Rorug07G0294200

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000101
Physical Location & Seq
Reverse (-)
28755602 .. 28756462
861 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0294200.1

Sequence Viewer

Length: 861 bp
ATGGATTTTGATGTTCTTAGTTGGAATTGCAGAGGGATCTGCAATGATGCTACAACTAGGGCTCTGAAGGATTTGTGCTCTCAGAATCGCCCACAGATTGTATTCTTATGTGAGACTAAGATTAGCAGAGTTGAGGACTTTGAGAAGTTACGTAGGGCGCTAGGCTTCGCTCATGCTGAGGAGGTTTTAAGTGCAGGGCAGGTTGGGGGTCTGGGACTTTTTTGGACTGATGATGTGAAGATTCAGATTGGCACCAAATCTGCACATGATATCGACACCGTGGTTGTGGGTGAATCTGGGGCTCCGTCATGGAGATTGACGGGTTTTTACGGATATGCTCGAACTGGTGAAAGGGATAGGTCATGGCAGTTGTTGCGTGACCTTTCCGATAGTGATTCCCTTCCTTGGGTGATCATAGGAGACTTCAACGAGATTCTTAACAATGGGGAGAAGGTTGCAGGCCCAATCAGATCGAAGAGACAAATGAGAGGCTTCCGGGAGGCATTGGGCTATTGTGATCTTCTGGATTTGGGGTATCAGGGGGCCATGGCTACTTGGTGGAATTCAGAAACTTTGCTGCGGTTGGATCGTGCTGTGTGCACCCCATCGTGGGTTGATATCTTTAACCATACTAGAGTCAATCATCTGGCACCTTCGGACTCAGATCATGCTCCTATTCTTCTGCGCGCTAGTACAGCCCCTCTTCTGGTAAGGCCTAAATATCATCGCTTCAAGTTTGAAGCGTTTTGGTTACAACACCCGGATTGTGATGGGGTAGTGAAGGAGGCGTGGGGAACGGACGTGTCTGGCACACCTATGTTTTGTGCTACCAAGAAGATCATGCACACTAGAATTCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

286

Amino Acids

32.32

Weight (kDa)

6.5

Isoelectric Point (pI)

