RLG00000001123

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000101
Physical Location & Seq
Reverse (-)
10522258 .. 10523343
1086 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001123

Sequence Viewer

Length: 1086 bp
ATGGCTGACACACCTAATTCTAGTGATGAAGACCTCAAGAAACATTTGATGAAGATTTATGAGGATGTGACCAAAGACTGTGAGGATAAGGAATTGAGAAAAATATTTGATTGGATTGTGGACTATGATGCCCTTAATGCAAATGCGATTCATATGTTCAGTTCTCTGGCAGATTGCGGCTTCCGTGATGAAGCGAGAGAGCTCTTTAAGCCTTATTCTGAGCAGACCACACTGCTAGAAGTGGCTGTCTTCACCATGGTGATTATGGCCTACGCCGCCAATGGCAAGACCAAGGATGCTAACAAGGTATACCAGCAGATGATAGCCTCTGGTGTCACCCCCACCGCCTACACGTACACTTTAATCATCTGCGGAATGGCAAAAGACTTTTCGGATTCTAATTTCGTCGGGTATGCCAAGAAGTATTTCCTTGAAATGTTGGATAGGGGGATGAAGCCCCAGTATCAACCCTACATGTATGTTATGGATGCCATTGCCTACCGAGAGCCAGTGGAGGAGGCCAAGAAGTTCCTTGAGCAGATAAAAGCTAAGGGGTTCATCCCTGTCATTGATGATTTTCAATACAAAGAAAACCACCTCACAGAAGCATTGCACCCAATGAAAATGTATGCTGATCTCATCGTCAACAACAACACTGACAAGGTTGTTCAAAAATTGTTCCGCGAGTCATGCCTCTCCCCTTGGATAGAACGGTCGATGGAGGTGCACAAGGCTTTGGTAGAGGATGGAAATGTGGACGAGGCCATCGAGCCCTATCATACCATTCAACAGACAGGCGTAGAGCCATTGGTCCAAATCCACACCTCTGTTATTAAAGCCTACCTCAAGTTTGGCAAGACCAAGGGTGCTCTGGAGGCGTATCTAGCCATGTTAGCTGCTGGGGTTGCCCCCAACTCCTACACTTACACTGTTTTAATCAAGGGACTCTGTGCTGACTGCAACTTCTTTAGAGATGCCAAGAAGTACTTGCTTGAGATGATGGACAAGGGGAAGCAGCCTAATGTTGCTGCCTATACTGCAGTGATAGAAGGCTTTGTGCTTTGGGAGGACAAGACAGCTGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

362

Amino Acids

41.16

Weight (kDa)

5.2

Isoelectric Point (pI)

