RLG00000001112

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000101
Physical Location & Seq
Reverse (-)
10452134 .. 10453105
972 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001112

Sequence Viewer

Length: 972 bp
ATGGTGATTATGGCCTATGCCGGCAATGGCAAGACCAAGGATGCTCACAAGGTCTACCAGCAGATGATAGCCTCTGGTGTCACCCCCACCACCTACACTTACACAGTACTCATCTGTGGATTTGCAAAAGATTTTTCTGATTCTAGTTTTGTTGGGTATGCCAAGAAGTATTTCCTTGAAATGTTGGATAGGGGGATGAAGCCCCAATATCAACCCTACATGTATGTTATGGACGCCATTGCCTACCGAGAGCCAGTGGAGGAGGTCAAGAAGTTCCTTGAGCAGATAAAAGCTAAGGGGTTCATCCCTGACATCGATGGTTTTCAATACAAAGACGACCACCTCACAGAAGCACTGCAGGAAATGAAAACGTATGTTGATCATGTCAACAAGAACATCACTGACAAGGCTGTTCAAAAATTGTTCCGCGAGTCACGCACCTGCCCCTGGATAGAACAGTCGATGGAGATGCACAAGGCTTTGGTAGAGGATGGAAATGGGCATGAGGCCATCGAGTTCTATCATACCATTCAACAGACAGGCGTAGAGCCATTGGTCCAAATCCACACCTCTGATATGAAAGCCTACCTCAAGTTGGGCAAGACCAAGGGTGCTCTGGAGGCGTATCTGGTCATGTTAGCTGCTGGGGTCGCCCCCAACTCCTACACTTACACTGTTTTAATCAAGGGACTCAGTGCTGACCCGGACTTCTTTGGAGATGCCAAGAAGTACTTGCTTGAGATGATGGACAAGGGGAAGCAGCCTAATGTTGCTACCTATACTGCGGTGATAGAAGGCTTTGTGCTTTGGGAGGAAACGACAGCTGAAGAGAAGGGCAAAGAGTTTGTGGAGGTGATGATGGGTAAGGGTTTTGTGCCTAATGCGAAGGCTATGATGAAGGTTTTAAAAGGCAGACCAAAACTGGTAATTAGAAGGGTCATGAACATTGTACTTTCCAAGTTGAAGAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

324

Amino Acids

36.63

Weight (kDa)

8.2

Isoelectric Point (pI)