30.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo_endo_phos PF03372 6 - 223 1.1e-18 Endonuclease/Exonuclease/phosphatase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 190
AccB1I GGYRCC 2 cut(s) 251, 649
AccII CGCG 1 cut(s) 687
AciI CCGC 1 cut(s) 580
AclWI GGATC 2 cut(s) 44, 594
AcsI RAATTY 2 cut(s) 562, 852
AcuI CTGAAG 1 cut(s) 86
AfaI GTAC 1 cut(s) 694
AfiI CCNNNNNNNGG 5 cut(s) 405, 406, 609, 610, 706
AflIII ACRYGT 1 cut(s) 801
AgsI TTSAA 3 cut(s) 427, 733, 740
AjiI CACGTC 1 cut(s) 802
Alw21I GWGCWC 2 cut(s) 80, 602
Alw26I GTCTC 3 cut(s) 107, 414, 472
Alw44I GTGCAC 1 cut(s) 598
AlwI GGATC 2 cut(s) 44, 594
AoxI GGCC 3 cut(s) 460, 543, 713
ApaLI GTGCAC 1 cut(s) 598
ApeKI GCWGC 1 cut(s) 577
ApoI RAATTY 2 cut(s) 562, 852
AspLEI GCGC 3 cut(s) 160, 687, 689
AspS9I GGNCC 2 cut(s) 461, 543
AsuC2I CCSGG 2 cut(s) 497, 761
AsuHPI GGTGA 3 cut(s) 302, 359, 421
BaeGI GKGCMC 1 cut(s) 602
BanI GGYRCC 2 cut(s) 251, 649
BanII GRGCYC 2 cut(s) 64, 304
Bbv12I GWGCWC 2 cut(s) 80, 602
BbvCI CCTCAGC 1 cut(s) 177
BbvI GCAGC 1 cut(s) 564
BccI CCATC 2 cut(s) 613, 764
BclI TGATCA 1 cut(s) 411
BcnI CCSGG 2 cut(s) 497, 761
BcoDI GTCTC 3 cut(s) 107, 414, 472
BfaI CTAG 5 cut(s) 57, 161, 633, 690, 849
BfoI RGCGCY 1 cut(s) 161
BfuAI ACCTGC 1 cut(s) 190
BisI GCNGC 1 cut(s) 578
BlsI GCNGC 1 cut(s) 579
Bme1390I CCNGG 2 cut(s) 497, 761
BmgBI CACGTC 1 cut(s) 802
BmgT120I GGNCC 2 cut(s) 461, 543
BmiI GGNNCC 4 cut(s) 253, 303, 544, 651
BmrFI CCNGG 2 cut(s) 497, 761
BmsI GCATC 1 cut(s) 37
Bpu10I CCTNAGC 1 cut(s) 177
BpuMI CCSGG 2 cut(s) 497, 761
BsaAI YACGTR 1 cut(s) 152
BsaJI CCNNGG 3 cut(s) 279, 404, 546
Bsc4I CCNNNNNNNGG 5 cut(s) 405, 406, 609, 610, 706
Bse1I ACTGG 1 cut(s) 349
Bse3DI GCAATG 1 cut(s) 49
BseDI CCNNGG 3 cut(s) 279, 404, 546
BseLI CCNNNNNNNGG 5 cut(s) 405, 406, 609, 610, 706
BseMI GCAATG 1 cut(s) 49
BseMII CTCAG 3 cut(s) 95, 168, 675
BseNI ACTGG 1 cut(s) 349
BsePI GCGCGC 1 cut(s) 685
BseRI GAGGAG 1 cut(s) 194
BseSI GKGCMC 1 cut(s) 602
BseXI GCAGC 1 cut(s) 564
BsgI GTGCAG 2 cut(s) 213, 246
Bsh1236I CGCG 1 cut(s) 687
BshFI GGCC 3 cut(s) 462, 545, 715
BshNI GGYRCC 2 cut(s) 251, 649
BsiHKAI GWGCWC 2 cut(s) 80, 602
BsiSI CCGG 2 cut(s) 496, 761
BslFI GGGAC 1 cut(s) 228
BslI CCNNNNNNNGG 5 cut(s) 405, 406, 609, 610, 706
BsmAI GTCTC 3 cut(s) 107, 414, 472
BsmFI GGGAC 1 cut(s) 228
BsnI GGCC 3 cut(s) 462, 545, 715
Bsp1286I GDGCHC 4 cut(s) 64, 80, 304, 602
Bsp143I GATC 7 cut(s) 36, 411, 470, 517, 586, 664, 837
Bsp19I CCATGG 1 cut(s) 546
BspACI CCGC 1 cut(s) 580
BspANI GGCC 3 cut(s) 462, 545, 715
BspCNI CTCAG 3 cut(s) 94, 169, 674
BspFNI CGCG 1 cut(s) 687
BspLI GGNNCC 4 cut(s) 253, 303, 544, 651
BspMI ACCTGC 1 cut(s) 190
BspPI GGATC 2 cut(s) 44, 594
BspT107I GGYRCC 2 cut(s) 251, 649
BsrDI GCAATG 1 cut(s) 49
BsrI ACTGG 1 cut(s) 349
