Rorug07G0274300

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000101
Physical Location & Seq
Reverse (-)
26128493 .. 26133970
5478 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0274300.1

Sequence Viewer

Length: 1680 bp
ATGTGGAGACGGCCTTTAATCGTCCAAAACGATATCGTGATGAGCTTGCACCGAATGGAAATATTTCTATTTTTTCTCACAACGTGCGACCAACAGGGAAAAGGTGAGTATCGTGAACTACTACAAGCTGAGAGTCCTGAAAATTTAGAAAGAAGACACAGGGAATCATTTCCAGAATGGTTTAAATGGAGGGCCACAACATTATATGATGCGGGATTGATTAGTAAGGAGATATATGTATTAGCACAAGGTCCAGATCGACGTACTCTTCAGTATTCTGGGTGTACTGTGAATGGAGTTCGATGGGCGATCAAACAGATGGAGAGATCTCACACCACACAAGATAGTGGGGTTATGACTCTTGGTTCACACGGTAATGTTTATGGAAGCTTGACCAGTGTTGTTCAACTAAAGTTTCAAGGTGGCTACAATGTGTTTCTATTTCAATGTCATTGGGCTGGTATTGAAAGAACAGTAGTCGGTGATAATGATTTCATTGATGATAATTTTATTAATGATGATGCTCTTATGGAAGATGGCATATCATCAAGTGCAGGTGAAATGGAATCACAATTGCCACAAACAAGAGGGAAAAAGAAACGAAAGATTAAGTTCAAACTCCCTCATCCACCTCCAGAAGTTACACCAGCTCCTCACCTAACATCTGAAGCTCAACTCACACCAAATCTGCAACCAACATCAGCCCCTCAAAACACATCATCTTCTAAAAAAACAGCAAGACCTCAGTCCACACCAGCTTCTCAACCTGTGACAAGAACTCAGCCTACACCGGCTTCTCAACCAACACAAACTCCTCAACTTATTAGACTAGCACATCACCCAATAACTGCTGAGCCATCTGATGCTTCTCCACCATATCAAGAGATAGCACCTCAGCAATCAGCAACTCATAATGGAGGGGATTTTGATTCTACACTTTTGTGCACAAAACGGAAGCGCGGAAAGTCAATTGGAAAAGGAACCCTTGATTTGATGTCAGCAAATGGAGGGAAGAAATTGGTTGTGGTTTGGGATCCAGATCATTGGGTTCCTAGTGATAAGATAGTTAGTAAAAAGTTCACTTCTGAAATTGGAATTACTATTCTAGGTTATGCTCCGGTATGTTATGGAGGGTGGTCTAAGATAAAGCCTGATACTAACAGGAAATTGCGGGAGAAGTTGGAGGTTGATCTCCATCATCCAAAAGTTGCATATGTGGACGGAATAATGGCTACAACATACACTCAGTTTATATGGAGATTGCATAATCACTACAAGGAGTGTGGAACATATGAACGTGCACGAACCAAGTTGCCTGACCCAGACCTTCGGAATAGTAGACCTCTAGAGCATTGGCATTGGTTGTGCGATAGTCTTTATAGCAATGAGGGATATATGGAGGTCTGTGCTACTAATGCTCAAAACCGAGATCAACAAGAAAGTGCCCATCGGGATGGTGCAATGCCATTTATTCAGCATGCTTTGCAGGCAGCAAAGGAGAAAATGAAGCATAAGAGGGAAGATGTTGAGGCAAATCTCATTGAAGAGGGACCAGAAGGTACTCCTATCGAATCAATAGAAGTGGCTTTGAATGATGAGATTGAAATTATGGTTGAGAAGTGTCGGAGAAAAGGTGGCAAGGTTCAAGGTGTAGGTGCTTTCCCTCGCTTGGATATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

559

Amino Acids

63.1

Weight (kDa)

7.66

Isoelectric Point (pI)

