RLG00000001132

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000101
Physical Location & Seq
Reverse (-)
10634871 .. 10636077
1207 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001132

Sequence Viewer

Length: 1080 bp
ATGGCTGATGATCTCAAGAGACATGTAATGAAGGTTTTCGAGGATGCAACCAAAGACTGTGTGGATAGAGCAGTGAAAGAACTATTTGACATGGTTCGGGACTACGATTCCCTCAATCGAAATGCGATTATCATGTTCAATTCCATGGCAAATCACGGCATGGTTCACGAAGCCAGAGAGCTCTTTAAGCCTGTCACTGAGCCGGCCACACTGCCGGAAGTGGCCGTATTCACATTCGTGATTTTGGTGTACGCCCATGCCGGCAAGACCAAGGCTGCTCTCAAGGTCTACCACCATATGGGATGCCTTTCTGCAACCTACATAATTGTGTTGGACCTCGTTGCCTACAGAGAACTGGTGGACAAGGCCAAGGAGTTCCTTGGGCAGATAGAAGCTAAGGGTTGGTTAAGCCCTGGCTCCAGTGCTTATCAATTCAAAGAAGGTCACCTCACAGACGCAATGCAGGTAATCAAGATGTATGCTGATCTTGTCAACAACATCGCGGATGAGGATGTGCAAACATTCTTCTGCAAGTCGCACACCTGCCCAGGTGGCGTCAACAAACGGTTGAGGAAGATGCAGAAGGCTTTGAAAGAGGATGGAAATGTAGACGAGATCATAGAGATTTTTAGCACCATTCTTCAGACGGGCATGGAGCCCATGGTCCTACTCCACACCTCCGTTATTGAAGCCTACTTAAAGTTTGGCAAGACCAAAGATGCTCTGGAGGCGTACTGGGGCATGTTAGCTGCTGGGGTGGTCCCCAACTCCTACACTTACACTGTTTTAATCAAGGGACTTACTCCTGACCCCAACTTTTTTGGAGATGCCAAGAAGTGCTTGCTAGAGATGATGGACAAGGGAAAGCAGCCCAATGCTGCTACCTACACTGCAGTGATAGAGGGCTTTGCAAAGCAGGGGAGCAAGGTAGCCGAGGAGGAGGGAAAAGAGTTTGTGGCGGTATTGAGGGATAAGGGGTTCGTGCCTAATGCAAAGGCAATGAGGGATGTTTTAAAGGGCAGACCAACACCTGTTATTAGAAGAGTCATGAGTATTGTCCTTTCCACATTGAAGCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

360

Amino Acids

40.08

Weight (kDa)

7.64

Isoelectric Point (pI)

