Rh1DG165100

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0000101
Physical Location & Seq
Reverse (-)
33885314 .. 33886959
1646 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG165100.1

Sequence Viewer

Length: 1164 bp
ATGGAGGACACTAGTTTCCCTAATTCTTTTGCTGATGGCCTCAAGAAACATGTAATGAAGGTTTTCGAGGAGGCCACCAAAGACTGTGAGGACAAGGAAGTGAAAGAAATATTTGACTCCATTGGGGACTATGACGACCTTAATGAATTTGGGATCCAAATGTTCAATTTGTTGGCAAATTTCAGCCAGGCTAATGAAGCCAAAGAGCTGTTTAGGCCTCTCTCTGTGCCGGCCGTACTGCCAGACGTGGCTGTCCTCACAATGGTCATTCTGGTTTACGCCCATGCCGGAAAGGCCAAGGCTGCTCTCAAGGCCTATCAGCACAGGATAGCCACTGGTGTCATCCCCACCTCCGCTACTTACAATGCACTCATCACAGCATTCGCAGAAGACTCATCTTCTGATTCCAATTTTGTTGGCTATGCTAAGAAGTATTTTTTGGAAATGTTGGATAAGGGGATGAAGCCCAATCCTGGTTGCTATATATCTGTGTTTAACGCCATTGCCTATCGTGAGTCGGTGGACAAGGCCAAGGAGTTCCTTGAGCAGATAAAAGCAAAGGGGTTTAGTACTCCCGTCAACAATCTTTATCGCTTTGAAGAACGGCACCTAACAAAAGCAGTCAAGGCAATCAAGATGTACAATGATCTCGTCAACAACACCACCGACAAGGATTTGAGAAAGGTCTTCTGCAAGTGGCGCATCTGTGGCCTCAAGAAAGAAGCATTGAGGATGTTCCTTGCTTTGGTAGATGATGGAGATGTAGACGAGGTCAAGGAGATTGTTAGGCCCACCCTTGAGACAGGCGTAGAATCCATGGTTGTAATACACACCTTCATTATTAAGGCCTACCTCAATGCTGGAAAGACCAAGGGAGCTCTCCAGGCCTACCGTGGCATGTTAGCTGCTGGGGTTGCCCCCAACTCCTACACTTACACTGTTTTAATCAAGGGACTCACTGCTGACCCCAACTTTTTTGAAGATGCCAAGAAGTGCTTGCTTGAGATGATGGACAAGGGGAGGCGGCCCAATGCTGCTACTTATACTGCAGTGATAGAGGCCTTTGCAAGGCAGGAGGACAAGGTAGCTGAGAAGGAGGGCAAAGACTTGGTGGAGTTGGTATATTTAATTCTTGGTGCATTCTTCTCTTCTCCTGAAACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

387

Amino Acids

43.23

Weight (kDa)

5.9

Isoelectric Point (pI)

