Rorug07G0293700

Golgi vesicle prefusion complex stabilization

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000101
Physical Location & Seq
Forward (+)
28714848 .. 28716984
2137 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0293700.1

Sequence Viewer

Length: 936 bp
ATGGCGGGGTACAATGGCAGATCAGAATATATGCAACTCTTCCGTCCCGAACTGCACCTCCAGAGACCACCGTCACCGTCCATCTCTGTTCCGCCGCAGCAACAACAACCTCAACCTTCTTCCGATTCTCAACAGCAAGAAGACTCGCCCGAAGGAGACCAAGAACACAAGATCGAGTCCGACACCGCCGCTACAAGTTCCGGAGGCGGCGGCGGCGGTAGCGGTAGCGGTGGGGGTTCAGGACGTCGTCCGCGGGGGCGTCCGGCGGGGTCAAAGAACAAGCCGAAGCCGCCGATCATCGTGACGCGCGACAGCCCCAACGCGCTCCGCTCGCACGTGCTGGAGGTCTCTGCCGGGACAGACGTGGTGGAGAGCGTGTCCCACTACGCGAGGCGGAGGGGGAGGGGAGTGTGCGTGCTCAGCGGCACCGGCACCGTCGCTAACGTCACCCTGCGTCAGCCGGCGGCGCCCGTGGGGAGCGTGGTCACTCTCCACGGGAGGTTCGAGATACTTTCGCTCTCGGGGACGGTGCTTCCGCCTCCGGCCCCGCCGGGCGCCGGGGGACTGTCGATTTTCCTGGCGGGCGGGCAGGGTCAGGTGGTTGGGGGCAGCGTGGTGGGCCCACTGCTGGCTTCGGGGCCGGTTGTTTTGATGGCTGCGTCGTTTGCGAATGCGGTGTTTGAGAGGCTGCCATTGGAGGAGGAAGAGGCAGCGGGCGGTGGTGGGTTACAAGTCCAGCAACCGACGGCTTCACAATCTTCAGGAGTGACAGGTGGTGGTGGTGGAGGACAACATCAGCAGCTTGGTGAGGGAAGCAGCGGCGGTCTCTTTAATCTGGGAGGGAACATGGGGGCGGGGAGCTATCCGGCGTTTTCGGGAACTGATTTGTACGGGTGGGGTAGCGGTGGAGCTACTCATCCGCGGCCTCCGTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

311

Amino Acids

31.22

Weight (kDa)

6.66

Isoelectric Point (pI)

