FvH4_5g35080

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000101
Physical Location & Seq
Forward (+)
25646576 .. 25648706
2131 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g35080.t1

Sequence Viewer

Length: 1233 bp
ATGGCTCACACCCAAGTCAAGTTGACTAGTCCCCCCAATGCTAGAGCCGATGACCGCAAGAAACATTTAATGAACATTTTCCGGGATGTGACCAAAGACTGTAAGCATAAGCAATTGAGAAGAATGTTTGATGAGTTTGCGGACTATGATGCCCTTAATTCAAGTGCAAATCTTATGTTCAGTTCTATGGTAGATTGCGACTTTCTTGATGAAGCGAGAGAGCTCTTTAAGCCTCTCCCTGATCAGGTCACACTGCCGGAAGTGATCGTCTTCACCATGGTGATTCAGATGTACACCATTGCTCGCAAGACCATGGATGCTCACAAGGTCTACCAGCAGATGATAGCCTCTGGTGTCTTGCCCACAGCCCACACTTACACAACAATCATCTTGGCAACCACACTAGATCCTAATTTTGTTGGGTATGCCAAGAAGTATTTCCTTGAAATGTTGGATAGGGGGATGAAGCCTCCTTATGCAACCTACCGATCTGTTATGGATGCCATTTCCTATCGAGGGCCAGGTGAGGAGGCCAACAAGTTCGTTGAGCAGATAAAAGCTAAGGGGTTCATCCCTGACCACAATGGTTTTCAAAACAAACCATGCCACCTCAGAATAACCTTCATGTGTGATGATCTCCACCACAACAATATTCTCGACAGGGATGTGCAAAAATTTGTCAAGAAATTGCGCGCTTGCCCTACAAACCTTATTGAATCCACAATGAAGATGTTTTGTGCATTGGCAGACGATGGAAATGTTTCTGAAGCTATAGAGTTCAATACCACAATTACAAAGACGCGCACAGAGCCCTCAGTCTTATTCCACACCTTGGTTATTGAAGCCTACCTCAAGTTTGGCAAAATCAAGGGTGCTCTGGAGGCATACCTGGCCATGTTAGCTGCCGGGATTGCCCCCAACTCCTACACGTACACTGTGTTAATCAAGGGACTCGCTGCATACCCCGAATTCTTTGGAGATGCCAAGAAGTATTTGCTTGAGATGATGGACAAGGGAAACCGGCCCAATGCTGCTACCTTCACTGCGGTTATAGAAGGCTTTGCAAATAATGAGGACAAGGCAGCTGAGGAGGAGGGAAAAGAGTATGTGCGGGTAATGATGGATAAGGGGTTTGTGCCTAATGCGAAGGCAATGAGGGAGGTTTTAAAGGGCAGACCGATACCTGTTATACGAAGGATCATGAATGTTGTCCTTTCCAACTTGAAAGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

411

Amino Acids

46.46

Weight (kDa)

8.66

Isoelectric Point (pI)

