1 cut(s) 689
BclI TGATCA 1 cut(s) 133
BcuI ACTAGT 1 cut(s) 26
BfaI CTAG 2 cut(s) 27, 677
BfrI CTTAAG 1 cut(s) 500
BfuAI ACCTGC 1 cut(s) 403
BisI GCNGC 5 cut(s) 702, 756, 821, 831, 882
BlsI GCNGC 5 cut(s) 703, 757, 822, 832, 883
BmcAI AGTACT 1 cut(s) 791
Bme1390I CCNGG 1 cut(s) 689
BmrFI CCNGG 1 cut(s) 689
BmsI GCATC 3 cut(s) 199, 519, 769
BpiI GAAGAC 2 cut(s) 154, 879
Bpu10I CCTNAGC 2 cut(s) 321, 885
Bpu14I TTCGAA 1 cut(s) 991
BpuEI CTTGAG 2 cut(s) 635, 818
BsaJI CCNNGG 5 cut(s) 168, 204, 348, 570, 666
Bse1I ACTGG 1 cut(s) 14
Bse3DI GCAATG 3 cut(s) 291, 414, 957
BseBI CCWGG 1 cut(s) 689
BseDI CCNNGG 5 cut(s) 168, 204, 348, 570, 666
BseGI GGATG 5 cut(s) 214, 255, 469, 556, 895
BseMI GCAATG 3 cut(s) 291, 414, 957
BseMII CTCAG 2 cut(s) 55, 876
BseNI ACTGG 1 cut(s) 14
BseXI GCAGC 4 cut(s) 688, 742, 842, 893
BseYI CCCAGC 1 cut(s) 704
Bsh1236I CGCG 1 cut(s) 492
BshFI GGCC 3 cut(s) 569, 692, 823
BsiHKAI GWGCWC 2 cut(s) 117, 676
BsiSI CCGG 1 cut(s) 90
BslFI GGGAC 1 cut(s) 762
BsmFI GGGAC 1 cut(s) 762
BsmI GAATGC 2 cut(s) 292, 683
BsnI GGCC 3 cut(s) 569, 692, 823
Bsp119I TTCGAA 1 cut(s) 991
Bsp1286I GDGCHC 3 cut(s) 117, 612, 676
Bsp143I GATC 2 cut(s) 133, 433
Bsp19I CCATGG 2 cut(s) 168, 204
BspACI CCGC 3 cut(s) 763, 820, 845
BspANI GGCC 3 cut(s) 569, 692, 823
BspCNI CTCAG 2 cut(s) 54, 877
BspFNI CGCG 1 cut(s) 492
BspHI TCATGA 1 cut(s) 999
BspMI ACCTGC 1 cut(s) 403
BspQI GCTCTTC 1 cut(s) 122
BspT104I TTCGAA 1 cut(s) 991
BspTI CTTAAG 1 cut(s) 500
BsrDI GCAATG 3 cut(s) 291, 414, 957
BsrI ACTGG 1 cut(s) 14
BssECI CCNNGG 5 cut(s) 168, 204, 348, 570, 666
BssMI GATC 2 cut(s) 133, 433
BssT1I CCWWGG 4 cut(s) 168, 204, 348, 666
Bst2UI CCWGG 1 cut(s) 689
Bst4CI ACNGT 2 cut(s) 519, 536
Bst6I CTCTTC 1 cut(s) 122
BstAFI CTTAAG 1 cut(s) 500
BstBI TTCGAA 1 cut(s) 991
BstC8I GCNNGC 1 cut(s) 496
BstDEI CTNAG 4 cut(s) 41, 321, 783, 885
BstDSI CCRYGG 3 cut(s) 168, 204, 570
BstF5I GGATG 5 cut(s) 214, 255, 469, 556, 895
BstFNI CGCG 1 cut(s) 492
BstHHI GCGC 1 cut(s) 494
BstKTI GATC 2 cut(s) 136, 436
BstMBI GATC 2 cut(s) 133, 433
BstMWI GCNNNNNNNGC 6 cut(s) 121, 137, 680, 689, 698, 710
BstNI CCWGG 1 cut(s) 689
BstNSI RCATGY 1 cut(s) 427
BstSCI CCNGG 1 cut(s) 687
BstUI CGCG 1 cut(s) 492
BstV1I GCAGC 4 cut(s) 688, 742, 842, 893
BstV2I GAAGAC 2 cut(s) 154, 879
BsuRI GGCC 3 cut(s) 569, 692, 823
BtgI CCRYGG 3 cut(s) 168, 204, 570
BtsCI GGATG 5 cut(s) 214, 255, 469, 556, 895
BtsI GCAGTG 1 cut(s) 840
BtsIMutI CAGTG 3 cut(s) 21, 541, 840
BveI ACCTGC 1 cut(s) 403
Cac8I GCNNGC 1 cut(s) 496