34.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_24 PF23276 208 - 307 2.9e-07 Fungal tetratrico peptide repeats
PPR_2 PF13041 226 - 267 2.1e-09 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 551
Acc36I ACCTGC 2 cut(s) 454, 551
AccB7I CCANNNNNTGG 1 cut(s) 298
AccI GTMKAC 2 cut(s) 288, 609
AccII CGCG 1 cut(s) 503
AciI CCGC 2 cut(s) 503, 959
AcoI YGGCCR 2 cut(s) 204, 222
AcuI CTGAAG 1 cut(s) 626
AcyI GRCGYC 1 cut(s) 555
AfaI GTAC 2 cut(s) 251, 734
AfiI CCNNNNNNNGG 1 cut(s) 298
AflIII ACRYGT 1 cut(s) 22
AgsI TTSAA 5 cut(s) 139, 436, 592, 689, 1072
AjnI CCWGG 2 cut(s) 412, 547
AleI CACNNNNGTG 2 cut(s) 236, 893
AloI GAACNNNNNNTCC 2 cut(s) 962, 994
AluBI AGCT 3 cut(s) 181, 395, 749
AluI AGCT 3 cut(s) 181, 395, 749
Alw21I GWGCWC 1 cut(s) 183
Alw26I GTCTC 1 cut(s) 13
AoxI GGCC 3 cut(s) 204, 222, 366
ApeKI GCWGC 4 cut(s) 275, 749, 868, 878
Asp700I GAANNNNTTC 1 cut(s) 35
AspS9I GGNCC 3 cut(s) 334, 664, 760
AsuHPI GGTGA 1 cut(s) 437
AvaII GGWCC 3 cut(s) 334, 664, 760
BanII GRGCYC 2 cut(s) 183, 660
Bbv12I GWGCWC 1 cut(s) 183
BbvI GCAGC 4 cut(s) 262, 736, 865, 880
BccI CCATC 2 cut(s) 593, 847
BceAI ACGGC 2 cut(s) 172, 209
BciT130I CCWGG 2 cut(s) 414, 549
BcoDI GTCTC 1 cut(s) 13
BfaI CTAG 1 cut(s) 845
BfmI CTRYAG 2 cut(s) 346, 891
BfuAI ACCTGC 2 cut(s) 454, 551
BglI GCCNNNNNGGC 1 cut(s) 552
BisI GCNGC 4 cut(s) 276, 750, 869, 879
BlsI GCNGC 4 cut(s) 277, 751, 870, 880
Bme1390I CCNGG 2 cut(s) 414, 549
Bme18I GGWCC 3 cut(s) 334, 664, 760
BmgT120I GGNCC 3 cut(s) 334, 664, 760
BmiI GGNNCC 3 cut(s) 418, 657, 762
BmrFI CCNGG 2 cut(s) 414, 549
BmrI ACTGGG 1 cut(s) 745
BmsI GCATC 5 cut(s) 34, 293, 567, 709, 817
BmuI ACTGGG 1 cut(s) 745
BpmI CTGGAG 2 cut(s) 403, 746
Bpu10I CCTNAGC 1 cut(s) 396
BpuEI CTTGAG 1 cut(s) 266
BsaHI GRCGYC 1 cut(s) 555
BsaJI CCNNGG 8 cut(s) 144, 270, 369, 379, 412, 547, 660, 933
Bsc4I CCNNNNNNNGG 1 cut(s) 298
Bse118I RCCGGY 2 cut(s) 202, 260
Bse1I ACTGG 3 cut(s) 360, 420, 740
Bse3DI GCAATG 2 cut(s) 465, 1005
BseBI CCWGG 2 cut(s) 414, 549
BseDI CCNNGG 8 cut(s) 144, 270, 369, 379, 412, 547, 660, 933
BseGI GGATG 6 cut(s) 49, 308, 511, 517, 604, 1012
BseLI CCNNNNNNNGG 1 cut(s) 298
BseMI GCAATG 2 cut(s) 465, 1005
BseMII CTCAG 1 cut(s) 189
BseNI ACTGG 3 cut(s) 360, 420, 740
BseRI GAGGAG 2 cut(s) 950, 953
BseXI GCAGC 4 cut(s) 262, 736, 865, 880
BseYI CCCAGC 1 cut(s) 752
