RLG00000001083

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000101
Physical Location & Seq
Forward (+)
10194458 .. 10195684
1227 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001083

Sequence Viewer

Length: 1227 bp
ATGGAGGACACTAGTTTCCCCAATTCTTGTGCCGATGACCTCAAGAAACATGTAATGAAGGTTTTCGAGGAGGCCACCAAAGACTGTGAGGACAAGGTCTTGAAAGAAATTCGGGACTACGACTCCCTTAACAAGTATGCCATTCAACTCTTTAATATATTGGCAAATAACACCCTCGCTGAGGAAGCCAAAGAGCTCTTTAAGCCTTGCTCTGAGTCTGCCGTGCTGCCTGATGTTGCCGTCTTCACTATTGTCATTCGGGCCTACGCCTGTGCCGGCAAGACCGAGGCTGCCCTCAAGGTCTACCAGCAGATGATAGCCACCGGTGTCGCCCCCACTTCTTGCACTTACACTATACTCATCACCTCACTTGCAACAGACTCATCTTCTGATGTCAATTTCGTTGGGTATGCCAAGAAGTATTTTTTGGAAATGTTAGATAAGGGGATGAAGCCACATTCTGCCTCCTACATGACTGTGTTCAATGCCATTGCCTGTCGGGAGTCGGTGGAGAAGGCCAGGGAGTTCCTTGAGCAGATACAAGCAAAGGGGTTTACCCCTGAGTCCAAAGTTCATCACTTTGAAGAAGGCCACCTCACTGAAGCAATGAATGCAATGAAGTTGTATGATGATCTTGTCAACAAGACCACTGACAAGAAGATGCAAAAAGTCTTCCGCAAGTGGCGTACAGCCGGTGGCCTTGCCAAGAAAGAGTCATTGGAGATGTTGGGTGCTTTGATAGATGATGGCTATGTAGACGAGGCCAACGAGCTTTGTAAGCGCATTTGTGAGACGGGTGTATATCCCATGGTCACAAATCACACCAGCGTTATTCAAGCCTACCTCAAGTTTGGCAAGACCAAGGGTGCTCTGGAGGCATACCGGGGCATGATAGCTTCAGGGGTTGCTCCAAACTCTTACACTTACACTGTTTTAATCAAGGGACTCACTGTTGACCCCAATTTCTGTGGAGATGCCAAGAAGTGCATTCTCGATATGATGGATAGGGGGATAAGGCCCAATCCTGCTACCTACACTGCAGTGATAGAGGGATTTGCGAAGCAGGAGGACAAGGCAGCTGAGGAGGAGGCCAAAGACTTGGTGGACGTAATGATGAGTAAGGGATTTGTGCCAAATGCAAAGGCTATGATGGAGGTTCTGAAGGGAAGGCCAACTCCTCTTATAAGAAGGGTCATAAACATTGTCCTTTCCAAGTTGAAGGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

409

Amino Acids

45.33

Weight (kDa)

6.63

Isoelectric Point (pI)

