FvH4_5g35320

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000101
Physical Location & Seq
Reverse (-)
25863455 .. 25865406
1952 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g35320.t2

Sequence Viewer

Length: 1239 bp
ATGGCTGATACCCAAGTGAAGTTGACTAGTCCCCCCAATTTTTGTGTCGAGGACAGCAAGAAACACTTAATGAACATTTTTGAAGATTTGACTAAAGACTGTGAGGACAAGAATTCGAGAAATTTTTTCGACAGTATTAGGGACTACGACGCCTTTAATGCAAGTGCGATTCAAATGTTTTGTACTATGGCAGATTCCGACTTACTTGATGAAGCAAGAGAGCTCTTTAAGCCACTCTCTGGTGAGGTCACTCTGCCTCAAGTGGCTGTCTTTACTATTGTGATTTCGACCTATGCCAGCAATGGCAACATCAAGGATGCTCACAAGGTCTACCAGCAGATGATAGCCTCTGGTGTCACCCCCACCGCCTACACTTATGCTGCACTCATCGCTGGATTTGCAGTAGACTTTTCCAATTCGGATTCTGTCCGGTATGCCAAGAAGTATTTCCTTGAAATGTTGGATAGGGGTATGAAGCCCCATTCTCAACCTTACATGAATCTTATGACTTTCATTGCCTACCAAGAACCAGAGGAGGAGGGCAATAAGTTCCTTGAACAGGTACAAGCCAAGGGGCTCAGCCTTGACCACTATGATTTTCCATACAATGAAGTCCACCGCACAGAACAGATGAAGGTTATCCGTATTTGTAATGATCTTATCTTCAGCAATACTATTGACAAGGATGTGCAAAAGTATGTCCTGAGGTCATGCGATTCAGCGTGGAAAATCTTCGTACTTTCAATGAATATGCACAATGCTTTGCTAGAGGATGGAAATGTCAATGAAGACACAATTCAACACGCACTCACAGATCCCTCGGTCTTAATCCACACCTTGGTTATTGAATCCTACCTCAAGTTTGGCAAGGGCAAGGGTGCTCTGGAGGCCTACTGGGGCATGTTGGCTGCGGGTTTTGCCCCCAACTCCTACACTTACACAGTTTTAATCAAGGGACTCACTGCTGATCCTGTCTTCTTGGGAGATGCCAAAAAGTGCTTGCTTGAGATGATGGAAAAGGGGATGAGGCCCAATGCTGGTACCTACACTGCTGTGATAGAGAGCTTTGCAAAGCAGGGTGACAAGGGATCCGAGGAGGAGTGCAAAGAGTTGGTGGAGGTGATGATAAGCAAGGGGTTTGTGCCGAATGCAAAGGCTATGAGGGAGGTTTTAAAGGGAAGACCAAAAGCTACAATAAGAAGGATCATGAACATTGTCCTTTCCAAATTGAAGGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

413

Amino Acids

46.34

Weight (kDa)

5.61

Isoelectric Point (pI)

