RchiOBHm_Chr7g0236191

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000101
Physical Location & Seq
Forward (+)
61052397 .. 61053219
823 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ21165

Sequence Viewer

Length: 822 bp
ATGACTGTGATCGAGGACATTTTCTTGAAAAAACAGTTTGAGATGCTTGGTGACTATGGATCCCTTAACAATTATGCGATTTTGGTGTTCGATTCTATGGCGAATTCCGGCATGCCTGACGAAGCCAAAGAGCTCTTTAAGCCTCGCTCTGAGTTGGCCGTGCTGCCTGATGTGGCTGTCTTCACCATTGTCATTCGATGCTATGCCTATGCTGGAAAGACCAAGGCTGCTCTCAGGGTGTACCACCACATGTTAGCCAGTGGTGTCGCCCCCGCCTCGGTTACTTACTCTATACTCATCACGGCACTTGCAAAAGACTCACCTTCTGATGTCACTTTCGTTGGGTATGCCAAGAAGTACTTTTTGGAAATGTTGGATAAGGGAATGAAGCCCCATTCTGCCTCCTACACGACTGTGTTCGACGCCATTGCCTGCCGGGAGTCAGTGGAGAAGGCCAGGGAGTTCCTTGAGCAGATACAAGCAAAGGGGTTTGTCCCTGAGTCCAAAAATTTTCAGTTTGAAGAAACCCACCTTGCAGAAGCAATGAAGGGAATGAAGATGTATGATGATCTTGTCAACAATACCACCGACAAGAATGTGCAAAAAGTATTCCGCACGTGGCGCACCAAGCCGGGTTGCCTCTACAAAAATTCGTTGAAGATGTACAAGGCTTTGATTGAGGATGGCAGTGCAGACCAGGCCATGGAGCTTTATAAGCGCGTTGTTGAGATGGGTATACAGCCCATGGTTGTAGTCCACACCTCCGTTATTGAAGCCTATCTCAAGTTTGGCAAGACCAAGGGTGCTCTGGGGGCGTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

273

Amino Acids

30.63

Weight (kDa)

8.22

Isoelectric Point (pI)

