Rh7DG437500

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000101
Physical Location & Seq
Forward (+)
62318773 .. 62319810
1038 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG437500.1

Sequence Viewer

Length: 942 bp
ATGAATATTGGGGACTACGACTCCGTTAACGAGTATGCGATTAAGGTGTTCGATGCTATGGCAAATGACACCCTCGCTGAGGAAGCCAAAGAGCTGTTTAAGCCTCGCTCTGAGTCGGCAGTACTGCCTGACGTGGCCATCTACACCATTGTCATTTGGGCCTGCATCTGTTCCAGCAAGATCAAGGCTGCTCACAACGTCTACCTGTATATGATAGCTAACGGTGTCACCCCCACCTCCTGCACTTACATTATACTCATCAACACACTTGCAAATAACTCATCTTCTTATGTCAATTTTGTTCGGTATGCCAAGAAGTATTTTTTGGAAATGTTGGATAAGGGGATGACGCCTCCTTCATCTTCCTACATGGCCGTCTTCAAAGCCATTGCACGCCAGGAGCCGGTGGTGAAGGCCAAGGAGTTCCTTGAGCAGATACAAGCAAAGGGGTTCAGCCCTAAGTTGGACCGTAAGTGGAGCACCACCCGCAAACCCCTCAGGGATGAGTTTCCGAAGATGTTCAAAGCCTTGAAAGCTGATGGCAATCATGACCAGGCCATGGAGCTCTATAGGCGCGGTTGGGATACAAACACAATTCCAGCGGTCGTACTTCACACCGGTGTTATTGAAGACTGTCTCGAGGCTGGAAATACCGAGTGTGCTCTGAAGGCTTACCGGACCATGTTAGTTACTGGGGTTGCCCTAAACTCCTATACATACGCTGTTTTAATTAAGGGACTCACTACTGACCCCAATTTCTGTGGGGATGCCAAGAGGTGCTTGCTTGAGATGATGGAGAGGGGGATGAGACCCAATGCTGCTACATACACTGCGGTGATTGAGGGATTTGTGAAGCAGGAGGACAAGGTAGCTGAGGAGGAGGGCAAACAGTTGGTGGAGGTGATGATGGGCAACGGGTTTGTGCCAAATGCAAAGGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

313

Amino Acids

34.94

Weight (kDa)

6.84

Isoelectric Point (pI)