BssECI CCNNGG 3 cut(s) 279, 404, 546
BssHII GCGCGC 1 cut(s) 685
BssMI GATC 7 cut(s) 36, 411, 470, 517, 586, 664, 837
BssT1I CCWWGG 2 cut(s) 404, 546
Bst4CI ACNGT 1 cut(s) 280
Bst6I CTCTTC 2 cut(s) 470, 708
BstAPI GCANNNNNTGC 1 cut(s) 373
BstBAI YACGTR 1 cut(s) 152
BstC8I GCNNGC 2 cut(s) 460, 687
BstDEI CTNAG 5 cut(s) 17, 81, 117, 177, 661
BstDSI CCRYGG 2 cut(s) 279, 546
BstFNI CGCG 1 cut(s) 687
BstH2I RGCGCY 1 cut(s) 161
BstHHI GCGC 3 cut(s) 160, 687, 689
BstKTI GATC 7 cut(s) 39, 414, 473, 520, 589, 667, 840
BstMAI GTCTC 3 cut(s) 107, 414, 472
BstMBI GATC 7 cut(s) 36, 411, 470, 517, 586, 664, 837
BstMWI GCNNNNNNNGC 2 cut(s) 373, 695
BstSCI CCNGG 2 cut(s) 495, 759
BstSLI GKGCMC 1 cut(s) 602
BstSNI TACGTA 1 cut(s) 152
BstUI CGCG 1 cut(s) 687
BstV1I GCAGC 1 cut(s) 564
BstX2I RGATCY 1 cut(s) 36
BstYI RGATCY 1 cut(s) 36
BsuRI GGCC 3 cut(s) 462, 545, 715
BtgI CCRYGG 2 cut(s) 279, 546
BtgZI GCGATG 1 cut(s) 710
BtrI CACGTC 1 cut(s) 802
BveI ACCTGC 1 cut(s) 190
Cac8I GCNNGC 2 cut(s) 460, 687
CfoI GCGC 3 cut(s) 160, 687, 689
Cfr13I GGNCC 2 cut(s) 461, 543
Csp6I GTAC 1 cut(s) 693
CviAII CATG 7 cut(s) 173, 266, 309, 363, 547, 668, 841
CviQI GTAC 1 cut(s) 693
DdeI CTNAG 5 cut(s) 17, 81, 117, 177, 661
DpnI GATC 7 cut(s) 38, 413, 472, 519, 588, 666, 839
DpnII GATC 7 cut(s) 36, 411, 470, 517, 586, 664, 837
Eam1104I CTCTTC 2 cut(s) 470, 708
EarI CTCTTC 2 cut(s) 470, 708
Eco105I TACGTA 1 cut(s) 152
Eco130I CCWWGG 2 cut(s) 404, 546
Eco147I AGGCCT 1 cut(s) 715
Eco24I GRGCYC 2 cut(s) 64, 304
Eco32I GATATC 2 cut(s) 271, 619
Eco57I CTGAAG 1 cut(s) 86
EcoRI GAATTC 2 cut(s) 562, 852
EcoRV GATATC 2 cut(s) 271, 619
EcoT14I CCWWGG 2 cut(s) 404, 546
EcoT38I GRGCYC 2 cut(s) 64, 304
ErhI CCWWGG 2 cut(s) 404, 546
FaeI CATG 7 cut(s) 176, 269, 312, 366, 550, 671, 844
FaqI GGGAC 1 cut(s) 228
FatI CATG 7 cut(s) 172, 265, 308, 362, 546, 667, 840
FbaI TGATCA 1 cut(s) 411
Fnu4HI GCNGC 1 cut(s) 578
FriOI GRGCYC 2 cut(s) 64, 304
Fsp4HI GCNGC 1 cut(s) 578
FspBI CTAG 5 cut(s) 57, 161, 633, 690, 849
GlaI GCGC 3 cut(s) 159, 686, 688
GluI GCNGC 1 cut(s) 578
HaeII RGCGCY 1 cut(s) 161
HaeIII GGCC 3 cut(s) 462, 545, 715
HapII CCGG 2 cut(s) 496, 761
HhaI GCGC 3 cut(s) 160, 687, 689
Hin1II CATG 7 cut(s) 176, 269, 312, 366, 550, 671, 844
Hin6I GCGC 3 cut(s) 158, 685, 687
HinP1I GCGC 3 cut(s) 158, 685, 687
HinfI GANTC 7 cut(s) 85, 241, 293, 395, 433, 636, 659
HpaII CCGG 2 cut(s) 496, 761
HphI GGTGA 3 cut(s) 302, 359, 421
Hpy166II GTNNAC 1 cut(s) 600
Hpy188I TCNGA 8 cut(s) 66, 84, 246, 388, 470, 568, 658, 664
Hpy188III TCNNGA 1 cut(s) 524
Hpy8I GTNNAC 1 cut(s) 600
HpyAV CCTTC 5 cut(s) 61, 410, 445, 663, 775
HpyCH4III ACNGT 1 cut(s) 280
HpyCH4IV ACGT 2 cut(s) 151, 801
HpyCH4V TGCA 7 cut(s) 30, 42, 194, 263, 458, 600, 844
HpyF10VI GCNNNNNNNGC 2 cut(s) 373, 695