30.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 67 - 122 1.4e-07 Pentatricopeptide repeat domain
PPR_2 PF13041 77 - 125 3.3e-12 PPR repeat family
TPR_24 PF23276 272 - 358 7.4e-06 Fungal tetratrico peptide repeats
PPR_2 PF13041 275 - 316 1.8e-10 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1184
AccI GTMKAC 2 cut(s) 303, 756
AciI CCGC 1 cut(s) 676
AcsI RAATTY 1 cut(s) 108
AcuI CTGAAG 3 cut(s) 621, 882, 1181
AfaI GTAC 1 cut(s) 688
AfiI CCNNNNNNNGG 1 cut(s) 181
AflIII ACRYGT 1 cut(s) 49
AgeI ACCGGT 1 cut(s) 323
AgsI TTSAA 6 cut(s) 103, 146, 484, 584, 836, 1219
AhlI ACTAGT 1 cut(s) 11
AjnI CCWGG 1 cut(s) 518
AjuI GAANNNNNNNTTGG 4 cut(s) 410, 442, 701, 733
AleI CACNNNNGTG 1 cut(s) 1040
AluBI AGCT 4 cut(s) 196, 772, 896, 1079
AluI AGCT 4 cut(s) 196, 772, 896, 1079
Alw21I GWGCWC 2 cut(s) 198, 871
Alw26I GTCTC 1 cut(s) 785
AoxI GGCC 9 cut(s) 72, 261, 516, 589, 697, 762, 1016, 1089, 1169
ApeKI GCWGC 3 cut(s) 226, 290, 1076
ApoI RAATTY 1 cut(s) 108
AsiGI ACCGGT 1 cut(s) 323
Asp700I GAANNNNTTC 1 cut(s) 62
AspLEI GCGC 1 cut(s) 783
AspS9I GGNCC 2 cut(s) 261, 1017
AsuC2I CCSGG 1 cut(s) 884
AsuHPI GGTGA 1 cut(s) 355
BanII GRGCYC 1 cut(s) 198
BbsI GAAGAC 2 cut(s) 235, 664
Bbv12I GWGCWC 2 cut(s) 198, 871
BbvCI CCTCAGC 2 cut(s) 180, 1080
BbvI GCAGC 3 cut(s) 213, 277, 1088
BccI CCATC 3 cut(s) 740, 994, 1144
BceAI ACGGC 2 cut(s) 206, 224
BciT130I CCWGG 1 cut(s) 520
BcnI CCSGG 1 cut(s) 884
BcoDI GTCTC 1 cut(s) 785
BcuI ACTAGT 1 cut(s) 11
BfaI CTAG 1 cut(s) 12
BfmI CTRYAG 1 cut(s) 1038
BisI GCNGC 3 cut(s) 227, 291, 1077
BlsI GCNGC 3 cut(s) 228, 292, 1078
Bme1390I CCNGG 2 cut(s) 520, 884
BmgT120I GGNCC 2 cut(s) 261, 1017
BmrFI CCNGG 2 cut(s) 520, 884
BmsI GCATC 2 cut(s) 651, 964
BpiI GAAGAC 2 cut(s) 235, 664
BpmI CTGGAG 1 cut(s) 893
Bpu10I CCTNAGC 2 cut(s) 180, 1080
BpuEI CTTGAG 4 cut(s) 26, 281, 551, 830
BpuMI CCSGG 1 cut(s) 884
BsaJI CCNNGG 5 cut(s) 285, 519, 807, 861, 883
BsaWI WCCGGW 1 cut(s) 323
BsaXI ACNNNNNCTCC 2 cut(s) 107, 137
Bsc4I CCNNNNNNNGG 1 cut(s) 181
Bse118I RCCGGY 3 cut(s) 275, 323, 692
Bse3DI GCAATG 3 cut(s) 489, 612, 621
BseBI CCWGG 1 cut(s) 520
BseDI CCNNGG 5 cut(s) 285, 519, 807, 861, 883
BseGI GGATG 1 cut(s) 453
BseLI CCNNNNNNNGG 1 cut(s) 181
BseMI GCAATG 3 cut(s) 489, 612, 621
BseMII CTCAG 4 cut(s) 171, 204, 552, 1071
