Rroxscaffold_3G00225570

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000101
Physical Location & Seq
Reverse (-)
8789310 .. 8793317
4008 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00225570.1

Sequence Viewer

Length: 867 bp
ATGTTTGACATGAATATTGGGGACTACGACTTCCTTAACGAGTATGCGATTAAGGTGTTCGATGCTATGGCAAATGACACCCTCTCTGAGGAAGCCAAAGTGCTGTTTAAGCCTCGCTCTGAGTCGGCCGTACTGGCTGAAGTGGCCATCTACACCGTTGTCATTTGGGCCTGCATCTGTTCCAGCAAGATCAAGGCTGCTCACAACGTCTACCTGTATATGATAGCCAACGGTGTTGCCCCCACCTCCTGCACTTATATTATACTCATCAACACACTTGCAAATAACTCATCTTCTGATGTCAATTTTGTTCGGTATGCCGAGAAGTATTTTTTGGAAATGTTGGATAAGGGGATGACGCCTCCTTCATCTTCCAACATGGCCGTCTTCAAAGCCATTGCATGCCAGGAGCCGGTGGTGAAGGCCAAGGAGTTCCTTGAGCAGATACAAGCAAAGGGGTTCAGCCCTAAGTTGGACGTTCCTCTCTTTGATGTGGCCTACATGGAAGAAGCAATGAAGGCATTGAAGATGTCTGACGTTCTTATCAACGCTACCCCTGATAAGAAGTTGCAAAAACTCTACCGTAAGTGGAGCACCACCCGCAAACCCCTCAGGGATGAGTTTCCGAAGATGTTCAAAGCCTTGAAAGCCGATGGCAATTATGACCAGGCCATGGAGCTCTATAGGCGCGGTTGGGATACAAACATAATTCCAGAGGCTGATAAGGAGGGCAAACAGTTGGTGGAGGTGATGATGGGCAAGGGGTTTGTGCCAAATGCAAAGGCCATGATGGAGGTTTTGAAGGGAAAACCAAAAGCTGTAATAAGAAGGGTCATGGATATTGTCCGTTCAAAGTTGCGGGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

288

Amino Acids

32.56

Weight (kDa)

8.92

Isoelectric Point (pI)

