FvH4_5g31080

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000101
Physical Location & Seq
Forward (+)
21985350 .. 21987258
1909 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g31080.t1

Sequence Viewer

Length: 1242 bp
ATGGAGGACGCTGGTCTCCCCAATTCTTCAGCCGATGACCTCAAGAAACATGTAATGAAGGTTTTCGAGGAGGCCACCAAAGACCGTGAGGACATTTATTCGAAATACATGTTTGACCCGATCAGGGACTACGACTCCCTTAACGAGAATGCCATTCGAACCTACCATGTATTGGCCGCCGATTCCGGCCTTGCTGATGAAACCAAAGAGCTCTTTAAGCCTCGGCCTGAGTCGGGCATTCTCACTGACGTGGCCGTCTACACTATTATCATTTGGGCCTACACCTATGTCGACAAGACCGAGGCTGCTCTCAAGGTCTACCACCGGATGATAGCCGCCGGTGTCTCCCCCACTTGCTGCACTTACATCATACTCATCGACTCACTTGCGACACACTCGTCTTTCGATGTCAGTTTTCTTGGGTATGCCAAGAAGTACTTTTTGGAAATGTTGGATAAGGGGATGAAGCCCCCCTCTACCTCCTACATGACTGTGGTTGATGCCATTACCTGCTGTGAGTCAGCCGAGAAGGCCAGGGAGTTTGTTGAGCAGATACAAGCAAAGGGGTTTACCCCTGACTCCTATGTCCCTCACTTTGGAGAAGGCCACCTCGCAGAAGCAATGAAGGGAATAAAGCTCTATGCTGATCTTGTCAACAAGGCCACTGACAAGGATATGAAGAAAGAATTCCTCAACTGGCAAACCAAGCCGAAAGGCCTGAGCAGTTTGTCTGTGAAGATGATTAAAGCTTTGATTAAGGATGGCAATGCTGACGATGCCATCAAGATTTGTAAGCGCACTGCTGAGATCGGTATGCAGCCCACGGTTGTGATTCACACCTGCGTAATTGAAGCCTATCTCAAGCTTGGCAAGACCAAGGATGTTTTGGAGGCCTATTGGGGAATGTTAGCTGCTGGGGTTACCCCTAATTCCTACACTTACACTGTTTTAATCAAGGGACTCACTGCTGATCCCAACTTCTTTAGAGATGCCAAGAAGTGCTTCCTTGAGATGATGGAAAAGGGGTTGAGGCCCAATGTTGCTACCTACACTGCTGTGATAGAGAGCTTTGCAAAGCAGGAGGACAAGGCATGTGAGGAGGAGTGCAAAGAGTTGGTGGAAGTTATGATAAGCAAGGGGTTTGTTCCAAACGCAAAGGCTATGATGGAGGTTTTAAAGGGTAGACCAAAATCTCTAATAAGAGGAATAATGAACATTGTCCTATCCAAGTTGAGGAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

414

Amino Acids

46.2

Weight (kDa)

6.43

Isoelectric Point (pI)

