RLG00000001940

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000101
Physical Location & Seq
Forward (+)
23262199 .. 23263267
1069 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001940

Sequence Viewer

Length: 951 bp
ATGGCGAATTCCGGCATGCCTGACGAAGCCAAAGAGCTCCTTAAGCCTCGCTCTGAGTTGGCCGTGCTGCCTGTCGTGGCCGTCTTCACCATTGTCATTCGGTGCTATGCCTATGCCGGAAAGACCAAGGCTGCTCTCAAGAAGTACTTTTTGGAAATGTTGGATAAGGGGATGAAGCCCCATTCTGCCTCCTACACGACTGTGTTCGACGCCATTGCCTGCTGGGAGTCAGTGGAGAAGGCGAGGGAGTTCCTTGAGCAGATACAAGCAAAGGGGTTTGTCCCTGAGTCCAAAATTTTTCAGTTTGAAGAAACCCACCTTGCAGAAGCAATGAAGGGAATGAAGATGTATGATGATCTTGTCAACAATACCACCACCAAGAATGTGCAAAAAGTATTCCGCATGTGGCGCACCAAGCCGGGTTGCCTTTACAAAAAGTCGTTGAAGATGTACAACGCTTTGATTGAGGATGGCAGTGCAGACCAGGCCATGGAGCTTTATAAGCACGTTGTTGAGATGGGTATACAGCCCATGGTTGTAGTCCACACCTCCGTTATTGAAGCCTATCTCAAGTTTGGCAAGACCAAGGGTGCTCTGGGGGTGTACTGGGACATGTTAGCTGCTGGGGTTGCCCCAAACTCCTACACTTACACTGTTTTAATCAAGGGACTCACTGCTGACCCGAACTTCTCTGGAGATGCCAAGAAATGCTTGCTTGAGATGATGGACAAGGGGATGAGGCCTAATGCTGCTACCTACACTGCTGTGATAGAGAGCTTTGCAAAGCAAGAGGACGAGGCATCTGAGAAGGAGTGCAAAGAGTTGGTGGAGGTGATGATGGGTAAGGGGTTTGTGCCAAACGCAAAGGCTATGATGGAGGTTCTAAAGGGAAGGCCAACACCAGTAATAAGAAGGGTCATGAACATTGTTCTCTCCAAGTTGAAGGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

317

Amino Acids

35.34

Weight (kDa)

8.92

Isoelectric Point (pI)