41.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 48 - 95 5.6e-08 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 673
AccI GTMKAC 1 cut(s) 210
AccII CGCG 1 cut(s) 690
AciI CCGC 3 cut(s) 601, 690, 859
AcoI YGGCCR 3 cut(s) 126, 144, 381
AcuI CTGAAG 1 cut(s) 159
AcyI GRCGYC 1 cut(s) 359
AfaI GTAC 1 cut(s) 132
AfiI CCNNNNNNNGG 4 cut(s) 88, 412, 472, 673
AgsI TTSAA 6 cut(s) 391, 526, 637, 646, 802, 852
AjnI CCWGG 2 cut(s) 405, 666
AjuI GAANNNNNNNTTGG 2 cut(s) 317, 349
AluBI AGCT 2 cut(s) 679, 818
AluI AGCT 2 cut(s) 679, 818
Alw21I GWGCWC 2 cut(s) 596, 681
AlwNI CAGNNNCTG 1 cut(s) 719
AoxI GGCC 8 cut(s) 126, 144, 168, 381, 423, 495, 669, 783
ApeKI GCWGC 1 cut(s) 197
Asp700I GAANNNNTTC 1 cut(s) 632
AspLEI GCGC 1 cut(s) 690
AspS9I GGNCC 1 cut(s) 168
AsuHPI GGTGA 2 cut(s) 430, 760
AxyI CCTNAGG 1 cut(s) 611
BalI TGGCCA 1 cut(s) 146
BanII GRGCYC 1 cut(s) 681
BbsI GAAGAC 1 cut(s) 379
Bbv12I GWGCWC 2 cut(s) 596, 681
BbvI GCAGC 1 cut(s) 184
BccI CCATC 4 cut(s) 155, 647, 748, 784
BceAI ACGGC 2 cut(s) 113, 368
BciT130I CCWGG 2 cut(s) 407, 668
BciVI GTATCC 1 cut(s) 691
BfmI CTRYAG 1 cut(s) 682
BfuI GTATCC 1 cut(s) 691
BglI GCCNNNNNGGC 1 cut(s) 134
BisI GCNGC 1 cut(s) 198
BlsI GCNGC 1 cut(s) 199
Bme1390I CCNGG 2 cut(s) 407, 668
BmgT120I GGNCC 1 cut(s) 168
BmiI GGNNCC 1 cut(s) 411
BmrFI CCNGG 2 cut(s) 407, 668
BmsI GCATC 2 cut(s) 52, 183
BpiI GAAGAC 1 cut(s) 379
BpuEI CTTGAG 1 cut(s) 458
BsaHI GRCGYC 1 cut(s) 359
BsaJI CCNNGG 2 cut(s) 426, 672
Bsc4I CCNNNNNNNGG 4 cut(s) 88, 412, 472, 673
Bse118I RCCGGY 1 cut(s) 412
Bse1I ACTGG 1 cut(s) 138
Bse21I CCTNAGG 1 cut(s) 611
Bse3DI GCAATG 2 cut(s) 396, 519
BseBI CCWGG 2 cut(s) 407, 668
BseDI CCNNGG 2 cut(s) 426, 672
BseGI GGATG 2 cut(s) 360, 622
BseLI CCNNNNNNNGG 4 cut(s) 88, 412, 472, 673
BseMI GCAATG 2 cut(s) 396, 519
BseMII CTCAG 3 cut(s) 78, 111, 625
BseNI ACTGG 1 cut(s) 138
BseX3I CGGCCG 1 cut(s) 126
BseXI GCAGC 1 cut(s) 184
BsgI GTGCAG 1 cut(s) 235
Bsh1236I CGCG 1 cut(s) 690
Bsh1285I CGRYCG 1 cut(s) 129
BshFI GGCC 8 cut(s) 128, 146, 170, 383, 425, 497, 671, 785
BsiEI CGRYCG 1 cut(s) 129
BsiHKAI GWGCWC 2 cut(s) 596, 681
BsiSI CCGG 1 cut(s) 413
BslFI GGGAC 1 cut(s) 35
BslI CCNNNNNNNGG 4 cut(s) 88, 412, 472, 673
BsmFI GGGAC 1 cut(s) 35
BsnI GGCC 8 cut(s) 128, 146, 170, 383, 425, 497, 671, 785
Bsp1286I GDGCHC 2 cut(s) 596, 681
Bsp143I GATC 1 cut(s) 189
Bsp19I CCATGG 1 cut(s) 672
BspACI CCGC 3 cut(s) 601, 690, 859
BspANI GGCC 8 cut(s) 128, 146, 170, 383, 425, 497, 671, 785
BspCNI CTCAG 3 cut(s) 79, 112, 624
BspFNI CGCG 1 cut(s) 690
BspLI GGNNCC 1 cut(s) 411
BsrDI GCAATG 2 cut(s) 396, 519
BsrFI RCCGGY 1 cut(s) 412
BsrI ACTGG 1 cut(s) 138
BssAI RCCGGY 1 cut(s) 412
