RchiOBHm_Chr7g0236591

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000101
Physical Location & Seq
Reverse (-)
61314977 .. 61316083
1107 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ21202

Sequence Viewer

Length: 999 bp
ATGACAACCTTAACGAATTTGGGATCCAAGTGTTCAATTTGTTGGCAAATTTCGGCCAGGCTAATGAAGCCAAAGAGCTATTTAGGCCTCTCGCTGTGCCGGCTGTATTGCCGGATGTGGCTGTCCTCACAATGGTCATTCTGGTCTACGCCCATGCTGGAAATTAAGGCCAAGGCTGCTCTCAAGGCCTATCAGCACATGGTAGCCACTGGTGTCACCCCCACCTCCGCTACTTACAATGCACTCATCACAGCATTCGCAGAAGACTCGTCTTCTGATTCCAGTTTTGTTGGCTATGCTAACAAGTATTTTTTGGAAATGTTGGATAAGGGGATGAAGCCCCATCCTGGTTGCTATATATCTGTGTTTGACGCCATTGCCTGTCGTGAGTCAGTGGACAAGGCCAAGGAGGTCCTTGAGCAAATAAAAGCAAAGGGGTTTACTCCTGTCTTCTGCAAGTGGCGCATCCGTGGCCTCAAGAAAGAGGCATCGAGGATGTTCCATGCTTTGGTAGATGATGGAGATGTAGACGAGGTCAAGGAGATTGTTAGGCCCACCCTTGAGACAGGCGTAGAATCCATGGTTGCAATATACACCTCCATTATTACGGCCTACCTCAATGCTGGAAAGACCAAGGCAGTTCTCGAGGCCTACCGTGGCATGTTAGCTGCTGGGGTTGCCCTCAACTCTTACACTTACACTGTTTTAATCAAGGGACTCACTACTGACCCCAACTTTTTTGAAGATGCCAAGAAGTGCTTGCTTGAGATGATGGACAAGGGGAAGCGGCCCAATGTTGCTACTTATACTGCGGTGATAGAGGCCTTTACAAGGAAGGAGGACAAGGCAGCTGAGGAGGAGGGCAAAGACTTGGTGTGGGTGATGATGAGTAAGGGGTTTGTGCCTAATGCAAAAGCAATGAGGGAGGTTCTAAAAGAACGGCCAACAAATGTAATAAGAAGGGTCATGAATATTGTACTTTCCAAGTTGAAAGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

332

Amino Acids

37.12

Weight (kDa)

9.2

Isoelectric Point (pI)