28.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 78 - 127 3.2e-07 Pentatricopeptide repeat domain
PPR_2 PF13041 83 - 130 1e-09 PPR repeat family
TPR_24 PF23276 256 - 362 3.4e-06 Fungal tetratrico peptide repeats
PPR_2 PF13041 274 - 321 1.1e-10 PPR repeat family
PPR_3 PF13812 304 - 357 3.1e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 328 - 359 9.2e-06 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 848
AasI GACNNNNNNGTC 3 cut(s) 254, 397, 584
Acc36I ACCTGC 2 cut(s) 518, 848
AccB7I CCANNNNNTGG 1 cut(s) 172
AccI GTMKAC 4 cut(s) 258, 291, 318, 1183
AciI CCGC 2 cut(s) 177, 336
AclWI GGATC 1 cut(s) 965
AcoI YGGCCR 2 cut(s) 174, 252
AcsI RAATTY 1 cut(s) 686
AcuI CTGAAG 1 cut(s) 12
AfaI GTAC 1 cut(s) 437
AfiI CCNNNNNNNGG 5 cut(s) 124, 172, 233, 596, 1233
AflIII ACRYGT 2 cut(s) 49, 108
AgsI TTSAA 1 cut(s) 851
AjiI CACGTC 1 cut(s) 250
AjnI CCWGG 1 cut(s) 533
AjuI GAANNNNNNNTTGG 4 cut(s) 425, 457, 986, 1018
AleI CACNNNNGTG 3 cut(s) 248, 827, 1055
AluBI AGCT 7 cut(s) 211, 637, 749, 865, 911, 1068, 1239
AluI AGCT 7 cut(s) 211, 637, 749, 865, 911, 1068, 1239
Alw21I GWGCWC 1 cut(s) 213
Alw26I GTCTC 2 cut(s) 20, 349
AlwI GGATC 1 cut(s) 965
ApeKI GCWGC 4 cut(s) 305, 357, 817, 911
ApoI RAATTY 1 cut(s) 686
Asp700I GAANNNNTTC 3 cut(s) 62, 686, 1001
AspLEI GCGC 1 cut(s) 798
AspS9I GGNCC 2 cut(s) 276, 1032
AsuII TTCGAA 2 cut(s) 101, 157
BanII GRGCYC 1 cut(s) 213
Bbv12I GWGCWC 1 cut(s) 213
BbvI GCAGC 4 cut(s) 292, 344, 829, 898
BccI CCATC 4 cut(s) 755, 788, 1009, 1159
BceAI ACGGC 1 cut(s) 239
BcgI CGANNNNNNTGC 2 cut(s) 368, 402
BciT130I CCWGG 1 cut(s) 535
BcoDI GTCTC 2 cut(s) 20, 349
BfuAI ACCTGC 2 cut(s) 518, 848
BglI GCCNNNNNGGC 1 cut(s) 530
BisI GCNGC 6 cut(s) 177, 306, 336, 358, 818, 912
BlsI GCNGC 6 cut(s) 178, 307, 337, 359, 819, 913
BmcAI AGTACT 1 cut(s) 437
Bme1390I CCNGG 1 cut(s) 535
BmgBI CACGTC 1 cut(s) 250
BmgT120I GGNCC 2 cut(s) 276, 1032
BmrFI CCNGG 1 cut(s) 535
BmsI GCATC 3 cut(s) 490, 766, 979
BoxI GACNNNNGTC 1 cut(s) 12
Bpu10I CCTNAGC 1 cut(s) 719
Bpu14I TTCGAA 2 cut(s) 101, 157
BpuEI CTTGAG 4 cut(s) 26, 296, 845, 1028
BsaI GGTCTC 1 cut(s) 20
BsaJI CCNNGG 5 cut(s) 221, 300, 534, 822, 876
BsaWI WCCGGW 1 cut(s) 324
BsaXI ACNNNNNCTCC 2 cut(s) 119, 149
Bsc4I CCNNNNNNNGG 5 cut(s) 124, 172, 233, 596, 1233
Bse118I RCCGGY 1 cut(s) 338
Bse1I ACTGG 1 cut(s) 701
Bse3DI GCAATG 2 cut(s) 627, 772
BseBI CCWGG 1 cut(s) 535
BseDI CCNNGG 5 cut(s) 221, 300, 534, 822, 876
BseGI GGATG 4 cut(s) 333, 468, 766, 886