BssECI CCNNGG 2 cut(s) 426, 672
BssMI GATC 1 cut(s) 189
BssNI GRCGYC 1 cut(s) 359
BssT1I CCWWGG 2 cut(s) 426, 672
Bst2UI CCWGG 2 cut(s) 407, 668
Bst4CI ACNGT 4 cut(s) 157, 233, 584, 738
BstACI GRCGYC 1 cut(s) 359
BstC8I GCNNGC 2 cut(s) 172, 403
BstDEI CTNAG 4 cut(s) 87, 120, 468, 611
BstDSI CCRYGG 1 cut(s) 672
BstENI CCTNNNNNAGG 1 cut(s) 86
BstF5I GGATG 2 cut(s) 360, 622
BstFNI CGCG 1 cut(s) 690
BstHHI GCGC 1 cut(s) 690
BstKTI GATC 1 cut(s) 192
BstMBI GATC 1 cut(s) 189
BstMCI CGRYCG 1 cut(s) 129
BstMWI GCNNNNNNNGC 7 cut(s) 109, 134, 143, 518, 600, 647, 685
BstNI CCWGG 2 cut(s) 407, 668
BstNSI RCATGY 1 cut(s) 405
BstSCI CCNGG 2 cut(s) 405, 666
BstSFI CTRYAG 1 cut(s) 682
BstUI CGCG 1 cut(s) 690
BstV1I GCAGC 1 cut(s) 184
BstV2I GAAGAC 1 cut(s) 379
BstZI CGGCCG 1 cut(s) 126
Bsu36I CCTNAGG 1 cut(s) 611
BsuI GTATCC 1 cut(s) 691
BsuRI GGCC 8 cut(s) 128, 146, 170, 383, 425, 497, 671, 785
BtgI CCRYGG 1 cut(s) 672
BtsCI GGATG 2 cut(s) 360, 622
Cac8I GCNNGC 2 cut(s) 172, 403
CaiI CAGNNNCTG 1 cut(s) 719
CfoI GCGC 1 cut(s) 690
Cfr10I RCCGGY 1 cut(s) 412
Cfr13I GGNCC 1 cut(s) 168
CseI GACGC 1 cut(s) 367
Csp6I GTAC 1 cut(s) 131
CviAII CATG 7 cut(s) 10, 379, 402, 502, 673, 787, 835
CviQI GTAC 1 cut(s) 131
DdeI CTNAG 4 cut(s) 87, 120, 468, 611
DpnI GATC 1 cut(s) 191
DpnII GATC 1 cut(s) 189
EaeI YGGCCR 3 cut(s) 126, 144, 381
EagI CGGCCG 1 cut(s) 126
Ecl136II GAGCTC 1 cut(s) 679
EclXI CGGCCG 1 cut(s) 126
Eco130I CCWWGG 2 cut(s) 426, 672
Eco24I GRGCYC 1 cut(s) 681
Eco52I CGGCCG 1 cut(s) 126
Eco53kI GAGCTC 1 cut(s) 679
Eco57I CTGAAG 1 cut(s) 159
Eco81I CCTNAGG 1 cut(s) 611
EcoICRI GAGCTC 1 cut(s) 679
EcoNI CCTNNNNNAGG 1 cut(s) 86
EcoRII CCWGG 2 cut(s) 405, 666
EcoT14I CCWWGG 2 cut(s) 426, 672
EcoT38I GRGCYC 1 cut(s) 681
ErhI CCWWGG 2 cut(s) 426, 672
FaeI CATG 7 cut(s) 13, 382, 405, 505, 676, 790, 838
FaqI GGGAC 1 cut(s) 35
FatI CATG 7 cut(s) 9, 378, 401, 501, 672, 786, 834
FauI CCCGC 2 cut(s) 608, 852
FblI GTMKAC 1 cut(s) 210
Fnu4HI GCNGC 1 cut(s) 198
FokI GGATG 2 cut(s) 367, 629
FriOI GRGCYC 1 cut(s) 681
Fsp4HI GCNGC 1 cut(s) 198
GlaI GCGC 1 cut(s) 689
GluI GCNGC 1 cut(s) 198
HaeIII GGCC 8 cut(s) 128, 146, 170, 383, 425, 497, 671, 785
HapII CCGG 1 cut(s) 413
HgaI GACGC 1 cut(s) 367
HhaI GCGC 1 cut(s) 690
Hin1I GRCGYC 1 cut(s) 359
Hin1II CATG 7 cut(s) 13, 382, 405, 505, 676, 790, 838
Hin6I GCGC 1 cut(s) 688
HinP1I GCGC 1 cut(s) 688
HinfI GANTC 1 cut(s) 122
HpaII CCGG 1 cut(s) 413
HphI GGTGA 2 cut(s) 430, 760
Hpy166II GTNNAC 1 cut(s) 211
Hpy188I TCNGA 5 cut(s) 88, 121, 298, 535, 627
Hpy188III TCNNGA 1 cut(s) 713
Hpy8I GTNNAC 1 cut(s) 211
HpyAV CCTTC 5 cut(s) 375, 415, 511, 796, 822