32.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 86 - 130 4.2e-08 PPR repeat family
TPR_24 PF23276 250 - 360 2.7e-09 Fungal tetratrico peptide repeats
PPR_2 PF13041 272 - 319 1.2e-10 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 832
AccI GTMKAC 1 cut(s) 330
AccII CGCG 2 cut(s) 693, 802
AciI CCGC 4 cut(s) 55, 140, 1046, 1111
AclWI GGATC 2 cut(s) 401, 1205
AcoI YGGCCR 1 cut(s) 891
AcsI RAATTY 2 cut(s) 674, 968
AcuI CTGAAG 1 cut(s) 786
AfaI GTAC 2 cut(s) 293, 932
AfiI CCNNNNNNNGG 3 cut(s) 244, 516, 832
AflIII ACRYGT 1 cut(s) 927
AgsI TTSAA 7 cut(s) 162, 446, 593, 716, 781, 842, 1225
AhlI ACTAGT 1 cut(s) 26
AjnI CCWGG 2 cut(s) 520, 888
AjuI GAANNNNNNNTTGG 2 cut(s) 422, 454
AleI CACNNNNGTG 1 cut(s) 278
AluBI AGCT 5 cut(s) 223, 560, 770, 902, 1085
AluI AGCT 5 cut(s) 223, 560, 770, 902, 1085
Alw21I GWGCWC 2 cut(s) 225, 877
AlwI GGATC 2 cut(s) 401, 1205
AoxI GGCC 4 cut(s) 518, 531, 891, 1022
ApeKI GCWGC 4 cut(s) 902, 956, 1031, 1082
ApoI RAATTY 2 cut(s) 674, 968
Asp700I GAANNNNTTC 3 cut(s) 77, 437, 760
AspLEI GCGC 3 cut(s) 693, 695, 804
AspS9I GGNCC 2 cut(s) 518, 1023
AsuC2I CCSGG 2 cut(s) 83, 907
AsuHPI GGTGA 3 cut(s) 265, 292, 536
BalI TGGCCA 1 cut(s) 893
BanII GRGCYC 2 cut(s) 225, 813
BbsI GAAGAC 1 cut(s) 262
Bbv12I GWGCWC 2 cut(s) 225, 877
BbvCI CCTCAGC 1 cut(s) 1086
BbvI GCAGC 4 cut(s) 889, 943, 1018, 1094
BccI CCATC 3 cut(s) 746, 1000, 1114
BciT130I CCWGG 2 cut(s) 522, 890
BclI TGATCA 1 cut(s) 241
BcnI CCSGG 2 cut(s) 83, 907
BcuI ACTAGT 1 cut(s) 26
BfaI CTAG 3 cut(s) 27, 42, 404
BfmI CTRYAG 1 cut(s) 771
BisI GCNGC 4 cut(s) 903, 957, 1032, 1083
BlsI GCNGC 4 cut(s) 904, 958, 1033, 1084
Bme1390I CCNGG 4 cut(s) 83, 522, 890, 907
BmgT120I GGNCC 2 cut(s) 518, 1023
BmrFI CCNGG 4 cut(s) 83, 522, 890, 907
BmsI GCATC 4 cut(s) 139, 307, 490, 970
BpiI GAAGAC 1 cut(s) 262
BpmI CTGGAG 1 cut(s) 899
Bpu10I CCTNAGC 2 cut(s) 561, 1086
BpuEI CTTGAG 2 cut(s) 836, 1019
BpuMI CCSGG 2 cut(s) 83, 907
BsaAI YACGTR 1 cut(s) 930
BsaJI CCNNGG 3 cut(s) 276, 312, 831
Bsc4I CCNNNNNNNGG 3 cut(s) 244, 516, 832
Bse118I RCCGGY 1 cut(s) 1020
Bse3DI GCAATG 2 cut(s) 297, 1158
BseBI CCWGG 2 cut(s) 522, 890
BseDI CCNNGG 3 cut(s) 276, 312, 831
BseGI GGATG 6 cut(s) 91, 322, 468, 505, 570, 670
BseLI CCNNNNNNNGG 3 cut(s) 244, 516, 832
BseMI GCAATG 2 cut(s) 297, 1158
BseMII CTCAG 3 cut(s) 625, 828, 1077
BsePI GCGCGC 1 cut(s) 691
BseRI GAGGAG 3 cut(s) 542, 1103, 1106
BseXI GCAGC 4 cut(s) 889, 943, 1018, 1094
Bsh1236I CGCG 2 cut(s) 693, 802
