Rorug04G0161600

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000101
Physical Location & Seq
Reverse (-)
28129918 .. 28131439
1522 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0161600.1

Sequence Viewer

Length: 1341 bp
ATGTGTTCAGAAATGGTGATCGAAGTAATCAATAAGGAAATAGTTACACCATCATCTTCTTCTCTTCACCACCTTAGAACTTCCAACCTCTCTGTTTTTGATCATCTTTTACCAGACTTGTATAACCCCCTACTTTTGTTCTATCCCAACAATAGTATTACTGATCATAAGATCAATATAGTTGATCATCACCACTCTATGATTACCGAAAGATCTAAGCTTCTGAAAACTTCATTATCTAAAACCCTCAGCCGCTTCTATCCTTTTGCAGGAAGCATATTTAGCCACAACAACATTCTTTCAATCTGTTGCAATGATAATGGGGCTGCATTTATTCAAACTCGTGTCAATTGTCCCATATCAAAGGTTATGGAAAAACACAATTCTGGGATACTAAGTCAATTACTTCCCAATGACCTACAATCAACATTTGAAAGCACAGGCTATCTCCTATTAGTCCAGGCCAACTTCTTTGAATGTGGTGGACTTGCAATTGGGATTTCCATTTCACACAAGATCGCGGACGGGTTCACACTCGGAACATTCATCCGTAGTTGGGCAGCAATGGGCCTTGGCGCTGATGTAATGGCTCTTCCAGCTGTGGAATTTGGTGTTCCAGCATCTCTTTACCCACAACAAGATTTATTCATCAACTCATTGTCAACTTCTATTGAATATGTTAATACTGAAGCTTGCGTAAATAGGAGATTTGTGTTTGATGCCTCAAATATTGTACGTCTCAAGGCTAAAGCCACTAGTGCCACCGTTCCAAATCCAACTCGTGTTGAAGTAGTGTCAGCACTTATTTGGAAATGTGCAATGGAAGCATCAAGATCAAACTTGAGTTTTACAAGACCAGCTATGCTGTTTCTAGCAGCAAACATGCGGAAAGTATTGAAGCATCCCACTTTAATGGGAAATCTTGTAGGACTTGTCTTTGCAACAAAGACACAAGAAGGTGATGCAACTCTTCAAAGCTTAGTTGCTATACTCAGGAAAGGCATTGAGGAATTTAAAGTGAAATATGGTGAGGGAGTTACTGGGGATGCTATTTGCCAACATTTTAAAGAGCATGGAGATTTAATGGATAATAATGATATAAATAACTATATCTGCACCAGTTGGTGCAGGTTTGGCTTTTATGAAGCCAATTTTGGATGGGGAAAGCCATCTTGGGTCACTTTTCCAGGTACGAAAATCAAGAATACAATTGTATTGATTGATACAAAAGACGGTGAAGGCATGGAAGCGTTCTTGAGTTTAAAAGAAGAGGACATGGTTGTAATTGAAACCAATAAGGAGCTGCTTGCATATGCTTCTCTCAATCCCATTGTTATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

446

Amino Acids

49.38

Weight (kDa)

6.36

Isoelectric Point (pI)