31.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 24 - 72 1e-05 PPR repeat family
TPR_24 PF23276 158 - 265 3.2e-08 Fungal tetratrico peptide repeats
PPR_3 PF13812 168 - 222 6.7e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 178 - 224 1.2e-11 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 501
AccB7I CCANNNNNTGG 1 cut(s) 490
AccI GTMKAC 1 cut(s) 523
AciI CCGC 1 cut(s) 400
AcoI YGGCCR 2 cut(s) 60, 78
AcsI RAATTY 2 cut(s) 7, 294
AcyI GRCGYC 1 cut(s) 210
AfaI GTAC 3 cut(s) 146, 452, 605
AfiI CCNNNNNNNGG 1 cut(s) 490
AflII CTTAAG 1 cut(s) 41
AflIII ACRYGT 1 cut(s) 612
AgsI TTSAA 4 cut(s) 308, 445, 560, 943
AjnI CCWGG 1 cut(s) 483
AjuI GAANNNNNNNTTGG 2 cut(s) 134, 166
AleI CACNNNNGTG 2 cut(s) 200, 764
AluBI AGCT 4 cut(s) 37, 496, 620, 777
AluI AGCT 4 cut(s) 37, 496, 620, 777
Alw21I GWGCWC 2 cut(s) 39, 595
AoxI GGCC 5 cut(s) 60, 78, 486, 740, 893
ApeKI GCWGC 4 cut(s) 67, 131, 620, 749
ApoI RAATTY 2 cut(s) 7, 294
AspLEI GCGC 1 cut(s) 411
AsuC2I CCSGG 1 cut(s) 420
AsuHPI GGTGA 2 cut(s) 79, 844
BanII GRGCYC 1 cut(s) 39
BbsI GAAGAC 1 cut(s) 76
Bbv12I GWGCWC 2 cut(s) 39, 595
BbvI GCAGC 4 cut(s) 54, 118, 607, 736
BccI CCATC 5 cut(s) 464, 511, 718, 832, 868
BceAI ACGGC 2 cut(s) 47, 65
BcgI CGANNNNNNTGC 2 cut(s) 197, 231
BciT130I CCWGG 1 cut(s) 485
BcnI CCSGG 1 cut(s) 420
BfrI CTTAAG 1 cut(s) 41
BisI GCNGC 4 cut(s) 68, 132, 621, 750
BlsI GCNGC 4 cut(s) 69, 133, 622, 751
BmcAI AGTACT 1 cut(s) 146
Bme1390I CCNGG 2 cut(s) 420, 485
BmrFI CCNGG 2 cut(s) 420, 485
BmrI ACTGGG 1 cut(s) 616
BmsI GCATC 2 cut(s) 688, 809
BmuI ACTGGG 1 cut(s) 616
BpiI GAAGAC 1 cut(s) 76
BpmI CTGGAG 1 cut(s) 714
BpuEI CTTGAG 4 cut(s) 122, 275, 554, 737
BpuMI CCSGG 1 cut(s) 420
BsaHI GRCGYC 1 cut(s) 210
BsaJI CCNNGG 4 cut(s) 126, 489, 531, 585
Bsc4I CCNNNNNNNGG 1 cut(s) 490
Bse1I ACTGG 2 cut(s) 611, 902
Bse3DI GCAATG 2 cut(s) 213, 336
BseBI CCWGG 1 cut(s) 485
BseDI CCNNGG 4 cut(s) 126, 489, 531, 585
BseGI GGATG 3 cut(s) 177, 475, 741
BseLI CCNNNNNNNGG 1 cut(s) 490
BseMI GCAATG 2 cut(s) 213, 336
BseMII CTCAG 3 cut(s) 45, 276, 795
BseNI ACTGG 2 cut(s) 611, 902
BseXI GCAGC 4 cut(s) 54, 118, 607, 736
BseYI CCCAGC 2 cut(s) 222, 623
BsgI GTGCAG 1 cut(s) 498
BshFI GGCC 5 cut(s) 62, 80, 488, 742, 895
BsiHKAI GWGCWC 2 cut(s) 39, 595
BsiSI CCGG 3 cut(s) 12, 117, 419
BslFI GGGAC 3 cut(s) 266, 623, 681
BslI CCNNNNNNNGG 1 cut(s) 490
BsmFI GGGAC 3 cut(s) 266, 623, 681
BsnI GGCC 5 cut(s) 62, 80, 488, 742, 895
Bsp1286I GDGCHC 2 cut(s) 39, 595
Bsp1407I TGTACA 1 cut(s) 450
Bsp143I GATC 1 cut(s) 355
Bsp19I CCATGG 2 cut(s) 489, 531
BspACI CCGC 1 cut(s) 400
BspANI GGCC 5 cut(s) 62, 80, 488, 742, 895
BspCNI CTCAG 3 cut(s) 46, 277, 796
BspHI TCATGA 1 cut(s) 918
BspTI CTTAAG 1 cut(s) 41
BsrDI GCAATG 2 cut(s) 213, 336
BsrGI TGTACA 1 cut(s) 450
BsrI ACTGG 2 cut(s) 611, 902
