Rorug07G0298100

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000101
Physical Location & Seq
Forward (+)
29446984 .. 29448083
1100 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0298100.1

Sequence Viewer

Length: 672 bp
ATGGGTGGATGCTTCTCCGTGACCGCTTTTGAACCTTCTCTTCATTCTTCGTCTCCCACCGCCAAGGTTGTCTCCGCGAACGGAAGTCTCATAGAATACCCTGTTCCCGTTTCCGTCTCGCAAGTCCTCACGGTCGAGAAGGCAGCTTCTCCCTCTTCCTCCACGGCGTCGTTTTTCGTCTGCAACTCCGACCGGTTTAACTACGACTCTTATATTCCTGCTTTGGTTTCGGACCACCAACTCGAGGCTGATCAGATCTACTTCGTACTCCCGGTTGCTAAGCTCCAGCGGCGGCTGACTGCCTCGGATATGGCCGCTTTGGCTGTCAGGGCCAGCCTCGCCCTCCAAAATGCGTCCACGGCTTCTTCCTCGGGAAAAAAGGAACGTACTCGTCGCCGGAACAAGAACCGGGTTTCTCCCATTCTCGTTGTCAAGTCGGAGCCCAGATCGGAGTACGATTTTGTGGATTACGAGGCTGATTTTACGATTGGGCCCTCCAATTCTCTTATGAAGAAGAAGGTGATGGCGCCGGAGAAGGCTGCTTTGGGGGTTTCGAGATCTGGGTCCGTCCGGAAGTTGCAGAGATACTCATCTAAAAGAGTATTGAAGAGGGCCGTTCGGTCGTTTAAACTCAGATTGACCCCAATACAAGAAGGTACCGAGGTATTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

223

Amino Acids

24.4

Weight (kDa)

9.93

Isoelectric Point (pI)

