FvH4_7g08990

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000101
Physical Location & Seq
Forward (+)
8789213 .. 8790238
1026 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g08990.t1

Sequence Viewer

Length: 1026 bp
ATGGCGGAAGTCGCTGGATTGAAATCGATTGGGGCAGTTGATGACCTGGAGCAGCCGCCGGAGGACTTGCGAGAAGTACTGGAAAAGATGTTTACCGAGGAAGCTATGAGCAGAAATACAATCAAGATGGTGGAGGGTTTGTTGAGGGATGGCTTTGGGAGTGTTGGCTTGGAGATTGCGGCCGAGGTTGAGGAGACCAATGAGGTTCCCAGGGTGGTCACTGGCACTGCTGTGATGGAGTACTACATCAATGCCACCGGAGACAGGACCAAGGACGCTCGTAGAGTGTTTAAGCACATGTCGGCTTCAGGGGTGGAGCCGAATGCCTACACATATGGCATTATCATCAAGGCTCTTCCTGCTGCTGACCTCAAGAAGAACCCCAATTTTGTTGGCTATGCTAAGAAGTACGTTGTGGAGATGTTGGGCAGGGGAATGCAGCCAAATGAGGAGACTTATGAGGCTGTGTTGGATGGTATTGGCCGCGGTGAGAACAAGGCTGAAGCTGAGGAGGAGCGCAGGGTGTTTGTGGGGAAAGTGAAAGCAAAGGGATTTATGCTGTTGCTCCAGAAGGAGGCTGAGGAGATGGTTAATCCTGCACCACTGAAGTGCGAGATGGATATGCTTAAGGAACATGTGATGAACTTGTTTGAGGATGTCAGCAGAGCCTTTGAAGACAAGAACGAGAGAAAGAGAGTCAGACAGATGGCGGAGGACTATGACTCACTGAGCTCAACTGCATTTACTTTTTATGAAGCTTTGGTAAGTAGGGGGATCAATGAGGAAGCCAATGAGCTCTTTAAGCCTCTGTTGGAGACAGCCATACTGCCTGACGAGGCTGTCTTTCTCATTGTCATCCTTCTTAGCGAGACCACAAGTGATGCTCTGAAGGTGTATGAGCATATGTTAGCTTATGGGATCACCCCAAGCTCCTGCACTTACAGTGTACTCATCGCAAAACTTTCTCTTGATTCCAATTTCATTGGGGGTATTCAGCGCACCCGTCCATCTCCGCCGTCCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

342

Amino Acids

37.98

Weight (kDa)

4.84

Isoelectric Point (pI)