72.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PCC PF03479 110 - 223 4.9e-23 Plants and Prokaryotes Conserved (PCC) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 247
AccB1I GGYRCC 4 cut(s) 425, 431, 466, 554
AccBSI CCGCTC 1 cut(s) 330
AccII CGCG 6 cut(s) 253, 307, 309, 323, 389, 922
AccIII TCCGGA 1 cut(s) 200
AcuI CTGAAG 1 cut(s) 744
AcvI CACGTG 1 cut(s) 337
AcyI GRCGYC 4 cut(s) 244, 259, 467, 555
AfaI GTAC 2 cut(s) 11, 890
AfiI CCNNNNNNNGG 2 cut(s) 557, 628
AjiI CACGTC 1 cut(s) 364
AjnI CCWGG 1 cut(s) 576
AloI GAACNNNNNNTCC 2 cut(s) 42, 74
AluBI AGCT 3 cut(s) 802, 861, 911
AluI AGCT 3 cut(s) 802, 861, 911
Alw21I GWGCWC 1 cut(s) 420
Alw26I GTCTC 4 cut(s) 58, 150, 352, 830
Ama87I CYCGRG 1 cut(s) 520
Aor13HI TCCGGA 1 cut(s) 200
AoxI GGCC 4 cut(s) 543, 619, 638, 923
ApaI GGGCCC 1 cut(s) 623
ApeKI GCWGC 7 cut(s) 97, 609, 656, 688, 710, 799, 816
AspLEI GCGC 4 cut(s) 309, 325, 469, 557
AspS9I GGNCC 4 cut(s) 544, 619, 620, 638
AsuC2I CCSGG 3 cut(s) 355, 552, 559
AsuHPI GGTGA 3 cut(s) 66, 439, 818
AvaI CYCGRG 1 cut(s) 520
BaeGI GKGCMC 1 cut(s) 623
BanI GGYRCC 4 cut(s) 425, 431, 466, 554
BanII GRGCYC 1 cut(s) 623
BbrPI CACGTG 1 cut(s) 337
BbsI GAAGAC 1 cut(s) 147
Bbv12I GWGCWC 1 cut(s) 420
BbvI GCAGC 7 cut(s) 109, 621, 643, 675, 722, 811, 828
BccI CCATC 2 cut(s) 89, 646
BceAI ACGGC 1 cut(s) 762
BciT130I CCWGG 1 cut(s) 578
BcnI CCSGG 3 cut(s) 355, 552, 559
BcoDI GTCTC 4 cut(s) 58, 150, 352, 830
BfoI RGCGCY 2 cut(s) 470, 558
BlpI GCTNAGC 1 cut(s) 419
Bme1390I CCNGG 4 cut(s) 355, 552, 559, 578
BmeT110I CYCGRG 1 cut(s) 520
BmgBI CACGTC 1 cut(s) 364
BmgT120I GGNCC 4 cut(s) 544, 619, 620, 638
BmiI GGNNCC 7 cut(s) 427, 433, 468, 546, 556, 621, 639
BmrFI CCNGG 4 cut(s) 355, 552, 559, 578
BoxI GACNNNNGTC 1 cut(s) 70
BpiI GAAGAC 1 cut(s) 147
BpmI CTGGAG 2 cut(s) 44, 362
Bpu1102I GCTNAGC 1 cut(s) 419
BpuMI CCSGG 3 cut(s) 355, 552, 559
BsaAI YACGTR 1 cut(s) 337
BsaHI GRCGYC 4 cut(s) 244, 259, 467, 555
BsaI GGTCTC 4 cut(s) 58, 150, 352, 830
BsaJI CCNNGG 5 cut(s) 251, 471, 493, 558, 920
BsaWI WCCGGW 1 cut(s) 200
BsaXI ACNNNNNCTCC 6 cut(s) 42, 72, 362, 392, 399, 429
Bsc4I CCNNNNNNNGG 2 cut(s) 557, 628
Bse118I RCCGGY 3 cut(s) 428, 460, 640
BseAI TCCGGA 1 cut(s) 200
BseBI CCWGG 1 cut(s) 578
BseDI CCNNGG 5 cut(s) 251, 471, 493, 558, 920
BseGI GGATG 1 cut(s) 916
BseLI CCNNNNNNNGG 2 cut(s) 557, 628
BseMII CTCAG 1 cut(s) 433