BshFI GGCC 4 cut(s) 520, 533, 893, 1024
BsiHKAI GWGCWC 2 cut(s) 225, 877
BsiSI CCGG 4 cut(s) 82, 257, 906, 1021
BslFI GGGAC 2 cut(s) 15, 963
BslI CCNNNNNNNGG 3 cut(s) 244, 516, 832
BsmFI GGGAC 2 cut(s) 15, 963
BsnI GGCC 4 cut(s) 520, 533, 893, 1024
Bsp1286I GDGCHC 3 cut(s) 225, 813, 877
Bsp1407I TGTACA 1 cut(s) 291
Bsp143I GATC 6 cut(s) 241, 264, 406, 488, 634, 1197
Bsp19I CCATGG 2 cut(s) 276, 312
BspACI CCGC 4 cut(s) 55, 140, 1046, 1111
BspANI GGCC 4 cut(s) 520, 533, 893, 1024
BspCNI CTCAG 3 cut(s) 624, 827, 1078
BspFNI CGCG 2 cut(s) 693, 802
BspHI TCATGA 1 cut(s) 1200
BspPI GGATC 2 cut(s) 401, 1205
BsrDI GCAATG 2 cut(s) 297, 1158
BsrFI RCCGGY 1 cut(s) 1020
BsrGI TGTACA 1 cut(s) 291
BssAI RCCGGY 1 cut(s) 1020
BssECI CCNNGG 3 cut(s) 276, 312, 831
BssHII GCGCGC 1 cut(s) 691
BssMI GATC 6 cut(s) 241, 264, 406, 488, 634, 1197
BssT1I CCWWGG 3 cut(s) 276, 312, 831
Bst2UI CCWGG 2 cut(s) 522, 890
Bst4CI ACNGT 2 cut(s) 101, 937
BstAUI TGTACA 1 cut(s) 291
BstBAI YACGTR 1 cut(s) 930
BstC8I GCNNGC 3 cut(s) 304, 693, 697
BstDEI CTNAG 4 cut(s) 561, 611, 814, 1086
BstDSI CCRYGG 2 cut(s) 276, 312
BstF5I GGATG 6 cut(s) 91, 322, 468, 505, 570, 670
BstFNI CGCG 2 cut(s) 693, 802
BstHHI GCGC 3 cut(s) 693, 695, 804
BstKTI GATC 6 cut(s) 244, 267, 409, 491, 637, 1200
BstMBI GATC 6 cut(s) 241, 264, 406, 488, 634, 1197
BstMWI GCNNNNNNNGC 6 cut(s) 229, 808, 881, 890, 899, 911
BstNI CCWGG 2 cut(s) 522, 890
BstSCI CCNGG 4 cut(s) 81, 520, 888, 905
BstSFI CTRYAG 1 cut(s) 771
BstUI CGCG 2 cut(s) 693, 802
BstV1I GCAGC 4 cut(s) 889, 943, 1018, 1094
BstV2I GAAGAC 1 cut(s) 262
BstX2I RGATCY 1 cut(s) 406
BstYI RGATCY 1 cut(s) 406
BsuRI GGCC 4 cut(s) 520, 533, 893, 1024
BtgI CCRYGG 2 cut(s) 276, 312
BtsCI GGATG 6 cut(s) 91, 322, 468, 505, 570, 670
BtsI GCAGTG 2 cut(s) 251, 1041
BtsIMutI CAGTG 3 cut(s) 251, 933, 1041
Cac8I GCNNGC 3 cut(s) 304, 693, 697
CciI TCATGA 1 cut(s) 1200
CfoI GCGC 3 cut(s) 693, 695, 804
Cfr10I RCCGGY 1 cut(s) 1020
Cfr13I GGNCC 2 cut(s) 518, 1023
CseI GACGC 1 cut(s) 808
Csp6I GTAC 2 cut(s) 292, 931
CviAII CATG 6 cut(s) 277, 313, 603, 625, 895, 1201
CviQI GTAC 2 cut(s) 292, 931
DdeI CTNAG 4 cut(s) 561, 611, 814, 1086
DpnI GATC 6 cut(s) 243, 266, 408, 490, 636, 1199
DpnII GATC 6 cut(s) 241, 264, 406, 488, 634, 1197
DraI TTTAAA 1 cut(s) 1167
EaeI YGGCCR 1 cut(s) 891
Ecl136II GAGCTC 1 cut(s) 223
Eco130I CCWWGG 3 cut(s) 276, 312, 831
Eco24I GRGCYC 2 cut(s) 225, 813
Eco53kI GAGCTC 1 cut(s) 223
Eco57I CTGAAG 1 cut(s) 786
EcoICRI GAGCTC 1 cut(s) 223