22.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_24 PF23276 191 - 282 2.6e-08 Fungal tetratrico peptide repeats
PPR_2 PF13041 195 - 240 2e-10 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 508
AccI GTMKAC 2 cut(s) 146, 528
AciI CCGC 3 cut(s) 228, 787, 812
AclWI GGATC 2 cut(s) 18, 31
AcoI YGGCCR 2 cut(s) 54, 941
AcsI RAATTY 2 cut(s) 16, 48
AcyI GRCGYC 1 cut(s) 372
AfaI GTAC 1 cut(s) 978
AfiI CCNNNNNNNGG 4 cut(s) 132, 347, 508, 831
AgsI TTSAA 3 cut(s) 36, 743, 991
AjnI CCWGG 2 cut(s) 56, 346
AluBI AGCT 3 cut(s) 78, 668, 851
AluI AGCT 3 cut(s) 78, 668, 851
Alw26I GTCTC 1 cut(s) 557
AlwI GGATC 2 cut(s) 18, 31
Ama87I CYCGRG 1 cut(s) 644
ApeKI GCWGC 3 cut(s) 176, 668, 848
ApoI RAATTY 2 cut(s) 16, 48
AspLEI GCGC 1 cut(s) 465
AspS9I GGNCC 3 cut(s) 412, 552, 789
AsuHPI GGTGA 3 cut(s) 208, 826, 892
AvaI CYCGRG 1 cut(s) 644
AvaII GGWCC 1 cut(s) 412
BamHI GGATCC 1 cut(s) 23
BbsI GAAGAC 3 cut(s) 264, 270, 442
BbvCI CCTCAGC 1 cut(s) 852
BbvI GCAGC 3 cut(s) 163, 655, 860
BccI CCATC 3 cut(s) 351, 512, 766
BceAI ACGGC 2 cut(s) 624, 956
BcgI CGANNNNNNTGC 2 cut(s) 249, 283
BciT130I CCWGG 2 cut(s) 58, 348
BcoDI GTCTC 1 cut(s) 557
BisI GCNGC 4 cut(s) 177, 669, 788, 849
BlsI GCNGC 4 cut(s) 178, 670, 789, 850
Bme1390I CCNGG 2 cut(s) 58, 348
Bme18I GGWCC 1 cut(s) 412
BmeT110I CYCGRG 1 cut(s) 644
BmgT120I GGNCC 3 cut(s) 412, 552, 789
BmiI GGNNCC 1 cut(s) 25
BmrFI CCNGG 2 cut(s) 58, 348
BmsI GCATC 3 cut(s) 474, 497, 736
BpiI GAAGAC 3 cut(s) 264, 270, 442
Bpu10I CCTNAGC 1 cut(s) 852
BpuEI CTTGAG 5 cut(s) 167, 437, 461, 581, 785
BsaHI GRCGYC 1 cut(s) 372
BsaJI CCNNGG 6 cut(s) 171, 405, 469, 579, 633, 655
Bsc4I CCNNNNNNNGG 4 cut(s) 132, 347, 508, 831
Bse118I RCCGGY 1 cut(s) 99
Bse1I ACTGG 2 cut(s) 214, 282
Bse3DI GCAATG 2 cut(s) 375, 924
BseBI CCWGG 2 cut(s) 58, 348
BseDI CCNNGG 6 cut(s) 171, 405, 469, 579, 633, 655
BseGI GGATG 5 cut(s) 120, 339, 343, 465, 501
BseLI CCNNNNNNNGG 4 cut(s) 132, 347, 508, 831
BseMI GCAATG 2 cut(s) 375, 924
BseMII CTCAG 1 cut(s) 843
BseNI ACTGG 2 cut(s) 214, 282
BseRI GAGGAG 2 cut(s) 869, 872
BseXI GCAGC 3 cut(s) 163, 655, 860
BseYI CCCAGC 1 cut(s) 671
BsiHKCI CYCGRG 1 cut(s) 644
BsiSI CCGG 2 cut(s) 100, 112
BslFI GGGAC 1 cut(s) 729
BslI CCNNNNNNNGG 4 cut(s) 132, 347, 508, 831
BsmAI GTCTC 1 cut(s) 557
BsmFI GGGAC 1 cut(s) 729
BsmI GAATGC 1 cut(s) 254
BsoBI CYCGRG 1 cut(s) 644
Bsp143I GATC 1 cut(s) 23
Bsp19I CCATGG 1 cut(s) 579
BspACI CCGC 3 cut(s) 228, 787, 812
BspCNI CTCAG 1 cut(s) 844
BspHI TCATGA 1 cut(s) 966
BspLI GGNNCC 1 cut(s) 25
BspPI GGATC 2 cut(s) 18, 31
BsrDI GCAATG 2 cut(s) 375, 924
BsrFI RCCGGY 1 cut(s) 99
BsrI ACTGG 2 cut(s) 214, 282
BssAI RCCGGY 1 cut(s) 99
BssECI CCNNGG 6 cut(s) 171, 405, 469, 579, 633, 655
BssMI GATC 1 cut(s) 23
BssNI GRCGYC 1 cut(s) 372
BssT1I CCWWGG 4 cut(s) 171, 405, 579, 633