Bsh1236I CGCG 1 cut(s) 503
BshFI GGCC 3 cut(s) 206, 224, 368
BsiHKAI GWGCWC 1 cut(s) 183
BsiSI CCGG 3 cut(s) 203, 215, 261
BslFI GGGAC 3 cut(s) 113, 746, 810
BslI CCNNNNNNNGG 1 cut(s) 298
BsmAI GTCTC 1 cut(s) 13
BsmFI GGGAC 3 cut(s) 113, 746, 810
BsnI GGCC 3 cut(s) 206, 224, 368
Bsp1286I GDGCHC 2 cut(s) 183, 660
Bsp143I GATC 3 cut(s) 10, 484, 615
Bsp19I CCATGG 2 cut(s) 144, 660
BspACI CCGC 2 cut(s) 503, 959
BspANI GGCC 3 cut(s) 206, 224, 368
BspCNI CTCAG 1 cut(s) 190
BspFNI CGCG 1 cut(s) 503
BspHI TCATGA 1 cut(s) 1047
BspLI GGNNCC 3 cut(s) 418, 657, 762
BspMAI CTGCAG 1 cut(s) 895
BspMI ACCTGC 2 cut(s) 454, 551
BsrDI GCAATG 2 cut(s) 465, 1005
BsrFI RCCGGY 2 cut(s) 202, 260
BsrI ACTGG 3 cut(s) 360, 420, 740
BssAI RCCGGY 2 cut(s) 202, 260
BssECI CCNNGG 8 cut(s) 144, 270, 369, 379, 412, 547, 660, 933
BssMI GATC 3 cut(s) 10, 484, 615
BssNI GRCGYC 1 cut(s) 555
BssT1I CCWWGG 5 cut(s) 144, 270, 369, 379, 660
Bst2UI CCWGG 2 cut(s) 414, 549
Bst4CI ACNGT 3 cut(s) 59, 567, 784
Bst6I CTCTTC 1 cut(s) 1036
BstACI GRCGYC 1 cut(s) 555
BstC8I GCNNGC 3 cut(s) 204, 262, 842
BstDEI CTNAG 2 cut(s) 198, 396
BstDSI CCRYGG 2 cut(s) 144, 660
BstEII GGTNACC 1 cut(s) 443
BstF5I GGATG 6 cut(s) 49, 308, 511, 517, 604, 1012
BstFNI CGCG 1 cut(s) 503
BstKTI GATC 3 cut(s) 13, 487, 618
BstMAI GTCTC 1 cut(s) 13
BstMBI GATC 3 cut(s) 10, 484, 615
BstMWI GCNNNNNNNGC 3 cut(s) 187, 552, 728
BstNI CCWGG 2 cut(s) 414, 549
BstNSI RCATGY 2 cut(s) 26, 745
BstPI GGTNACC 1 cut(s) 443
BstSCI CCNGG 2 cut(s) 412, 547
BstSFI CTRYAG 2 cut(s) 346, 891
BstUI CGCG 1 cut(s) 503
BstV1I GCAGC 4 cut(s) 262, 736, 865, 880
BsuRI GGCC 3 cut(s) 206, 224, 368
BtgI CCRYGG 2 cut(s) 144, 660
BtgZI GCGATG 1 cut(s) 484
BtsCI GGATG 6 cut(s) 49, 308, 511, 517, 604, 1012
BtsI GCAGTG 4 cut(s) 78, 209, 888, 900
BtsIMutI CAGTG 7 cut(s) 78, 195, 209, 427, 780, 888, 900
BveI ACCTGC 2 cut(s) 454, 551
Cac8I GCNNGC 3 cut(s) 204, 262, 842
CciI TCATGA 1 cut(s) 1047
Cfr10I RCCGGY 2 cut(s) 202, 260
Cfr13I GGNCC 3 cut(s) 334, 664, 760
CseI GACGC 2 cut(s) 464, 544
Csp6I GTAC 2 cut(s) 250, 733
CviQI GTAC 2 cut(s) 250, 733
DdeI CTNAG 2 cut(s) 198, 396
DpnI GATC 3 cut(s) 12, 486, 617
DpnII GATC 3 cut(s) 10, 484, 615
DraI TTTAAA 1 cut(s) 1014
EaeI YGGCCR 2 cut(s) 204, 222
Eam1104I CTCTTC 1 cut(s) 1036
EarI CTCTTC 1 cut(s) 1036
Ecl136II GAGCTC 1 cut(s) 181