36.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 86 - 134 2.8e-11 PPR repeat family
PPR_2 PF13041 273 - 320 2.1e-08 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1040
AccB1I GGYRCC 1 cut(s) 1040
AccB7I CCANNNNNTGG 2 cut(s) 239, 838
AccI GTMKAC 2 cut(s) 330, 405
AciI CCGC 3 cut(s) 366, 619, 911
AclWI GGATC 5 cut(s) 809, 962, 1083, 1096, 1211
AcsI RAATTY 2 cut(s) 112, 121
AcuI CTGAAG 1 cut(s) 649
AcyI GRCGYC 1 cut(s) 150
AfaI GTAC 4 cut(s) 184, 564, 738, 1042
AfiI CCNNNNNNNGG 4 cut(s) 239, 559, 838, 1037
AgsI TTSAA 8 cut(s) 83, 173, 455, 557, 744, 800, 848, 1231
AhlI ACTAGT 1 cut(s) 26
AjuI GAANNNNNNNTTGG 2 cut(s) 431, 463
AleI CACNNNNGTG 1 cut(s) 1052
AluBI AGCT 3 cut(s) 223, 1065, 1190
AluI AGCT 3 cut(s) 223, 1065, 1190
Alw21I GWGCWC 2 cut(s) 225, 883
AlwI GGATC 5 cut(s) 809, 962, 1083, 1096, 1211
AoxI GGCC 2 cut(s) 888, 1028
ApeKI GCWGC 2 cut(s) 380, 908
ApoI RAATTY 2 cut(s) 112, 121
Asp700I GAANNNNTTC 2 cut(s) 446, 731
Asp718I GGTACC 1 cut(s) 1040
AspS9I GGNCC 1 cut(s) 1029
AsuHPI GGTGA 4 cut(s) 254, 349, 1091, 1132
AxyI CCTNAGG 1 cut(s) 704
BaeI ACNNNNGTAYC 1 cut(s) 33
BamHI GGATCC 1 cut(s) 1088
BanI GGYRCC 1 cut(s) 1040
BanII GRGCYC 2 cut(s) 225, 579
BbsI GAAGAC 3 cut(s) 795, 967, 1186
Bbv12I GWGCWC 2 cut(s) 225, 883
BbvI GCAGC 2 cut(s) 367, 895
BccI CCATC 2 cut(s) 767, 1006
BcuI ACTAGT 1 cut(s) 26
BfaI CTAG 2 cut(s) 27, 767
BisI GCNGC 2 cut(s) 381, 909
BlpI GCTNAGC 1 cut(s) 578
BlsI GCNGC 2 cut(s) 382, 910
BmgT120I GGNCC 1 cut(s) 1029
BmiI GGNNCC 2 cut(s) 1042, 1090
BmrI ACTGGG 1 cut(s) 904
BmsI GCATC 2 cut(s) 307, 976
BmuI ACTGGG 1 cut(s) 904
BpiI GAAGAC 3 cut(s) 795, 967, 1186
BpmI CTGGAG 1 cut(s) 905
Bpu1102I GCTNAGC 1 cut(s) 578
BpuEI CTTGAG 3 cut(s) 243, 842, 1025
BsaHI GRCGYC 1 cut(s) 150
BsaJI CCNNGG 4 cut(s) 570, 819, 837, 1092
BsaWI WCCGGW 1 cut(s) 429
Bsc4I CCNNNNNNNGG 4 cut(s) 239, 559, 838, 1037
Bse1I ACTGG 1 cut(s) 899
Bse21I CCTNAGG 1 cut(s) 704
Bse3DI GCAATG 2 cut(s) 307, 513
BseDI CCNNGG 4 cut(s) 570, 819, 837, 1092
BseGI GGATG 4 cut(s) 322, 691, 778, 1029
BseLI CCNNNNNNNGG 4 cut(s) 239, 559, 838, 1037
BseMI GCAATG 2 cut(s) 307, 513
BseMII CTCAG 2 cut(s) 592, 695
BseNI ACTGG 1 cut(s) 899