60.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PADRE PF14009 1 - 218 5e-29 PADRE domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 656
AccB1I GGYRCC 2 cut(s) 526, 656
AccII CGCG 1 cut(s) 77
AccIII TCCGGA 1 cut(s) 570
AciI CCGC 6 cut(s) 24, 60, 75, 289, 292, 315
AcoI YGGCCR 1 cut(s) 312
AcyI GRCGYC 2 cut(s) 167, 527
AfaI GTAC 4 cut(s) 267, 388, 455, 658
AfiI CCNNNNNNNGG 1 cut(s) 244
AgeI ACCGGT 1 cut(s) 192
AgsI TTSAA 2 cut(s) 32, 607
AjuI GAANNNNNNNTTGG 2 cut(s) 527, 559
AluBI AGCT 2 cut(s) 146, 283
AluI AGCT 2 cut(s) 146, 283
Alw26I GTCTC 4 cut(s) 57, 76, 92, 121
Ama87I CYCGRG 2 cut(s) 242, 370
Aor13HI TCCGGA 1 cut(s) 570
AoxI GGCC 4 cut(s) 312, 330, 491, 612
ApaI GGGCCC 1 cut(s) 495
ApeKI GCWGC 2 cut(s) 143, 539
AsiGI ACCGGT 1 cut(s) 192
Asp718I GGTACC 1 cut(s) 656
AspLEI GCGC 1 cut(s) 529
AspS9I GGNCC 6 cut(s) 232, 330, 491, 492, 564, 612
AsuC2I CCSGG 2 cut(s) 272, 410
AsuHPI GGTGA 1 cut(s) 532
AvaI CYCGRG 2 cut(s) 242, 370
AvaII GGWCC 2 cut(s) 232, 564
BaeGI GKGCMC 1 cut(s) 495
BaeI ACNNNNGTAYC 1 cut(s) 648
BanI GGYRCC 2 cut(s) 526, 656
BanII GRGCYC 2 cut(s) 444, 495
BbvI GCAGC 2 cut(s) 155, 526
BccI CCATC 1 cut(s) 517
BceAI ACGGC 3 cut(s) 180, 375, 599
BclI TGATCA 1 cut(s) 250
BcnI CCSGG 2 cut(s) 272, 410
BcoDI GTCTC 4 cut(s) 57, 76, 92, 121
BfoI RGCGCY 1 cut(s) 530
BglI GCCNNNNNGGC 1 cut(s) 320
BglII AGATCT 2 cut(s) 255, 557
BisI GCNGC 5 cut(s) 144, 290, 293, 315, 540
BlpI GCTNAGC 1 cut(s) 279
BlsI GCNGC 5 cut(s) 145, 291, 294, 316, 541
Bme1390I CCNGG 2 cut(s) 272, 410
Bme18I GGWCC 2 cut(s) 232, 564
BmeT110I CYCGRG 2 cut(s) 242, 370
BmgT120I GGNCC 6 cut(s) 232, 330, 491, 492, 564, 612
BmiI GGNNCC 5 cut(s) 441, 493, 528, 565, 658
BmrFI CCNGG 2 cut(s) 272, 410
BpmI CTGGAG 1 cut(s) 269
Bpu1102I GCTNAGC 1 cut(s) 279
BpuMI CCSGG 2 cut(s) 272, 410
BsaBI GATNNNNATC 1 cut(s) 589
BsaHI GRCGYC 2 cut(s) 167, 527
BsaJI CCNNGG 6 cut(s) 63, 162, 303, 357, 369, 660
BsaWI WCCGGW 2 cut(s) 192, 570
Bsc4I CCNNNNNNNGG 1 cut(s) 244
Bse118I RCCGGY 1 cut(s) 192
Bse8I GATNNNNATC 1 cut(s) 589
BseAI TCCGGA 1 cut(s) 570
BseDI CCNNGG 6 cut(s) 63, 162, 303, 357, 369, 660
BseGI GGATG 1 cut(s) 14
BseJI GATNNNNATC 1 cut(s) 589
BseLI CCNNNNNNNGG 1 cut(s) 244
BseMII CTCAG 1 cut(s) 646
BseSI GKGCMC 1 cut(s) 495
BseXI GCAGC 2 cut(s) 155, 526
Bsh1236I CGCG 1 cut(s) 77
Bsh1285I CGRYCG 3 cut(s) 135, 193, 623
BshFI GGCC 4 cut(s) 314, 332, 493, 614
BshNI GGYRCC 2 cut(s) 526, 656
BshTI ACCGGT 1 cut(s) 192
BsiEI CGRYCG 3 cut(s) 135, 193, 623
BsiHKCI CYCGRG 2 cut(s) 242, 370
BsiSI CCGG 6 cut(s) 193, 272, 397, 409, 530, 571
BslI CCNNNNNNNGG 1 cut(s) 244
BsmAI GTCTC 4 cut(s) 57, 76, 92, 121
BsmBI CGTCTC 2 cut(s) 57, 121
BsnI GGCC 4 cut(s) 314, 332, 493, 614
BsoBI CYCGRG 2 cut(s) 242, 370
Bsp120I GGGCCC 1 cut(s) 491
Bsp1286I GDGCHC 2 cut(s) 444, 495
Bsp13I TCCGGA 1 cut(s) 570
Bsp143I GATC 4 cut(s) 250, 255, 446, 557