31.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 2 - 43 5e-11 PPR repeat family
PPR_2 PF13041 193 - 231 5.1e-09 PPR repeat family
TPR_24 PF23276 193 - 270 2.3e-06 Fungal tetratrico peptide repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 449
Acc36I ACCTGC 1 cut(s) 449
AccI GTMKAC 1 cut(s) 54
AccII CGCG 1 cut(s) 429
AciI CCGC 2 cut(s) 427, 785
AcuI CTGAAG 1 cut(s) 846
AcyI GRCGYC 1 cut(s) 234
AfaI GTAC 3 cut(s) 108, 731, 951
AfiI CCNNNNNNNGG 2 cut(s) 447, 595
AflIII ACRYGT 1 cut(s) 219
AgsI TTSAA 5 cut(s) 179, 326, 416, 533, 964
AjnI CCWGG 1 cut(s) 446
AjuI GAANNNNNNNTTGG 2 cut(s) 155, 187
AluBI AGCT 4 cut(s) 293, 641, 824, 969
AluI AGCT 4 cut(s) 293, 641, 824, 969
Alw21I GWGCWC 1 cut(s) 616
AoxI GGCC 2 cut(s) 12, 507
ApeKI GCWGC 2 cut(s) 641, 760
Asp700I GAANNNNTTC 1 cut(s) 170
AspS9I GGNCC 1 cut(s) 556
AsuC2I CCSGG 1 cut(s) 704
AsuHPI GGTGA 4 cut(s) 16, 73, 799, 865
AvaII GGWCC 1 cut(s) 556
Bbv12I GWGCWC 1 cut(s) 616
BbvI GCAGC 2 cut(s) 628, 772
BccI CCATC 6 cut(s) 311, 457, 485, 518, 739, 853
BcgI CGANNNNNNTGC 2 cut(s) 451, 485
BciT130I CCWGG 1 cut(s) 448
BclI TGATCA 1 cut(s) 379
BcnI CCSGG 1 cut(s) 704
BfaI CTAG 1 cut(s) 144
BfmI CTRYAG 1 cut(s) 356
BfuAI ACCTGC 1 cut(s) 449
BisI GCNGC 2 cut(s) 642, 761
BlsI GCNGC 2 cut(s) 643, 762
BmcAI AGTACT 2 cut(s) 108, 731
Bme1390I CCNGG 2 cut(s) 448, 704
Bme18I GGWCC 1 cut(s) 556
BmgT120I GGNCC 1 cut(s) 556
BmrFI CCNGG 2 cut(s) 448, 704
BmsI GCATC 3 cut(s) 31, 459, 709
BpmI CTGGAG 1 cut(s) 638
Bpu10I CCTNAGC 1 cut(s) 294
BpuEI CTTGAG 3 cut(s) 299, 575, 758
BpuMI CCSGG 1 cut(s) 704
Bsa29I ATCGAT 1 cut(s) 315
BsaHI GRCGYC 1 cut(s) 234
BsaJI CCNNGG 3 cut(s) 36, 446, 606
Bsc4I CCNNNNNNNGG 2 cut(s) 447, 595
Bse118I RCCGGY 1 cut(s) 20
Bse1I ACTGG 2 cut(s) 254, 927
Bse3DI GCAATG 2 cut(s) 31, 237
BseBI CCWGG 1 cut(s) 448
BseCI ATCGAT 1 cut(s) 315
BseDI CCNNGG 3 cut(s) 36, 446, 606
BseGI GGATG 4 cut(s) 46, 201, 303, 496
BseLI CCNNNNNNNGG 2 cut(s) 447, 595
BseMI GCAATG 2 cut(s) 31, 237
BseMII CTCAG 1 cut(s) 706
BseNI ACTGG 2 cut(s) 254, 927
BseRI GAGGAG 1 cut(s) 275
BseXI GCAGC 2 cut(s) 628, 772
BseYI CCCAGC 1 cut(s) 644
Bsh1236I CGCG 1 cut(s) 429
BshFI GGCC 2 cut(s) 14, 509
BshVI ATCGAT 1 cut(s) 315
BsiHKAI GWGCWC 1 cut(s) 616
BsiSI CCGG 2 cut(s) 21, 704
BslFI GGGAC 1 cut(s) 702
BslI CCNNNNNNNGG 2 cut(s) 447, 595
BsmFI GGGAC 1 cut(s) 702
BsnI GGCC 2 cut(s) 14, 509
Bsp1286I GDGCHC 1 cut(s) 616
Bsp143I GATC 1 cut(s) 379
BspACI CCGC 2 cut(s) 427, 785
BspANI GGCC 2 cut(s) 14, 509
BspCNI CTCAG 1 cut(s) 705
BspDI ATCGAT 1 cut(s) 315
BspFNI CGCG 1 cut(s) 429
BspHI TCATGA 1 cut(s) 939
BspMAI CTGCAG 1 cut(s) 360
BspMI ACCTGC 1 cut(s) 449
BspQI GCTCTTC 1 cut(s) 959
BsrDI GCAATG 2 cut(s) 31, 237