39.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 6 - 435 2.2e-79 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1119
AccII CGCG 1 cut(s) 521
AciI CCGC 3 cut(s) 253, 521, 886
AcsI RAATTY 2 cut(s) 605, 1010
AcuI CTGAAG 1 cut(s) 708
AfaI GTAC 2 cut(s) 735, 1192
AfiI CCNNNNNNNGG 2 cut(s) 269, 556
AgsI TTSAA 9 cut(s) 303, 338, 434, 476, 674, 788, 898, 974, 1289
AhlI ACTAGT 1 cut(s) 755
AjnI CCWGG 2 cut(s) 459, 1186
AjuI GAANNNNNNNTTGG 4 cut(s) 1137, 1156, 1169, 1188
AluBI AGCT 6 cut(s) 220, 599, 692, 860, 978, 1303
AluI AGCT 6 cut(s) 220, 599, 692, 860, 978, 1303
Alw26I GTCTC 1 cut(s) 743
AoxI GGCC 2 cut(s) 462, 568
ApeKI GCWGC 4 cut(s) 326, 560, 875, 1303
ApoI RAATTY 2 cut(s) 605, 1010
AspLEI GCGC 1 cut(s) 578
AspS9I GGNCC 1 cut(s) 568
AsuHPI GGTGA 6 cut(s) 28, 59, 182, 971, 1040, 1247
BarI GAAGNNNNNNTAC 2 cut(s) 576, 608
BauI CACGAG 2 cut(s) 342, 780
BbvCI CCTCAGC 1 cut(s) 248
BbvI GCAGC 4 cut(s) 313, 572, 887, 1290
BccI CCATC 3 cut(s) 58, 1152, 1177
BciT130I CCWGG 2 cut(s) 461, 1188
BciVI GTATCC 1 cut(s) 384
BclI TGATCA 3 cut(s) 100, 163, 184
BcoDI GTCTC 1 cut(s) 743
BcuI ACTAGT 1 cut(s) 755
BfaI CTAG 2 cut(s) 756, 872
BfoI RGCGCY 1 cut(s) 579
BfuAI ACCTGC 1 cut(s) 1119
BfuI GTATCC 1 cut(s) 384
BglII AGATCT 1 cut(s) 212
BisI GCNGC 5 cut(s) 253, 327, 561, 876, 1304
BlsI GCNGC 5 cut(s) 254, 328, 562, 877, 1305
Bme1390I CCNGG 2 cut(s) 461, 1188
BmgT120I GGNCC 1 cut(s) 568
BmrFI CCNGG 2 cut(s) 461, 1188
BmrI ACTGGG 1 cut(s) 1050
BmsI GCATC 6 cut(s) 629, 709, 836, 910, 952, 1036
BmuI ACTGGG 1 cut(s) 1050
Bpu10I CCTNAGC 1 cut(s) 248
BpuEI CTTGAG 3 cut(s) 725, 862, 1276
BsaJI CCNNGG 1 cut(s) 571
Bsc4I CCNNNNNNNGG 2 cut(s) 269, 556
Bse1I ACTGG 2 cut(s) 1045, 1119
Bse3DI GCAATG 3 cut(s) 319, 570, 825
BseBI CCWGG 2 cut(s) 461, 1188
BseDI CCNNGG 1 cut(s) 571
BseGI GGATG 4 cut(s) 546, 901, 1051, 1163
BseLI CCNNNNNNNGG 2 cut(s) 269, 556
BseMI GCAATG 3 cut(s) 319, 570, 825
BseMII CTCAG 2 cut(s) 262, 1006
BseNI ACTGG 2 cut(s) 1045, 1119
BseXI GCAGC 4 cut(s) 313, 572, 887, 1290
BsgI GTGCAG 2 cut(s) 1099, 1147
Bsh1236I CGCG 1 cut(s) 521
BshFI GGCC 2 cut(s) 464, 570
BslFI GGGAC 1 cut(s) 339
BslI CCNNNNNNNGG 2 cut(s) 269, 556
BsmAI GTCTC 1 cut(s) 743
BsmBI CGTCTC 1 cut(s) 743
BsmFI GGGAC 1 cut(s) 339
BsnI GGCC 2 cut(s) 464, 570
Bsp143I GATC 8 cut(s) 18, 100, 163, 171, 184, 212, 516, 833
BspACI CCGC 3 cut(s) 253, 521, 886
BspANI GGCC 2 cut(s) 464, 570
BspCNI CTCAG 2 cut(s) 261, 1005
BspFNI CGCG 1 cut(s) 521
BspMI ACCTGC 1 cut(s) 1119
BspQI GCTCTTC 1 cut(s) 597
BsrDI GCAATG 3 cut(s) 319, 570, 825
BsrI ACTGG 2 cut(s) 1045, 1119
BssECI CCNNGG 1 cut(s) 571
BssMI GATC 8 cut(s) 18, 100, 163, 171, 184, 212, 516, 833
BssSI CACGAG 2 cut(s) 342, 780
BssT1I CCWWGG 1 cut(s) 571