40.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 70 - 119 3.7e-09 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 839
AccII CGCG 1 cut(s) 486
AciI CCGC 7 cut(s) 5, 56, 179, 484, 486, 710, 1013
AclWI GGATC 2 cut(s) 782, 926
AcoI YGGCCR 2 cut(s) 180, 481
AcuI CTGAAG 4 cut(s) 291, 522, 626, 908
AfaI GTAC 4 cut(s) 78, 242, 410, 948
AfiI CCNNNNNNNGG 2 cut(s) 264, 574
AflII CTTAAG 1 cut(s) 626
AflIII ACRYGT 2 cut(s) 297, 634
AgsI TTSAA 2 cut(s) 22, 674
AjnI CCWGG 2 cut(s) 45, 209
AleI CACNNNNGTG 2 cut(s) 230, 607
AluBI AGCT 7 cut(s) 104, 506, 732, 758, 796, 911, 930
AluI AGCT 7 cut(s) 104, 506, 732, 758, 796, 911, 930
Alw21I GWGCWC 2 cut(s) 734, 798
Alw26I GTCTC 5 cut(s) 188, 255, 446, 809, 863
AlwI GGATC 2 cut(s) 782, 926
AoxI GGCC 2 cut(s) 180, 481
ApeKI GCWGC 3 cut(s) 52, 362, 439
AspLEI GCGC 2 cut(s) 519, 999
AspS9I GGNCC 1 cut(s) 267
AsuHPI GGTGA 2 cut(s) 500, 913
AvaII GGWCC 1 cut(s) 267
BanII GRGCYC 2 cut(s) 734, 798
BbsI GAAGAC 1 cut(s) 681
Bbv12I GWGCWC 2 cut(s) 734, 798
BbvCI CCTCAGC 2 cut(s) 507, 579
BbvI GCAGC 3 cut(s) 64, 349, 451
BccI CCATC 8 cut(s) 121, 143, 229, 467, 580, 610, 700, 1015
BceAI ACGGC 1 cut(s) 1000
BciT130I CCWGG 2 cut(s) 47, 211
BcoDI GTCTC 5 cut(s) 188, 255, 446, 809, 863
BfrI CTTAAG 1 cut(s) 626
BisI GCNGC 6 cut(s) 53, 56, 180, 363, 440, 484
BlsI GCNGC 6 cut(s) 54, 57, 181, 364, 441, 485
BmcAI AGTACT 2 cut(s) 78, 242
Bme1390I CCNGG 2 cut(s) 47, 211
Bme18I GGWCC 1 cut(s) 267
BmgT120I GGNCC 1 cut(s) 267
BmiI GGNNCC 2 cut(s) 207, 318
BmrFI CCNGG 2 cut(s) 47, 211
BmsI GCATC 1 cut(s) 871
BpiI GAAGAC 1 cut(s) 681
BpmI CTGGAG 2 cut(s) 68, 551
Bpu10I CCTNAGC 2 cut(s) 507, 579
BpuEI CTTGAG 1 cut(s) 356
Bsa29I ATCGAT 1 cut(s) 26
BsaBI GATNNNNATC 1 cut(s) 22
BsaI GGTCTC 2 cut(s) 188, 863
BsaJI CCNNGG 6 cut(s) 96, 183, 209, 210, 270, 484
BsaWI WCCGGW 1 cut(s) 257
BsaXI ACNNNNNCTCC 2 cut(s) 125, 155
Bsc4I CCNNNNNNNGG 2 cut(s) 264, 574
Bse1I ACTGG 2 cut(s) 84, 226
Bse8I GATNNNNATC 1 cut(s) 22
BseBI CCWGG 2 cut(s) 47, 211
BseCI ATCGAT 1 cut(s) 26
BseDI CCNNGG 6 cut(s) 96, 183, 209, 210, 270, 484
BseGI GGATG 4 cut(s) 154, 478, 661, 855
BseJI GATNNNNATC 1 cut(s) 22
BseLI CCNNNNNNNGG 2 cut(s) 264, 574
BseMII CTCAG 3 cut(s) 498, 570, 719
BseNI ACTGG 2 cut(s) 84, 226
BseRI GAGGAG 5 cut(s) 206, 464, 524, 527, 596