Bsp1720I GCTNAGC 1 cut(s) 279
BspACI CCGC 6 cut(s) 24, 60, 75, 289, 292, 315
BspANI GGCC 4 cut(s) 314, 332, 493, 614
BspCNI CTCAG 1 cut(s) 645
BspEI TCCGGA 1 cut(s) 570
BspFNI CGCG 1 cut(s) 77
BspLI GGNNCC 5 cut(s) 441, 493, 528, 565, 658
BspT107I GGYRCC 2 cut(s) 526, 656
BsrFI RCCGGY 1 cut(s) 192
BssAI RCCGGY 1 cut(s) 192
BssECI CCNNGG 6 cut(s) 63, 162, 303, 357, 369, 660
BssMI GATC 4 cut(s) 250, 255, 446, 557
BssNI GRCGYC 2 cut(s) 167, 527
BssT1I CCWWGG 1 cut(s) 63
Bst4CI ACNGT 1 cut(s) 133
Bst6I CTCTTC 3 cut(s) 45, 160, 602
BstACI GRCGYC 2 cut(s) 167, 527
BstC8I GCNNGC 1 cut(s) 334
BstDEI CTNAG 2 cut(s) 279, 632
BstDSI CCRYGG 2 cut(s) 162, 357
BstF5I GGATG 1 cut(s) 14
BstFNI CGCG 1 cut(s) 77
BstH2I RGCGCY 1 cut(s) 530
BstHHI GCGC 1 cut(s) 529
BstKTI GATC 4 cut(s) 253, 258, 449, 560
BstMAI GTCTC 4 cut(s) 57, 76, 92, 121
BstMBI GATC 4 cut(s) 250, 255, 446, 557
BstMCI CGRYCG 3 cut(s) 135, 193, 623
BstMWI GCNNNNNNNGC 5 cut(s) 289, 320, 329, 338, 359
BstSCI CCNGG 2 cut(s) 270, 408
BstSLI GKGCMC 1 cut(s) 495
BstUI CGCG 1 cut(s) 77
BstV1I GCAGC 2 cut(s) 155, 526
BstX2I RGATCY 2 cut(s) 255, 557
BstYI RGATCY 2 cut(s) 255, 557
BsuRI GGCC 4 cut(s) 314, 332, 493, 614
BtgI CCRYGG 2 cut(s) 162, 357
BtsCI GGATG 1 cut(s) 14
Cac8I GCNNGC 1 cut(s) 334
CfoI GCGC 1 cut(s) 529
Cfr10I RCCGGY 1 cut(s) 192
Cfr13I GGNCC 6 cut(s) 232, 330, 491, 492, 564, 612
CseI GACGC 2 cut(s) 156, 342
Csp6I GTAC 4 cut(s) 266, 387, 454, 657
CspAI ACCGGT 1 cut(s) 192
CviQI GTAC 4 cut(s) 266, 387, 454, 657
DdeI CTNAG 2 cut(s) 279, 632
DinI GGCGCC 1 cut(s) 528
DpnI GATC 4 cut(s) 252, 257, 448, 559
DpnII GATC 4 cut(s) 250, 255, 446, 557
DraI TTTAAA 1 cut(s) 628
EaeI YGGCCR 1 cut(s) 312
Eam1104I CTCTTC 3 cut(s) 45, 160, 602
EarI CTCTTC 3 cut(s) 45, 160, 602
Eco130I CCWWGG 1 cut(s) 63
Eco24I GRGCYC 2 cut(s) 444, 495
Eco47I GGWCC 2 cut(s) 232, 564
Eco88I CYCGRG 2 cut(s) 242, 370
EcoO109I RGGNCCY 1 cut(s) 492
EcoT14I CCWWGG 1 cut(s) 63
EcoT38I GRGCYC 2 cut(s) 444, 495
EgeI GGCGCC 1 cut(s) 528
EheI GGCGCC 1 cut(s) 528
ErhI CCWWGG 1 cut(s) 63
Esp3I CGTCTC 2 cut(s) 57, 121
FaiI YATR 4 cut(s) 92, 213, 311, 509
FbaI TGATCA 1 cut(s) 250
Fnu4HI GCNGC 5 cut(s) 144, 290, 293, 315, 540
FokI GGATG 1 cut(s) 21
FriOI GRGCYC 2 cut(s) 444, 495
Fsp4HI GCNGC 5 cut(s) 144, 290, 293, 315, 540
GlaI GCGC 1 cut(s) 528
GluI GCNGC 5 cut(s) 144, 290, 293, 315, 540
GsuI CTGGAG 1 cut(s) 269
HaeII RGCGCY 1 cut(s) 530
HaeIII GGCC 4 cut(s) 314, 332, 493, 614
HapII CCGG 6 cut(s) 193, 272, 397, 409, 530, 571
HgaI GACGC 2 cut(s) 156, 342
HhaI GCGC 1 cut(s) 529
Hin1I GRCGYC 2 cut(s) 167, 527
Hin6I GCGC 1 cut(s) 527
HinP1I GCGC 1 cut(s) 527
HinfI GANTC 1 cut(s) 206
HpaII CCGG 6 cut(s) 193, 272, 397, 409, 530, 571
HphI GGTGA 1 cut(s) 532
Hpy166II GTNNAC 1 cut(s) 357
Hpy188I TCNGA 7 cut(s) 190, 232, 255, 307, 439, 451, 635
Hpy188III TCNNGA 4 cut(s) 136, 372, 555, 571
Hpy8I GTNNAC 1 cut(s) 357