Eco130I CCWWGG 5 cut(s) 144, 270, 369, 379, 660
Eco24I GRGCYC 2 cut(s) 183, 660
Eco47I GGWCC 3 cut(s) 334, 664, 760
Eco53kI GAGCTC 1 cut(s) 181
Eco57I CTGAAG 1 cut(s) 626
Eco91I GGTNACC 1 cut(s) 443
EcoICRI GAGCTC 1 cut(s) 181
EcoO65I GGTNACC 1 cut(s) 443
EcoRII CCWGG 2 cut(s) 412, 547
EcoT14I CCWWGG 5 cut(s) 144, 270, 369, 379, 660
EcoT38I GRGCYC 2 cut(s) 183, 660
ErhI CCWWGG 5 cut(s) 144, 270, 369, 379, 660
FalI AAGNNNNNCTT 2 cut(s) 824, 856
FaqI GGGAC 3 cut(s) 113, 746, 810
FauNDI CATATG 1 cut(s) 297
FblI GTMKAC 2 cut(s) 288, 609
Fnu4HI GCNGC 4 cut(s) 276, 750, 869, 879
FokI GGATG 6 cut(s) 56, 315, 518, 524, 611, 1019
FriOI GRGCYC 2 cut(s) 183, 660
Fsp4HI GCNGC 4 cut(s) 276, 750, 869, 879
FspBI CTAG 1 cut(s) 845
GluI GCNGC 4 cut(s) 276, 750, 869, 879
GsaI CCCAGC 1 cut(s) 756
GsuI CTGGAG 2 cut(s) 403, 746
HaeIII GGCC 3 cut(s) 206, 224, 368
HapII CCGG 3 cut(s) 203, 215, 261
HgaI GACGC 2 cut(s) 464, 544
Hin1I GRCGYC 1 cut(s) 555
HincII GTYRAC 2 cut(s) 493, 559
HindII GTYRAC 2 cut(s) 493, 559
HinfI GANTC 2 cut(s) 107, 1044
HpaII CCGG 3 cut(s) 203, 215, 261
HphI GGTGA 1 cut(s) 437
Hpy166II GTNNAC 7 cut(s) 166, 250, 289, 361, 493, 559, 610
Hpy188I TCNGA 1 cut(s) 645
Hpy188III TCNNGA 8 cut(s) 16, 98, 167, 238, 472, 725, 806, 1048
Hpy8I GTNNAC 7 cut(s) 166, 250, 289, 361, 493, 559, 610
HpyAV CCTTC 3 cut(s) 25, 434, 577
HpyCH4III ACNGT 3 cut(s) 59, 567, 784
HpyCH4V TGCA 9 cut(s) 47, 314, 463, 517, 531, 580, 893, 911, 992
HpyF10VI GCNNNNNNNGC 3 cut(s) 187, 552, 728
HpyF3I CTNAG 2 cut(s) 198, 396
Hsp92I GRCGYC 1 cut(s) 555
KroI GCCGGC 2 cut(s) 202, 260
KroNI GCCGGC 2 cut(s) 204, 262
Kzo9I GATC 3 cut(s) 10, 484, 615
LmnI GCTCC 3 cut(s) 422, 655, 921
Lsp1109I GCAGC 4 cut(s) 262, 736, 865, 880
LweI GCATC 5 cut(s) 34, 293, 567, 709, 817
MaeI CTAG 1 cut(s) 845
MaeIII GTNAC 2 cut(s) 193, 443
MalI GATC 3 cut(s) 12, 486, 617
MboI GATC 3 cut(s) 10, 484, 615
MboII GAAGA 4 cut(s) 517, 586, 632, 1053
MhlI GDGCHC 2 cut(s) 183, 660
MluCI AATT 3 cut(s) 139, 324, 431
MlyI GAGTC 1 cut(s) 1053
MmeI TCCRAC 1 cut(s) 312
MroNI GCCGGC 2 cut(s) 202, 260
MroXI GAANNNNTTC 1 cut(s) 35
MseI TTAA 5 cut(s) 186, 407, 698, 788, 1013
MslI CAYNNNNRTG 3 cut(s) 236, 326, 893
MspI CCGG 3 cut(s) 203, 215, 261
MspR9I CCNGG 2 cut(s) 414, 549
MvaI CCWGG 2 cut(s) 414, 549
MvnI CGCG 1 cut(s) 503
MwoI GCNNNNNNNGC 3 cut(s) 187, 552, 728
NaeI GCCGGC 2 cut(s) 204, 262