BseLI CCNNNNNNNGG 5 cut(s) 124, 172, 233, 596, 1233
BseMI GCAATG 2 cut(s) 627, 772
BseMII CTCAG 3 cut(s) 219, 710, 795
BseNI ACTGG 1 cut(s) 701
BseRI GAGGAG 3 cut(s) 83, 1112, 1115
BseXI GCAGC 4 cut(s) 292, 344, 829, 898
BseYI CCCAGC 1 cut(s) 914
BsgI GTGCAG 1 cut(s) 343
BsiHKAI GWGCWC 1 cut(s) 213
BsiSI CCGG 3 cut(s) 186, 325, 339
BslFI GGGAC 3 cut(s) 140, 572, 972
BslI CCNNNNNNNGG 5 cut(s) 124, 172, 233, 596, 1233
BsmAI GTCTC 2 cut(s) 20, 349
BsmFI GGGAC 3 cut(s) 140, 572, 972
BsmI GAATGC 2 cut(s) 154, 237
Bso31I GGTCTC 1 cut(s) 20
Bsp119I TTCGAA 2 cut(s) 101, 157
Bsp1286I GDGCHC 1 cut(s) 213
Bsp143I GATC 4 cut(s) 120, 646, 807, 970
BspACI CCGC 2 cut(s) 177, 336
BspCNI CTCAG 3 cut(s) 220, 711, 796
BspMI ACCTGC 2 cut(s) 518, 848
BspPI GGATC 1 cut(s) 965
BspT104I TTCGAA 2 cut(s) 101, 157
BspTNI GGTCTC 1 cut(s) 20
BsrDI GCAATG 2 cut(s) 627, 772
BsrFI RCCGGY 1 cut(s) 338
BsrI ACTGG 1 cut(s) 701
BssAI RCCGGY 1 cut(s) 338
BssECI CCNNGG 5 cut(s) 221, 300, 534, 822, 876
BssMI GATC 4 cut(s) 120, 646, 807, 970
BssT1I CCWWGG 1 cut(s) 876
Bst2UI CCWGG 1 cut(s) 535
Bst4CI ACNGT 4 cut(s) 86, 493, 826, 946
BstBI TTCGAA 2 cut(s) 101, 157
BstDEI CTNAG 3 cut(s) 228, 719, 804
BstDSI CCRYGG 1 cut(s) 822
BstEII GGTNACC 1 cut(s) 919
BstF5I GGATG 4 cut(s) 333, 468, 766, 886
BstHHI GCGC 1 cut(s) 798
BstKTI GATC 4 cut(s) 123, 649, 810, 973
BstMAI GTCTC 2 cut(s) 20, 349
BstMBI GATC 4 cut(s) 120, 646, 807, 970
BstMWI GCNNNNNNNGC 4 cut(s) 217, 530, 706, 776
BstNI CCWGG 1 cut(s) 535
BstNSI RCATGY 3 cut(s) 53, 112, 1095
BstPAI GACNNNNGTC 1 cut(s) 12
BstPI GGTNACC 1 cut(s) 919
BstSCI CCNGG 1 cut(s) 533
BstV1I GCAGC 4 cut(s) 292, 344, 829, 898
BtgI CCRYGG 1 cut(s) 822
BtrI CACGTC 1 cut(s) 250
BtsCI GGATG 4 cut(s) 333, 468, 766, 886
BtsI GCAGTG 3 cut(s) 798, 963, 1050
BtsIMutI CAGTG 6 cut(s) 243, 663, 798, 942, 963, 1050
BveI ACCTGC 2 cut(s) 518, 848
CfoI GCGC 1 cut(s) 798
Cfr10I RCCGGY 1 cut(s) 338
Cfr13I GGNCC 2 cut(s) 276, 1032
CseI GACGC 1 cut(s) 17
Csp6I GTAC 1 cut(s) 436
CviAII CATG 5 cut(s) 50, 109, 167, 487, 1092
CviQI GTAC 1 cut(s) 436
DdeI CTNAG 3 cut(s) 228, 719, 804
DpnI GATC 4 cut(s) 122, 648, 809, 972
DpnII GATC 4 cut(s) 120, 646, 807, 970
DraI TTTAAA 1 cut(s) 1176
DrdI GACNNNNNNGTC 3 cut(s) 254, 397, 584
DseDI GACNNNNNNGTC 3 cut(s) 254, 397, 584
EaeI YGGCCR 2 cut(s) 174, 252
Ecl136II GAGCTC 1 cut(s) 211
Eco130I CCWWGG 1 cut(s) 876
Eco147I AGGCCT 2 cut(s) 717, 893
Eco24I GRGCYC 1 cut(s) 213