Bst2UI CCWGG 2 cut(s) 58, 348
Bst4CI ACNGT 2 cut(s) 656, 703
BstACI GRCGYC 1 cut(s) 372
BstC8I GCNNGC 2 cut(s) 101, 761
BstDEI CTNAG 1 cut(s) 852
BstDSI CCRYGG 3 cut(s) 469, 579, 655
BstENI CCTNNNNNAGG 1 cut(s) 829
BstF5I GGATG 5 cut(s) 120, 339, 343, 465, 501
BstHHI GCGC 1 cut(s) 465
BstKTI GATC 1 cut(s) 26
BstMAI GTCTC 1 cut(s) 557
BstMBI GATC 1 cut(s) 23
BstMWI GCNNNNNNNGC 8 cut(s) 67, 84, 100, 176, 185, 462, 471, 677
BstNI CCWGG 2 cut(s) 58, 348
BstNSI RCATGY 1 cut(s) 664
BstSCI CCNGG 2 cut(s) 56, 346
BstV1I GCAGC 3 cut(s) 163, 655, 860
BstV2I GAAGAC 3 cut(s) 264, 270, 442
BstX2I RGATCY 1 cut(s) 23
BstYI RGATCY 1 cut(s) 23
BtgI CCRYGG 3 cut(s) 469, 579, 655
BtsCI GGATG 5 cut(s) 120, 339, 343, 465, 501
BtsIMutI CAGTG 3 cut(s) 207, 399, 699
Cac8I GCNNGC 2 cut(s) 101, 761
CciI TCATGA 1 cut(s) 966
CfoI GCGC 1 cut(s) 465
Cfr10I RCCGGY 1 cut(s) 99
Cfr13I GGNCC 3 cut(s) 412, 552, 789
CseI GACGC 1 cut(s) 380
Csp6I GTAC 1 cut(s) 977
CviAII CATG 6 cut(s) 154, 199, 503, 580, 661, 967
CviQI GTAC 1 cut(s) 977
DdeI CTNAG 1 cut(s) 852
DpnI GATC 1 cut(s) 25
DpnII GATC 1 cut(s) 23
EaeI YGGCCR 2 cut(s) 54, 941
Eco130I CCWWGG 4 cut(s) 171, 405, 579, 633
Eco147I AGGCCT 4 cut(s) 87, 188, 650, 824
Eco47I GGWCC 1 cut(s) 412
Eco88I CYCGRG 1 cut(s) 644
EcoNI CCTNNNNNAGG 1 cut(s) 829
EcoO109I RGGNCCY 1 cut(s) 412
EcoRII CCWGG 2 cut(s) 56, 346
EcoT14I CCWWGG 4 cut(s) 171, 405, 579, 633
ErhI CCWWGG 4 cut(s) 171, 405, 579, 633
FaeI CATG 6 cut(s) 157, 202, 506, 583, 664, 970
FalI AAGNNNNNCTT 2 cut(s) 743, 775
FaqI GGGAC 1 cut(s) 729
FatI CATG 6 cut(s) 153, 198, 502, 579, 660, 966
FblI GTMKAC 2 cut(s) 146, 528
Fnu4HI GCNGC 4 cut(s) 177, 669, 788, 849
FokI GGATG 5 cut(s) 127, 330, 346, 452, 508
Fsp4HI GCNGC 4 cut(s) 177, 669, 788, 849
GlaI GCGC 1 cut(s) 464
GluI GCNGC 4 cut(s) 177, 669, 788, 849
GsaI CCCAGC 1 cut(s) 675
HapII CCGG 2 cut(s) 100, 112
HgaI GACGC 1 cut(s) 380
HhaI GCGC 1 cut(s) 465
Hin1I GRCGYC 1 cut(s) 372
Hin1II CATG 6 cut(s) 157, 202, 506, 583, 664, 970
Hin6I GCGC 1 cut(s) 463
HinP1I GCGC 1 cut(s) 463
HinfI GANTC 5 cut(s) 266, 278, 389, 575, 717
HpaII CCGG 2 cut(s) 100, 112
HphI GGTGA 3 cut(s) 208, 826, 892
Hpy166II GTNNAC 4 cut(s) 147, 397, 441, 529
Hpy188I TCNGA 1 cut(s) 277
Hpy188III TCNNGA 4 cut(s) 386, 478, 644, 967
Hpy8I GTNNAC 4 cut(s) 147, 397, 441, 529
HpyAV CCTTC 2 cut(s) 829, 954
HpyCH4III ACNGT 2 cut(s) 656, 703
HpyCH4V TGCA 4 cut(s) 242, 456, 587, 911
HpyF10VI GCNNNNNNNGC 8 cut(s) 67, 84, 100, 176, 185, 462, 471, 677
HpyF3I CTNAG 1 cut(s) 852
Hsp92I GRCGYC 1 cut(s) 372
Hsp92II CATG 6 cut(s) 157, 202, 506, 583, 664, 970
HspAI GCGC 1 cut(s) 463
KroI GCCGGC 1 cut(s) 99
KroNI GCCGGC 1 cut(s) 101
Kzo9I GATC 1 cut(s) 23
Lsp1109I GCAGC 3 cut(s) 163, 655, 860
LweI GCATC 3 cut(s) 474, 497, 736
MaeIII GTNAC 1 cut(s) 214