BseRI GAGGAG 4 cut(s) 548, 551, 1109, 1112
BseXI GCAGC 2 cut(s) 367, 895
BsgI GTGCAG 1 cut(s) 366
BshFI GGCC 2 cut(s) 890, 1030
BshNI GGYRCC 1 cut(s) 1040
BsiHKAI GWGCWC 2 cut(s) 225, 883
BsiSI CCGG 1 cut(s) 430
BslFI GGGAC 3 cut(s) 15, 155, 969
BslI CCNNNNNNNGG 4 cut(s) 239, 559, 838, 1037
BsmFI GGGAC 3 cut(s) 15, 155, 969
BsmI GAATGC 1 cut(s) 1153
BsnI GGCC 2 cut(s) 890, 1030
Bsp1286I GDGCHC 3 cut(s) 225, 579, 883
Bsp143I GATC 5 cut(s) 655, 814, 967, 1088, 1203
Bsp1720I GCTNAGC 1 cut(s) 578
BspACI CCGC 3 cut(s) 366, 619, 911
BspANI GGCC 2 cut(s) 890, 1030
BspCNI CTCAG 2 cut(s) 591, 696
BspHI TCATGA 1 cut(s) 1206
BspLI GGNNCC 2 cut(s) 1042, 1090
BspPI GGATC 5 cut(s) 809, 962, 1083, 1096, 1211
BspT107I GGYRCC 1 cut(s) 1040
BsrDI GCAATG 2 cut(s) 307, 513
BsrI ACTGG 1 cut(s) 899
BssECI CCNNGG 4 cut(s) 570, 819, 837, 1092
BssMI GATC 5 cut(s) 655, 814, 967, 1088, 1203
BssNI GRCGYC 1 cut(s) 150
BssT1I CCWWGG 2 cut(s) 570, 837
Bst4CI ACNGT 3 cut(s) 101, 134, 943
BstACI GRCGYC 1 cut(s) 150
BstC8I GCNNGC 2 cut(s) 298, 1001
BstDEI CTNAG 2 cut(s) 578, 704
BstENI CCTNNNNNAGG 1 cut(s) 557
BstF5I GGATG 4 cut(s) 322, 691, 778, 1029
BstKTI GATC 5 cut(s) 658, 817, 970, 1091, 1206
BstMBI GATC 5 cut(s) 655, 814, 967, 1088, 1203
BstMWI GCNNNNNNNGC 6 cut(s) 158, 229, 389, 398, 887, 917
BstNSI RCATGY 1 cut(s) 904
BstV1I GCAGC 2 cut(s) 367, 895
BstV2I GAAGAC 3 cut(s) 795, 967, 1186
BstX2I RGATCY 2 cut(s) 814, 1088
BstYI RGATCY 2 cut(s) 814, 1088
Bsu36I CCTNAGG 1 cut(s) 704
BsuRI GGCC 2 cut(s) 890, 1030
BtgZI GCGATG 1 cut(s) 373
BtsCI GGATG 4 cut(s) 322, 691, 778, 1029
BtsI GCAGTG 2 cut(s) 960, 1047
BtsIMutI CAGTG 2 cut(s) 960, 1047
Cac8I GCNNGC 2 cut(s) 298, 1001
CciI TCATGA 1 cut(s) 1206
Cfr13I GGNCC 1 cut(s) 1029
CseI GACGC 1 cut(s) 158
Csp6I GTAC 4 cut(s) 183, 563, 737, 1041
CviAII CATG 4 cut(s) 496, 711, 901, 1207
CviQI GTAC 4 cut(s) 183, 563, 737, 1041
DdeI CTNAG 2 cut(s) 578, 704
DpnI GATC 5 cut(s) 657, 816, 969, 1090, 1205
DpnII GATC 5 cut(s) 655, 814, 967, 1088, 1203
DraI TTTAAA 1 cut(s) 1173
Ecl136II GAGCTC 1 cut(s) 223
Eco130I CCWWGG 2 cut(s) 570, 837
Eco147I AGGCCT 1 cut(s) 890
Eco24I GRGCYC 2 cut(s) 225, 579