23.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 81 - 129 1.4e-06 PPR repeat family
PPR_2 PF13041 274 - 319 4.2e-11 PPR repeat family
TPR_24 PF23276 276 - 360 4e-09 Fungal tetratrico peptide repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 251
AccB1I GGYRCC 1 cut(s) 606
AccI GTMKAC 1 cut(s) 765
AciI CCGC 2 cut(s) 354, 1024
AclWI GGATC 2 cut(s) 148, 161
AcoI YGGCCR 1 cut(s) 231
AcsI RAATTY 2 cut(s) 146, 178
AfaI GTAC 3 cut(s) 237, 571, 641
AfiI CCNNNNNNNGG 4 cut(s) 262, 473, 745, 1068
AflIII ACRYGT 1 cut(s) 49
AgsI TTSAA 3 cut(s) 166, 599, 980
AhlI ACTAGT 1 cut(s) 11
AjiI CACGTC 1 cut(s) 247
AjnI CCWGG 3 cut(s) 186, 472, 882
AjuI GAANNNNNNNTTGG 2 cut(s) 422, 454
AluBI AGCT 4 cut(s) 208, 878, 905, 1088
AluI AGCT 4 cut(s) 208, 878, 905, 1088
Alw21I GWGCWC 1 cut(s) 880
Alw26I GTCTC 1 cut(s) 794
AlwI GGATC 2 cut(s) 148, 161
ApeKI GCWGC 3 cut(s) 302, 905, 1034
ApoI RAATTY 2 cut(s) 146, 178
Asp700I GAANNNNTTC 1 cut(s) 62
AspLEI GCGC 1 cut(s) 702
AspS9I GGNCC 2 cut(s) 789, 1026
BamHI GGATCC 1 cut(s) 153
BanI GGYRCC 1 cut(s) 606
BanII GRGCYC 1 cut(s) 880
BbsI GAAGAC 2 cut(s) 396, 679
Bbv12I GWGCWC 1 cut(s) 880
BbvI GCAGC 3 cut(s) 289, 892, 1021
BccI CCATC 3 cut(s) 29, 749, 1003
BceAI ACGGC 2 cut(s) 218, 620
BciT130I CCWGG 3 cut(s) 188, 474, 884
BcoDI GTCTC 1 cut(s) 794
BcuI ACTAGT 1 cut(s) 11
BfaI CTAG 1 cut(s) 12
BfmI CTRYAG 1 cut(s) 1047
BglI GCCNNNNNGGC 1 cut(s) 293
BisI GCNGC 4 cut(s) 303, 906, 1025, 1035
BlsI GCNGC 4 cut(s) 304, 907, 1026, 1036
BmcAI AGTACT 1 cut(s) 571
Bme1390I CCNGG 3 cut(s) 188, 474, 884
BmgBI CACGTC 1 cut(s) 247
BmgT120I GGNCC 2 cut(s) 789, 1026
BmiI GGNNCC 2 cut(s) 155, 608
BmrFI CCNGG 3 cut(s) 188, 474, 884
BmsI GCATC 2 cut(s) 711, 973
BpiI GAAGAC 2 cut(s) 396, 679
BpmI CTGGAG 1 cut(s) 866
BpuEI CTTGAG 6 cut(s) 26, 293, 563, 698, 818, 1022
BsaJI CCNNGG 5 cut(s) 297, 531, 816, 870, 892
Bsc4I CCNNNNNNNGG 4 cut(s) 262, 473, 745, 1068
Bse118I RCCGGY 1 cut(s) 229
Bse1I ACTGG 1 cut(s) 340
Bse3DI GCAATG 1 cut(s) 501
BseBI CCWGG 3 cut(s) 188, 474, 884
BseDI CCNNGG 5 cut(s) 297, 531, 816, 870, 892
BseGI GGATG 3 cut(s) 342, 465, 738
BseLI CCNNNNNNNGG 4 cut(s) 262, 473, 745, 1068
BseMI GCAATG 1 cut(s) 501
BseMII CTCAG 1 cut(s) 1080
BseNI ACTGG 1 cut(s) 340
BseRI GAGGAG 1 cut(s) 83
BseX3I CGGCCG 1 cut(s) 231
BseXI GCAGC 3 cut(s) 289, 892, 1021
BseYI CCCAGC 1 cut(s) 908