50.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 545
Acc36I ACCTGC 1 cut(s) 545
AccI GTMKAC 1 cut(s) 1339
AccII CGCG 1 cut(s) 960
AciI CCGC 3 cut(s) 212, 960, 1171
AclWI GGATC 2 cut(s) 1028, 1041
AcsI RAATTY 1 cut(s) 142
AcuI CTGAAG 2 cut(s) 254, 687
AdeI CACNNNGTG 1 cut(s) 84
AfaI GTAC 3 cut(s) 265, 286, 1561
AfiI CCNNNNNNNGG 1 cut(s) 1669
AgsI TTSAA 9 cut(s) 407, 419, 446, 467, 616, 1544, 1591, 1604, 1646
AleI CACNNNNGTG 1 cut(s) 940
AluBI AGCT 6 cut(s) 45, 128, 390, 650, 671, 758
AluI AGCT 6 cut(s) 45, 128, 390, 650, 671, 758
Alw21I GWGCWC 2 cut(s) 947, 1303
Alw44I GTGCAC 2 cut(s) 943, 1299
AlwI GGATC 2 cut(s) 1028, 1041
AoxI GGCC 2 cut(s) 11, 192
ApaLI GTGCAC 2 cut(s) 943, 1299
ApeKI GCWGC 1 cut(s) 1490
ApoI RAATTY 1 cut(s) 142
AseI ATTAAT 1 cut(s) 513
Asp700I GAANNNNTTC 2 cut(s) 63, 168
AspLEI GCGC 1 cut(s) 960
AspS9I GGNCC 3 cut(s) 192, 251, 1550
AsuHPI GGTGA 5 cut(s) 116, 494, 569, 647, 830
AvaII GGWCC 2 cut(s) 251, 1550
BaeGI GKGCMC 3 cut(s) 947, 1303, 1447
BamHI GGATCC 1 cut(s) 1033
BbsI GAAGAC 1 cut(s) 160
Bbv12I GWGCWC 2 cut(s) 947, 1303
BbvCI CCTCAGC 1 cut(s) 894
BbvI GCAGC 1 cut(s) 1502
BccI CCATC 7 cut(s) 297, 313, 530, 865, 1203, 1448, 1455
BceAI ACGGC 1 cut(s) 26
BfaI CTAG 5 cut(s) 830, 1053, 1106, 1346, 1678
BfuAI ACCTGC 1 cut(s) 545
BglII AGATCT 1 cut(s) 326
BisI GCNGC 1 cut(s) 1491
BlpI GCTNAGC 1 cut(s) 852
BlsI GCNGC 1 cut(s) 1492
Bme18I GGWCC 2 cut(s) 251, 1550
BmgT120I GGNCC 3 cut(s) 192, 251, 1550
BmiI GGNNCC 4 cut(s) 982, 1035, 1050, 1551
BmsI GCATC 3 cut(s) 199, 511, 853
BoxI GACNNNNGTC 1 cut(s) 745
BpiI GAAGAC 1 cut(s) 160
BpmI CTGGAG 1 cut(s) 618
Bpu10I CCTNAGC 1 cut(s) 894
Bpu1102I GCTNAGC 1 cut(s) 852
BsaBI GATNNNNATC 2 cut(s) 1038, 1194
BsaWI WCCGGW 1 cut(s) 1117
BsaXI ACNNNNNCTCC 6 cut(s) 634, 664, 796, 826, 1618, 1648
Bsc4I CCNNNNNNNGG 1 cut(s) 1669
Bse118I RCCGGY 1 cut(s) 790
Bse1I ACTGG 1 cut(s) 396
Bse3DI GCAATG 2 cut(s) 1390, 1467
Bse8I GATNNNNATC 2 cut(s) 1038, 1194
BseGI GGATG 3 cut(s) 625, 1198, 1459
BseJI GATNNNNATC 2 cut(s) 1038, 1194
BseLI CCNNNNNNNGG 1 cut(s) 1669
BseMI GCAATG 2 cut(s) 1390, 1467
BseMII CTCAG 6 cut(s) 120, 758, 794, 843, 908, 1259
BseNI ACTGG 1 cut(s) 396
BseRI GAGGAG 2 cut(s) 642, 804
BseSI GKGCMC 3 cut(s) 947, 1303, 1447