26.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 79 - 123 8.9e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 81 - 128 4.5e-11 PPR repeat family
TPR_24 PF23276 255 - 357 1.1e-07 Fungal tetratrico peptide repeats
PPR_2 PF13041 275 - 317 1.8e-11 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 309
AccII CGCG 1 cut(s) 684
AciI CCGC 5 cut(s) 177, 276, 345, 372, 682
AfaI GTAC 2 cut(s) 356, 986
AflIII ACRYGT 2 cut(s) 351, 474
AgsI TTSAA 4 cut(s) 434, 581, 671, 788
AjuI GAANNNNNNNTTGG 2 cut(s) 410, 442
AleI CACNNNNGTG 1 cut(s) 257
AluBI AGCT 4 cut(s) 202, 548, 896, 1079
AluI AGCT 4 cut(s) 202, 548, 896, 1079
Alw21I GWGCWC 3 cut(s) 204, 729, 871
Alw44I GTGCAC 1 cut(s) 725
AoxI GGCC 3 cut(s) 267, 519, 762
ApaLI GTGCAC 1 cut(s) 725
ApeKI GCWGC 3 cut(s) 896, 1015, 1028
Asp700I GAANNNNTTC 1 cut(s) 425
AspS9I GGNCC 1 cut(s) 811
AsuHPI GGTGA 3 cut(s) 244, 271, 328
AvaII GGWCC 1 cut(s) 811
BaeGI GKGCMC 1 cut(s) 729
BanII GRGCYC 2 cut(s) 204, 774
BbsI GAAGAC 2 cut(s) 36, 241
Bbv12I GWGCWC 3 cut(s) 204, 729, 871
BbvI GCAGC 3 cut(s) 883, 1015, 1027
BccI CCATC 4 cut(s) 712, 740, 773, 994
BcgI CGANNNNNNTGC 2 cut(s) 706, 740
BfaI CTAG 3 cut(s) 21, 236, 884
BfmI CTRYAG 1 cut(s) 1038
BisI GCNGC 5 cut(s) 178, 276, 897, 1016, 1029
BlsI GCNGC 5 cut(s) 179, 277, 898, 1017, 1030
BmcAI AGTACT 1 cut(s) 986
Bme18I GGWCC 1 cut(s) 811
BmgT120I GGNCC 1 cut(s) 811
BmrI ACTGGG 1 cut(s) 454
BmsI GCATC 4 cut(s) 118, 286, 478, 964
BmuI ACTGGG 1 cut(s) 454
BpiI GAAGAC 2 cut(s) 36, 241
BpmI CTGGAG 1 cut(s) 893
Bpu10I CCTNAGC 1 cut(s) 549
BpuEI CTTGAG 4 cut(s) 20, 554, 830, 1013
BsaAI YACGTR 1 cut(s) 354
BsaJI CCNNGG 4 cut(s) 255, 291, 701, 861
Bse1I ACTGG 2 cut(s) 460, 509
Bse3DI GCAATG 2 cut(s) 492, 608
BseDI CCNNGG 4 cut(s) 255, 291, 701, 861
BseGI GGATG 6 cut(s) 70, 301, 456, 493, 558, 751
BseMI GCAATG 2 cut(s) 492, 608
BseMII CTCAG 1 cut(s) 210
BseNI ACTGG 2 cut(s) 460, 509
BseRI GAGGAG 1 cut(s) 530
BseSI GKGCMC 1 cut(s) 729
BseXI GCAGC 3 cut(s) 883, 1015, 1027
BseYI CCCAGC 1 cut(s) 899
Bsh1236I CGCG 1 cut(s) 684
Bsh1285I CGRYCG 1 cut(s) 716
BshFI GGCC 3 cut(s) 269, 521, 764
BsiEI CGRYCG 1 cut(s) 716
BsiHKAI GWGCWC 3 cut(s) 204, 729, 871
BslFI GGGAC 1 cut(s) 957
BsmFI GGGAC 1 cut(s) 957
BsnI GGCC 3 cut(s) 269, 521, 764
Bsp1286I GDGCHC 4 cut(s) 204, 729, 774, 871
Bsp143I GATC 1 cut(s) 634
Bsp19I CCATGG 1 cut(s) 255
BspACI CCGC 5 cut(s) 177, 276, 345, 372, 682
BspANI GGCC 3 cut(s) 269, 521, 764
BspCNI CTCAG 1 cut(s) 211
BspFNI CGCG 1 cut(s) 684
BspMAI CTGCAG 1 cut(s) 1042
BsrDI GCAATG 2 cut(s) 492, 608
BsrI ACTGG 2 cut(s) 460, 509
BssECI CCNNGG 4 cut(s) 255, 291, 701, 861
BssMI GATC 1 cut(s) 634
BssNAI GTATAC 1 cut(s) 310
BssT1I CCWWGG 4 cut(s) 255, 291, 701, 861