Bsh1285I CGRYCG 1 cut(s) 234
BshNI GGYRCC 1 cut(s) 606
BsiEI CGRYCG 1 cut(s) 234
BsiHKAI GWGCWC 1 cut(s) 880
BsiSI CCGG 2 cut(s) 230, 288
BslFI GGGAC 2 cut(s) 140, 966
BslI CCNNNNNNNGG 4 cut(s) 262, 473, 745, 1068
BsmAI GTCTC 1 cut(s) 794
BsmFI GGGAC 2 cut(s) 140, 966
BsmI GAATGC 2 cut(s) 380, 1139
Bsp1286I GDGCHC 1 cut(s) 880
Bsp1407I TGTACA 1 cut(s) 639
Bsp143I GATC 2 cut(s) 153, 646
Bsp19I CCATGG 1 cut(s) 816
BspACI CCGC 2 cut(s) 354, 1024
BspCNI CTCAG 1 cut(s) 1081
BspLI GGNNCC 2 cut(s) 155, 608
BspMAI CTGCAG 1 cut(s) 1051
BspPI GGATC 2 cut(s) 148, 161
BspT107I GGYRCC 1 cut(s) 606
BsrDI GCAATG 1 cut(s) 501
BsrFI RCCGGY 1 cut(s) 229
BsrGI TGTACA 1 cut(s) 639
BsrI ACTGG 1 cut(s) 340
BssAI RCCGGY 1 cut(s) 229
BssECI CCNNGG 5 cut(s) 297, 531, 816, 870, 892
BssMI GATC 2 cut(s) 153, 646
BssT1I CCWWGG 4 cut(s) 297, 531, 816, 870
Bst2UI CCWGG 3 cut(s) 188, 474, 884
Bst4CI ACNGT 3 cut(s) 86, 893, 940
Bst6I CTCTTC 1 cut(s) 1153
BstAUI TGTACA 1 cut(s) 639
BstC8I GCNNGC 2 cut(s) 231, 998
BstDEI CTNAG 3 cut(s) 426, 1089, 1161
BstDSI CCRYGG 2 cut(s) 816, 892
BstENI CCTNNNNNAGG 1 cut(s) 1066
BstF5I GGATG 3 cut(s) 342, 465, 738
BstHHI GCGC 1 cut(s) 702
BstKTI GATC 2 cut(s) 156, 649
BstMAI GTCTC 1 cut(s) 794
BstMBI GATC 2 cut(s) 153, 646
BstMCI CGRYCG 1 cut(s) 234
BstNI CCWGG 3 cut(s) 188, 474, 884
BstNSI RCATGY 2 cut(s) 53, 901
BstSCI CCNGG 3 cut(s) 186, 472, 882
BstSFI CTRYAG 1 cut(s) 1047
BstV1I GCAGC 3 cut(s) 289, 892, 1021
BstV2I GAAGAC 2 cut(s) 396, 679
BstX2I RGATCY 1 cut(s) 153
BstYI RGATCY 1 cut(s) 153
BstZI CGGCCG 1 cut(s) 231
BtgI CCRYGG 2 cut(s) 816, 892
BtrI CACGTC 1 cut(s) 247
BtsCI GGATG 3 cut(s) 342, 465, 738
BtsI GCAGTG 2 cut(s) 957, 1056
BtsIMutI CAGTG 4 cut(s) 333, 936, 957, 1056
Cac8I GCNNGC 2 cut(s) 231, 998
CfoI GCGC 1 cut(s) 702
Cfr10I RCCGGY 1 cut(s) 229
Cfr13I GGNCC 2 cut(s) 789, 1026
Csp6I GTAC 3 cut(s) 236, 570, 640
CviAII CATG 4 cut(s) 50, 284, 817, 898
CviQI GTAC 3 cut(s) 236, 570, 640
DdeI CTNAG 3 cut(s) 426, 1089, 1161
DpnI GATC 2 cut(s) 155, 648
DpnII GATC 2 cut(s) 153, 646
DrdI GACNNNNNNGTC 1 cut(s) 251
DseDI GACNNNNNNGTC 1 cut(s) 251
EaeI YGGCCR 1 cut(s) 231
EagI CGGCCG 1 cut(s) 231
Eam1104I CTCTTC 1 cut(s) 1153
EarI CTCTTC 1 cut(s) 1153
Ecl136II GAGCTC 1 cut(s) 878
EclXI CGGCCG 1 cut(s) 231
Eco130I CCWWGG 4 cut(s) 297, 531, 816, 870
Eco147I AGGCCT 5 cut(s) 217, 314, 848, 887, 1061