BsrFI RCCGGY 1 cut(s) 20
BsrI ACTGG 2 cut(s) 254, 927
BssAI RCCGGY 1 cut(s) 20
BssECI CCNNGG 3 cut(s) 36, 446, 606
BssMI GATC 1 cut(s) 379
BssNI GRCGYC 1 cut(s) 234
BssT1I CCWWGG 2 cut(s) 36, 606
Bst2UI CCWGG 1 cut(s) 448
Bst4CI ACNGT 3 cut(s) 106, 459, 676
Bst6I CTCTTC 2 cut(s) 822, 959
BstACI GRCGYC 1 cut(s) 234
BstC8I GCNNGC 1 cut(s) 22
BstDEI CTNAG 2 cut(s) 294, 692
BstF5I GGATG 4 cut(s) 46, 201, 303, 496
BstFNI CGCG 1 cut(s) 429
BstKTI GATC 1 cut(s) 382
BstMBI GATC 1 cut(s) 379
BstMWI GCNNNNNNNGC 3 cut(s) 435, 620, 650
BstNI CCWGG 1 cut(s) 448
BstNSI RCATGY 1 cut(s) 223
BstSCI CCNGG 2 cut(s) 446, 702
BstSFI CTRYAG 1 cut(s) 356
BstUI CGCG 1 cut(s) 429
BstV1I GCAGC 2 cut(s) 628, 772
Bsu15I ATCGAT 1 cut(s) 315
BsuRI GGCC 2 cut(s) 14, 509
BsuTUI ATCGAT 1 cut(s) 315
BtsCI GGATG 4 cut(s) 46, 201, 303, 496
BtsI GCAGTG 1 cut(s) 353
BtsIMutI CAGTG 5 cut(s) 261, 353, 399, 672, 700
BveI ACCTGC 1 cut(s) 449
Cac8I GCNNGC 1 cut(s) 22
CciI TCATGA 1 cut(s) 939
Cfr10I RCCGGY 1 cut(s) 20
Cfr13I GGNCC 1 cut(s) 556
ClaI ATCGAT 1 cut(s) 315
CseI GACGC 1 cut(s) 242
Csp6I GTAC 3 cut(s) 107, 730, 950
CviAII CATG 5 cut(s) 220, 383, 503, 634, 940
CviQI GTAC 3 cut(s) 107, 730, 950
DdeI CTNAG 2 cut(s) 294, 692
DpnI GATC 1 cut(s) 381
DpnII GATC 1 cut(s) 379
DraI TTTAAA 1 cut(s) 906
Eam1104I CTCTTC 2 cut(s) 822, 959
EarI CTCTTC 2 cut(s) 822, 959
Eco130I CCWWGG 2 cut(s) 36, 606
Eco47I GGWCC 1 cut(s) 556
Eco57I CTGAAG 1 cut(s) 846
EcoRII CCWGG 1 cut(s) 446
EcoT14I CCWWGG 2 cut(s) 36, 606
ErhI CCWWGG 2 cut(s) 36, 606
FaeI CATG 5 cut(s) 223, 386, 506, 637, 943
FalI AAGNNNNNCTT 2 cut(s) 716, 748
FaqI GGGAC 1 cut(s) 702
FatI CATG 5 cut(s) 219, 382, 502, 633, 939
FbaI TGATCA 1 cut(s) 379
FblI GTMKAC 1 cut(s) 54
Fnu4HI GCNGC 2 cut(s) 642, 761
FokI GGATG 4 cut(s) 53, 208, 290, 503
Fsp4HI GCNGC 2 cut(s) 642, 761
FspBI CTAG 1 cut(s) 144
GluI GCNGC 2 cut(s) 642, 761
GsaI CCCAGC 1 cut(s) 648
GsuI CTGGAG 1 cut(s) 638
HaeIII GGCC 2 cut(s) 14, 509
HapII CCGG 2 cut(s) 21, 704
HgaI GACGC 1 cut(s) 242
Hin1I GRCGYC 1 cut(s) 234
Hin1II CATG 5 cut(s) 223, 386, 506, 637, 943
HincII GTYRAC 1 cut(s) 388
HindII GTYRAC 1 cut(s) 388
HinfI GANTC 3 cut(s) 140, 431, 690
HpaII CCGG 2 cut(s) 21, 704
HphI GGTGA 4 cut(s) 16, 73, 799, 865
Hpy166II GTNNAC 2 cut(s) 55, 388
Hpy188I TCNGA 2 cut(s) 139, 574
Hpy188III TCNNGA 3 cut(s) 268, 617, 940
Hpy8I GTNNAC 2 cut(s) 55, 388
HpyAV CCTTC 5 cut(s) 788, 826, 880, 892, 927
HpyCH4III ACNGT 3 cut(s) 106, 459, 676
HpyCH4IV ACGT 1 cut(s) 371
HpyCH4V TGCA 3 cut(s) 125, 358, 472
HpyF10VI GCNNNNNNNGC 3 cut(s) 435, 620, 650
HpyF3I CTNAG 2 cut(s) 294, 692
HpySE526I ACGT 1 cut(s) 371
Hsp92I GRCGYC 1 cut(s) 234
Hsp92II CATG 5 cut(s) 223, 386, 506, 637, 943