37.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 43 - 92 2e-09 PPR repeat family
PPR_2 PF13041 201 - 247 4e-06 PPR repeat family
PPR_long PF17177 208 - 309 4.6e-06 Pentacotripeptide-repeat region of PRORP
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 559
AccI GTMKAC 1 cut(s) 201
AccII CGCG 1 cut(s) 576
AciI CCGC 4 cut(s) 487, 576, 602, 833
AcoI YGGCCR 2 cut(s) 135, 372
AcuI CTGAAG 1 cut(s) 686
AcyI GRCGYC 1 cut(s) 350
AfaI GTAC 2 cut(s) 123, 609
AfiI CCNNNNNNNGG 4 cut(s) 79, 403, 463, 559
AgeI ACCGGT 1 cut(s) 617
AgsI TTSAA 4 cut(s) 382, 523, 532, 629
AjiI CACGTC 1 cut(s) 133
AjnI CCWGG 2 cut(s) 396, 552
AjuI GAANNNNNNNTTGG 2 cut(s) 308, 340
AleI CACNNNNGTG 2 cut(s) 618, 833
AluBI AGCT 5 cut(s) 94, 218, 536, 565, 872
AluI AGCT 5 cut(s) 94, 218, 536, 565, 872
Alw21I GWGCWC 3 cut(s) 482, 567, 664
Alw26I GTCTC 2 cut(s) 641, 802
Ama87I CYCGRG 1 cut(s) 638
AoxI GGCC 5 cut(s) 135, 159, 372, 414, 555
ApeKI GCWGC 2 cut(s) 188, 818
AsiGI ACCGGT 1 cut(s) 617
Asp700I GAANNNNTTC 1 cut(s) 518
AspLEI GCGC 1 cut(s) 576
AspS9I GGNCC 3 cut(s) 159, 466, 678
AsuHPI GGTGA 4 cut(s) 220, 421, 847, 913
AvaI CYCGRG 1 cut(s) 638
AvaII GGWCC 2 cut(s) 466, 678
AxyI CCTNAGG 1 cut(s) 497
BalI TGGCCA 1 cut(s) 137
BanII GRGCYC 1 cut(s) 567
BbsI GAAGAC 2 cut(s) 370, 636
Bbv12I GWGCWC 3 cut(s) 482, 567, 664
BbvCI CCTCAGC 2 cut(s) 78, 873
BbvI GCAGC 2 cut(s) 175, 805
BccI CCATC 4 cut(s) 146, 533, 787, 901
BceAI ACGGC 1 cut(s) 359
BciT130I CCWGG 2 cut(s) 398, 554
BciVI GTATCC 1 cut(s) 577
BcoDI GTCTC 2 cut(s) 641, 802
BfmI CTRYAG 1 cut(s) 568
BfuI GTATCC 1 cut(s) 577
BisI GCNGC 2 cut(s) 189, 819
BlsI GCNGC 2 cut(s) 190, 820
BmcAI AGTACT 1 cut(s) 123
Bme1390I CCNGG 2 cut(s) 398, 554
Bme18I GGWCC 2 cut(s) 466, 678
BmeT110I CYCGRG 1 cut(s) 638
BmgBI CACGTC 1 cut(s) 133
BmgT120I GGNCC 3 cut(s) 159, 466, 678
BmiI GGNNCC 1 cut(s) 402
BmrFI CCNGG 2 cut(s) 398, 554
BmrI ACTGGG 1 cut(s) 702
BmsI GCATC 3 cut(s) 43, 174, 757
BmuI ACTGGG 1 cut(s) 702
BpiI GAAGAC 2 cut(s) 370, 636
Bpu10I CCTNAGC 2 cut(s) 78, 873
BpuEI CTTGAG 2 cut(s) 449, 806
BsaBI GATNNNNATC 1 cut(s) 543
BsaHI GRCGYC 1 cut(s) 350
BsaI GGTCTC 1 cut(s) 802
BsaJI CCNNGG 2 cut(s) 417, 558
BsaWI WCCGGW 2 cut(s) 617, 675
BsaXI ACNNNNNCTCC 2 cut(s) 5, 35
Bsc4I CCNNNNNNNGG 4 cut(s) 79, 403, 463, 559
Bse118I RCCGGY 2 cut(s) 403, 617
Bse1I ACTGG 1 cut(s) 697
Bse21I CCTNAGG 1 cut(s) 497
Bse3DI GCAATG 1 cut(s) 387
Bse8I GATNNNNATC 1 cut(s) 543
BseBI CCWGG 2 cut(s) 398, 554
BseDI CCNNGG 2 cut(s) 417, 558