BseRI GAGGAG 4 cut(s) 83, 1097, 1100, 1167
BseXI GCAGC 3 cut(s) 213, 277, 1088
BshFI GGCC 9 cut(s) 74, 263, 518, 591, 699, 764, 1018, 1091, 1171
BshTI ACCGGT 1 cut(s) 323
BsiHKAI GWGCWC 2 cut(s) 198, 871
BsiSI CCGG 4 cut(s) 276, 324, 693, 883
BslFI GGGAC 2 cut(s) 128, 957
BslI CCNNNNNNNGG 1 cut(s) 181
BsmAI GTCTC 1 cut(s) 785
BsmBI CGTCTC 1 cut(s) 785
BsmFI GGGAC 2 cut(s) 128, 957
BsmI GAATGC 2 cut(s) 616, 987
BsnI GGCC 9 cut(s) 74, 263, 518, 591, 699, 764, 1018, 1091, 1171
Bsp1286I GDGCHC 2 cut(s) 198, 871
Bsp143I GATC 1 cut(s) 631
Bsp19I CCATGG 1 cut(s) 807
BspACI CCGC 1 cut(s) 676
BspANI GGCC 9 cut(s) 74, 263, 518, 591, 699, 764, 1018, 1091, 1171
BspCNI CTCAG 4 cut(s) 172, 205, 553, 1072
BspMAI CTGCAG 1 cut(s) 1042
BsrDI GCAATG 3 cut(s) 489, 612, 621
BsrFI RCCGGY 3 cut(s) 275, 323, 692
BssAI RCCGGY 3 cut(s) 275, 323, 692
BssECI CCNNGG 5 cut(s) 285, 519, 807, 861, 883
BssMI GATC 1 cut(s) 631
BssT1I CCWWGG 2 cut(s) 807, 861
Bst2UI CCWGG 1 cut(s) 520
Bst4CI ACNGT 4 cut(s) 86, 478, 931, 952
BstAPI GCANNNNNTGC 1 cut(s) 611
BstC8I GCNNGC 1 cut(s) 277
BstDEI CTNAG 4 cut(s) 180, 213, 561, 1080
BstDSI CCRYGG 1 cut(s) 807
BstENI CCTNNNNNAGG 1 cut(s) 179
BstF5I GGATG 1 cut(s) 453
BstHHI GCGC 1 cut(s) 783
BstKTI GATC 1 cut(s) 634
BstMAI GTCTC 1 cut(s) 785
BstMBI GATC 1 cut(s) 631
BstMWI GCNNNNNNNGC 5 cut(s) 185, 202, 611, 778, 875
BstNI CCWGG 1 cut(s) 520
BstNSI RCATGY 1 cut(s) 53
BstSCI CCNGG 2 cut(s) 518, 882
BstSFI CTRYAG 1 cut(s) 1038
BstV1I GCAGC 3 cut(s) 213, 277, 1088
BstV2I GAAGAC 2 cut(s) 235, 664
BstXI CCANNNNNNTGG 1 cut(s) 1099
BsuRI GGCC 9 cut(s) 74, 263, 518, 591, 699, 764, 1018, 1091, 1171
BtgI CCRYGG 1 cut(s) 807
BtsCI GGATG 1 cut(s) 453
BtsI GCAGTG 2 cut(s) 1035, 1047
BtsIMutI CAGTG 6 cut(s) 597, 648, 927, 948, 1035, 1047
Cac8I GCNNGC 1 cut(s) 277
CfoI GCGC 1 cut(s) 783
Cfr10I RCCGGY 3 cut(s) 275, 323, 692
Cfr13I GGNCC 2 cut(s) 261, 1017
Csp6I GTAC 1 cut(s) 687
CspAI ACCGGT 1 cut(s) 323
CspCI CAANNNNNGTGG 2 cut(s) 949, 984
CviAII CATG 4 cut(s) 50, 472, 808, 889
CviQI GTAC 1 cut(s) 687
DdeI CTNAG 4 cut(s) 180, 213, 561, 1080
DpnI GATC 1 cut(s) 633
DpnII GATC 1 cut(s) 631
Ecl136II GAGCTC 1 cut(s) 196
Eco130I CCWWGG 2 cut(s) 807, 861
Eco24I GRGCYC 1 cut(s) 198
Eco53kI GAGCTC 1 cut(s) 196
Eco57I CTGAAG 3 cut(s) 621, 882, 1181
EcoICRI GAGCTC 1 cut(s) 196
EcoNI CCTNNNNNAGG 1 cut(s) 179