Bst1107I GTATAC 1 cut(s) 310
Bst4CI ACNGT 3 cut(s) 80, 714, 931
BstBAI YACGTR 1 cut(s) 354
BstDEI CTNAG 2 cut(s) 219, 549
BstDSI CCRYGG 1 cut(s) 255
BstF5I GGATG 6 cut(s) 70, 301, 456, 493, 558, 751
BstFNI CGCG 1 cut(s) 684
BstKTI GATC 1 cut(s) 637
BstMBI GATC 1 cut(s) 634
BstMCI CGRYCG 1 cut(s) 716
BstMWI GCNNNNNNNGC 9 cut(s) 137, 208, 275, 690, 875, 884, 893, 905, 1037
BstNSI RCATGY 1 cut(s) 478
BstSFI CTRYAG 1 cut(s) 1038
BstSLI GKGCMC 1 cut(s) 729
BstUI CGCG 1 cut(s) 684
BstV1I GCAGC 3 cut(s) 883, 1015, 1027
BstV2I GAAGAC 2 cut(s) 36, 241
BstZ17I GTATAC 1 cut(s) 310
BsuRI GGCC 3 cut(s) 269, 521, 764
BtgI CCRYGG 1 cut(s) 255
BtsCI GGATG 6 cut(s) 70, 301, 456, 493, 558, 751
BtsI GCAGTG 2 cut(s) 230, 1047
BtsIMutI CAGTG 5 cut(s) 230, 516, 654, 927, 1047
Cfr13I GGNCC 1 cut(s) 811
Csp6I GTAC 2 cut(s) 355, 985
CviAII CATG 4 cut(s) 256, 475, 690, 889
CviQI GTAC 2 cut(s) 355, 985
DdeI CTNAG 2 cut(s) 219, 549
DpnI GATC 1 cut(s) 636
DpnII GATC 1 cut(s) 634
Ecl136II GAGCTC 1 cut(s) 202
Eco130I CCWWGG 4 cut(s) 255, 291, 701, 861
Eco24I GRGCYC 2 cut(s) 204, 774
Eco47I GGWCC 1 cut(s) 811
Eco53kI GAGCTC 1 cut(s) 202
EcoICRI GAGCTC 1 cut(s) 202
EcoT14I CCWWGG 4 cut(s) 255, 291, 701, 861
EcoT38I GRGCYC 2 cut(s) 204, 774
ErhI CCWWGG 4 cut(s) 255, 291, 701, 861
FaeI CATG 4 cut(s) 259, 478, 693, 892
FalI AAGNNNNNCTT 2 cut(s) 971, 1003
FaqI GGGAC 1 cut(s) 957
FatI CATG 4 cut(s) 255, 474, 689, 888
FauNDI CATATG 1 cut(s) 153
FblI GTMKAC 1 cut(s) 309
Fnu4HI GCNGC 5 cut(s) 178, 276, 897, 1016, 1029
FokI GGATG 6 cut(s) 77, 308, 463, 500, 545, 758
FriOI GRGCYC 2 cut(s) 204, 774
Fsp4HI GCNGC 5 cut(s) 178, 276, 897, 1016, 1029
FspBI CTAG 3 cut(s) 21, 236, 884
GluI GCNGC 5 cut(s) 178, 276, 897, 1016, 1029
GsaI CCCAGC 1 cut(s) 903
GsuI CTGGAG 1 cut(s) 893
HaeIII GGCC 3 cut(s) 269, 521, 764
Hin1II CATG 4 cut(s) 259, 478, 693, 892
HincII GTYRAC 1 cut(s) 646
HindII GTYRAC 1 cut(s) 646
HinfI GANTC 4 cut(s) 148, 395, 686, 945
HphI GGTGA 3 cut(s) 244, 271, 328
Hpy166II GTNNAC 6 cut(s) 121, 310, 357, 646, 727, 757
Hpy188I TCNGA 2 cut(s) 220, 394
Hpy188III TCNNGA 2 cut(s) 37, 872
Hpy8I GTNNAC 6 cut(s) 121, 310, 357, 646, 727, 757
Hpy99I CGWCG 1 cut(s) 410
HpyAV CCTTC 1 cut(s) 1043
HpyCH4III ACNGT 3 cut(s) 80, 714, 931
HpyCH4IV ACGT 1 cut(s) 353
HpyCH4V TGCA 5 cut(s) 140, 613, 727, 960, 1040
HpyF10VI GCNNNNNNNGC 9 cut(s) 137, 208, 275, 690, 875, 884, 893, 905, 1037
HpyF3I CTNAG 2 cut(s) 219, 549
HpySE526I ACGT 1 cut(s) 353
Hsp92II CATG 4 cut(s) 259, 478, 693, 892
Kzo9I GATC 1 cut(s) 634
LpnPI CCDG 9 cut(s) 152, 315, 326, 473, 522, 576, 780, 857, 885
Lsp1109I GCAGC 3 cut(s) 883, 1015, 1027
LweI GCATC 4 cut(s) 118, 286, 478, 964
MaeI CTAG 3 cut(s) 21, 236, 884