Eco31I GGTCTC 1 cut(s) 20
Eco53kI GAGCTC 1 cut(s) 211
Eco57I CTGAAG 1 cut(s) 12
Eco91I GGTNACC 1 cut(s) 919
EcoICRI GAGCTC 1 cut(s) 211
EcoO65I GGTNACC 1 cut(s) 919
EcoRI GAATTC 1 cut(s) 686
EcoRII CCWGG 1 cut(s) 533
EcoT14I CCWWGG 1 cut(s) 876
EcoT38I GRGCYC 1 cut(s) 213
ErhI CCWWGG 1 cut(s) 876
FaeI CATG 5 cut(s) 53, 112, 170, 490, 1095
FalI AAGNNNNNCTT 4 cut(s) 422, 454, 986, 1018
FaqI GGGAC 3 cut(s) 140, 572, 972
FatI CATG 5 cut(s) 49, 108, 166, 486, 1091
FblI GTMKAC 4 cut(s) 258, 291, 318, 1183
Fnu4HI GCNGC 6 cut(s) 177, 306, 336, 358, 818, 912
FokI GGATG 4 cut(s) 340, 475, 773, 893
FriOI GRGCYC 1 cut(s) 213
Fsp4HI GCNGC 6 cut(s) 177, 306, 336, 358, 818, 912
GlaI GCGC 1 cut(s) 797
GluI GCNGC 6 cut(s) 177, 306, 336, 358, 818, 912
GsaI CCCAGC 1 cut(s) 918
HapII CCGG 3 cut(s) 186, 325, 339
HgaI GACGC 1 cut(s) 17
HhaI GCGC 1 cut(s) 798
Hin1II CATG 5 cut(s) 53, 112, 170, 490, 1095
Hin6I GCGC 1 cut(s) 796
HinP1I GCGC 1 cut(s) 796
HincII GTYRAC 2 cut(s) 292, 655
HindII GTYRAC 2 cut(s) 292, 655
HindIII AAGCTT 2 cut(s) 747, 863
HinfI GANTC 8 cut(s) 134, 182, 230, 380, 518, 578, 832, 960
HpaII CCGG 3 cut(s) 186, 325, 339
Hpy166II GTNNAC 6 cut(s) 259, 292, 319, 570, 655, 1184
Hpy188III TCNNGA 2 cut(s) 43, 784
Hpy8I GTNNAC 6 cut(s) 259, 292, 319, 570, 655, 1184
HpyAV CCTTC 4 cut(s) 52, 523, 596, 619
HpyCH4III ACNGT 4 cut(s) 86, 493, 826, 946
HpyCH4IV ACGT 1 cut(s) 249
HpyCH4V TGCA 4 cut(s) 360, 817, 1073, 1107
HpyF10VI GCNNNNNNNGC 4 cut(s) 217, 530, 706, 776
HpyF3I CTNAG 3 cut(s) 228, 719, 804
HpySE526I ACGT 1 cut(s) 249
Hsp92II CATG 5 cut(s) 53, 112, 170, 490, 1095
HspAI GCGC 1 cut(s) 796
Kzo9I GATC 4 cut(s) 120, 646, 807, 970
LmnI GCTCC 1 cut(s) 1236
Lsp1109I GCAGC 4 cut(s) 292, 344, 829, 898
LweI GCATC 3 cut(s) 490, 766, 979
MaeII ACGT 1 cut(s) 249
MaeIII GTNAC 1 cut(s) 919
MalI GATC 4 cut(s) 122, 648, 809, 972
MboI GATC 4 cut(s) 120, 646, 807, 970
MboII GAAGA 3 cut(s) 18, 691, 748
MhlI GDGCHC 1 cut(s) 213
MluCI AATT 4 cut(s) 22, 686, 846, 928
MlyI GAGTC 6 cut(s) 128, 239, 374, 527, 572, 954
MmeI TCCRAC 1 cut(s) 432
MroXI GAANNNNTTC 3 cut(s) 62, 686, 1001
MseI TTAA 6 cut(s) 141, 216, 744, 756, 950, 1175
MslI CAYNNNNRTG 4 cut(s) 248, 491, 827, 1055
MspI CCGG 3 cut(s) 186, 325, 339
MspR9I CCNGG 1 cut(s) 535
Mva1269I GAATGC 2 cut(s) 154, 237
MvaI CCWGG 1 cut(s) 535
MwoI GCNNNNNNNGC 4 cut(s) 217, 530, 706, 776
NdeII GATC 4 cut(s) 120, 646, 807, 970
NlaIII CATG 5 cut(s) 53, 112, 170, 490, 1095