BseXI GCAGC 1 cut(s) 1502
BsgI GTGCAG 1 cut(s) 573
Bsh1236I CGCG 1 cut(s) 960
BshFI GGCC 2 cut(s) 13, 194
BsiHKAI GWGCWC 2 cut(s) 947, 1303
BsiSI CCGG 2 cut(s) 791, 1118
BslFI GGGAC 1 cut(s) 1563
BslI CCNNNNNNNGG 1 cut(s) 1669
BsmFI GGGAC 1 cut(s) 1563
BsnI GGCC 2 cut(s) 13, 194
Bsp1286I GDGCHC 3 cut(s) 947, 1303, 1447
Bsp143I GATC 7 cut(s) 256, 309, 326, 1033, 1039, 1189, 1429
Bsp1720I GCTNAGC 1 cut(s) 852
BspACI CCGC 3 cut(s) 212, 960, 1171
BspANI GGCC 2 cut(s) 13, 194
BspCNI CTCAG 6 cut(s) 121, 757, 793, 844, 907, 1258
BspFNI CGCG 1 cut(s) 960
BspLI GGNNCC 4 cut(s) 982, 1035, 1050, 1551
BspMI ACCTGC 1 cut(s) 545
BspPI GGATC 2 cut(s) 1028, 1041
BsrDI GCAATG 2 cut(s) 1390, 1467
BsrFI RCCGGY 1 cut(s) 790
BsrI ACTGG 1 cut(s) 396
BssAI RCCGGY 1 cut(s) 790
BssMI GATC 7 cut(s) 256, 309, 326, 1033, 1039, 1189, 1429
Bst4CI ACNGT 3 cut(s) 289, 374, 475
Bst6I CTCTTC 2 cut(s) 273, 1539
BstAPI GCANNNNNTGC 1 cut(s) 1483
BstC8I GCNNGC 3 cut(s) 47, 1479, 1488
BstDEI CTNAG 7 cut(s) 129, 744, 780, 852, 894, 1140, 1245
BstF5I GGATG 3 cut(s) 625, 1198, 1459
BstFNI CGCG 1 cut(s) 960
BstHHI GCGC 1 cut(s) 960
BstKTI GATC 7 cut(s) 259, 312, 329, 1036, 1042, 1192, 1432
BstMBI GATC 7 cut(s) 256, 309, 326, 1033, 1039, 1189, 1429
BstMWI GCNNNNNNNGC 3 cut(s) 1415, 1483, 1487
BstNSI RCATGY 1 cut(s) 1481
BstPAI GACNNNNGTC 1 cut(s) 745
BstSLI GKGCMC 3 cut(s) 947, 1303, 1447
BstUI CGCG 1 cut(s) 960
BstV1I GCAGC 1 cut(s) 1502
BstV2I GAAGAC 1 cut(s) 160
BstX2I RGATCY 2 cut(s) 326, 1033
BstXI CCANNNNNNTGG 2 cut(s) 1044, 1454
BstYI RGATCY 2 cut(s) 326, 1033
BsuRI GGCC 2 cut(s) 13, 194
BtsCI GGATG 3 cut(s) 625, 1198, 1459
BtsIMutI CAGTG 1 cut(s) 403
BveI ACCTGC 1 cut(s) 545
Cac8I GCNNGC 3 cut(s) 47, 1479, 1488
CfoI GCGC 1 cut(s) 960
Cfr10I RCCGGY 1 cut(s) 790
Cfr13I GGNCC 3 cut(s) 192, 251, 1550
Csp6I GTAC 3 cut(s) 264, 285, 1560
CspCI CAANNNNNGTGG 4 cut(s) 1264, 1299, 1563, 1598
CviAII CATG 1 cut(s) 1478
CviQI GTAC 3 cut(s) 264, 285, 1560
DdeI CTNAG 7 cut(s) 129, 744, 780, 852, 894, 1140, 1245
DpnI GATC 7 cut(s) 258, 311, 328, 1035, 1041, 1191, 1431
DpnII GATC 7 cut(s) 256, 309, 326, 1033, 1039, 1189, 1429
DraI TTTAAA 1 cut(s) 184
DraIII CACNNNGTG 1 cut(s) 84
Eam1104I CTCTTC 2 cut(s) 273, 1539
EarI CTCTTC 2 cut(s) 273, 1539
Eco32I GATATC 2 cut(s) 34, 1675