BseGI GGATG 4 cut(s) 351, 508, 772, 810
BseJI GATNNNNATC 1 cut(s) 543
BseLI CCNNNNNNNGG 4 cut(s) 79, 403, 463, 559
BseMI GCAATG 1 cut(s) 387
BseMII CTCAG 4 cut(s) 69, 102, 511, 864
BseNI ACTGG 1 cut(s) 697
BseRI GAGGAG 2 cut(s) 890, 893
BseXI GCAGC 2 cut(s) 175, 805
BsgI GTGCAG 1 cut(s) 226
Bsh1236I CGCG 1 cut(s) 576
Bsh1285I CGRYCG 1 cut(s) 606
BshFI GGCC 5 cut(s) 137, 161, 374, 416, 557
BshTI ACCGGT 1 cut(s) 617
BsiEI CGRYCG 1 cut(s) 606
BsiHKAI GWGCWC 3 cut(s) 482, 567, 664
BsiHKCI CYCGRG 1 cut(s) 638
BsiSI CCGG 3 cut(s) 404, 618, 676
BslFI GGGAC 2 cut(s) 26, 750
BslI CCNNNNNNNGG 4 cut(s) 79, 403, 463, 559
BsmAI GTCTC 2 cut(s) 641, 802
BsmFI GGGAC 2 cut(s) 26, 750
BsnI GGCC 5 cut(s) 137, 161, 374, 416, 557
Bso31I GGTCTC 1 cut(s) 802
BsoBI CYCGRG 1 cut(s) 638
Bsp1286I GDGCHC 3 cut(s) 482, 567, 664
Bsp143I GATC 1 cut(s) 180
Bsp19I CCATGG 1 cut(s) 558
BspACI CCGC 4 cut(s) 487, 576, 602, 833
BspANI GGCC 5 cut(s) 137, 161, 374, 416, 557
BspCNI CTCAG 4 cut(s) 70, 103, 510, 865
BspFNI CGCG 1 cut(s) 576
BspHI TCATGA 1 cut(s) 547
BspLI GGNNCC 1 cut(s) 402
BspTNI GGTCTC 1 cut(s) 802
BsrDI GCAATG 1 cut(s) 387
BsrFI RCCGGY 2 cut(s) 403, 617
BsrI ACTGG 1 cut(s) 697
BssAI RCCGGY 2 cut(s) 403, 617
BssECI CCNNGG 2 cut(s) 417, 558
BssMI GATC 1 cut(s) 180
BssNI GRCGYC 1 cut(s) 350
BssT1I CCWWGG 2 cut(s) 417, 558
Bst2UI CCWGG 2 cut(s) 398, 554
Bst4CI ACNGT 4 cut(s) 224, 470, 635, 891
BstACI GRCGYC 1 cut(s) 350
BstC8I GCNNGC 3 cut(s) 163, 394, 782
BstDEI CTNAG 5 cut(s) 78, 111, 459, 497, 873
BstDSI CCRYGG 1 cut(s) 558
BstENI CCTNNNNNAGG 1 cut(s) 77
BstF5I GGATG 4 cut(s) 351, 508, 772, 810
BstFNI CGCG 1 cut(s) 576
BstHHI GCGC 1 cut(s) 576
BstKTI GATC 1 cut(s) 183
BstMAI GTCTC 2 cut(s) 641, 802
BstMBI GATC 1 cut(s) 180
BstMCI CGRYCG 1 cut(s) 606
BstMWI GCNNNNNNNGC 6 cut(s) 83, 100, 486, 533, 571, 668
BstNI CCWGG 2 cut(s) 398, 554
BstSCI CCNGG 2 cut(s) 396, 552
BstSFI CTRYAG 1 cut(s) 568
BstUI CGCG 1 cut(s) 576
BstV1I GCAGC 2 cut(s) 175, 805
BstV2I GAAGAC 2 cut(s) 370, 636
Bsu36I CCTNAGG 1 cut(s) 497
BsuI GTATCC 1 cut(s) 577
BsuRI GGCC 5 cut(s) 137, 161, 374, 416, 557
BtgI CCRYGG 1 cut(s) 558
BtrI CACGTC 1 cut(s) 133
BtsCI GGATG 4 cut(s) 351, 508, 772, 810
BtsI GCAGTG 1 cut(s) 828
BtsIMutI CAGTG 1 cut(s) 828
Cac8I GCNNGC 3 cut(s) 163, 394, 782
CciI TCATGA 1 cut(s) 547
CfoI GCGC 1 cut(s) 576
Cfr10I RCCGGY 2 cut(s) 403, 617
Cfr13I GGNCC 3 cut(s) 159, 466, 678
CseI GACGC 1 cut(s) 358
Csp6I GTAC 2 cut(s) 122, 608
CspAI ACCGGT 1 cut(s) 617