HpyCH4III ACNGT 4 cut(s) 157, 233, 584, 738
HpyCH4IV ACGT 3 cut(s) 207, 477, 537
HpyCH4V TGCA 6 cut(s) 174, 252, 281, 401, 571, 779
HpyF10VI GCNNNNNNNGC 7 cut(s) 109, 134, 143, 518, 600, 647, 685
HpyF3I CTNAG 4 cut(s) 87, 120, 468, 611
HpySE526I ACGT 3 cut(s) 207, 477, 537
Hsp92I GRCGYC 1 cut(s) 359
Hsp92II CATG 7 cut(s) 13, 382, 405, 505, 676, 790, 838
HspAI GCGC 1 cut(s) 688
Kzo9I GATC 1 cut(s) 189
LmnI GCTCC 3 cut(s) 409, 591, 676
Lsp1109I GCAGC 1 cut(s) 184
LweI GCATC 2 cut(s) 52, 183
MaeII ACGT 3 cut(s) 207, 477, 537
MalI GATC 1 cut(s) 191
MboI GATC 1 cut(s) 189
MboII GAAGA 6 cut(s) 285, 363, 379, 518, 538, 640
MhlI GDGCHC 2 cut(s) 596, 681
MlsI TGGCCA 1 cut(s) 146
MluCI AATT 3 cut(s) 304, 658, 708
MluNI TGGCCA 1 cut(s) 146
MlyI GAGTC 1 cut(s) 131
MmeI TCCRAC 3 cut(s) 324, 399, 453
Mox20I TGGCCA 1 cut(s) 146
MroXI GAANNNNTTC 1 cut(s) 632
MscI TGGCCA 1 cut(s) 146
MseI TTAA 3 cut(s) 36, 51, 108
Msp20I TGGCCA 1 cut(s) 146
MspI CCGG 1 cut(s) 413
MspR9I CCNGG 2 cut(s) 407, 668
MvaI CCWGG 2 cut(s) 407, 668
MvnI CGCG 1 cut(s) 690
MwoI GCNNNNNNNGC 7 cut(s) 109, 134, 143, 518, 600, 647, 685
NcoI CCATGG 1 cut(s) 672
NdeII GATC 1 cut(s) 189
NlaIII CATG 7 cut(s) 13, 382, 405, 505, 676, 790, 838
NlaIV GGNNCC 1 cut(s) 411
NmeAIII GCCGAG 1 cut(s) 346
NspI RCATGY 1 cut(s) 405
PaeI GCATGC 1 cut(s) 405
PdmI GAANNNNTTC 1 cut(s) 632
PflMI CCANNNNNTGG 1 cut(s) 673
PkrI GCNGC 1 cut(s) 199
PleI GAGTC 1 cut(s) 130
PpsI GAGTC 1 cut(s) 130
Psp124BI GAGCTC 1 cut(s) 681
Psp6I CCWGG 2 cut(s) 405, 666
PspGI CCWGG 2 cut(s) 405, 666
PspN4I GGNNCC 1 cut(s) 411
PspPI GGNCC 1 cut(s) 168
PstNI CAGNNNCTG 1 cut(s) 719
RsaI GTAC 1 cut(s) 132
RsaNI GTAC 1 cut(s) 131
SacI GAGCTC 1 cut(s) 681
SaqAI TTAA 3 cut(s) 36, 51, 108
SatI GCNGC 1 cut(s) 198
Sau3AI GATC 1 cut(s) 189
Sau96I GGNCC 1 cut(s) 168
SchI GAGTC 1 cut(s) 131
ScrFI CCNGG 2 cut(s) 407, 668
SduI GDGCHC 2 cut(s) 596, 681
SfaNI GCATC 2 cut(s) 52, 183
SfcI CTRYAG 1 cut(s) 682
SmlI CTYRAG 1 cut(s) 437
SmoI CTYRAG 1 cut(s) 437
SphI GCATGC 1 cut(s) 405
Sse9I AATT 3 cut(s) 304, 658, 708
SsiI CCGC 3 cut(s) 601, 690, 859
SspI AATATT 1 cut(s) 16
SstI GAGCTC 1 cut(s) 681
StyD4I CCNGG 2 cut(s) 405, 666
StyI CCWWGG 2 cut(s) 426, 672
TaaI ACNGT 4 cut(s) 157, 233, 584, 738
TaiI ACGT 3 cut(s) 210, 480, 540
TaqI TCGA 1 cut(s) 60
TasI AATT 3 cut(s) 304, 658, 708
Tru1I TTAA 3 cut(s) 36, 51, 108
Tru9I TTAA 3 cut(s) 36, 51, 108
TseI GCWGC 1 cut(s) 197
TspDTI ATGAA 3 cut(s) 26, 357, 530
TspGWI ACGGA 1 cut(s) 836
Van91I CCANNNNNTGG 1 cut(s) 673
XagI CCTNNNNNAGG 1 cut(s) 86
XceI RCATGY 1 cut(s) 405
XmiI GTMKAC 1 cut(s) 210
XmnI GAANNNNTTC 1 cut(s) 632
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.