BseX3I CGGCCG 1 cut(s) 180
BseXI GCAGC 3 cut(s) 64, 349, 451
BsgI GTGCAG 2 cut(s) 582, 919
Bsh1236I CGCG 1 cut(s) 486
Bsh1285I CGRYCG 1 cut(s) 183
BshFI GGCC 2 cut(s) 182, 483
BshVI ATCGAT 1 cut(s) 26
BsiEI CGRYCG 1 cut(s) 183
BsiHKAI GWGCWC 2 cut(s) 734, 798
BsiSI CCGG 2 cut(s) 59, 258
BslI CCNNNNNNNGG 2 cut(s) 264, 574
BsmAI GTCTC 5 cut(s) 188, 255, 446, 809, 863
BsmI GAATGC 2 cut(s) 328, 441
BsnI GGCC 2 cut(s) 182, 483
Bso31I GGTCTC 2 cut(s) 188, 863
Bsp1286I GDGCHC 2 cut(s) 734, 798
Bsp143I GATC 2 cut(s) 774, 918
BspACI CCGC 7 cut(s) 5, 56, 179, 484, 486, 710, 1013
BspANI GGCC 2 cut(s) 182, 483
BspCNI CTCAG 3 cut(s) 499, 571, 720
BspDI ATCGAT 1 cut(s) 26
BspFNI CGCG 1 cut(s) 486
BspLI GGNNCC 2 cut(s) 207, 318
BspPI GGATC 2 cut(s) 782, 926
BspQI GCTCTTC 1 cut(s) 360
BspTI CTTAAG 1 cut(s) 626
BspTNI GGTCTC 2 cut(s) 188, 863
BsrI ACTGG 2 cut(s) 84, 226
BssECI CCNNGG 6 cut(s) 96, 183, 209, 210, 270, 484
BssMI GATC 2 cut(s) 774, 918
BssT1I CCWWGG 1 cut(s) 270
Bst2UI CCWGG 2 cut(s) 47, 211
Bst4CI ACNGT 1 cut(s) 944
Bst6I CTCTTC 1 cut(s) 360
BstAFI CTTAAG 1 cut(s) 626
BstDEI CTNAG 5 cut(s) 402, 507, 579, 728, 863
BstDSI CCRYGG 1 cut(s) 484
BstF5I GGATG 4 cut(s) 154, 478, 661, 855
BstFNI CGCG 1 cut(s) 486
BstHHI GCGC 2 cut(s) 519, 999
BstKTI GATC 2 cut(s) 777, 921
BstMAI GTCTC 5 cut(s) 188, 255, 446, 809, 863
BstMBI GATC 2 cut(s) 774, 918
BstMCI CGRYCG 1 cut(s) 183
BstMWI GCNNNNNNNGC 3 cut(s) 11, 359, 802
BstNI CCWGG 2 cut(s) 47, 211
BstNSI RCATGY 2 cut(s) 301, 638
BstSCI CCNGG 2 cut(s) 45, 209
BstUI CGCG 1 cut(s) 486
BstV1I GCAGC 3 cut(s) 64, 349, 451
BstV2I GAAGAC 1 cut(s) 681
BstZI CGGCCG 1 cut(s) 180
Bsu15I ATCGAT 1 cut(s) 26
BsuRI GGCC 2 cut(s) 182, 483
BsuTUI ATCGAT 1 cut(s) 26
BtgI CCRYGG 1 cut(s) 484
BtgZI GCGATG 1 cut(s) 937
BtsCI GGATG 4 cut(s) 154, 478, 661, 855
BtsI GCAGTG 1 cut(s) 225
BtsIMutI CAGTG 5 cut(s) 219, 225, 602, 725, 949
CfoI GCGC 2 cut(s) 519, 999
Cfr13I GGNCC 1 cut(s) 267
Cfr42I CCGCGG 1 cut(s) 487
ClaI ATCGAT 1 cut(s) 26
CseI GACGC 1 cut(s) 284
Csp6I GTAC 4 cut(s) 77, 241, 409, 947
CviAII CATG 2 cut(s) 298, 635
CviQI GTAC 4 cut(s) 77, 241, 409, 947
DdeI CTNAG 5 cut(s) 402, 507, 579, 728, 863
DpnI GATC 2 cut(s) 776, 920
DpnII GATC 2 cut(s) 774, 918
DrdI GACNNNNNNGTC 1 cut(s) 839
DseDI GACNNNNNNGTC 1 cut(s) 839