BseRI GAGGAG 1 cut(s) 713
BseSI GKGCMC 1 cut(s) 623
BseXI GCAGC 7 cut(s) 109, 621, 643, 675, 722, 811, 828
BsgI GTGCAG 1 cut(s) 38
Bsh1236I CGCG 6 cut(s) 253, 307, 309, 323, 389, 922
BshFI GGCC 4 cut(s) 545, 621, 640, 925
BshNI GGYRCC 4 cut(s) 425, 431, 466, 554
BsiHKAI GWGCWC 1 cut(s) 420
BsiHKCI CYCGRG 1 cut(s) 520
BslFI GGGAC 5 cut(s) 30, 364, 370, 538, 576
BslI CCNNNNNNNGG 2 cut(s) 557, 628
BsmAI GTCTC 4 cut(s) 58, 150, 352, 830
BsmFI GGGAC 5 cut(s) 30, 364, 370, 538, 576
BsmI GAATGC 1 cut(s) 676
BsnI GGCC 4 cut(s) 545, 621, 640, 925
Bso31I GGTCTC 4 cut(s) 58, 150, 352, 830
BsoBI CYCGRG 1 cut(s) 520
Bsp120I GGGCCC 1 cut(s) 619
Bsp1286I GDGCHC 2 cut(s) 420, 623
Bsp13I TCCGGA 1 cut(s) 200
Bsp143I GATC 3 cut(s) 20, 171, 294
Bsp1720I GCTNAGC 1 cut(s) 419
BspANI GGCC 4 cut(s) 545, 621, 640, 925
BspCNI CTCAG 1 cut(s) 432
BspEI TCCGGA 1 cut(s) 200
BspFNI CGCG 6 cut(s) 253, 307, 309, 323, 389, 922
BspLI GGNNCC 7 cut(s) 427, 433, 468, 546, 556, 621, 639
BspT107I GGYRCC 4 cut(s) 425, 431, 466, 554
BspTNI GGTCTC 4 cut(s) 58, 150, 352, 830
BsrBI CCGCTC 1 cut(s) 330
BsrFI RCCGGY 3 cut(s) 428, 460, 640
BssAI RCCGGY 3 cut(s) 428, 460, 640
BssECI CCNNGG 5 cut(s) 251, 471, 493, 558, 920
BssMI GATC 3 cut(s) 20, 171, 294
BssNI GRCGYC 4 cut(s) 244, 259, 467, 555
Bst2UI CCWGG 1 cut(s) 578
Bst4CI ACNGT 5 cut(s) 72, 78, 436, 529, 567
Bst6I CTCTTC 2 cut(s) 44, 699
BstACI GRCGYC 4 cut(s) 244, 259, 467, 555
BstBAI YACGTR 1 cut(s) 337
BstC8I GCNNGC 7 cut(s) 332, 416, 462, 583, 587, 630, 715
BstDEI CTNAG 1 cut(s) 419
BstDSI CCRYGG 4 cut(s) 251, 471, 493, 920
BstF5I GGATG 1 cut(s) 916
BstFNI CGCG 6 cut(s) 253, 307, 309, 323, 389, 922
BstH2I RGCGCY 2 cut(s) 470, 558
BstHHI GCGC 4 cut(s) 309, 325, 469, 557
BstKTI GATC 3 cut(s) 23, 174, 297
BstMAI GTCTC 4 cut(s) 58, 150, 352, 830
BstMBI GATC 3 cut(s) 20, 171, 294
BstMWI GCNNNNNNNGC 9 cut(s) 213, 219, 289, 331, 420, 429, 466, 618, 665
BstNI CCWGG 1 cut(s) 578
BstPAI GACNNNNGTC 1 cut(s) 70
BstSCI CCNGG 4 cut(s) 353, 550, 557, 576
BstSLI GKGCMC 1 cut(s) 623
BstUI CGCG 6 cut(s) 253, 307, 309, 323, 389, 922
BstV1I GCAGC 7 cut(s) 109, 621, 643, 675, 722, 811, 828
BstV2I GAAGAC 1 cut(s) 147
BsuRI GGCC 4 cut(s) 545, 621, 640, 925
BtgI CCRYGG 4 cut(s) 251, 471, 493, 920
BtrI CACGTC 1 cut(s) 364
BtsCI GGATG 1 cut(s) 916
BtsI GCAGTG 1 cut(s) 623
BtsIMutI CAGTG 1 cut(s) 623