CspCI CAANNNNNGTGG 2 cut(s) 742, 777
CviAII CATG 5 cut(s) 370, 548, 559, 682, 939
CviQI GTAC 2 cut(s) 122, 608
DdeI CTNAG 5 cut(s) 78, 111, 459, 497, 873
DpnI GATC 1 cut(s) 182
DpnII GATC 1 cut(s) 180
EaeI YGGCCR 2 cut(s) 135, 372
Ecl136II GAGCTC 1 cut(s) 565
Eco130I CCWWGG 2 cut(s) 417, 558
Eco24I GRGCYC 1 cut(s) 567
Eco31I GGTCTC 1 cut(s) 802
Eco47I GGWCC 2 cut(s) 466, 678
Eco53kI GAGCTC 1 cut(s) 565
Eco57I CTGAAG 1 cut(s) 686
Eco81I CCTNAGG 1 cut(s) 497
Eco88I CYCGRG 1 cut(s) 638
EcoICRI GAGCTC 1 cut(s) 565
EcoNI CCTNNNNNAGG 1 cut(s) 77
EcoRII CCWGG 2 cut(s) 396, 552
EcoT14I CCWWGG 2 cut(s) 417, 558
EcoT38I GRGCYC 1 cut(s) 567
ErhI CCWWGG 2 cut(s) 417, 558
FaeI CATG 5 cut(s) 373, 551, 562, 685, 942
FalI AAGNNNNNCTT 2 cut(s) 764, 796
FaqI GGGAC 2 cut(s) 26, 750
FatI CATG 5 cut(s) 369, 547, 558, 681, 938
FauI CCCGC 1 cut(s) 494
FblI GTMKAC 1 cut(s) 201
Fnu4HI GCNGC 2 cut(s) 189, 819
FokI GGATG 4 cut(s) 358, 515, 779, 817
FriOI GRGCYC 1 cut(s) 567
Fsp4HI GCNGC 2 cut(s) 189, 819
GlaI GCGC 1 cut(s) 575
GluI GCNGC 2 cut(s) 189, 819
HaeIII GGCC 5 cut(s) 137, 161, 374, 416, 557
HapII CCGG 3 cut(s) 404, 618, 676
HgaI GACGC 1 cut(s) 358
HhaI GCGC 1 cut(s) 576
Hin1I GRCGYC 1 cut(s) 350
Hin1II CATG 5 cut(s) 373, 551, 562, 685, 942
Hin6I GCGC 1 cut(s) 574
HinP1I GCGC 1 cut(s) 574
HincII GTYRAC 1 cut(s) 28
HindII GTYRAC 1 cut(s) 28
HinfI GANTC 3 cut(s) 20, 113, 738
HpaI GTTAAC 1 cut(s) 28
HpaII CCGG 3 cut(s) 404, 618, 676
HphI GGTGA 4 cut(s) 220, 421, 847, 913
Hpy166II GTNNAC 2 cut(s) 28, 202
Hpy188I TCNGA 3 cut(s) 112, 513, 666
Hpy188III TCNNGA 2 cut(s) 548, 638
Hpy8I GTNNAC 2 cut(s) 28, 202
HpyAV CCTTC 3 cut(s) 366, 406, 661
HpyCH4III ACNGT 4 cut(s) 224, 470, 635, 891
HpyCH4IV ACGT 2 cut(s) 132, 198
HpyCH4V TGCA 5 cut(s) 165, 243, 272, 392, 932
HpyF10VI GCNNNNNNNGC 6 cut(s) 83, 100, 486, 533, 571, 668
HpyF3I CTNAG 5 cut(s) 78, 111, 459, 497, 873
HpySE526I ACGT 2 cut(s) 132, 198
Hsp92I GRCGYC 1 cut(s) 350
Hsp92II CATG 5 cut(s) 373, 551, 562, 685, 942
HspAI GCGC 1 cut(s) 574
KspAI GTTAAC 1 cut(s) 28
Kzo9I GATC 1 cut(s) 180
LmnI GCTCC 3 cut(s) 400, 477, 562
Lsp1109I GCAGC 2 cut(s) 175, 805
LweI GCATC 3 cut(s) 43, 174, 757
MaeII ACGT 2 cut(s) 132, 198
MaeIII GTNAC 2 cut(s) 226, 688
MalI GATC 1 cut(s) 182
MboI GATC 1 cut(s) 180
MboII GAAGA 5 cut(s) 276, 354, 370, 526, 641
MhlI GDGCHC 3 cut(s) 482, 567, 664
MlsI TGGCCA 1 cut(s) 137
MluCI AATT 4 cut(s) 295, 594, 729, 754
MluNI TGGCCA 1 cut(s) 137
MlyI GAGTC 3 cut(s) 14, 122, 732
MmeI TCCRAC 2 cut(s) 315, 444