EaeI YGGCCR 2 cut(s) 180, 481
EagI CGGCCG 1 cut(s) 180
Eam1104I CTCTTC 1 cut(s) 360
EarI CTCTTC 1 cut(s) 360
EciI GGCGGA 3 cut(s) 20, 725, 1002
Ecl136II GAGCTC 2 cut(s) 732, 796
EclXI CGGCCG 1 cut(s) 180
Eco130I CCWWGG 1 cut(s) 270
Eco24I GRGCYC 2 cut(s) 734, 798
Eco31I GGTCTC 2 cut(s) 188, 863
Eco47I GGWCC 1 cut(s) 267
Eco52I CGGCCG 1 cut(s) 180
Eco53kI GAGCTC 2 cut(s) 732, 796
Eco57I CTGAAG 4 cut(s) 291, 522, 626, 908
EcoICRI GAGCTC 2 cut(s) 732, 796
EcoRII CCWGG 2 cut(s) 45, 209
EcoT14I CCWWGG 1 cut(s) 270
EcoT38I GRGCYC 2 cut(s) 734, 798
ErhI CCWWGG 1 cut(s) 270
FaeI CATG 2 cut(s) 301, 638
FatI CATG 2 cut(s) 297, 634
FauNDI CATATG 2 cut(s) 334, 903
Fnu4HI GCNGC 6 cut(s) 53, 56, 180, 363, 440, 484
FokI GGATG 4 cut(s) 161, 485, 668, 842
FriOI GRGCYC 2 cut(s) 734, 798
Fsp4HI GCNGC 6 cut(s) 53, 56, 180, 363, 440, 484
GlaI GCGC 2 cut(s) 518, 998
GluI GCNGC 6 cut(s) 53, 56, 180, 363, 440, 484
GsuI CTGGAG 2 cut(s) 68, 551
HaeIII GGCC 2 cut(s) 182, 483
HapII CCGG 2 cut(s) 59, 258
HgaI GACGC 1 cut(s) 284
HhaI GCGC 2 cut(s) 519, 999
Hin1II CATG 2 cut(s) 301, 638
Hin6I GCGC 2 cut(s) 517, 997
HinP1I GCGC 2 cut(s) 517, 997
HindIII AAGCTT 1 cut(s) 756
HinfI GANTC 3 cut(s) 696, 722, 971
HpaII CCGG 2 cut(s) 59, 258
HphI GGTGA 2 cut(s) 500, 913
Hpy166II GTNNAC 2 cut(s) 93, 947
Hpy188I TCNGA 2 cut(s) 701, 888
Hpy188III TCNNGA 4 cut(s) 124, 373, 568, 968
Hpy8I GTNNAC 2 cut(s) 93, 947
HpyAV CCTTC 3 cut(s) 565, 869, 883
HpyCH4III ACNGT 1 cut(s) 944
HpyCH4IV ACGT 1 cut(s) 411
HpyCH4V TGCA 4 cut(s) 439, 599, 740, 936
HpyF10VI GCNNNNNNNGC 3 cut(s) 11, 359, 802
HpyF3I CTNAG 5 cut(s) 402, 507, 579, 728, 863
HpySE526I ACGT 1 cut(s) 411
Hsp92II CATG 2 cut(s) 301, 638
HspAI GCGC 2 cut(s) 517, 997
KspI CCGCGG 1 cut(s) 487
Kzo9I GATC 2 cut(s) 774, 918
LguI GCTCTTC 1 cut(s) 360
LmnI GCTCC 5 cut(s) 49, 316, 514, 570, 935
Lsp1109I GCAGC 3 cut(s) 64, 349, 451
LweI GCATC 1 cut(s) 871
MaeII ACGT 1 cut(s) 411
MaeIII GTNAC 1 cut(s) 217
MalI GATC 2 cut(s) 776, 920
MboI GATC 2 cut(s) 774, 918
MboII GAAGA 3 cut(s) 347, 388, 686
MhlI GDGCHC 2 cut(s) 734, 798
MluCI AATT 2 cut(s) 385, 976
MlyI GAGTC 2 cut(s) 705, 716
MmeI TCCRAC 2 cut(s) 450, 792
MseI TTAA 4 cut(s) 291, 591, 627, 801
MslI CAYNNNNRTG 2 cut(s) 230, 607
MspA1I CMGCKG 1 cut(s) 486
MspCI CTTAAG 1 cut(s) 626
MspI CCGG 2 cut(s) 59, 258