36.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 55 - 103 8.3e-07 Pentatricopeptide repeat domain
PPR_2 PF13041 56 - 105 2.2e-12 PPR repeat family
PPR_long PF17177 75 - 189 4.5e-06 Pentacotripeptide-repeat region of PRORP
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 714
AccB7I CCANNNNNTGG 1 cut(s) 703
AccI GTMKAC 1 cut(s) 736
AccII CGCG 1 cut(s) 720
AciI CCGC 2 cut(s) 273, 613
AclWI GGATC 2 cut(s) 54, 67
AcoI YGGCCR 1 cut(s) 156
AcsI RAATTY 3 cut(s) 103, 508, 649
AcvI CACGTG 1 cut(s) 618
AcyI GRCGYC 1 cut(s) 423
AfaI GTAC 4 cut(s) 242, 359, 665, 818
AfiI CCNNNNNNNGG 2 cut(s) 277, 703
AflIII ACRYGT 1 cut(s) 249
AgsI TTSAA 4 cut(s) 28, 521, 658, 773
AjnI CCWGG 2 cut(s) 455, 696
AjuI GAANNNNNNNTTGG 2 cut(s) 347, 379
AleI CACNNNNGTG 1 cut(s) 413
AluBI AGCT 2 cut(s) 133, 709
AluI AGCT 2 cut(s) 133, 709
Alw21I GWGCWC 2 cut(s) 135, 808
AlwI GGATC 2 cut(s) 54, 67
AoxI GGCC 3 cut(s) 156, 453, 699
ApeKI GCWGC 2 cut(s) 163, 227
ApoI RAATTY 3 cut(s) 103, 508, 649
AspLEI GCGC 2 cut(s) 624, 720
AsuC2I CCSGG 2 cut(s) 437, 633
AsuHPI GGTGA 3 cut(s) 62, 175, 312
BamHI GGATCC 1 cut(s) 59
BanII GRGCYC 1 cut(s) 135
BbrPI CACGTG 1 cut(s) 618
BbsI GAAGAC 1 cut(s) 172
Bbv12I GWGCWC 2 cut(s) 135, 808
BbvI GCAGC 2 cut(s) 150, 214
BccI CCATC 2 cut(s) 677, 724
BceAI ACGGC 2 cut(s) 143, 318
BcgI CGANNNNNNTGC 2 cut(s) 410, 444
BciT130I CCWGG 2 cut(s) 457, 698
BcnI CCSGG 2 cut(s) 437, 633
BfaI CTAG 1 cut(s) 820
BisI GCNGC 2 cut(s) 164, 228
BlsI GCNGC 2 cut(s) 165, 229
BmcAI AGTACT 1 cut(s) 359
Bme1390I CCNGG 4 cut(s) 437, 457, 633, 698
BmiI GGNNCC 1 cut(s) 61
BmrFI CCNGG 4 cut(s) 437, 457, 633, 698
BmsI GCATC 2 cut(s) 33, 188
BpiI GAAGAC 1 cut(s) 172
BpuEI CTTGAG 2 cut(s) 488, 767
BpuMI CCSGG 2 cut(s) 437, 633
BsaAI YACGTR 1 cut(s) 618
BsaHI GRCGYC 1 cut(s) 423
BsaJI CCNNGG 6 cut(s) 222, 276, 456, 702, 744, 798
Bsc4I CCNNNNNNNGG 2 cut(s) 277, 703
Bse1I ACTGG 1 cut(s) 258
Bse3DI GCAATG 2 cut(s) 426, 549
BseBI CCWGG 2 cut(s) 457, 698
BseDI CCNNGG 6 cut(s) 222, 276, 456, 702, 744, 798
BseGI GGATG 1 cut(s) 688
BseLI CCNNNNNNNGG 2 cut(s) 277, 703
BseMI GCAATG 2 cut(s) 426, 549
BseMII CTCAG 3 cut(s) 141, 247, 489
BseNI ACTGG 1 cut(s) 258
BseXI GCAGC 2 cut(s) 150, 214
BsgI GTGCAG 1 cut(s) 711
Bsh1236I CGCG 1 cut(s) 720
BshFI GGCC 3 cut(s) 158, 455, 701
BsiHKAI GWGCWC 2 cut(s) 135, 808
BsiSI CCGG 3 cut(s) 108, 436, 632
BslFI GGGAC 1 cut(s) 479
BslI CCNNNNNNNGG 2 cut(s) 277, 703
BsmFI GGGAC 1 cut(s) 479
BsnI GGCC 3 cut(s) 158, 455, 701
Bsp1286I GDGCHC 2 cut(s) 135, 808
Bsp1407I TGTACA 1 cut(s) 663
Bsp143I GATC 3 cut(s) 9, 59, 568
Bsp19I CCATGG 2 cut(s) 702, 744
BspACI CCGC 2 cut(s) 273, 613
BspANI GGCC 3 cut(s) 158, 455, 701
BspCNI CTCAG 3 cut(s) 142, 246, 490
BspFNI CGCG 1 cut(s) 720
BspLI GGNNCC 1 cut(s) 61
BspPI GGATC 2 cut(s) 54, 67
BsrDI GCAATG 2 cut(s) 426, 549
BsrGI TGTACA 1 cut(s) 663
BsrI ACTGG 1 cut(s) 258
BssECI CCNNGG 6 cut(s) 222, 276, 456, 702, 744, 798
BssMI GATC 3 cut(s) 9, 59, 568
BssNAI GTATAC 1 cut(s) 737