Eco47I GGWCC 2 cut(s) 251, 1550
Eco57I CTGAAG 2 cut(s) 254, 687
EcoRV GATATC 2 cut(s) 34, 1675
FaeI CATG 1 cut(s) 1481
FalI AAGNNNNNCTT 2 cut(s) 969, 1001
FaqI GGGAC 1 cut(s) 1563
FatI CATG 1 cut(s) 1477
FauI CCCGC 2 cut(s) 205, 1164
FauNDI CATATG 2 cut(s) 1213, 1291
FblI GTMKAC 1 cut(s) 1339
Fnu4HI GCNGC 1 cut(s) 1491
FokI GGATG 3 cut(s) 612, 1185, 1466
Fsp4HI GCNGC 1 cut(s) 1491
FspBI CTAG 5 cut(s) 830, 1053, 1106, 1346, 1678
GlaI GCGC 1 cut(s) 959
GluI GCNGC 1 cut(s) 1491
GsuI CTGGAG 1 cut(s) 618
HaeIII GGCC 2 cut(s) 13, 194
HapII CCGG 2 cut(s) 791, 1118
HhaI GCGC 1 cut(s) 960
Hin1II CATG 1 cut(s) 1481
Hin6I GCGC 1 cut(s) 958
HinP1I GCGC 1 cut(s) 958
HindIII AAGCTT 1 cut(s) 388
HinfI GANTC 6 cut(s) 133, 164, 358, 566, 929, 1571
HpaII CCGG 2 cut(s) 791, 1118
HphI GGTGA 5 cut(s) 116, 494, 569, 647, 830
Hpy166II GTNNAC 9 cut(s) 116, 285, 368, 750, 945, 1080, 1219, 1301, 1340
Hpy188I TCNGA 5 cut(s) 667, 862, 1087, 1332, 1626
Hpy8I GTNNAC 9 cut(s) 116, 285, 368, 750, 945, 1080, 1219, 1301, 1340
Hpy99I CGWCG 1 cut(s) 264
HpyAV CCTTC 2 cut(s) 1337, 1550
HpyCH4III ACNGT 3 cut(s) 289, 374, 475
HpyCH4IV ACGT 3 cut(s) 83, 262, 1297
HpyCH4V TGCA 9 cut(s) 49, 554, 691, 945, 1211, 1264, 1301, 1460, 1486
HpyF10VI GCNNNNNNNGC 3 cut(s) 1415, 1483, 1487
HpyF3I CTNAG 7 cut(s) 129, 744, 780, 852, 894, 1140, 1245
HpySE526I ACGT 3 cut(s) 83, 262, 1297
Hsp92II CATG 1 cut(s) 1481
HspAI GCGC 1 cut(s) 958
Kzo9I GATC 7 cut(s) 256, 309, 326, 1033, 1039, 1189, 1429
LmnI GCTCC 2 cut(s) 655, 1120
Lsp1109I GCAGC 1 cut(s) 1502
LweI GCATC 3 cut(s) 199, 511, 853
MaeI CTAG 5 cut(s) 830, 1053, 1106, 1346, 1678
MaeII ACGT 3 cut(s) 83, 262, 1297
MaeIII GTNAC 2 cut(s) 640, 769
MalI GATC 7 cut(s) 258, 311, 328, 1035, 1041, 1191, 1431
MboI GATC 7 cut(s) 256, 309, 326, 1033, 1039, 1189, 1429
MboII GAAGA 7 cut(s) 165, 260, 545, 714, 1024, 1532, 1556
MfeI CAATTG 2 cut(s) 572, 969
MflI RGATCY 2 cut(s) 326, 1033
MhlI GDGCHC 3 cut(s) 947, 1303, 1447
MluCI AATT 9 cut(s) 142, 505, 572, 969, 1016, 1089, 1095, 1166, 1605
MlyI GAGTC 2 cut(s) 142, 352
MmeI TCCRAC 2 cut(s) 1161, 1604
MroXI GAANNNNTTC 2 cut(s) 63, 168
MseI TTAA 4 cut(s) 17, 183, 513, 609
MslI CAYNNNNRTG 3 cut(s) 375, 940, 1452
MspI CCGG 2 cut(s) 791, 1118
MunI CAATTG 2 cut(s) 572, 969