MspR9I CCNGG 2 cut(s) 47, 211
Mva1269I GAATGC 2 cut(s) 328, 441
MvaI CCWGG 2 cut(s) 47, 211
MvnI CGCG 1 cut(s) 486
MwoI GCNNNNNNNGC 3 cut(s) 11, 359, 802
NdeI CATATG 2 cut(s) 334, 903
NdeII GATC 2 cut(s) 774, 918
NlaIII CATG 2 cut(s) 301, 638
NlaIV GGNNCC 2 cut(s) 207, 318
NmeAIII GCCGAG 1 cut(s) 208
NmuCI GTSAC 1 cut(s) 217
NspI RCATGY 2 cut(s) 301, 638
OliI CACNNNNGTG 2 cut(s) 230, 607
PasI CCCWGGG 1 cut(s) 210
PciI ACATGT 2 cut(s) 297, 634
PciSI GCTCTTC 1 cut(s) 360
PctI GAATGC 2 cut(s) 328, 441
PfeI GAWTC 1 cut(s) 971
PkrI GCNGC 6 cut(s) 54, 57, 181, 364, 441, 485
PleI GAGTC 2 cut(s) 704, 716
PpsI GAGTC 2 cut(s) 704, 716
PscI ACATGT 2 cut(s) 297, 634
Psp124BI GAGCTC 2 cut(s) 734, 798
Psp6I CCWGG 2 cut(s) 45, 209
PspGI CCWGG 2 cut(s) 45, 209
PspN4I GGNNCC 2 cut(s) 207, 318
PspPI GGNCC 1 cut(s) 267
RsaI GTAC 4 cut(s) 78, 242, 410, 948
RsaNI GTAC 4 cut(s) 77, 241, 409, 947
RseI CAYNNNNRTG 2 cut(s) 230, 607
SacI GAGCTC 2 cut(s) 734, 798
SacII CCGCGG 1 cut(s) 487
SapI GCTCTTC 1 cut(s) 360
SaqAI TTAA 4 cut(s) 291, 591, 627, 801
SatI GCNGC 6 cut(s) 53, 56, 180, 363, 440, 484
Sau3AI GATC 2 cut(s) 774, 918
Sau96I GGNCC 1 cut(s) 267
ScaI AGTACT 2 cut(s) 78, 242
SchI GAGTC 2 cut(s) 705, 716
ScrFI CCNGG 2 cut(s) 47, 211
SduI GDGCHC 2 cut(s) 734, 798
SfaNI GCATC 1 cut(s) 871
Sfr303I CCGCGG 1 cut(s) 487
SgrBI CCGCGG 1 cut(s) 487
SinI GGWCC 1 cut(s) 267
SmiMI CAYNNNNRTG 2 cut(s) 230, 607
SmlI CTYRAG 2 cut(s) 371, 626
SmoI CTYRAG 2 cut(s) 371, 626
Sse9I AATT 2 cut(s) 385, 976
SsiI CCGC 7 cut(s) 5, 56, 179, 484, 486, 710, 1013
SstI GAGCTC 2 cut(s) 734, 798
StyD4I CCNGG 2 cut(s) 45, 209
StyI CCWWGG 1 cut(s) 270
TaaI ACNGT 1 cut(s) 944
TaiI ACGT 1 cut(s) 414
TaqI TCGA 1 cut(s) 26
TasI AATT 2 cut(s) 385, 976
TatI WGTACW 3 cut(s) 76, 240, 946
TauI GCSGC 3 cut(s) 58, 182, 486
TfiI GAWTC 1 cut(s) 971
Tru1I TTAA 4 cut(s) 291, 591, 627, 801
Tru9I TTAA 4 cut(s) 291, 591, 627, 801
TscAI CASTG 5 cut(s) 226, 232, 609, 732, 949
TseFI GTSAC 1 cut(s) 217
TseI GCWGC 3 cut(s) 52, 362, 439
Tsp45I GTSAC 1 cut(s) 217
TspDTI ATGAA 3 cut(s) 656, 768, 970
TspRI CASTG 5 cut(s) 226, 232, 609, 732, 949
Vha464I CTTAAG 1 cut(s) 626
VpaK11BI GGWCC 1 cut(s) 267
XceI RCATGY 2 cut(s) 301, 638
ZrmI AGTACT 2 cut(s) 78, 242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.