Eco24I GRGCYC 1 cut(s) 880
Eco52I CGGCCG 1 cut(s) 231
Eco53kI GAGCTC 1 cut(s) 878
EcoICRI GAGCTC 1 cut(s) 878
EcoNI CCTNNNNNAGG 1 cut(s) 1066
EcoRII CCWGG 3 cut(s) 186, 472, 882
EcoT14I CCWWGG 4 cut(s) 297, 531, 816, 870
EcoT38I GRGCYC 1 cut(s) 880
ErhI CCWWGG 4 cut(s) 297, 531, 816, 870
FaeI CATG 4 cut(s) 53, 287, 820, 901
FalI AAGNNNNNCTT 2 cut(s) 980, 1012
FaqI GGGAC 2 cut(s) 140, 966
FatI CATG 4 cut(s) 49, 283, 816, 897
FblI GTMKAC 1 cut(s) 765
Fnu4HI GCNGC 4 cut(s) 303, 906, 1025, 1035
FokI GGATG 3 cut(s) 329, 472, 745
FriOI GRGCYC 1 cut(s) 880
Fsp4HI GCNGC 4 cut(s) 303, 906, 1025, 1035
FspBI CTAG 1 cut(s) 12
GlaI GCGC 1 cut(s) 701
GluI GCNGC 4 cut(s) 303, 906, 1025, 1035
GsaI CCCAGC 1 cut(s) 912
GsuI CTGGAG 1 cut(s) 866
HapII CCGG 2 cut(s) 230, 288
HhaI GCGC 1 cut(s) 702
Hin1II CATG 4 cut(s) 53, 287, 820, 901
Hin6I GCGC 1 cut(s) 700
HinP1I GCGC 1 cut(s) 700
HincII GTYRAC 2 cut(s) 580, 655
HindII GTYRAC 2 cut(s) 580, 655
HinfI GANTC 6 cut(s) 116, 392, 404, 515, 812, 954
HpaII CCGG 2 cut(s) 230, 288
Hpy166II GTNNAC 5 cut(s) 277, 523, 580, 655, 766
Hpy188I TCNGA 1 cut(s) 403
Hpy188III TCNNGA 5 cut(s) 43, 512, 634, 715, 1154
Hpy8I GTNNAC 5 cut(s) 277, 523, 580, 655, 766
HpyAV CCTTC 3 cut(s) 52, 844, 1087
HpyCH4III ACNGT 3 cut(s) 86, 893, 940
HpyCH4IV ACGT 1 cut(s) 246
HpyCH4V TGCA 5 cut(s) 368, 693, 1049, 1067, 1139
HpyF3I CTNAG 3 cut(s) 426, 1089, 1161
HpySE526I ACGT 1 cut(s) 246
Hsp92II CATG 4 cut(s) 53, 287, 820, 901
HspAI GCGC 1 cut(s) 700
KroI GCCGGC 1 cut(s) 229
KroNI GCCGGC 1 cut(s) 231
Kzo9I GATC 2 cut(s) 153, 646
LmnI GCTCC 1 cut(s) 875
Lsp1109I GCAGC 3 cut(s) 289, 892, 1021
LweI GCATC 2 cut(s) 711, 973
MaeI CTAG 1 cut(s) 12
MaeII ACGT 1 cut(s) 246
MalI GATC 2 cut(s) 155, 648
MboI GATC 2 cut(s) 153, 646
MboII GAAGA 7 cut(s) 390, 401, 611, 679, 992, 1135, 1140
MflI RGATCY 1 cut(s) 153
MhlI GDGCHC 1 cut(s) 880
MluCI AATT 6 cut(s) 22, 146, 166, 178, 409, 1128
MlyI GAGTC 4 cut(s) 110, 386, 524, 948
MmeI TCCRAC 1 cut(s) 429
MroNI GCCGGC 1 cut(s) 229
MroXI GAANNNNTTC 1 cut(s) 62
MseI TTAA 5 cut(s) 141, 495, 843, 944, 1127
MspI CCGG 2 cut(s) 230, 288
MspR9I CCNGG 3 cut(s) 188, 474, 884
Mva1269I GAATGC 2 cut(s) 380, 1139
MvaI CCWGG 3 cut(s) 188, 474, 884
NaeI GCCGGC 1 cut(s) 231
NcoI CCATGG 1 cut(s) 816
NdeII GATC 2 cut(s) 153, 646
NgoMIV GCCGGC 1 cut(s) 229
NlaIII CATG 4 cut(s) 53, 287, 820, 901