EcoRII CCWGG 1 cut(s) 518
EcoT14I CCWWGG 2 cut(s) 807, 861
EcoT38I GRGCYC 1 cut(s) 198
ErhI CCWWGG 2 cut(s) 807, 861
Esp3I CGTCTC 1 cut(s) 785
FaeI CATG 4 cut(s) 53, 475, 811, 892
FaqI GGGAC 2 cut(s) 128, 957
FatI CATG 4 cut(s) 49, 471, 807, 888
FblI GTMKAC 2 cut(s) 303, 756
Fnu4HI GCNGC 3 cut(s) 227, 291, 1077
FokI GGATG 1 cut(s) 460
FriOI GRGCYC 1 cut(s) 198
Fsp4HI GCNGC 3 cut(s) 227, 291, 1077
FspBI CTAG 1 cut(s) 12
GlaI GCGC 1 cut(s) 782
GluI GCNGC 3 cut(s) 227, 291, 1077
GsuI CTGGAG 1 cut(s) 893
HaeIII GGCC 9 cut(s) 74, 263, 518, 591, 699, 764, 1018, 1091, 1171
HapII CCGG 4 cut(s) 276, 324, 693, 883
HhaI GCGC 1 cut(s) 783
Hin1II CATG 4 cut(s) 53, 475, 811, 892
Hin6I GCGC 1 cut(s) 781
HinP1I GCGC 1 cut(s) 781
HincII GTYRAC 2 cut(s) 640, 955
HindII GTYRAC 2 cut(s) 640, 955
HinfI GANTC 7 cut(s) 122, 215, 380, 503, 563, 713, 945
HpaII CCGG 4 cut(s) 276, 324, 693, 883
HphI GGTGA 1 cut(s) 355
Hpy166II GTNNAC 6 cut(s) 304, 555, 640, 757, 955, 1105
Hpy188I TCNGA 3 cut(s) 214, 391, 1161
Hpy188III TCNNGA 6 cut(s) 43, 100, 113, 500, 872, 992
Hpy8I GTNNAC 6 cut(s) 304, 555, 640, 757, 955, 1105
HpyAV CCTTC 7 cut(s) 52, 508, 581, 1156, 1161, 1182, 1213
HpyCH4III ACNGT 4 cut(s) 86, 478, 931, 952
HpyCH4IV ACGT 1 cut(s) 1107
HpyCH4V TGCA 7 cut(s) 345, 374, 614, 664, 987, 1040, 1139
HpyF10VI GCNNNNNNNGC 5 cut(s) 185, 202, 611, 778, 875
HpyF3I CTNAG 4 cut(s) 180, 213, 561, 1080
HpySE526I ACGT 1 cut(s) 1107
Hsp92II CATG 4 cut(s) 53, 475, 811, 892
HspAI GCGC 1 cut(s) 781
KroI GCCGGC 1 cut(s) 275
KroNI GCCGGC 1 cut(s) 277
Kzo9I GATC 1 cut(s) 631
LmnI GCTCC 1 cut(s) 913
Lsp1109I GCAGC 3 cut(s) 213, 277, 1088
LweI GCATC 2 cut(s) 651, 964
MaeI CTAG 1 cut(s) 12
MaeII ACGT 1 cut(s) 1107
MaeIII GTNAC 1 cut(s) 811
MalI GATC 1 cut(s) 633
MboI GATC 1 cut(s) 631
MboII GAAGA 5 cut(s) 235, 378, 596, 664, 670
MhlI GDGCHC 2 cut(s) 198, 871
MluCI AATT 4 cut(s) 22, 108, 397, 961
MlyI GAGTC 7 cut(s) 116, 224, 374, 512, 572, 722, 939
MroNI GCCGGC 1 cut(s) 275
MroXI GAANNNNTTC 1 cut(s) 62
MseI TTAA 4 cut(s) 129, 153, 201, 935
MslI CAYNNNNRTG 2 cut(s) 476, 1040
MspA1I CMGCKG 1 cut(s) 1079
MspI CCGG 4 cut(s) 276, 324, 693, 883
MspR9I CCNGG 2 cut(s) 520, 884
Mva1269I GAATGC 2 cut(s) 616, 987
MvaI CCWGG 1 cut(s) 520
MwoI GCNNNNNNNGC 5 cut(s) 185, 202, 611, 778, 875
NaeI GCCGGC 1 cut(s) 277