CciI TCATGA 1 cut(s) 999
CfoI GCGC 1 cut(s) 494
Csp6I GTAC 1 cut(s) 790
CviAII CATG 7 cut(s) 50, 169, 205, 274, 424, 694, 1000
CviQI GTAC 1 cut(s) 790
DdeI CTNAG 4 cut(s) 41, 321, 783, 885
DpnI GATC 2 cut(s) 135, 435
DpnII GATC 2 cut(s) 133, 433
DraI TTTAAA 1 cut(s) 966
EaeI YGGCCR 1 cut(s) 690
Eam1104I CTCTTC 1 cut(s) 122
EarI CTCTTC 1 cut(s) 122
Ecl136II GAGCTC 1 cut(s) 115
Eco130I CCWWGG 4 cut(s) 168, 204, 348, 666
Eco24I GRGCYC 2 cut(s) 117, 612
Eco53kI GAGCTC 1 cut(s) 115
EcoICRI GAGCTC 1 cut(s) 115
EcoRII CCWGG 1 cut(s) 687
EcoT14I CCWWGG 4 cut(s) 168, 204, 348, 666
EcoT38I GRGCYC 2 cut(s) 117, 612
ErhI CCWWGG 4 cut(s) 168, 204, 348, 666
FaeI CATG 7 cut(s) 53, 172, 208, 277, 427, 697, 1003
FalI AAGNNNNNCTT 2 cut(s) 776, 808
FaqI GGGAC 1 cut(s) 762
FatI CATG 7 cut(s) 49, 168, 204, 273, 423, 693, 999
FbaI TGATCA 1 cut(s) 133
FblI GTMKAC 1 cut(s) 183
Fnu4HI GCNGC 5 cut(s) 702, 756, 821, 831, 882
FokI GGATG 5 cut(s) 221, 262, 476, 563, 902
FriOI GRGCYC 2 cut(s) 117, 612
Fsp4HI GCNGC 5 cut(s) 702, 756, 821, 831, 882
FspBI CTAG 2 cut(s) 27, 677
GlaI GCGC 1 cut(s) 493
GluI GCNGC 5 cut(s) 702, 756, 821, 831, 882
GsaI CCCAGC 1 cut(s) 708
HaeIII GGCC 3 cut(s) 569, 692, 823
HapII CCGG 1 cut(s) 90
HhaI GCGC 1 cut(s) 494
Hin1II CATG 7 cut(s) 53, 172, 208, 277, 427, 697, 1003
Hin6I GCGC 1 cut(s) 492
HinP1I GCGC 1 cut(s) 492
HincII GTYRAC 1 cut(s) 24
HindII GTYRAC 1 cut(s) 24
HinfI GANTC 1 cut(s) 750
HpaII CCGG 1 cut(s) 90
HphI GGTGA 4 cut(s) 157, 575, 859, 925
Hpy166II GTNNAC 3 cut(s) 24, 184, 442
Hpy188I TCNGA 1 cut(s) 151
Hpy188III TCNNGA 4 cut(s) 217, 481, 677, 1000
Hpy8I GTNNAC 3 cut(s) 24, 184, 442
HpyAV CCTTC 4 cut(s) 310, 592, 848, 987
HpyCH4III ACNGT 2 cut(s) 519, 536
HpyCH4V TGCA 7 cut(s) 412, 469, 532, 544, 830, 863, 944
HpyF10VI GCNNNNNNNGC 6 cut(s) 121, 137, 680, 689, 698, 710
HpyF3I CTNAG 4 cut(s) 41, 321, 783, 885
Hsp92II CATG 7 cut(s) 53, 172, 208, 277, 427, 697, 1003
HspAI GCGC 1 cut(s) 492
Ksp22I TGATCA 1 cut(s) 133
Kzo9I GATC 2 cut(s) 133, 433
LguI GCTCTTC 1 cut(s) 122
LmnI GCTCC 1 cut(s) 718
Lsp1109I GCAGC 4 cut(s) 688, 742, 842, 893
LweI GCATC 3 cut(s) 199, 519, 769
MaeI CTAG 2 cut(s) 27, 677
MaeIII GTNAC 1 cut(s) 486
MalI GATC 2 cut(s) 135, 435
MboI GATC 2 cut(s) 133, 433
MboII GAAGA 7 cut(s) 47, 70, 109, 154, 325, 538, 884
MfeI CAATTG 1 cut(s) 588
MhlI GDGCHC 3 cut(s) 117, 612, 676
MlsI TGGCCA 1 cut(s) 692
MluCI AATT 2 cut(s) 473, 588
MluNI TGGCCA 1 cut(s) 692
MlyI GAGTC 1 cut(s) 744
MmeI TCCRAC 2 cut(s) 129, 219
Mox20I TGGCCA 1 cut(s) 692