Eco53kI GAGCTC 1 cut(s) 223
Eco57I CTGAAG 1 cut(s) 649
Eco81I CCTNAGG 1 cut(s) 704
EcoICRI GAGCTC 1 cut(s) 223
EcoNI CCTNNNNNAGG 1 cut(s) 557
EcoRI GAATTC 1 cut(s) 112
EcoT14I CCWWGG 2 cut(s) 570, 837
EcoT38I GRGCYC 2 cut(s) 225, 579
ErhI CCWWGG 2 cut(s) 570, 837
FaeI CATG 4 cut(s) 499, 714, 904, 1210
FalI AAGNNNNNCTT 2 cut(s) 50, 82
FaqI GGGAC 3 cut(s) 15, 155, 969
FatI CATG 4 cut(s) 495, 710, 900, 1206
FauI CCCGC 1 cut(s) 904
FblI GTMKAC 2 cut(s) 330, 405
Fnu4HI GCNGC 2 cut(s) 381, 909
FokI GGATG 4 cut(s) 329, 698, 785, 1036
FriOI GRGCYC 2 cut(s) 225, 579
Fsp4HI GCNGC 2 cut(s) 381, 909
FspBI CTAG 2 cut(s) 27, 767
GluI GCNGC 2 cut(s) 381, 909
GsuI CTGGAG 1 cut(s) 905
HaeIII GGCC 2 cut(s) 890, 1030
HapII CCGG 1 cut(s) 430
HgaI GACGC 1 cut(s) 158
Hin1I GRCGYC 1 cut(s) 150
Hin1II CATG 4 cut(s) 499, 714, 904, 1210
HincII GTYRAC 1 cut(s) 24
HindII GTYRAC 1 cut(s) 24
HinfI GANTC 7 cut(s) 169, 194, 422, 499, 716, 848, 957
HpaII CCGG 1 cut(s) 430
HphI GGTGA 4 cut(s) 254, 349, 1091, 1132
Hpy166II GTNNAC 4 cut(s) 24, 331, 406, 616
Hpy188I TCNGA 3 cut(s) 199, 421, 1093
Hpy188III TCNNGA 4 cut(s) 117, 703, 884, 1207
Hpy8I GTNNAC 4 cut(s) 24, 331, 406, 616
Hpy99I CGWCG 1 cut(s) 152
HpyAV CCTTC 3 cut(s) 628, 1194, 1225
HpyCH4III ACNGT 3 cut(s) 101, 134, 943
HpyCH4V TGCA 8 cut(s) 161, 383, 401, 691, 754, 1070, 1104, 1151
HpyF10VI GCNNNNNNNGC 6 cut(s) 158, 229, 389, 398, 887, 917
HpyF3I CTNAG 2 cut(s) 578, 704
Hsp92I GRCGYC 1 cut(s) 150
Hsp92II CATG 4 cut(s) 499, 714, 904, 1210
KpnI GGTACC 1 cut(s) 1044
Kzo9I GATC 5 cut(s) 655, 814, 967, 1088, 1203
Lsp1109I GCAGC 2 cut(s) 367, 895
LweI GCATC 2 cut(s) 307, 976
MaeI CTAG 2 cut(s) 27, 767
MaeIII GTNAC 3 cut(s) 247, 355, 1079
MalI GATC 5 cut(s) 657, 816, 969, 1090, 1205
MboI GATC 5 cut(s) 655, 814, 967, 1088, 1203
MboII GAAGA 6 cut(s) 95, 655, 724, 800, 967, 1191
MflI RGATCY 2 cut(s) 814, 1088
MhlI GDGCHC 3 cut(s) 225, 579, 883
MluCI AATT 6 cut(s) 37, 112, 121, 415, 795, 1226
MlyI GAGTC 1 cut(s) 951
MmeI TCCRAC 2 cut(s) 222, 441
MroXI GAANNNNTTC 2 cut(s) 446, 731
MseI TTAA 6 cut(s) 68, 156, 228, 827, 947, 1172
MslI CAYNNNNRTG 1 cut(s) 1052
MspI CCGG 1 cut(s) 430
Mva1269I GAATGC 1 cut(s) 1153