HpyF3I CTNAG 5 cut(s) 17, 81, 117, 177, 661
HpySE526I ACGT 2 cut(s) 151, 801
Hsp92II CATG 7 cut(s) 176, 269, 312, 366, 550, 671, 844
HspAI GCGC 3 cut(s) 158, 685, 687
Ksp22I TGATCA 1 cut(s) 411
Kzo9I GATC 7 cut(s) 36, 411, 470, 517, 586, 664, 837
LmnI GCTCC 2 cut(s) 307, 676
Lsp1109I GCAGC 1 cut(s) 564
LweI GCATC 1 cut(s) 37
MaeI CTAG 5 cut(s) 57, 161, 633, 690, 849
MaeII ACGT 2 cut(s) 151, 801
MaeIII GTNAC 3 cut(s) 147, 377, 750
MalI GATC 7 cut(s) 38, 413, 472, 519, 588, 666, 839
MboI GATC 7 cut(s) 36, 411, 470, 517, 586, 664, 837
MboII GAAGA 6 cut(s) 250, 487, 512, 671, 695, 847
MflI RGATCY 1 cut(s) 36
MhlI GDGCHC 4 cut(s) 64, 80, 304, 602
MluCI AATT 3 cut(s) 25, 562, 852
MlyI GAGTC 2 cut(s) 645, 653
MmeI TCCRAC 1 cut(s) 564
MnlI CCTC 8 cut(s) 26, 127, 172, 175, 482, 493, 711, 778
MseI TTAA 3 cut(s) 188, 438, 624
MslI CAYNNNNRTG 1 cut(s) 815
MspI CCGG 2 cut(s) 496, 761
MspR9I CCNGG 2 cut(s) 497, 761
MvnI CGCG 1 cut(s) 687
MwoI GCNNNNNNNGC 2 cut(s) 373, 695
NciI CCSGG 2 cut(s) 497, 761
NcoI CCATGG 1 cut(s) 546
NdeII GATC 7 cut(s) 36, 411, 470, 517, 586, 664, 837
NlaIII CATG 7 cut(s) 176, 269, 312, 366, 550, 671, 844
NlaIV GGNNCC 4 cut(s) 253, 303, 544, 651
NmuCI GTSAC 1 cut(s) 377
PauI GCGCGC 1 cut(s) 685
PceI AGGCCT 1 cut(s) 715
PfeI GAWTC 5 cut(s) 85, 241, 293, 395, 433
PfoI TCCNGGA 1 cut(s) 495
PkrI GCNGC 1 cut(s) 579
PleI GAGTC 2 cut(s) 644, 653
PpsI GAGTC 2 cut(s) 644, 653
Ppu21I YACGTR 1 cut(s) 152
PspN4I GGNNCC 4 cut(s) 253, 303, 544, 651
PspPI GGNCC 2 cut(s) 461, 543
PsuI RGATCY 1 cut(s) 36
PteI GCGCGC 1 cut(s) 685
RsaI GTAC 1 cut(s) 694
RsaNI GTAC 1 cut(s) 693
RseI CAYNNNNRTG 1 cut(s) 815
SaqAI TTAA 3 cut(s) 188, 438, 624
SatI GCNGC 1 cut(s) 578
Sau3AI GATC 7 cut(s) 36, 411, 470, 517, 586, 664, 837
Sau96I GGNCC 2 cut(s) 461, 543
SchI GAGTC 2 cut(s) 645, 653
ScrFI CCNGG 2 cut(s) 497, 761
SduI GDGCHC 4 cut(s) 64, 80, 304, 602
SetI ASST 9 cut(s) 154, 186, 204, 362, 384, 456, 655, 804, 817
SfaNI GCATC 1 cut(s) 37
SmiMI CAYNNNNRTG 1 cut(s) 815
SnaBI TACGTA 1 cut(s) 152
Sse9I AATT 3 cut(s) 25, 562, 852
SseBI AGGCCT 1 cut(s) 715
SsiI CCGC 1 cut(s) 580
SspMI CTAG 5 cut(s) 57, 161, 633, 690, 849
StuI AGGCCT 1 cut(s) 715
StyD4I CCNGG 2 cut(s) 495, 759
StyI CCWWGG 2 cut(s) 404, 546
TaaI ACNGT 1 cut(s) 280
TaiI ACGT 2 cut(s) 154, 804
TaqI TCGA 3 cut(s) 273, 340, 473
TasI AATT 3 cut(s) 25, 562, 852
TatI WGTACW 1 cut(s) 692
TfiI GAWTC 5 cut(s) 85, 241, 293, 395, 433
Tru1I TTAA 3 cut(s) 188, 438, 624
Tru9I TTAA 3 cut(s) 188, 438, 624
TseFI GTSAC 1 cut(s) 377
TseI GCWGC 1 cut(s) 577
Tsp45I GTSAC 1 cut(s) 377
TspDTI ATGAA 1 cut(s) 845
TspGWI ACGGA 3 cut(s) 294, 345, 812
VneI GTGCAC 1 cut(s) 598
XapI RAATTY 2 cut(s) 562, 852
XspI CTAG 5 cut(s) 57, 161, 633, 690, 849
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.