Bst2BI CACGAG 2 cut(s) 342, 780
Bst2UI CCWGG 2 cut(s) 461, 1188
Bst4CI ACNGT 2 cut(s) 766, 1235
Bst6I CTCTTC 4 cut(s) 69, 597, 975, 1263
BstC8I GCNNGC 2 cut(s) 694, 1308
BstDEI CTNAG 6 cut(s) 74, 216, 248, 395, 979, 992
BstENI CCTNNNNNAGG 1 cut(s) 267
BstF5I GGATG 4 cut(s) 546, 901, 1051, 1163
BstFNI CGCG 1 cut(s) 521
BstH2I RGCGCY 1 cut(s) 579
BstHHI GCGC 1 cut(s) 578
BstKTI GATC 8 cut(s) 21, 103, 166, 174, 187, 215, 519, 836
BstMAI GTCTC 1 cut(s) 743
BstMBI GATC 8 cut(s) 18, 100, 163, 171, 184, 212, 516, 833
BstMWI GCNNNNNNNGC 5 cut(s) 282, 596, 758, 824, 1134
BstNI CCWGG 2 cut(s) 461, 1188
BstNSI RCATGY 1 cut(s) 886
BstSCI CCNGG 2 cut(s) 459, 1186
BstUI CGCG 1 cut(s) 521
BstV1I GCAGC 4 cut(s) 313, 572, 887, 1290
BstX2I RGATCY 1 cut(s) 212
BstXI CCANNNNNNTGG 1 cut(s) 913
BstYI RGATCY 1 cut(s) 212
BsuI GTATCC 1 cut(s) 384
BsuRI GGCC 2 cut(s) 464, 570
BtsCI GGATG 4 cut(s) 546, 901, 1051, 1163
BveI ACCTGC 1 cut(s) 1119
Cac8I GCNNGC 2 cut(s) 694, 1308
CfoI GCGC 1 cut(s) 578
Cfr13I GGNCC 1 cut(s) 568
Csp6I GTAC 2 cut(s) 734, 1191
CviAII CATG 4 cut(s) 883, 1073, 1243, 1276
CviQI GTAC 2 cut(s) 734, 1191
DdeI CTNAG 6 cut(s) 74, 216, 248, 395, 979, 992
DpnI GATC 8 cut(s) 20, 102, 165, 173, 186, 214, 518, 835
DpnII GATC 8 cut(s) 18, 100, 163, 171, 184, 212, 516, 833
DraI TTTAAA 3 cut(s) 1015, 1066, 1263
Eam1104I CTCTTC 4 cut(s) 69, 597, 975, 1263
EarI CTCTTC 4 cut(s) 69, 597, 975, 1263
Eco130I CCWWGG 1 cut(s) 571
Eco57I CTGAAG 1 cut(s) 708
EcoNI CCTNNNNNAGG 1 cut(s) 267
EcoRII CCWGG 2 cut(s) 459, 1186
EcoT14I CCWWGG 1 cut(s) 571
ErhI CCWWGG 1 cut(s) 571
Esp3I CGTCTC 1 cut(s) 743
FaeI CATG 4 cut(s) 886, 1076, 1246, 1279
FaqI GGGAC 1 cut(s) 339
FatI CATG 4 cut(s) 882, 1072, 1242, 1275
FauNDI CATATG 1 cut(s) 1312
FbaI TGATCA 3 cut(s) 100, 163, 184
Fnu4HI GCNGC 5 cut(s) 253, 327, 561, 876, 1304
FokI GGATG 4 cut(s) 533, 888, 1058, 1170
Fsp4HI GCNGC 5 cut(s) 253, 327, 561, 876, 1304
FspBI CTAG 2 cut(s) 756, 872
GlaI GCGC 1 cut(s) 577
GluI GCNGC 5 cut(s) 253, 327, 561, 876, 1304
HaeII RGCGCY 1 cut(s) 579
HaeIII GGCC 2 cut(s) 464, 570
HhaI GCGC 1 cut(s) 578
Hin1II CATG 4 cut(s) 886, 1076, 1246, 1279
Hin6I GCGC 1 cut(s) 576
HinP1I GCGC 1 cut(s) 576
HincII GTYRAC 1 cut(s) 663
HindII GTYRAC 1 cut(s) 663
HindIII AAGCTT 3 cut(s) 218, 690, 976
HphI GGTGA 6 cut(s) 28, 59, 182, 971, 1040, 1247
Hpy166II GTNNAC 3 cut(s) 485, 531, 663
Hpy188I TCNGA 3 cut(s) 10, 225, 539
Hpy188III TCNNGA 4 cut(s) 831, 994, 1201, 1255
Hpy8I GTNNAC 3 cut(s) 485, 531, 663
HpyAV CCTTC 2 cut(s) 950, 1232
HpyCH4III ACNGT 2 cut(s) 766, 1235
HpyCH4IV ACGT 1 cut(s) 736
HpyF10VI GCNNNNNNNGC 5 cut(s) 282, 596, 758, 824, 1134
HpyF3I CTNAG 6 cut(s) 74, 216, 248, 395, 979, 992
HpySE526I ACGT 1 cut(s) 736
Hsp92II CATG 4 cut(s) 886, 1076, 1246, 1279