BssECI CCNNGG 4 cut(s) 126, 489, 531, 585
BssMI GATC 1 cut(s) 355
BssNAI GTATAC 1 cut(s) 524
BssNI GRCGYC 1 cut(s) 210
BssT1I CCWWGG 4 cut(s) 126, 489, 531, 585
Bst1107I GTATAC 1 cut(s) 524
Bst2UI CCWGG 1 cut(s) 485
Bst4CI ACNGT 2 cut(s) 202, 655
BstACI GRCGYC 1 cut(s) 210
BstAFI CTTAAG 1 cut(s) 41
BstAUI TGTACA 1 cut(s) 450
BstC8I GCNNGC 3 cut(s) 17, 220, 713
BstDEI CTNAG 3 cut(s) 54, 285, 804
BstDSI CCRYGG 2 cut(s) 489, 531
BstF5I GGATG 3 cut(s) 177, 475, 741
BstHHI GCGC 1 cut(s) 411
BstKTI GATC 1 cut(s) 358
BstMBI GATC 1 cut(s) 355
BstMWI GCNNNNNNNGC 6 cut(s) 43, 408, 415, 485, 502, 629
BstNI CCWGG 1 cut(s) 485
BstNSI RCATGY 3 cut(s) 19, 406, 616
BstSCI CCNGG 2 cut(s) 418, 483
BstV1I GCAGC 4 cut(s) 54, 118, 607, 736
BstV2I GAAGAC 1 cut(s) 76
BstZ17I GTATAC 1 cut(s) 524
BsuRI GGCC 5 cut(s) 62, 80, 488, 742, 895
BtgI CCRYGG 2 cut(s) 489, 531
BtsCI GGATG 3 cut(s) 177, 475, 741
BtsI GCAGTG 3 cut(s) 481, 672, 759
BtsIMutI CAGTG 5 cut(s) 237, 481, 651, 672, 759
Cac8I GCNNGC 3 cut(s) 17, 220, 713
CciI TCATGA 1 cut(s) 918
CfoI GCGC 1 cut(s) 411
CseI GACGC 1 cut(s) 218
Csp6I GTAC 3 cut(s) 145, 451, 604
CviAII CATG 6 cut(s) 16, 403, 490, 532, 613, 919
CviQI GTAC 3 cut(s) 145, 451, 604
DdeI CTNAG 3 cut(s) 54, 285, 804
DpnI GATC 1 cut(s) 357
DpnII GATC 1 cut(s) 355
EaeI YGGCCR 2 cut(s) 60, 78
Ecl136II GAGCTC 1 cut(s) 37
Eco130I CCWWGG 4 cut(s) 126, 489, 531, 585
Eco147I AGGCCT 1 cut(s) 742
Eco24I GRGCYC 1 cut(s) 39
Eco53kI GAGCTC 1 cut(s) 37
EcoICRI GAGCTC 1 cut(s) 37
EcoRI GAATTC 1 cut(s) 7
EcoRII CCWGG 1 cut(s) 483
EcoT14I CCWWGG 4 cut(s) 126, 489, 531, 585
EcoT38I GRGCYC 1 cut(s) 39
ErhI CCWWGG 4 cut(s) 126, 489, 531, 585
FaeI CATG 6 cut(s) 19, 406, 493, 535, 616, 922
FalI AAGNNNNNCTT 6 cut(s) 24, 56, 131, 163, 695, 727
FaqI GGGAC 3 cut(s) 266, 623, 681
FatI CATG 6 cut(s) 15, 402, 489, 531, 612, 918
FblI GTMKAC 1 cut(s) 523
Fnu4HI GCNGC 4 cut(s) 68, 132, 621, 750
FokI GGATG 3 cut(s) 184, 482, 748
FriOI GRGCYC 1 cut(s) 39
Fsp4HI GCNGC 4 cut(s) 68, 132, 621, 750
GlaI GCGC 1 cut(s) 410
GluI GCNGC 4 cut(s) 68, 132, 621, 750
GsaI CCCAGC 2 cut(s) 226, 627
GsuI CTGGAG 1 cut(s) 714
HaeIII GGCC 5 cut(s) 62, 80, 488, 742, 895
HapII CCGG 3 cut(s) 12, 117, 419
HgaI GACGC 1 cut(s) 218
HhaI GCGC 1 cut(s) 411
Hin1I GRCGYC 1 cut(s) 210
Hin1II CATG 6 cut(s) 19, 406, 493, 535, 616, 922
Hin6I GCGC 1 cut(s) 409
HinP1I GCGC 1 cut(s) 409
HincII GTYRAC 1 cut(s) 364
HindII GTYRAC 1 cut(s) 364
HinfI GANTC 3 cut(s) 227, 287, 669
HpaII CCGG 3 cut(s) 12, 117, 419
HphI GGTGA 2 cut(s) 79, 844
Hpy166II GTNNAC 4 cut(s) 364, 524, 544, 604
Hpy188I TCNGA 2 cut(s) 55, 805
Hpy188III TCNNGA 3 cut(s) 139, 693, 919
Hpy8I GTNNAC 4 cut(s) 364, 524, 544, 604
Hpy99I CGWCG 1 cut(s) 212
HpyAV CCTTC 6 cut(s) 232, 328, 802, 885, 906, 937
HpyCH4III ACNGT 2 cut(s) 202, 655
HpyCH4IV ACGT 1 cut(s) 507