MalI GATC 1 cut(s) 25
MboI GATC 1 cut(s) 23
MboII GAAGA 4 cut(s) 264, 275, 442, 755
MflI RGATCY 1 cut(s) 23
MluCI AATT 4 cut(s) 16, 36, 48, 162
MlyI GAGTC 3 cut(s) 260, 398, 711
MmeI TCCRAC 1 cut(s) 303
MroNI GCCGGC 1 cut(s) 99
MseI TTAA 3 cut(s) 11, 165, 707
MspA1I CMGCKG 1 cut(s) 851
MspI CCGG 2 cut(s) 100, 112
MspR9I CCNGG 2 cut(s) 58, 348
Mva1269I GAATGC 1 cut(s) 254
MvaI CCWGG 2 cut(s) 58, 348
MwoI GCNNNNNNNGC 8 cut(s) 67, 84, 100, 176, 185, 462, 471, 677
NaeI GCCGGC 1 cut(s) 101
NcoI CCATGG 1 cut(s) 579
NdeII GATC 1 cut(s) 23
NgoMIV GCCGGC 1 cut(s) 99
NlaIII CATG 6 cut(s) 157, 202, 506, 583, 664, 970
NlaIV GGNNCC 1 cut(s) 25
NmuCI GTSAC 1 cut(s) 214
NspI RCATGY 1 cut(s) 664
PaeR7I CTCGAG 1 cut(s) 644
PagI TCATGA 1 cut(s) 966
PceI AGGCCT 4 cut(s) 87, 188, 650, 824
PctI GAATGC 1 cut(s) 254
PdiI GCCGGC 1 cut(s) 101
PfeI GAWTC 2 cut(s) 278, 575
PflFI GACNNNGTC 1 cut(s) 533
PflMI CCANNNNNTGG 1 cut(s) 508
PkrI GCNGC 4 cut(s) 178, 670, 789, 850
PleI GAGTC 3 cut(s) 260, 397, 711
PpsI GAGTC 3 cut(s) 260, 397, 711
PpuMI RGGWCCY 1 cut(s) 412
Psp5II RGGWCCY 1 cut(s) 412
Psp6I CCWGG 2 cut(s) 56, 346
PspFI CCCAGC 1 cut(s) 671
PspGI CCWGG 2 cut(s) 56, 346
PspN4I GGNNCC 1 cut(s) 25
PspPI GGNCC 3 cut(s) 412, 552, 789
PspPPI RGGWCCY 1 cut(s) 412
PsuI RGATCY 1 cut(s) 23
PsyI GACNNNGTC 1 cut(s) 533
PvuII CAGCTG 1 cut(s) 851
RsaI GTAC 1 cut(s) 978
RsaNI GTAC 1 cut(s) 977
SaqAI TTAA 3 cut(s) 11, 165, 707
SatI GCNGC 4 cut(s) 177, 669, 788, 849
Sau3AI GATC 1 cut(s) 23
Sau96I GGNCC 3 cut(s) 412, 552, 789
SchI GAGTC 3 cut(s) 260, 398, 711
ScrFI CCNGG 2 cut(s) 58, 348
SfaNI GCATC 3 cut(s) 474, 497, 736
Sfr274I CTCGAG 1 cut(s) 644
SinI GGWCC 1 cut(s) 412
SlaI CTCGAG 1 cut(s) 644
SmlI CTYRAG 6 cut(s) 182, 416, 476, 560, 644, 764
SmoI CTYRAG 6 cut(s) 182, 416, 476, 560, 644, 764
Sse9I AATT 4 cut(s) 16, 36, 48, 162
SseBI AGGCCT 4 cut(s) 87, 188, 650, 824
SsiI CCGC 3 cut(s) 228, 787, 812
SspI AATATT 1 cut(s) 973
StuI AGGCCT 4 cut(s) 87, 188, 650, 824
StyD4I CCNGG 2 cut(s) 56, 346
StyI CCWWGG 4 cut(s) 171, 405, 579, 633
TaaI ACNGT 2 cut(s) 656, 703
TaqI TCGA 2 cut(s) 491, 645
TasI AATT 4 cut(s) 16, 36, 48, 162
TatI WGTACW 1 cut(s) 976
TauI GCSGC 1 cut(s) 790
TfiI GAWTC 2 cut(s) 278, 575
Tru1I TTAA 3 cut(s) 11, 165, 707
Tru9I TTAA 3 cut(s) 11, 165, 707
TscAI CASTG 3 cut(s) 214, 399, 706
TseFI GTSAC 1 cut(s) 214
TseI GCWGC 3 cut(s) 176, 668, 848
Tsp45I GTSAC 1 cut(s) 214
TspDTI ATGAA 3 cut(s) 80, 350, 983
TspGWI ACGGA 1 cut(s) 458
TspRI CASTG 3 cut(s) 214, 399, 706
Tth111I GACNNNGTC 1 cut(s) 533
Van91I CCANNNNNTGG 1 cut(s) 508
VpaK11BI GGWCC 1 cut(s) 412
XagI CCTNNNNNAGG 1 cut(s) 829
XapI RAATTY 2 cut(s) 16, 48
XceI RCATGY 1 cut(s) 664
XhoI CTCGAG 1 cut(s) 644
XmiI GTMKAC 2 cut(s) 146, 528
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.