HspAI GCGC 1 cut(s) 576
Ksp22I TGATCA 3 cut(s) 100, 163, 184
Kzo9I GATC 8 cut(s) 18, 100, 163, 171, 184, 212, 516, 833
LguI GCTCTTC 1 cut(s) 597
LmnI GCTCC 1 cut(s) 1300
Lsp1109I GCAGC 4 cut(s) 313, 572, 887, 1290
LweI GCATC 6 cut(s) 629, 709, 836, 910, 952, 1036
MaeI CTAG 2 cut(s) 756, 872
MaeII ACGT 1 cut(s) 736
MaeIII GTNAC 3 cut(s) 43, 1036, 1177
MalI GATC 8 cut(s) 20, 102, 165, 173, 186, 214, 518, 835
MboI GATC 8 cut(s) 18, 100, 163, 171, 184, 212, 516, 833
MboII GAAGA 6 cut(s) 48, 51, 56, 584, 962, 1280
MfeI CAATTG 3 cut(s) 349, 492, 1209
MflI RGATCY 1 cut(s) 212
MluCI AATT 9 cut(s) 349, 382, 401, 492, 605, 1010, 1150, 1209, 1284
MmeI TCCRAC 2 cut(s) 108, 800
MnlI CCTC 6 cut(s) 98, 257, 733, 1000, 1024, 1264
MseI TTAA 6 cut(s) 681, 911, 1014, 1065, 1082, 1262
MslI CAYNNNNRTG 1 cut(s) 911
MspA1I CMGCKG 1 cut(s) 599
MspR9I CCNGG 2 cut(s) 461, 1188
MunI CAATTG 3 cut(s) 349, 492, 1209
MvaI CCWGG 2 cut(s) 461, 1188
MvnI CGCG 1 cut(s) 521
MwoI GCNNNNNNNGC 5 cut(s) 282, 596, 758, 824, 1134
NdeI CATATG 1 cut(s) 1312
NdeII GATC 8 cut(s) 18, 100, 163, 171, 184, 212, 516, 833
NlaIII CATG 4 cut(s) 886, 1076, 1246, 1279
NmuCI GTSAC 1 cut(s) 1177
NspI RCATGY 1 cut(s) 886
PciSI GCTCTTC 1 cut(s) 597
PkrI GCNGC 5 cut(s) 254, 328, 562, 877, 1305
Psp6I CCWGG 2 cut(s) 459, 1186
PspGI CCWGG 2 cut(s) 459, 1186
PspPI GGNCC 1 cut(s) 568
PsuI RGATCY 1 cut(s) 212
PvuII CAGCTG 1 cut(s) 599
RsaI GTAC 2 cut(s) 735, 1192
RsaNI GTAC 2 cut(s) 734, 1191
RseI CAYNNNNRTG 1 cut(s) 911
SapI GCTCTTC 1 cut(s) 597
SaqAI TTAA 6 cut(s) 681, 911, 1014, 1065, 1082, 1262
SatI GCNGC 5 cut(s) 253, 327, 561, 876, 1304
Sau3AI GATC 8 cut(s) 18, 100, 163, 171, 184, 212, 516, 833
Sau96I GGNCC 1 cut(s) 568
ScrFI CCNGG 2 cut(s) 461, 1188
SfaNI GCATC 6 cut(s) 629, 709, 836, 910, 952, 1036
SmiMI CAYNNNNRTG 1 cut(s) 911
SmlI CTYRAG 3 cut(s) 740, 841, 1255
SmoI CTYRAG 3 cut(s) 740, 841, 1255
SpeI ACTAGT 1 cut(s) 755
Sse9I AATT 9 cut(s) 349, 382, 401, 492, 605, 1010, 1150, 1209, 1284
SsiI CCGC 3 cut(s) 253, 521, 886
SspI AATATT 1 cut(s) 730
SspMI CTAG 2 cut(s) 756, 872
StyD4I CCNGG 2 cut(s) 459, 1186
StyI CCWWGG 1 cut(s) 571
TaaI ACNGT 2 cut(s) 766, 1235
TaiI ACGT 1 cut(s) 739
TaqI TCGA 1 cut(s) 21
TasI AATT 9 cut(s) 349, 382, 401, 492, 605, 1010, 1150, 1209, 1284
TauI GCSGC 1 cut(s) 255
Tru1I TTAA 6 cut(s) 681, 911, 1014, 1065, 1082, 1262
Tru9I TTAA 6 cut(s) 681, 911, 1014, 1065, 1082, 1262
TseFI GTSAC 1 cut(s) 1177
TseI GCWGC 4 cut(s) 326, 560, 875, 1303
Tsp45I GTSAC 1 cut(s) 1177
TspDTI ATGAA 4 cut(s) 222, 535, 637, 1158
TspGWI ACGGA 1 cut(s) 539
XagI CCTNNNNNAGG 1 cut(s) 267
XapI RAATTY 2 cut(s) 605, 1010
XceI RCATGY 1 cut(s) 886
XspI CTAG 2 cut(s) 756, 872
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.