EcoRI GAATTC 1 cut(s) 968
EcoRII CCWGG 2 cut(s) 520, 888
EcoT14I CCWWGG 3 cut(s) 276, 312, 831
EcoT38I GRGCYC 2 cut(s) 225, 813
ErhI CCWWGG 3 cut(s) 276, 312, 831
FaeI CATG 6 cut(s) 280, 316, 606, 628, 898, 1204
FaqI GGGAC 2 cut(s) 15, 963
FatI CATG 6 cut(s) 276, 312, 602, 624, 894, 1200
FauI CCCGC 1 cut(s) 1104
FbaI TGATCA 1 cut(s) 241
FblI GTMKAC 1 cut(s) 330
Fnu4HI GCNGC 4 cut(s) 903, 957, 1032, 1083
FokI GGATG 6 cut(s) 98, 329, 475, 512, 557, 677
FriOI GRGCYC 2 cut(s) 225, 813
Fsp4HI GCNGC 4 cut(s) 903, 957, 1032, 1083
FspBI CTAG 3 cut(s) 27, 42, 404
GlaI GCGC 3 cut(s) 692, 694, 803
GluI GCNGC 4 cut(s) 903, 957, 1032, 1083
GsuI CTGGAG 1 cut(s) 899
HaeIII GGCC 4 cut(s) 520, 533, 893, 1024
HapII CCGG 4 cut(s) 82, 257, 906, 1021
HgaI GACGC 1 cut(s) 808
HhaI GCGC 3 cut(s) 693, 695, 804
Hin1II CATG 6 cut(s) 280, 316, 606, 628, 898, 1204
Hin6I GCGC 3 cut(s) 691, 693, 802
HinP1I GCGC 3 cut(s) 691, 693, 802
HincII GTYRAC 1 cut(s) 24
HindII GTYRAC 1 cut(s) 24
HinfI GANTC 3 cut(s) 283, 716, 951
HpaII CCGG 4 cut(s) 82, 257, 906, 1021
HphI GGTGA 3 cut(s) 265, 292, 536
Hpy166II GTNNAC 4 cut(s) 24, 294, 331, 933
Hpy188I TCNGA 3 cut(s) 288, 614, 766
Hpy188III TCNNGA 5 cut(s) 206, 656, 682, 878, 1201
Hpy8I GTNNAC 4 cut(s) 24, 294, 331, 933
HpyAV CCTTC 5 cut(s) 631, 1048, 1049, 1141, 1188
HpyCH4III ACNGT 2 cut(s) 101, 937
HpyCH4IV ACGT 1 cut(s) 929
HpyCH4V TGCA 6 cut(s) 167, 479, 670, 740, 959, 1064
HpyF10VI GCNNNNNNNGC 6 cut(s) 229, 808, 881, 890, 899, 911
HpyF3I CTNAG 4 cut(s) 561, 611, 814, 1086
HpySE526I ACGT 1 cut(s) 929
Hsp92II CATG 6 cut(s) 280, 316, 606, 628, 898, 1204
HspAI GCGC 3 cut(s) 691, 693, 802
Ksp22I TGATCA 1 cut(s) 241
Kzo9I GATC 6 cut(s) 241, 264, 406, 488, 634, 1197
Lsp1109I GCAGC 4 cut(s) 889, 943, 1018, 1094
LweI GCATC 4 cut(s) 139, 307, 490, 970
MaeI CTAG 3 cut(s) 27, 42, 404
MaeII ACGT 1 cut(s) 929
MaeIII GTNAC 2 cut(s) 88, 247
MalI GATC 6 cut(s) 243, 266, 408, 490, 636, 1199
MboI GATC 6 cut(s) 241, 264, 406, 488, 634, 1197
MboII GAAGA 3 cut(s) 132, 262, 739
MfeI CAATTG 1 cut(s) 113
MflI RGATCY 1 cut(s) 406
MhlI GDGCHC 3 cut(s) 225, 813, 877
MlsI TGGCCA 1 cut(s) 893
MluCI AATT 7 cut(s) 113, 157, 412, 674, 686, 789, 968
MluNI TGGCCA 1 cut(s) 893
MlyI GAGTC 1 cut(s) 945
MmeI TCCRAC 1 cut(s) 432
Mox20I TGGCCA 1 cut(s) 893
MroXI GAANNNNTTC 3 cut(s) 77, 437, 760
MscI TGGCCA 1 cut(s) 893
MseI TTAA 5 cut(s) 68, 156, 228, 941, 1166
MslI CAYNNNNRTG 1 cut(s) 278
Msp20I TGGCCA 1 cut(s) 893
MspA1I CMGCKG 1 cut(s) 1085