Cac8I GCNNGC 7 cut(s) 332, 416, 462, 583, 587, 630, 715
CfoI GCGC 4 cut(s) 309, 325, 469, 557
Cfr10I RCCGGY 3 cut(s) 428, 460, 640
Cfr13I GGNCC 4 cut(s) 544, 619, 620, 638
Cfr42I CCGCGG 2 cut(s) 254, 923
CseI GACGC 4 cut(s) 248, 313, 443, 648
Csp6I GTAC 2 cut(s) 10, 889
CviAII CATG 1 cut(s) 847
CviQI GTAC 2 cut(s) 10, 889
DdeI CTNAG 1 cut(s) 419
DinI GGCGCC 2 cut(s) 468, 556
DpnI GATC 3 cut(s) 22, 173, 296
DpnII GATC 3 cut(s) 20, 171, 294
Eam1104I CTCTTC 2 cut(s) 44, 699
EarI CTCTTC 2 cut(s) 44, 699
EciI GGCGGA 3 cut(s) 81, 409, 525
Eco24I GRGCYC 1 cut(s) 623
Eco31I GGTCTC 4 cut(s) 58, 150, 352, 830
Eco57I CTGAAG 1 cut(s) 744
Eco72I CACGTG 1 cut(s) 337
Eco88I CYCGRG 1 cut(s) 520
EcoRII CCWGG 1 cut(s) 576
EcoT38I GRGCYC 1 cut(s) 623
EgeI GGCGCC 2 cut(s) 468, 556
EheI GGCGCC 2 cut(s) 468, 556
FaeI CATG 1 cut(s) 850
FaiI YATR 3 cut(s) 30, 32, 848
FaqI GGGAC 5 cut(s) 30, 364, 370, 538, 576
FatI CATG 1 cut(s) 846
FauI CCCGC 7 cut(s) 246, 259, 555, 574, 578, 706, 847
FokI GGATG 1 cut(s) 903
FriOI GRGCYC 1 cut(s) 623
GlaI GCGC 4 cut(s) 308, 324, 468, 556
GsuI CTGGAG 2 cut(s) 44, 362
HaeII RGCGCY 2 cut(s) 470, 558
HaeIII GGCC 4 cut(s) 545, 621, 640, 925
HgaI GACGC 4 cut(s) 248, 313, 443, 648
HhaI GCGC 4 cut(s) 309, 325, 469, 557
Hin1I GRCGYC 4 cut(s) 244, 259, 467, 555
Hin1II CATG 1 cut(s) 850
Hin6I GCGC 4 cut(s) 307, 323, 467, 555
HinP1I GCGC 4 cut(s) 307, 323, 467, 555
HinfI GANTC 3 cut(s) 125, 143, 176
HphI GGTGA 3 cut(s) 66, 439, 818
Hpy188I TCNGA 3 cut(s) 25, 124, 181
Hpy188III TCNNGA 8 cut(s) 47, 61, 201, 240, 301, 505, 762, 876
Hpy99I CGWCG 4 cut(s) 249, 440, 664, 748
HpyAV CCTTC 2 cut(s) 126, 146
HpyCH4III ACNGT 5 cut(s) 72, 78, 436, 529, 567
HpyCH4IV ACGT 4 cut(s) 244, 336, 363, 444
HpyCH4V TGCA 2 cut(s) 34, 55
HpyF10VI GCNNNNNNNGC 9 cut(s) 213, 219, 289, 331, 420, 429, 466, 618, 665
HpyF3I CTNAG 1 cut(s) 419
HpySE526I ACGT 4 cut(s) 244, 336, 363, 444
Hsp92I GRCGYC 4 cut(s) 244, 259, 467, 555
Hsp92II CATG 1 cut(s) 850
HspAI GCGC 4 cut(s) 307, 323, 467, 555
KasI GGCGCC 2 cut(s) 466, 554
Kpn2I TCCGGA 1 cut(s) 200
KroI GCCGGC 1 cut(s) 460
KroNI GCCGGC 1 cut(s) 462
KspI CCGCGG 2 cut(s) 254, 923
Kzo9I GATC 3 cut(s) 20, 171, 294
LmnI GCTCC 4 cut(s) 330, 477, 858, 908
Lsp1109I GCAGC 7 cut(s) 109, 621, 643, 675, 722, 811, 828
MaeII ACGT 4 cut(s) 244, 336, 363, 444
MaeIII GTNAC 6 cut(s) 72, 301, 445, 484, 726, 766
MalI GATC 3 cut(s) 22, 173, 296