MaeII ACGT 1 cut(s) 353
MaeIII GTNAC 2 cut(s) 67, 334
MalI GATC 1 cut(s) 636
MboI GATC 1 cut(s) 634
MboII GAAGA 3 cut(s) 41, 64, 241
MhlI GDGCHC 4 cut(s) 204, 729, 774, 871
MluCI AATT 4 cut(s) 16, 92, 400, 674
MlyI GAGTC 2 cut(s) 695, 939
MmeI TCCRAC 1 cut(s) 420
MroXI GAANNNNTTC 1 cut(s) 425
MseI TTAA 5 cut(s) 135, 207, 362, 834, 935
MslI CAYNNNNRTG 1 cut(s) 257
MspA1I CMGCKG 1 cut(s) 1079
MvnI CGCG 1 cut(s) 684
MwoI GCNNNNNNNGC 9 cut(s) 137, 208, 275, 690, 875, 884, 893, 905, 1037
NcoI CCATGG 1 cut(s) 255
NdeI CATATG 1 cut(s) 153
NdeII GATC 1 cut(s) 634
NlaIII CATG 4 cut(s) 259, 478, 693, 892
NmuCI GTSAC 2 cut(s) 67, 334
NspI RCATGY 1 cut(s) 478
OliI CACNNNNGTG 1 cut(s) 257
PciI ACATGT 1 cut(s) 474
PcsI WCGNNNNNNNCGW 1 cut(s) 765
PdmI GAANNNNTTC 1 cut(s) 425
PfeI GAWTC 2 cut(s) 148, 395
PkrI GCNGC 5 cut(s) 179, 277, 898, 1017, 1030
PleI GAGTC 2 cut(s) 694, 939
PpsI GAGTC 2 cut(s) 694, 939
Ppu21I YACGTR 1 cut(s) 354
PscI ACATGT 1 cut(s) 474
Psp124BI GAGCTC 1 cut(s) 204
PspFI CCCAGC 1 cut(s) 899
PspPI GGNCC 1 cut(s) 811
PstI CTGCAG 1 cut(s) 1042
PvuII CAGCTG 1 cut(s) 1079
RsaI GTAC 2 cut(s) 356, 986
RsaNI GTAC 2 cut(s) 355, 985
RseI CAYNNNNRTG 1 cut(s) 257
SacI GAGCTC 1 cut(s) 204
SaqAI TTAA 5 cut(s) 135, 207, 362, 834, 935
SatI GCNGC 5 cut(s) 178, 276, 897, 1016, 1029
Sau3AI GATC 1 cut(s) 634
Sau96I GGNCC 1 cut(s) 811
ScaI AGTACT 1 cut(s) 986
SchI GAGTC 2 cut(s) 695, 939
SduI GDGCHC 4 cut(s) 204, 729, 774, 871
SfaNI GCATC 4 cut(s) 118, 286, 478, 964
SfcI CTRYAG 1 cut(s) 1038
SinI GGWCC 1 cut(s) 811
SmiMI CAYNNNNRTG 1 cut(s) 257
SmlI CTYRAG 4 cut(s) 35, 533, 845, 992
SmoI CTYRAG 4 cut(s) 35, 533, 845, 992
Sse9I AATT 4 cut(s) 16, 92, 400, 674
SsiI CCGC 5 cut(s) 177, 276, 345, 372, 682
SspI AATATT 1 cut(s) 105
SspMI CTAG 3 cut(s) 21, 236, 884
SstI GAGCTC 1 cut(s) 204
StyI CCWWGG 4 cut(s) 255, 291, 701, 861
TaaI ACNGT 3 cut(s) 80, 714, 931
TaiI ACGT 1 cut(s) 356
TaqI TCGA 2 cut(s) 716, 768
TasI AATT 4 cut(s) 16, 92, 400, 674
TatI WGTACW 1 cut(s) 984
TauI GCSGC 2 cut(s) 180, 278
TfiI GAWTC 2 cut(s) 148, 395
Tru1I TTAA 5 cut(s) 135, 207, 362, 834, 935
Tru9I TTAA 5 cut(s) 135, 207, 362, 834, 935
TscAI CASTG 5 cut(s) 237, 516, 661, 934, 1047
TseFI GTSAC 2 cut(s) 67, 334
TseI GCWGC 3 cut(s) 896, 1015, 1028
Tsp45I GTSAC 2 cut(s) 67, 334
TspDTI ATGAA 7 cut(s) 42, 65, 140, 204, 467, 547, 635
TspGWI ACGGA 1 cut(s) 173
TspRI CASTG 5 cut(s) 237, 516, 661, 934, 1047
VneI GTGCAC 1 cut(s) 725
VpaK11BI GGWCC 1 cut(s) 811
XceI RCATGY 1 cut(s) 478
XcmI CCANNNNNNNNNTGG 2 cut(s) 262, 868
XmiI GTMKAC 1 cut(s) 309
XmnI GAANNNNTTC 1 cut(s) 425
XspI CTAG 3 cut(s) 21, 236, 884
ZrmI AGTACT 1 cut(s) 986
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.