MspI CCGG 4 cut(s) 82, 257, 906, 1021
MspR9I CCNGG 4 cut(s) 83, 522, 890, 907
MunI CAATTG 1 cut(s) 113
MvaI CCWGG 2 cut(s) 522, 890
MvnI CGCG 2 cut(s) 693, 802
MwoI GCNNNNNNNGC 6 cut(s) 229, 808, 881, 890, 899, 911
NciI CCSGG 2 cut(s) 83, 907
NcoI CCATGG 2 cut(s) 276, 312
NdeII GATC 6 cut(s) 241, 264, 406, 488, 634, 1197
NlaIII CATG 6 cut(s) 280, 316, 606, 628, 898, 1204
NmuCI GTSAC 2 cut(s) 88, 247
OliI CACNNNNGTG 1 cut(s) 278
PagI TCATGA 1 cut(s) 1200
PauI GCGCGC 1 cut(s) 691
PdmI GAANNNNTTC 3 cut(s) 77, 437, 760
PfeI GAWTC 2 cut(s) 283, 716
PflMI CCANNNNNTGG 1 cut(s) 832
PfoI TCCNGGA 1 cut(s) 81
PkrI GCNGC 4 cut(s) 904, 958, 1033, 1084
PleI GAGTC 1 cut(s) 945
PpsI GAGTC 1 cut(s) 945
Ppu21I YACGTR 1 cut(s) 930
Psp124BI GAGCTC 1 cut(s) 225
Psp6I CCWGG 2 cut(s) 520, 888
PspGI CCWGG 2 cut(s) 520, 888
PspPI GGNCC 2 cut(s) 518, 1023
PsuI RGATCY 1 cut(s) 406
PteI GCGCGC 1 cut(s) 691
PvuII CAGCTG 1 cut(s) 1085
RsaI GTAC 2 cut(s) 293, 932
RsaNI GTAC 2 cut(s) 292, 931
RseI CAYNNNNRTG 1 cut(s) 278
SacI GAGCTC 1 cut(s) 225
SaqAI TTAA 5 cut(s) 68, 156, 228, 941, 1166
SatI GCNGC 4 cut(s) 903, 957, 1032, 1083
Sau3AI GATC 6 cut(s) 241, 264, 406, 488, 634, 1197
Sau96I GGNCC 2 cut(s) 518, 1023
SchI GAGTC 1 cut(s) 945
ScrFI CCNGG 4 cut(s) 83, 522, 890, 907
SduI GDGCHC 3 cut(s) 225, 813, 877
SfaNI GCATC 4 cut(s) 139, 307, 490, 970
SfcI CTRYAG 1 cut(s) 771
SmiMI CAYNNNNRTG 1 cut(s) 278
SmlI CTYRAG 2 cut(s) 851, 998
SmoI CTYRAG 2 cut(s) 851, 998
SpeI ACTAGT 1 cut(s) 26
Sse9I AATT 7 cut(s) 113, 157, 412, 674, 686, 789, 968
SsiI CCGC 4 cut(s) 55, 140, 1046, 1111
SspI AATATT 1 cut(s) 652
SspMI CTAG 3 cut(s) 27, 42, 404
SstI GAGCTC 1 cut(s) 225
StyD4I CCNGG 4 cut(s) 81, 520, 888, 905
StyI CCWWGG 3 cut(s) 276, 312, 831
TaaI ACNGT 2 cut(s) 101, 937
TaiI ACGT 1 cut(s) 932
TaqI TCGA 2 cut(s) 514, 657
TaqII GACCGA 1 cut(s) 1192
TasI AATT 7 cut(s) 113, 157, 412, 674, 686, 789, 968
TatI WGTACW 1 cut(s) 291
TfiI GAWTC 2 cut(s) 283, 716
Tru1I TTAA 5 cut(s) 68, 156, 228, 941, 1166
Tru9I TTAA 5 cut(s) 68, 156, 228, 941, 1166
TscAI CASTG 3 cut(s) 258, 940, 1048
TseFI GTSAC 2 cut(s) 88, 247
TseI GCWGC 4 cut(s) 902, 956, 1031, 1082
Tsp45I GTSAC 2 cut(s) 88, 247
TspDTI ATGAA 7 cut(s) 86, 225, 479, 559, 613, 740, 1217
TspRI CASTG 3 cut(s) 258, 940, 1048
Van91I CCANNNNNTGG 1 cut(s) 832
XapI RAATTY 2 cut(s) 674, 968
XmiI GTMKAC 1 cut(s) 330
XmnI GAANNNNTTC 3 cut(s) 77, 437, 760
XspI CTAG 3 cut(s) 27, 42, 404
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.