MvnI CGCG 1 cut(s) 960
MwoI GCNNNNNNNGC 3 cut(s) 1415, 1483, 1487
NdeI CATATG 2 cut(s) 1213, 1291
NdeII GATC 7 cut(s) 256, 309, 326, 1033, 1039, 1189, 1429
NlaIII CATG 1 cut(s) 1481
NlaIV GGNNCC 4 cut(s) 982, 1035, 1050, 1551
NmuCI GTSAC 1 cut(s) 769
NspI RCATGY 1 cut(s) 1481
OliI CACNNNNGTG 1 cut(s) 940
PaeI GCATGC 1 cut(s) 1481
PaqCI CACCTGC 1 cut(s) 545
PcsI WCGNNNNNNNCGW 1 cut(s) 27
PdmI GAANNNNTTC 2 cut(s) 63, 168
PfeI GAWTC 4 cut(s) 164, 566, 929, 1571
PkrI GCNGC 1 cut(s) 1492
PleI GAGTC 2 cut(s) 141, 352
PpsI GAGTC 2 cut(s) 141, 352
PshAI GACNNNNGTC 1 cut(s) 745
PshBI ATTAAT 1 cut(s) 513
PspN4I GGNNCC 4 cut(s) 982, 1035, 1050, 1551
PspPI GGNCC 3 cut(s) 192, 251, 1550
PsrI GAACNNNNNNTAC 2 cut(s) 769, 801
PsuI RGATCY 2 cut(s) 326, 1033
RsaI GTAC 3 cut(s) 265, 286, 1561
RsaNI GTAC 3 cut(s) 264, 285, 1560
RseI CAYNNNNRTG 3 cut(s) 375, 940, 1452
SaqAI TTAA 4 cut(s) 17, 183, 513, 609
SatI GCNGC 1 cut(s) 1491
Sau3AI GATC 7 cut(s) 256, 309, 326, 1033, 1039, 1189, 1429
Sau96I GGNCC 3 cut(s) 192, 251, 1550
SchI GAGTC 2 cut(s) 142, 352
SduI GDGCHC 3 cut(s) 947, 1303, 1447
SfaNI GCATC 3 cut(s) 199, 511, 853
SinI GGWCC 2 cut(s) 251, 1550
SmiMI CAYNNNNRTG 3 cut(s) 375, 940, 1452
SphI GCATGC 1 cut(s) 1481
Sse9I AATT 9 cut(s) 142, 505, 572, 969, 1016, 1089, 1095, 1166, 1605
SsiI CCGC 3 cut(s) 212, 960, 1171
SspI AATATT 1 cut(s) 63
SspMI CTAG 5 cut(s) 830, 1053, 1106, 1346, 1678
TaaI ACNGT 3 cut(s) 289, 374, 475
TaiI ACGT 3 cut(s) 86, 265, 1300
TaqI TCGA 3 cut(s) 259, 301, 1569
TasI AATT 9 cut(s) 142, 505, 572, 969, 1016, 1089, 1095, 1166, 1605
TatI WGTACW 1 cut(s) 284
TfiI GAWTC 4 cut(s) 164, 566, 929, 1571
Tru1I TTAA 4 cut(s) 17, 183, 513, 609
Tru9I TTAA 4 cut(s) 17, 183, 513, 609
TscAI CASTG 1 cut(s) 403
TseFI GTSAC 1 cut(s) 769
TseI GCWGC 1 cut(s) 1490
Tsp45I GTSAC 1 cut(s) 769
TspDTI ATGAA 3 cut(s) 484, 1308, 1520
TspGWI ACGGA 2 cut(s) 967, 1236
TspRI CASTG 1 cut(s) 403
VneI GTGCAC 2 cut(s) 943, 1299
VpaK11BI GGWCC 2 cut(s) 251, 1550
VspI ATTAAT 1 cut(s) 513
XapI RAATTY 1 cut(s) 142
XbaI TCTAGA 1 cut(s) 1345
XceI RCATGY 1 cut(s) 1481
XmiI GTMKAC 1 cut(s) 1339
XmnI GAANNNNTTC 2 cut(s) 63, 168
XspI CTAG 5 cut(s) 830, 1053, 1106, 1346, 1678
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.