Hpy99I CGWCG 2 cut(s) 172, 396
HpyAV CCTTC 5 cut(s) 45, 133, 511, 529, 647
HpyCH4III ACNGT 1 cut(s) 133
HpyCH4IV ACGT 1 cut(s) 385
HpyCH4V TGCA 2 cut(s) 183, 580
HpyF10VI GCNNNNNNNGC 5 cut(s) 289, 320, 329, 338, 359
HpyF3I CTNAG 2 cut(s) 279, 632
HpySE526I ACGT 1 cut(s) 385
Hsp92I GRCGYC 2 cut(s) 167, 527
HspAI GCGC 1 cut(s) 527
KasI GGCGCC 1 cut(s) 526
Kpn2I TCCGGA 1 cut(s) 570
KpnI GGTACC 1 cut(s) 660
Ksp22I TGATCA 1 cut(s) 250
Kzo9I GATC 4 cut(s) 250, 255, 446, 557
LmnI GCTCC 2 cut(s) 288, 439
Lsp1109I GCAGC 2 cut(s) 155, 526
MaeII ACGT 1 cut(s) 385
MaeIII GTNAC 1 cut(s) 19
MalI GATC 4 cut(s) 252, 257, 448, 559
MboI GATC 4 cut(s) 250, 255, 446, 557
MboII GAAGA 7 cut(s) 32, 39, 147, 357, 523, 526, 619
MflI RGATCY 2 cut(s) 255, 557
MhlI GDGCHC 2 cut(s) 444, 495
MluCI AATT 1 cut(s) 499
Mly113I GGCGCC 1 cut(s) 527
MlyI GAGTC 1 cut(s) 200
MmeI TCCRAC 2 cut(s) 213, 417
MroI TCCGGA 1 cut(s) 570
MseI TTAA 2 cut(s) 198, 627
MspA1I CMGCKG 1 cut(s) 289
MspI CCGG 6 cut(s) 193, 272, 397, 409, 530, 571
MspR9I CCNGG 2 cut(s) 272, 410
MssI GTTTAAAC 1 cut(s) 628
MvnI CGCG 1 cut(s) 77
MwoI GCNNNNNNNGC 5 cut(s) 289, 320, 329, 338, 359
NarI GGCGCC 1 cut(s) 527
NciI CCSGG 2 cut(s) 272, 410
NdeII GATC 4 cut(s) 250, 255, 446, 557
NlaIV GGNNCC 5 cut(s) 441, 493, 528, 565, 658
NmuCI GTSAC 1 cut(s) 19
PaeR7I CTCGAG 1 cut(s) 242
PinAI ACCGGT 1 cut(s) 192
PkrI GCNGC 5 cut(s) 145, 291, 294, 316, 541
PleI GAGTC 1 cut(s) 200
PluTI GGCGCC 1 cut(s) 530
PmeI GTTTAAAC 1 cut(s) 628
PpsI GAGTC 1 cut(s) 200
PspN4I GGNNCC 5 cut(s) 441, 493, 528, 565, 658
PspOMI GGGCCC 1 cut(s) 491
PspPI GGNCC 6 cut(s) 232, 330, 491, 492, 564, 612
PspXI VCTCGAGB 1 cut(s) 242
PsuI RGATCY 2 cut(s) 255, 557
RsaI GTAC 4 cut(s) 267, 388, 455, 658
RsaNI GTAC 4 cut(s) 266, 387, 454, 657
SaqAI TTAA 2 cut(s) 198, 627
SatI GCNGC 5 cut(s) 144, 290, 293, 315, 540
Sau3AI GATC 4 cut(s) 250, 255, 446, 557
Sau96I GGNCC 6 cut(s) 232, 330, 491, 492, 564, 612
SchI GAGTC 1 cut(s) 200
ScrFI CCNGG 2 cut(s) 272, 410
SduI GDGCHC 2 cut(s) 444, 495
SetI ASST 8 cut(s) 37, 69, 148, 285, 388, 522, 658, 666
SfoI GGCGCC 1 cut(s) 528
Sfr274I CTCGAG 1 cut(s) 242
SinI GGWCC 2 cut(s) 232, 564
SlaI CTCGAG 1 cut(s) 242
SmlI CTYRAG 1 cut(s) 242
SmoI CTYRAG 1 cut(s) 242
Sse9I AATT 1 cut(s) 499
SsiI CCGC 6 cut(s) 24, 60, 75, 289, 292, 315
SspDI GGCGCC 1 cut(s) 526
StyD4I CCNGG 2 cut(s) 270, 408
StyI CCWWGG 1 cut(s) 63
TaaI ACNGT 1 cut(s) 133
TaiI ACGT 1 cut(s) 388
TaqI TCGA 3 cut(s) 135, 243, 554
TaqII GACCGA 1 cut(s) 609
TasI AATT 1 cut(s) 499
TauI GCSGC 3 cut(s) 292, 295, 317
Tru1I TTAA 2 cut(s) 198, 627
Tru9I TTAA 2 cut(s) 198, 627
TseFI GTSAC 1 cut(s) 19
TseI GCWGC 2 cut(s) 143, 539
Tsp45I GTSAC 1 cut(s) 19
TspDTI ATGAA 2 cut(s) 32, 524
TspGWI ACGGA 4 cut(s) 7, 96, 103, 556
VpaK11BI GGWCC 2 cut(s) 232, 564
XhoI CTCGAG 1 cut(s) 242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.