MroXI GAANNNNTTC 1 cut(s) 224
MscI TGGCCA 1 cut(s) 692
MseI TTAA 3 cut(s) 501, 740, 965
MslI CAYNNNNRTG 2 cut(s) 14, 845
Msp20I TGGCCA 1 cut(s) 692
MspA1I CMGCKG 1 cut(s) 884
MspCI CTTAAG 1 cut(s) 500
MspI CCGG 1 cut(s) 90
MspR9I CCNGG 1 cut(s) 689
MunI CAATTG 1 cut(s) 588
Mva1269I GAATGC 2 cut(s) 292, 683
MvaI CCWGG 1 cut(s) 689
MvnI CGCG 1 cut(s) 492
MwoI GCNNNNNNNGC 6 cut(s) 121, 137, 680, 689, 698, 710
NcoI CCATGG 2 cut(s) 168, 204
NdeII GATC 2 cut(s) 133, 433
NlaIII CATG 7 cut(s) 53, 172, 208, 277, 427, 697, 1003
NmuCI GTSAC 1 cut(s) 486
NspI RCATGY 1 cut(s) 427
NspV TTCGAA 1 cut(s) 991
OliI CACNNNNGTG 2 cut(s) 14, 845
PagI TCATGA 1 cut(s) 999
PciI ACATGT 1 cut(s) 423
PciSI GCTCTTC 1 cut(s) 122
PctI GAATGC 2 cut(s) 292, 683
PdmI GAANNNNTTC 1 cut(s) 224
PkrI GCNGC 5 cut(s) 703, 757, 822, 832, 883
PleI GAGTC 1 cut(s) 744
PpsI GAGTC 1 cut(s) 744
PscI ACATGT 1 cut(s) 423
Psp124BI GAGCTC 1 cut(s) 117
Psp6I CCWGG 1 cut(s) 687
PspFI CCCAGC 1 cut(s) 704
PspGI CCWGG 1 cut(s) 687
PvuII CAGCTG 1 cut(s) 884
RsaI GTAC 1 cut(s) 791
RsaNI GTAC 1 cut(s) 790
RseI CAYNNNNRTG 2 cut(s) 14, 845
SacI GAGCTC 1 cut(s) 117
SapI GCTCTTC 1 cut(s) 122
SaqAI TTAA 3 cut(s) 501, 740, 965
SatI GCNGC 5 cut(s) 702, 756, 821, 831, 882
Sau3AI GATC 2 cut(s) 133, 433
ScaI AGTACT 1 cut(s) 791
SchI GAGTC 1 cut(s) 744
ScrFI CCNGG 1 cut(s) 689
SduI GDGCHC 3 cut(s) 117, 612, 676
SfaNI GCATC 3 cut(s) 199, 519, 769
SfuI TTCGAA 1 cut(s) 991
SmiMI CAYNNNNRTG 2 cut(s) 14, 845
SmlI CTYRAG 3 cut(s) 500, 650, 797
SmoI CTYRAG 3 cut(s) 500, 650, 797
SpeI ACTAGT 1 cut(s) 26
Sse9I AATT 2 cut(s) 473, 588
SsiI CCGC 3 cut(s) 763, 820, 845
SspI AATATT 1 cut(s) 1006
SspMI CTAG 2 cut(s) 27, 677
SstI GAGCTC 1 cut(s) 117
StyD4I CCNGG 1 cut(s) 687
StyI CCWWGG 4 cut(s) 168, 204, 348, 666
TaaI ACNGT 2 cut(s) 519, 536
TaqI TCGA 2 cut(s) 379, 991
TasI AATT 2 cut(s) 473, 588
TatI WGTACW 1 cut(s) 789
TauI GCSGC 1 cut(s) 823
Tru1I TTAA 3 cut(s) 501, 740, 965
Tru9I TTAA 3 cut(s) 501, 740, 965
TscAI CASTG 3 cut(s) 21, 541, 847
TseFI GTSAC 1 cut(s) 486
TseI GCWGC 4 cut(s) 701, 755, 830, 881
Tsp45I GTSAC 1 cut(s) 486
TspDTI ATGAA 7 cut(s) 71, 117, 266, 290, 299, 539, 1016
TspGWI ACGGA 1 cut(s) 587
TspRI CASTG 3 cut(s) 21, 541, 847
Vha464I CTTAAG 1 cut(s) 500
XapI RAATTY 1 cut(s) 473
XbaI TCTAGA 1 cut(s) 676
XceI RCATGY 1 cut(s) 427
XcmI CCANNNNNNNNNTGG 1 cut(s) 175
XmiI GTMKAC 1 cut(s) 183
XmnI GAANNNNTTC 1 cut(s) 224
XspI CTAG 2 cut(s) 27, 677
ZrmI AGTACT 1 cut(s) 791
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.