BssNI GRCGYC 1 cut(s) 423
BssT1I CCWWGG 4 cut(s) 222, 702, 744, 798
Bst1107I GTATAC 1 cut(s) 737
Bst2UI CCWGG 2 cut(s) 457, 698
Bst4CI ACNGT 3 cut(s) 7, 36, 415
BstACI GRCGYC 1 cut(s) 423
BstAUI TGTACA 1 cut(s) 663
BstBAI YACGTR 1 cut(s) 618
BstC8I GCNNGC 2 cut(s) 113, 433
BstDEI CTNAG 3 cut(s) 150, 233, 498
BstDSI CCRYGG 2 cut(s) 702, 744
BstF5I GGATG 1 cut(s) 688
BstFNI CGCG 1 cut(s) 720
BstHHI GCGC 2 cut(s) 624, 720
BstKTI GATC 3 cut(s) 12, 62, 571
BstMBI GATC 3 cut(s) 9, 59, 568
BstMWI GCNNNNNNNGC 6 cut(s) 139, 621, 628, 698, 715, 812
BstNI CCWGG 2 cut(s) 457, 698
BstNSI RCATGY 2 cut(s) 115, 253
BstSCI CCNGG 4 cut(s) 435, 455, 631, 696
BstUI CGCG 1 cut(s) 720
BstV1I GCAGC 2 cut(s) 150, 214
BstV2I GAAGAC 1 cut(s) 172
BstX2I RGATCY 1 cut(s) 59
BstYI RGATCY 1 cut(s) 59
BstZ17I GTATAC 1 cut(s) 737
BsuRI GGCC 3 cut(s) 158, 455, 701
BtgI CCRYGG 2 cut(s) 702, 744
BtsCI GGATG 1 cut(s) 688
BtsI GCAGTG 1 cut(s) 694
BtsIMutI CAGTG 3 cut(s) 265, 450, 694
Cac8I GCNNGC 2 cut(s) 113, 433
CfoI GCGC 2 cut(s) 624, 720
CseI GACGC 1 cut(s) 431
Csp6I GTAC 4 cut(s) 241, 358, 664, 817
CviAII CATG 4 cut(s) 112, 250, 703, 745
CviQI GTAC 4 cut(s) 241, 358, 664, 817
DdeI CTNAG 3 cut(s) 150, 233, 498
DpnI GATC 3 cut(s) 11, 61, 570
DpnII GATC 3 cut(s) 9, 59, 568
EaeI YGGCCR 1 cut(s) 156
Ecl136II GAGCTC 1 cut(s) 133
Eco130I CCWWGG 4 cut(s) 222, 702, 744, 798
Eco24I GRGCYC 1 cut(s) 135
Eco53kI GAGCTC 1 cut(s) 133
Eco72I CACGTG 1 cut(s) 618
EcoICRI GAGCTC 1 cut(s) 133
EcoRI GAATTC 1 cut(s) 103
EcoRII CCWGG 2 cut(s) 455, 696
EcoT14I CCWWGG 4 cut(s) 222, 702, 744, 798
EcoT38I GRGCYC 1 cut(s) 135
ErhI CCWWGG 4 cut(s) 222, 702, 744, 798
FaeI CATG 4 cut(s) 115, 253, 706, 748
FalI AAGNNNNNCTT 2 cut(s) 344, 376
FaqI GGGAC 1 cut(s) 479
FatI CATG 4 cut(s) 111, 249, 702, 744
FauI CCCGC 1 cut(s) 280
FblI GTMKAC 1 cut(s) 736
Fnu4HI GCNGC 2 cut(s) 164, 228
FokI GGATG 1 cut(s) 695
FriOI GRGCYC 1 cut(s) 135
Fsp4HI GCNGC 2 cut(s) 164, 228
FspBI CTAG 1 cut(s) 820
GlaI GCGC 2 cut(s) 623, 719
GluI GCNGC 2 cut(s) 164, 228
HaeIII GGCC 3 cut(s) 158, 455, 701
HapII CCGG 3 cut(s) 108, 436, 632
HgaI GACGC 1 cut(s) 431
HhaI GCGC 2 cut(s) 624, 720
Hin1I GRCGYC 1 cut(s) 423
Hin1II CATG 4 cut(s) 115, 253, 706, 748
Hin6I GCGC 2 cut(s) 622, 718
HinP1I GCGC 2 cut(s) 622, 718
HincII GTYRAC 1 cut(s) 577
HindII GTYRAC 1 cut(s) 577
HinfI GANTC 4 cut(s) 92, 317, 440, 500
HpaII CCGG 3 cut(s) 108, 436, 632
HphI GGTGA 3 cut(s) 62, 175, 312
Hpy166II GTNNAC 4 cut(s) 241, 577, 737, 757
Hpy188I TCNGA 2 cut(s) 151, 328
Hpy188III TCNNGA 1 cut(s) 25
Hpy8I GTNNAC 4 cut(s) 241, 577, 737, 757
Hpy99I CGWCG 1 cut(s) 425
HpyAV CCTTC 3 cut(s) 333, 445, 541
HpyCH4III ACNGT 3 cut(s) 7, 36, 415
HpyCH4IV ACGT 1 cut(s) 617
HpyCH4V TGCA 4 cut(s) 311, 536, 601, 692
HpyF10VI GCNNNNNNNGC 6 cut(s) 139, 621, 628, 698, 715, 812
HpyF3I CTNAG 3 cut(s) 150, 233, 498
HpySE526I ACGT 1 cut(s) 617
Hsp92I GRCGYC 1 cut(s) 423
Hsp92II CATG 4 cut(s) 115, 253, 706, 748