MwoI GCNNNNNNNGC 6 cut(s) 158, 229, 389, 398, 887, 917
NdeII GATC 5 cut(s) 655, 814, 967, 1088, 1203
NlaIII CATG 4 cut(s) 499, 714, 904, 1210
NlaIV GGNNCC 2 cut(s) 1042, 1090
NmuCI GTSAC 3 cut(s) 247, 355, 1079
NspI RCATGY 1 cut(s) 904
OliI CACNNNNGTG 1 cut(s) 1052
PagI TCATGA 1 cut(s) 1206
PceI AGGCCT 1 cut(s) 890
PctI GAATGC 1 cut(s) 1153
PdmI GAANNNNTTC 2 cut(s) 446, 731
PfeI GAWTC 6 cut(s) 169, 194, 422, 499, 716, 848
PflMI CCANNNNNTGG 2 cut(s) 239, 838
PkrI GCNGC 2 cut(s) 382, 910
PleI GAGTC 1 cut(s) 951
PpsI GAGTC 1 cut(s) 951
Psp124BI GAGCTC 1 cut(s) 225
PspN4I GGNNCC 2 cut(s) 1042, 1090
PspPI GGNCC 1 cut(s) 1029
PsuI RGATCY 2 cut(s) 814, 1088
RsaI GTAC 4 cut(s) 184, 564, 738, 1042
RsaNI GTAC 4 cut(s) 183, 563, 737, 1041
RseI CAYNNNNRTG 1 cut(s) 1052
SacI GAGCTC 1 cut(s) 225
SaqAI TTAA 6 cut(s) 68, 156, 228, 827, 947, 1172
SatI GCNGC 2 cut(s) 381, 909
Sau3AI GATC 5 cut(s) 655, 814, 967, 1088, 1203
Sau96I GGNCC 1 cut(s) 1029
SchI GAGTC 1 cut(s) 951
SduI GDGCHC 3 cut(s) 225, 579, 883
SfaNI GCATC 2 cut(s) 307, 976
SmiMI CAYNNNNRTG 1 cut(s) 1052
SmlI CTYRAG 3 cut(s) 258, 857, 1004
SmoI CTYRAG 3 cut(s) 258, 857, 1004
SpeI ACTAGT 1 cut(s) 26
Sse9I AATT 6 cut(s) 37, 112, 121, 415, 795, 1226
SseBI AGGCCT 1 cut(s) 890
SsiI CCGC 3 cut(s) 366, 619, 911
SspMI CTAG 2 cut(s) 27, 767
SstI GAGCTC 1 cut(s) 225
StuI AGGCCT 1 cut(s) 890
StyI CCWWGG 2 cut(s) 570, 837
TaaI ACNGT 3 cut(s) 101, 134, 943
TaqI TCGA 4 cut(s) 48, 116, 129, 287
TaqII GACCGA 1 cut(s) 811
TasI AATT 6 cut(s) 37, 112, 121, 415, 795, 1226
TatI WGTACW 1 cut(s) 182
TfiI GAWTC 6 cut(s) 169, 194, 422, 499, 716, 848
Tru1I TTAA 6 cut(s) 68, 156, 228, 827, 947, 1172
Tru9I TTAA 6 cut(s) 68, 156, 228, 827, 947, 1172
TscAI CASTG 2 cut(s) 967, 1054
TseFI GTSAC 3 cut(s) 247, 355, 1079
TseI GCWGC 2 cut(s) 380, 908
Tsp45I GTSAC 3 cut(s) 247, 355, 1079
TspGWI ACGGA 1 cut(s) 632
TspRI CASTG 2 cut(s) 967, 1054
Van91I CCANNNNNTGG 2 cut(s) 239, 838
XagI CCTNNNNNAGG 1 cut(s) 557
XapI RAATTY 2 cut(s) 112, 121
XceI RCATGY 1 cut(s) 904
XmiI GTMKAC 2 cut(s) 330, 405
XmnI GAANNNNTTC 2 cut(s) 446, 731
XspI CTAG 2 cut(s) 27, 767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.