NcoI CCATGG 2 cut(s) 144, 660
NdeI CATATG 1 cut(s) 297
NdeII GATC 3 cut(s) 10, 484, 615
NgoMIV GCCGGC 2 cut(s) 202, 260
NlaIV GGNNCC 3 cut(s) 418, 657, 762
NmeAIII GCCGAG 1 cut(s) 958
NmuCI GTSAC 2 cut(s) 193, 443
NspI RCATGY 2 cut(s) 26, 745
OliI CACNNNNGTG 2 cut(s) 236, 893
PagI TCATGA 1 cut(s) 1047
PaqCI CACCTGC 1 cut(s) 551
PciI ACATGT 1 cut(s) 22
PdiI GCCGGC 2 cut(s) 204, 262
PdmI GAANNNNTTC 1 cut(s) 35
PfeI GAWTC 1 cut(s) 107
PflMI CCANNNNNTGG 1 cut(s) 298
PkrI GCNGC 4 cut(s) 277, 751, 870, 880
PleI GAGTC 1 cut(s) 1052
PpsI GAGTC 1 cut(s) 1052
PscI ACATGT 1 cut(s) 22
Psp124BI GAGCTC 1 cut(s) 183
Psp6I CCWGG 2 cut(s) 412, 547
PspEI GGTNACC 1 cut(s) 443
PspFI CCCAGC 1 cut(s) 752
PspGI CCWGG 2 cut(s) 412, 547
PspN4I GGNNCC 3 cut(s) 418, 657, 762
PspPI GGNCC 3 cut(s) 334, 664, 760
PstI CTGCAG 1 cut(s) 895
RsaI GTAC 2 cut(s) 251, 734
RsaNI GTAC 2 cut(s) 250, 733
RseI CAYNNNNRTG 3 cut(s) 236, 326, 893
SacI GAGCTC 1 cut(s) 183
SaqAI TTAA 5 cut(s) 186, 407, 698, 788, 1013
SatI GCNGC 4 cut(s) 276, 750, 869, 879
Sau3AI GATC 3 cut(s) 10, 484, 615
Sau96I GGNCC 3 cut(s) 334, 664, 760
SchI GAGTC 1 cut(s) 1053
ScrFI CCNGG 2 cut(s) 414, 549
SduI GDGCHC 2 cut(s) 183, 660
SfaNI GCATC 5 cut(s) 34, 293, 567, 709, 817
SfcI CTRYAG 2 cut(s) 346, 891
SinI GGWCC 3 cut(s) 334, 664, 760
SmiMI CAYNNNNRTG 3 cut(s) 236, 326, 893
SmlI CTYRAG 2 cut(s) 14, 281
SmoI CTYRAG 2 cut(s) 14, 281
Sse9I AATT 3 cut(s) 139, 324, 431
SsiI CCGC 2 cut(s) 503, 959
SspMI CTAG 1 cut(s) 845
SstI GAGCTC 1 cut(s) 183
StyD4I CCNGG 2 cut(s) 412, 547
StyI CCWWGG 5 cut(s) 144, 270, 369, 379, 660
TaaI ACNGT 3 cut(s) 59, 567, 784
TaqI TCGA 2 cut(s) 39, 118
TasI AATT 3 cut(s) 139, 324, 431
TfiI GAWTC 1 cut(s) 107
Tru1I TTAA 5 cut(s) 186, 407, 698, 788, 1013
Tru9I TTAA 5 cut(s) 186, 407, 698, 788, 1013
TscAI CASTG 7 cut(s) 78, 202, 216, 427, 787, 895, 900
TseFI GTSAC 2 cut(s) 193, 443
TseI GCWGC 4 cut(s) 275, 749, 868, 878
Tsp45I GTSAC 2 cut(s) 193, 443
TspDTI ATGAA 1 cut(s) 44
TspGWI ACGGA 1 cut(s) 670
TspRI CASTG 7 cut(s) 78, 202, 216, 427, 787, 895, 900
Van91I CCANNNNNTGG 1 cut(s) 298
VpaK11BI GGWCC 3 cut(s) 334, 664, 760
XceI RCATGY 2 cut(s) 26, 745
XcmI CCANNNNNNNNNTGG 2 cut(s) 58, 721
XmiI GTMKAC 2 cut(s) 288, 609
XmnI GAANNNNTTC 1 cut(s) 35
XspI CTAG 1 cut(s) 845
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.