HspAI GCGC 2 cut(s) 622, 718
Kzo9I GATC 3 cut(s) 9, 59, 568
LmnI GCTCC 1 cut(s) 706
Lsp1109I GCAGC 2 cut(s) 150, 214
LweI GCATC 2 cut(s) 33, 188
MaeI CTAG 1 cut(s) 820
MaeII ACGT 1 cut(s) 617
MaeIII GTNAC 3 cut(s) 50, 280, 331
MalI GATC 3 cut(s) 11, 61, 570
MboI GATC 3 cut(s) 9, 59, 568
MboII GAAGA 4 cut(s) 172, 533, 568, 670
MflI RGATCY 1 cut(s) 59
MhlI GDGCHC 2 cut(s) 135, 808
MluCI AATT 4 cut(s) 70, 103, 508, 649
MlyI GAGTC 3 cut(s) 311, 449, 509
MmeI TCCRAC 1 cut(s) 354
MnlI CCTC 7 cut(s) 7, 153, 286, 412, 650, 673, 772
MseI TTAA 2 cut(s) 66, 138
MslI CAYNNNNRTG 1 cut(s) 413
MspI CCGG 3 cut(s) 108, 436, 632
MspR9I CCNGG 4 cut(s) 437, 457, 633, 698
MvaI CCWGG 2 cut(s) 457, 698
MvnI CGCG 1 cut(s) 720
MwoI GCNNNNNNNGC 6 cut(s) 139, 621, 628, 698, 715, 812
NciI CCSGG 2 cut(s) 437, 633
NcoI CCATGG 2 cut(s) 702, 744
NdeII GATC 3 cut(s) 9, 59, 568
NlaIII CATG 4 cut(s) 115, 253, 706, 748
NlaIV GGNNCC 1 cut(s) 61
NmuCI GTSAC 2 cut(s) 50, 331
NspI RCATGY 2 cut(s) 115, 253
OliI CACNNNNGTG 1 cut(s) 413
PaeI GCATGC 1 cut(s) 115
PciI ACATGT 1 cut(s) 249
PfeI GAWTC 1 cut(s) 92
PflMI CCANNNNNTGG 1 cut(s) 703
PkrI GCNGC 2 cut(s) 165, 229
PleI GAGTC 3 cut(s) 311, 448, 508
PmaCI CACGTG 1 cut(s) 618
PmlI CACGTG 1 cut(s) 618
PpsI GAGTC 3 cut(s) 311, 448, 508
Ppu21I YACGTR 1 cut(s) 618
PscI ACATGT 1 cut(s) 249
PsiI TTATAA 1 cut(s) 714
Psp124BI GAGCTC 1 cut(s) 135
Psp6I CCWGG 2 cut(s) 455, 696
PspCI CACGTG 1 cut(s) 618
PspGI CCWGG 2 cut(s) 455, 696
PspN4I GGNNCC 1 cut(s) 61
PsuI RGATCY 1 cut(s) 59
RsaI GTAC 4 cut(s) 242, 359, 665, 818
RsaNI GTAC 4 cut(s) 241, 358, 664, 817
RseI CAYNNNNRTG 1 cut(s) 413
SacI GAGCTC 1 cut(s) 135
SaqAI TTAA 2 cut(s) 66, 138
SatI GCNGC 2 cut(s) 164, 228
Sau3AI GATC 3 cut(s) 9, 59, 568
ScaI AGTACT 1 cut(s) 359
SchI GAGTC 3 cut(s) 311, 449, 509
ScrFI CCNGG 4 cut(s) 437, 457, 633, 698
SduI GDGCHC 2 cut(s) 135, 808
SetI ASST 6 cut(s) 135, 325, 534, 620, 711, 764
SfaNI GCATC 2 cut(s) 33, 188
SmiMI CAYNNNNRTG 1 cut(s) 413
SmlI CTYRAG 2 cut(s) 467, 782
SmoI CTYRAG 2 cut(s) 467, 782
SphI GCATGC 1 cut(s) 115
Sse9I AATT 4 cut(s) 70, 103, 508, 649
SsiI CCGC 2 cut(s) 273, 613
SspMI CTAG 1 cut(s) 820
SstI GAGCTC 1 cut(s) 135
StyD4I CCNGG 4 cut(s) 435, 455, 631, 696
StyI CCWWGG 4 cut(s) 222, 702, 744, 798
TaaI ACNGT 3 cut(s) 7, 36, 415
TaiI ACGT 1 cut(s) 620
TaqI TCGA 4 cut(s) 12, 90, 196, 420
TasI AATT 4 cut(s) 70, 103, 508, 649
TatI WGTACW 2 cut(s) 357, 663
TfiI GAWTC 1 cut(s) 92
Tru1I TTAA 2 cut(s) 66, 138
Tru9I TTAA 2 cut(s) 66, 138
TscAI CASTG 3 cut(s) 265, 450, 694
TseFI GTSAC 2 cut(s) 50, 331
TseI GCWGC 2 cut(s) 163, 227
Tsp45I GTSAC 2 cut(s) 50, 331
TspDTI ATGAA 3 cut(s) 401, 560, 569
TspGWI ACGGA 1 cut(s) 754
TspRI CASTG 3 cut(s) 265, 450, 694
Van91I CCANNNNNTGG 1 cut(s) 703
XapI RAATTY 3 cut(s) 103, 508, 649
XceI RCATGY 2 cut(s) 115, 253
XcmI CCANNNNNNNNNTGG 1 cut(s) 805
XmiI GTMKAC 1 cut(s) 736
XspI CTAG 1 cut(s) 820
ZrmI AGTACT 1 cut(s) 359
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.