KroI GCCGGC 1 cut(s) 20
KroNI GCCGGC 1 cut(s) 22
Ksp22I TGATCA 1 cut(s) 379
Kzo9I GATC 1 cut(s) 379
LguI GCTCTTC 1 cut(s) 959
Lsp1109I GCAGC 2 cut(s) 628, 772
LweI GCATC 3 cut(s) 31, 459, 709
MaeI CTAG 1 cut(s) 144
MaeII ACGT 1 cut(s) 371
MaeIII GTNAC 2 cut(s) 79, 432
MalI GATC 1 cut(s) 381
MboI GATC 1 cut(s) 379
MboII GAAGA 1 cut(s) 839
MhlI GDGCHC 1 cut(s) 616
MluCI AATT 2 cut(s) 419, 927
MlyI GAGTC 2 cut(s) 440, 684
MmeI TCCRAC 1 cut(s) 165
MroNI GCCGGC 1 cut(s) 20
MroXI GAANNNNTTC 1 cut(s) 170
MseI TTAA 2 cut(s) 680, 905
MspA1I CMGCKG 1 cut(s) 824
MspI CCGG 2 cut(s) 21, 704
MspR9I CCNGG 2 cut(s) 448, 704
MvaI CCWGG 1 cut(s) 448
MvnI CGCG 1 cut(s) 429
MwoI GCNNNNNNNGC 3 cut(s) 435, 620, 650
NaeI GCCGGC 1 cut(s) 22
NciI CCSGG 1 cut(s) 704
NdeII GATC 1 cut(s) 379
NgoMIV GCCGGC 1 cut(s) 20
NlaIII CATG 5 cut(s) 223, 386, 506, 637, 943
NmuCI GTSAC 2 cut(s) 79, 432
NspI RCATGY 1 cut(s) 223
PagI TCATGA 1 cut(s) 939
PaqCI CACCTGC 1 cut(s) 449
PciI ACATGT 1 cut(s) 219
PciSI GCTCTTC 1 cut(s) 959
PdiI GCCGGC 1 cut(s) 22
PdmI GAANNNNTTC 1 cut(s) 170
PfeI GAWTC 1 cut(s) 140
PkrI GCNGC 2 cut(s) 643, 762
PleI GAGTC 2 cut(s) 439, 684
PpsI GAGTC 2 cut(s) 439, 684
PscI ACATGT 1 cut(s) 219
Psp6I CCWGG 1 cut(s) 446
PspFI CCCAGC 1 cut(s) 644
PspGI CCWGG 1 cut(s) 446
PspPI GGNCC 1 cut(s) 556
PstI CTGCAG 1 cut(s) 360
PvuII CAGCTG 1 cut(s) 824
RsaI GTAC 3 cut(s) 108, 731, 951
RsaNI GTAC 3 cut(s) 107, 730, 950
SapI GCTCTTC 1 cut(s) 959
SaqAI TTAA 2 cut(s) 680, 905
SatI GCNGC 2 cut(s) 642, 761
Sau3AI GATC 1 cut(s) 379
Sau96I GGNCC 1 cut(s) 556
ScaI AGTACT 2 cut(s) 108, 731
SchI GAGTC 2 cut(s) 440, 684
ScrFI CCNGG 2 cut(s) 448, 704
SduI GDGCHC 1 cut(s) 616
SfaNI GCATC 3 cut(s) 31, 459, 709
SfcI CTRYAG 1 cut(s) 356
SinI GGWCC 1 cut(s) 556
SmlI CTYRAG 3 cut(s) 278, 590, 737
SmoI CTYRAG 3 cut(s) 278, 590, 737
Sse9I AATT 2 cut(s) 419, 927
SsiI CCGC 2 cut(s) 427, 785
SspMI CTAG 1 cut(s) 144
StyD4I CCNGG 2 cut(s) 446, 702
StyI CCWWGG 2 cut(s) 36, 606
TaaI ACNGT 3 cut(s) 106, 459, 676
TaiI ACGT 1 cut(s) 374
TaqI TCGA 3 cut(s) 315, 461, 513
TasI AATT 2 cut(s) 419, 927
TatI WGTACW 3 cut(s) 106, 729, 949
TfiI GAWTC 1 cut(s) 140
Tru1I TTAA 2 cut(s) 680, 905
Tru9I TTAA 2 cut(s) 680, 905
TscAI CASTG 5 cut(s) 261, 360, 406, 679, 700
TseFI GTSAC 2 cut(s) 79, 432
TseI GCWGC 2 cut(s) 641, 760
Tsp45I GTSAC 2 cut(s) 79, 432
TspDTI ATGAA 6 cut(s) 212, 292, 380, 593, 911, 956
TspRI CASTG 5 cut(s) 261, 360, 406, 679, 700
VpaK11BI GGWCC 1 cut(s) 556
XceI RCATGY 1 cut(s) 223
XcmI CCANNNNNNNNNTGG 1 cut(s) 613
XmiI GTMKAC 1 cut(s) 54
XmnI GAANNNNTTC 1 cut(s) 170
XspI CTAG 1 cut(s) 144
ZrmI AGTACT 2 cut(s) 108, 731
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.