Mox20I TGGCCA 1 cut(s) 137
MroXI GAANNNNTTC 1 cut(s) 518
MscI TGGCCA 1 cut(s) 137
MseI TTAA 5 cut(s) 27, 42, 99, 728, 732
MslI CAYNNNNRTG 2 cut(s) 618, 833
Msp20I TGGCCA 1 cut(s) 137
MspA1I CMGCKG 1 cut(s) 602
MspI CCGG 3 cut(s) 404, 618, 676
MspR9I CCNGG 2 cut(s) 398, 554
MvaI CCWGG 2 cut(s) 398, 554
MvnI CGCG 1 cut(s) 576
MwoI GCNNNNNNNGC 6 cut(s) 83, 100, 486, 533, 571, 668
NcoI CCATGG 1 cut(s) 558
NdeII GATC 1 cut(s) 180
NlaIII CATG 5 cut(s) 373, 551, 562, 685, 942
NlaIV GGNNCC 1 cut(s) 402
NmuCI GTSAC 1 cut(s) 226
OliI CACNNNNGTG 2 cut(s) 618, 833
PacI TTAATTAA 1 cut(s) 732
PaeR7I CTCGAG 1 cut(s) 638
PagI TCATGA 1 cut(s) 547
PdmI GAANNNNTTC 1 cut(s) 518
PflMI CCANNNNNTGG 1 cut(s) 559
PinAI ACCGGT 1 cut(s) 617
PkrI GCNGC 2 cut(s) 190, 820
PleI GAGTC 3 cut(s) 14, 121, 732
PpsI GAGTC 3 cut(s) 14, 121, 732
Psp124BI GAGCTC 1 cut(s) 567
Psp6I CCWGG 2 cut(s) 396, 552
PspGI CCWGG 2 cut(s) 396, 552
PspN4I GGNNCC 1 cut(s) 402
PspPI GGNCC 3 cut(s) 159, 466, 678
RsaI GTAC 2 cut(s) 123, 609
RsaNI GTAC 2 cut(s) 122, 608
RseI CAYNNNNRTG 2 cut(s) 618, 833
SacI GAGCTC 1 cut(s) 567
SaqAI TTAA 5 cut(s) 27, 42, 99, 728, 732
SatI GCNGC 2 cut(s) 189, 819
Sau3AI GATC 1 cut(s) 180
Sau96I GGNCC 3 cut(s) 159, 466, 678
ScaI AGTACT 1 cut(s) 123
SchI GAGTC 3 cut(s) 14, 122, 732
ScrFI CCNGG 2 cut(s) 398, 554
SduI GDGCHC 3 cut(s) 482, 567, 664
SfaNI GCATC 3 cut(s) 43, 174, 757
SfcI CTRYAG 1 cut(s) 568
Sfr274I CTCGAG 1 cut(s) 638
SgrAI CRCCGGYG 1 cut(s) 617
SinI GGWCC 2 cut(s) 466, 678
SlaI CTCGAG 1 cut(s) 638
SmiMI CAYNNNNRTG 2 cut(s) 618, 833
SmlI CTYRAG 3 cut(s) 428, 638, 785
SmoI CTYRAG 3 cut(s) 428, 638, 785
Sse9I AATT 4 cut(s) 295, 594, 729, 754
SsiI CCGC 4 cut(s) 487, 576, 602, 833
SspI AATATT 1 cut(s) 7
SstI GAGCTC 1 cut(s) 567
StyD4I CCNGG 2 cut(s) 396, 552
StyI CCWWGG 2 cut(s) 417, 558
TaaI ACNGT 4 cut(s) 224, 470, 635, 891
TaiI ACGT 2 cut(s) 135, 201
TaqI TCGA 2 cut(s) 51, 639
TasI AATT 4 cut(s) 295, 594, 729, 754
TatI WGTACW 1 cut(s) 121
Tru1I TTAA 5 cut(s) 27, 42, 99, 728, 732
Tru9I TTAA 5 cut(s) 27, 42, 99, 728, 732
TscAI CASTG 1 cut(s) 835
TseFI GTSAC 1 cut(s) 226
TseI GCWGC 2 cut(s) 188, 818
Tsp45I GTSAC 1 cut(s) 226
TspDTI ATGAA 2 cut(s) 17, 348
TspGWI ACGGA 1 cut(s) 13
TspRI CASTG 1 cut(s) 835
Van91I CCANNNNNTGG 1 cut(s) 559
VpaK11BI GGWCC 2 cut(s) 466, 678
XagI CCTNNNNNAGG 1 cut(s) 77
XhoI CTCGAG 1 cut(s) 638
XmiI GTMKAC 1 cut(s) 201
XmnI GAANNNNTTC 1 cut(s) 518
ZrmI AGTACT 1 cut(s) 123
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.