NciI CCSGG 1 cut(s) 884
NcoI CCATGG 1 cut(s) 807
NdeII GATC 1 cut(s) 631
NgoMIV GCCGGC 1 cut(s) 275
NlaIII CATG 4 cut(s) 53, 475, 811, 892
NmuCI GTSAC 1 cut(s) 811
NspI RCATGY 1 cut(s) 53
OliI CACNNNNGTG 1 cut(s) 1040
PciI ACATGT 1 cut(s) 49
PcsI WCGNNNNNNNCGW 1 cut(s) 765
PctI GAATGC 2 cut(s) 616, 987
PdiI GCCGGC 1 cut(s) 277
PdmI GAANNNNTTC 1 cut(s) 62
PflFI GACNNNGTC 1 cut(s) 95
PinAI ACCGGT 1 cut(s) 323
PkrI GCNGC 3 cut(s) 228, 292, 1078
PleI GAGTC 7 cut(s) 116, 223, 374, 511, 571, 721, 939
PpsI GAGTC 7 cut(s) 116, 223, 374, 511, 571, 721, 939
PscI ACATGT 1 cut(s) 49
PsiI TTATAA 1 cut(s) 1184
Psp124BI GAGCTC 1 cut(s) 198
Psp6I CCWGG 1 cut(s) 518
PspGI CCWGG 1 cut(s) 518
PspPI GGNCC 2 cut(s) 261, 1017
PstI CTGCAG 1 cut(s) 1042
PsyI GACNNNGTC 1 cut(s) 95
PvuII CAGCTG 1 cut(s) 1079
RsaI GTAC 1 cut(s) 688
RsaNI GTAC 1 cut(s) 687
RseI CAYNNNNRTG 2 cut(s) 476, 1040
SacI GAGCTC 1 cut(s) 198
SaqAI TTAA 4 cut(s) 129, 153, 201, 935
SatI GCNGC 3 cut(s) 227, 291, 1077
Sau3AI GATC 1 cut(s) 631
Sau96I GGNCC 2 cut(s) 261, 1017
SchI GAGTC 7 cut(s) 116, 224, 374, 512, 572, 722, 939
ScrFI CCNGG 2 cut(s) 520, 884
SduI GDGCHC 2 cut(s) 198, 871
SfaNI GCATC 2 cut(s) 651, 964
SfcI CTRYAG 1 cut(s) 1038
SgrAI CRCCGGYG 1 cut(s) 323
SmiMI CAYNNNNRTG 2 cut(s) 476, 1040
SmlI CTYRAG 4 cut(s) 41, 296, 530, 845
SmoI CTYRAG 4 cut(s) 41, 296, 530, 845
SpeI ACTAGT 1 cut(s) 11
Sse9I AATT 4 cut(s) 22, 108, 397, 961
SsiI CCGC 1 cut(s) 676
SspMI CTAG 1 cut(s) 12
SstI GAGCTC 1 cut(s) 198
StyD4I CCNGG 2 cut(s) 518, 882
StyI CCWWGG 2 cut(s) 807, 861
TaaI ACNGT 4 cut(s) 86, 478, 931, 952
TaiI ACGT 1 cut(s) 1110
TaqI TCGA 2 cut(s) 66, 993
TaqII GACCGA 1 cut(s) 299
TasI AATT 4 cut(s) 22, 108, 397, 961
Tru1I TTAA 4 cut(s) 129, 153, 201, 935
Tru9I TTAA 4 cut(s) 129, 153, 201, 935
TscAI CASTG 6 cut(s) 604, 655, 934, 955, 1042, 1047
TseFI GTSAC 1 cut(s) 811
TseI GCWGC 3 cut(s) 226, 290, 1076
Tsp45I GTSAC 1 cut(s) 811
TspDTI ATGAA 5 cut(s) 71, 464, 563, 623, 632
TspRI CASTG 6 cut(s) 604, 655, 934, 955, 1042, 1047
Tth111I GACNNNGTC 1 cut(s) 95
XagI CCTNNNNNAGG 1 cut(s) 179
XapI RAATTY 1 cut(s) 108
XceI RCATGY 1 cut(s) 53
XcmI CCANNNNNNNNNTGG 2 cut(s) 868, 1099
XmiI GTMKAC 2 cut(s) 303, 756
XmnI GAANNNNTTC 1 cut(s) 62
XspI CTAG 1 cut(s) 12
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.