MbiI CCGCTC 1 cut(s) 330
MboI GATC 3 cut(s) 20, 171, 294
MboII GAAGA 5 cut(s) 31, 111, 152, 716, 750
MhlI GDGCHC 2 cut(s) 420, 623
Mly113I GGCGCC 2 cut(s) 467, 555
MlyI GAGTC 2 cut(s) 137, 185
MmeI TCCRAC 1 cut(s) 204
MroI TCCGGA 1 cut(s) 200
MroNI GCCGGC 1 cut(s) 460
MseI TTAA 1 cut(s) 831
MspA1I CMGCKG 5 cut(s) 253, 423, 713, 819, 922
MspR9I CCNGG 4 cut(s) 355, 552, 559, 578
Mva1269I GAATGC 1 cut(s) 676
MvaI CCWGG 1 cut(s) 578
MvnI CGCG 6 cut(s) 253, 307, 309, 323, 389, 922
MwoI GCNNNNNNNGC 9 cut(s) 213, 219, 289, 331, 420, 429, 466, 618, 665
NaeI GCCGGC 1 cut(s) 462
NarI GGCGCC 2 cut(s) 467, 555
NciI CCSGG 3 cut(s) 355, 552, 559
NdeII GATC 3 cut(s) 20, 171, 294
NgoMIV GCCGGC 1 cut(s) 460
NlaIII CATG 1 cut(s) 850
NlaIV GGNNCC 7 cut(s) 427, 433, 468, 546, 556, 621, 639
NmuCI GTSAC 5 cut(s) 72, 301, 445, 484, 766
PcsI WCGNNNNNNNCGW 2 cut(s) 306, 501
PctI GAATGC 1 cut(s) 676
PdiI GCCGGC 1 cut(s) 462
PfeI GAWTC 1 cut(s) 125
PflFI GACNNNGTC 1 cut(s) 246
PleI GAGTC 2 cut(s) 137, 184
PluTI GGCGCC 2 cut(s) 470, 558
PmaCI CACGTG 1 cut(s) 337
PmlI CACGTG 1 cut(s) 337
PpsI GAGTC 2 cut(s) 137, 184
Ppu21I YACGTR 1 cut(s) 337
PshAI GACNNNNGTC 1 cut(s) 70
Psp6I CCWGG 1 cut(s) 576
PspCI CACGTG 1 cut(s) 337
PspGI CCWGG 1 cut(s) 576
PspN4I GGNNCC 7 cut(s) 427, 433, 468, 546, 556, 621, 639
PspOMI GGGCCC 1 cut(s) 619
PspPI GGNCC 4 cut(s) 544, 619, 620, 638
PsyI GACNNNGTC 1 cut(s) 246
RsaI GTAC 2 cut(s) 11, 890
RsaNI GTAC 2 cut(s) 10, 889
SacII CCGCGG 2 cut(s) 254, 923
SaqAI TTAA 1 cut(s) 831
Sau3AI GATC 3 cut(s) 20, 171, 294
Sau96I GGNCC 4 cut(s) 544, 619, 620, 638
SchI GAGTC 2 cut(s) 137, 185
ScrFI CCNGG 4 cut(s) 355, 552, 559, 578
SduI GDGCHC 2 cut(s) 420, 623
SfoI GGCGCC 2 cut(s) 468, 556
Sfr303I CCGCGG 2 cut(s) 254, 923
SgrBI CCGCGG 2 cut(s) 254, 923
SspDI GGCGCC 2 cut(s) 466, 554
StyD4I CCNGG 4 cut(s) 353, 550, 557, 576
TaaI ACNGT 5 cut(s) 72, 78, 436, 529, 567
TaiI ACGT 4 cut(s) 247, 339, 366, 447
TaqI TCGA 3 cut(s) 174, 504, 569
TfiI GAWTC 1 cut(s) 125
Tru1I TTAA 1 cut(s) 831
Tru9I TTAA 1 cut(s) 831
TscAI CASTG 1 cut(s) 630
TseFI GTSAC 5 cut(s) 72, 301, 445, 484, 766
TseI GCWGC 7 cut(s) 97, 609, 656, 688, 710, 799, 816
Tsp45I GTSAC 5 cut(s) 72, 301, 445, 484, 766
TspGWI ACGGA 2 cut(s) 32, 918
TspRI CASTG 1 cut(s) 630
Tth111I GACNNNGTC 1 cut(s) 246
ZraI GACGTC 1 cut(s) 245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.