HpyCH4V TGCA 5 cut(s) 323, 388, 479, 782, 816
HpyF10VI GCNNNNNNNGC 6 cut(s) 43, 408, 415, 485, 502, 629
HpyF3I CTNAG 3 cut(s) 54, 285, 804
HpySE526I ACGT 1 cut(s) 507
Hsp92I GRCGYC 1 cut(s) 210
Hsp92II CATG 6 cut(s) 19, 406, 493, 535, 616, 922
HspAI GCGC 1 cut(s) 409
Kzo9I GATC 1 cut(s) 355
LmnI GCTCC 2 cut(s) 42, 493
Lsp1109I GCAGC 4 cut(s) 54, 118, 607, 736
LweI GCATC 2 cut(s) 688, 809
MaeII ACGT 1 cut(s) 507
MalI GATC 1 cut(s) 357
MboI GATC 1 cut(s) 355
MboII GAAGA 4 cut(s) 76, 320, 355, 457
MhlI GDGCHC 2 cut(s) 39, 595
MluCI AATT 2 cut(s) 7, 294
MlyI GAGTC 3 cut(s) 236, 296, 663
MmeI TCCRAC 1 cut(s) 141
MseI TTAA 2 cut(s) 42, 659
MslI CAYNNNNRTG 2 cut(s) 200, 764
MspCI CTTAAG 1 cut(s) 41
MspI CCGG 3 cut(s) 12, 117, 419
MspR9I CCNGG 2 cut(s) 420, 485
MvaI CCWGG 1 cut(s) 485
MwoI GCNNNNNNNGC 6 cut(s) 43, 408, 415, 485, 502, 629
NciI CCSGG 1 cut(s) 420
NcoI CCATGG 2 cut(s) 489, 531
NdeII GATC 1 cut(s) 355
NlaIII CATG 6 cut(s) 19, 406, 493, 535, 616, 922
NspI RCATGY 3 cut(s) 19, 406, 616
OliI CACNNNNGTG 2 cut(s) 200, 764
PaeI GCATGC 1 cut(s) 19
PagI TCATGA 1 cut(s) 918
PceI AGGCCT 1 cut(s) 742
PciI ACATGT 1 cut(s) 612
PflMI CCANNNNNTGG 1 cut(s) 490
PkrI GCNGC 4 cut(s) 69, 133, 622, 751
PleI GAGTC 3 cut(s) 235, 295, 663
PpsI GAGTC 3 cut(s) 235, 295, 663
PscI ACATGT 1 cut(s) 612
PsiI TTATAA 1 cut(s) 501
Psp124BI GAGCTC 1 cut(s) 39
Psp6I CCWGG 1 cut(s) 483
PspFI CCCAGC 2 cut(s) 222, 623
PspGI CCWGG 1 cut(s) 483
RsaI GTAC 3 cut(s) 146, 452, 605
RsaNI GTAC 3 cut(s) 145, 451, 604
RseI CAYNNNNRTG 2 cut(s) 200, 764
SacI GAGCTC 1 cut(s) 39
SaqAI TTAA 2 cut(s) 42, 659
SatI GCNGC 4 cut(s) 68, 132, 621, 750
Sau3AI GATC 1 cut(s) 355
ScaI AGTACT 1 cut(s) 146
SchI GAGTC 3 cut(s) 236, 296, 663
ScrFI CCNGG 2 cut(s) 420, 485
SduI GDGCHC 2 cut(s) 39, 595
SfaNI GCATC 2 cut(s) 688, 809
SmiMI CAYNNNNRTG 2 cut(s) 200, 764
SmlI CTYRAG 5 cut(s) 41, 137, 254, 569, 716
SmoI CTYRAG 5 cut(s) 41, 137, 254, 569, 716
SphI GCATGC 1 cut(s) 19
Sse9I AATT 2 cut(s) 7, 294
SseBI AGGCCT 1 cut(s) 742
SsiI CCGC 1 cut(s) 400
SstI GAGCTC 1 cut(s) 39
StuI AGGCCT 1 cut(s) 742
StyD4I CCNGG 2 cut(s) 418, 483
StyI CCWWGG 4 cut(s) 126, 489, 531, 585
TaaI ACNGT 2 cut(s) 202, 655
TaiI ACGT 1 cut(s) 510
TaqI TCGA 1 cut(s) 207
TasI AATT 2 cut(s) 7, 294
TatI WGTACW 3 cut(s) 144, 450, 603
Tru1I TTAA 2 cut(s) 42, 659
Tru9I TTAA 2 cut(s) 42, 659
TscAI CASTG 5 cut(s) 237, 481, 658, 679, 766
TseI GCWGC 4 cut(s) 67, 131, 620, 749
TspDTI ATGAA 4 cut(s) 188, 347, 356, 935
TspGWI ACGGA 1 cut(s) 541
TspRI CASTG 5 cut(s) 237, 481, 658, 679, 766
Van91I CCANNNNNTGG 1 cut(s) 490
Vha464I CTTAAG 1 cut(s) 41
XapI RAATTY 2 cut(s) 7, 294
XceI RCATGY 3 cut(s) 19, 406, 616
XcmI CCANNNNNNNNNTGG 1 cut(s) 592
XmiI GTMKAC 1 cut(s) 523
ZrmI AGTACT 1 cut(s) 146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.