NlaIV GGNNCC 2 cut(s) 155, 608
NspI RCATGY 2 cut(s) 53, 901
PceI AGGCCT 5 cut(s) 217, 314, 848, 887, 1061
PciI ACATGT 1 cut(s) 49
PctI GAATGC 2 cut(s) 380, 1139
PdiI GCCGGC 1 cut(s) 231
PdmI GAANNNNTTC 1 cut(s) 62
PfeI GAWTC 2 cut(s) 404, 812
PflFI GACNNNGTC 1 cut(s) 770
PkrI GCNGC 4 cut(s) 304, 907, 1026, 1036
PleI GAGTC 4 cut(s) 110, 386, 523, 948
PpsI GAGTC 4 cut(s) 110, 386, 523, 948
PscI ACATGT 1 cut(s) 49
Psp124BI GAGCTC 1 cut(s) 880
Psp6I CCWGG 3 cut(s) 186, 472, 882
PspFI CCCAGC 1 cut(s) 908
PspGI CCWGG 3 cut(s) 186, 472, 882
PspN4I GGNNCC 2 cut(s) 155, 608
PspPI GGNCC 2 cut(s) 789, 1026
PstI CTGCAG 1 cut(s) 1051
PsuI RGATCY 1 cut(s) 153
PsyI GACNNNGTC 1 cut(s) 770
RsaI GTAC 3 cut(s) 237, 571, 641
RsaNI GTAC 3 cut(s) 236, 570, 640
SacI GAGCTC 1 cut(s) 880
SaqAI TTAA 5 cut(s) 141, 495, 843, 944, 1127
SatI GCNGC 4 cut(s) 303, 906, 1025, 1035
Sau3AI GATC 2 cut(s) 153, 646
Sau96I GGNCC 2 cut(s) 789, 1026
ScaI AGTACT 1 cut(s) 571
SchI GAGTC 4 cut(s) 110, 386, 524, 948
ScrFI CCNGG 3 cut(s) 188, 474, 884
SduI GDGCHC 1 cut(s) 880
SfaNI GCATC 2 cut(s) 711, 973
SfcI CTRYAG 1 cut(s) 1047
SmlI CTYRAG 6 cut(s) 41, 308, 542, 713, 797, 1001
SmoI CTYRAG 6 cut(s) 41, 308, 542, 713, 797, 1001
SpeI ACTAGT 1 cut(s) 11
Sse9I AATT 6 cut(s) 22, 146, 166, 178, 409, 1128
SseBI AGGCCT 5 cut(s) 217, 314, 848, 887, 1061
SsiI CCGC 2 cut(s) 354, 1024
SspI AATATT 1 cut(s) 111
SspMI CTAG 1 cut(s) 12
SstI GAGCTC 1 cut(s) 880
StuI AGGCCT 5 cut(s) 217, 314, 848, 887, 1061
StyD4I CCNGG 3 cut(s) 186, 472, 882
StyI CCWWGG 4 cut(s) 297, 531, 816, 870
TaaI ACNGT 3 cut(s) 86, 893, 940
TaiI ACGT 1 cut(s) 249
TaqI TCGA 1 cut(s) 66
TasI AATT 6 cut(s) 22, 146, 166, 178, 409, 1128
TatI WGTACW 2 cut(s) 569, 639
TauI GCSGC 1 cut(s) 1027
TfiI GAWTC 2 cut(s) 404, 812
Tru1I TTAA 5 cut(s) 141, 495, 843, 944, 1127
Tru9I TTAA 5 cut(s) 141, 495, 843, 944, 1127
TscAI CASTG 4 cut(s) 340, 943, 964, 1056
TseI GCWGC 3 cut(s) 302, 905, 1034
TspDTI ATGAA 5 cut(s) 71, 159, 210, 476, 826
TspRI CASTG 4 cut(s) 340, 943, 964, 1056
Tth111I GACNNNGTC 1 cut(s) 770
XagI CCTNNNNNAGG 1 cut(s) 1066
XapI RAATTY 2 cut(s) 146, 178
XceI RCATGY 2 cut(s) 53, 901
XcmI CCANNNNNNNNNTGG 1 cut(s) 890
XmiI GTMKAC 1 cut(s) 765
XmnI GAANNNNTTC 1 cut(s) 62
XspI CTAG 1 cut(s) 12
ZrmI AGTACT 1 cut(s) 571
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.