NmeAIII GCCGAG 2 cut(s) 202, 550
NspI RCATGY 3 cut(s) 53, 112, 1095
NspV TTCGAA 2 cut(s) 101, 157
OliI CACNNNNGTG 3 cut(s) 248, 827, 1055
PaqCI CACCTGC 1 cut(s) 848
PceI AGGCCT 2 cut(s) 717, 893
PciI ACATGT 2 cut(s) 49, 108
PcsI WCGNNNNNNNCGW 1 cut(s) 297
PctI GAATGC 2 cut(s) 154, 237
PdmI GAANNNNTTC 3 cut(s) 62, 686, 1001
PfeI GAWTC 2 cut(s) 182, 832
PflMI CCANNNNNTGG 1 cut(s) 172
PkrI GCNGC 6 cut(s) 178, 307, 337, 359, 819, 913
PleI GAGTC 6 cut(s) 128, 238, 374, 526, 572, 954
PpsI GAGTC 6 cut(s) 128, 238, 374, 526, 572, 954
PscI ACATGT 2 cut(s) 49, 108
PshAI GACNNNNGTC 1 cut(s) 12
Psp124BI GAGCTC 1 cut(s) 213
Psp6I CCWGG 1 cut(s) 533
PspEI GGTNACC 1 cut(s) 919
PspFI CCCAGC 1 cut(s) 914
PspGI CCWGG 1 cut(s) 533
PspPI GGNCC 2 cut(s) 276, 1032
RsaI GTAC 1 cut(s) 437
RsaNI GTAC 1 cut(s) 436
RseI CAYNNNNRTG 4 cut(s) 248, 491, 827, 1055
SacI GAGCTC 1 cut(s) 213
SalI GTCGAC 1 cut(s) 290
SaqAI TTAA 6 cut(s) 141, 216, 744, 756, 950, 1175
SatI GCNGC 6 cut(s) 177, 306, 336, 358, 818, 912
Sau3AI GATC 4 cut(s) 120, 646, 807, 970
Sau96I GGNCC 2 cut(s) 276, 1032
ScaI AGTACT 1 cut(s) 437
SchI GAGTC 6 cut(s) 128, 239, 374, 527, 572, 954
ScrFI CCNGG 1 cut(s) 535
SduI GDGCHC 1 cut(s) 213
SfaNI GCATC 3 cut(s) 490, 766, 979
SfuI TTCGAA 2 cut(s) 101, 157
SgrAI CRCCGGYG 1 cut(s) 338
SmiMI CAYNNNNRTG 4 cut(s) 248, 491, 827, 1055
SmlI CTYRAG 4 cut(s) 41, 311, 860, 1007
SmoI CTYRAG 4 cut(s) 41, 311, 860, 1007
Sse9I AATT 4 cut(s) 22, 686, 846, 928
SseBI AGGCCT 2 cut(s) 717, 893
SsiI CCGC 2 cut(s) 177, 336
SstI GAGCTC 1 cut(s) 213
StuI AGGCCT 2 cut(s) 717, 893
StyD4I CCNGG 1 cut(s) 533
StyI CCWWGG 1 cut(s) 876
TaaI ACNGT 4 cut(s) 86, 493, 826, 946
TaiI ACGT 1 cut(s) 252
TaqI TCGA 6 cut(s) 66, 101, 157, 291, 378, 405
TaqII GACCGA 1 cut(s) 314
TasI AATT 4 cut(s) 22, 686, 846, 928
TatI WGTACW 1 cut(s) 435
TauI GCSGC 2 cut(s) 179, 338
TfiI GAWTC 2 cut(s) 182, 832
Tru1I TTAA 6 cut(s) 141, 216, 744, 756, 950, 1175
Tru9I TTAA 6 cut(s) 141, 216, 744, 756, 950, 1175
TscAI CASTG 6 cut(s) 250, 670, 805, 949, 970, 1057
TseI GCWGC 4 cut(s) 305, 357, 817, 911
TspDTI ATGAA 6 cut(s) 71, 213, 479, 638, 692, 1226
TspRI CASTG 6 cut(s) 250, 670, 805, 949, 970, 1057
Van91I CCANNNNNTGG 1 cut(s) 172
XapI RAATTY 1 cut(s) 686
XceI RCATGY 3 cut(s) 53, 112, 1095
XcmI CCANNNNNNNNNTGG 1 cut(s) 883
XmiI GTMKAC 4 cut(s) 258, 291, 318, 1183
XmnI GAANNNNTTC 3 cut(s) 62, 686, 1001
ZrmI AGTACT 1 cut(s) 437
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.