RchiOBHm_Chr1g0342791

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000101
Physical Location & Seq
Forward (+)
34577304 .. 34578490
1187 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56940

Sequence Viewer

Length: 1146 bp
ATGAAGGTTTTTGAGGAGGTCACCAAAGACTGTGAGGACAAGGAATTAAATGAGATATTTGACATGATTAGGACCTATGATGACCTTAACGAGTATGCAATTTTGGTGTTCGATTGTATGGTAAATGGGAAGCTTGTTGAGGAAGCTAGAGAGCTCTTTAAGCCTCGCTCTATGTCTGCGTCGACTGCTGTACTGCCTGATGTGGCCATCTACACCCTTATCATCTGGGCCTGCATCTCTGCCGGCAAGATCATGGCTGCTCACAAGGTCTACCGGCACATGATAGCCAACGGTGTCCCCCCCACCTCCTGCACTTACATTACACTCATCAACACACTTGCAAATAACTCATCTTCTTATGTCAGTTTTGTTGGGTATGCCAAGAAGTATTTTTTGGAAATGTTGGATAAGGGGATGAAGCCTTATCACACCTCCTACATGGCCGTGTTCAAAGCCATTGCTTGTCGTGAGTCGATGGAGAAGGTCAGGGAGTTCTCTCAGCAGATACAAGCAAGGGGGTTCATCCCTCAGCCCAATGTTCCTTGTTTTGGAGAAGCCAACCTCACAGAAGCAATCAATGCAATGAAGTTGCTTGATGATCTCGTCAACAAGACCACTGACAAGGAGATGCAGAAAGTCTTCTGCAGTTGGCACCCCACCCACCTCAAGAAAGAGGCGGCGAAGATGTTTTCTGCTTTGATAGCGGATGGCAATGTAAGCCTGTTCAGGGAGCTCTATGAGCAAAATTCTGAGACGGACTACCTCAAGGCTGGCAAGACTAAGGGTGCTCTGGAGGCGTACAGGGGCATGCTAGCTTCTGGGGTTGCCCCAAACTCCTATACTTGCCGAGTTTTAATCAAGGGACTCGCTGCTGACCCCCACTTTGTTGTAGATGCCAAGAAGTGCTTGCTTGAGATGATGGACAAGGGAATGAGGCCCAATGCTGCTACCTACACTACAATCATAGGAGGGTTTGCAAGGCAAGAGGACAAGGAAGCCGAGGAGGAAGGTAAACAGTTGGTGGAGGTCATGATGGGTAAGGGGTTTGAGCCAAATGTAAAGGTTATGATGGAGGTTTTAAAGGGAAGACCAAAAGGTATTATAAGAAGGGTCATCAACATTGTTCTTTCCAAGTTGAAGGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

381

Amino Acids

42.77

Weight (kDa)

8.22

Isoelectric Point (pI)

27.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 66 - 115 4.7e-11 PPR repeat family
PPR_3 PF13812 66 - 115 7.9e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 254 - 290 8.5e-07 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1103
AccB1I GGYRCC 1 cut(s) 651
AccI GTMKAC 2 cut(s) 182, 270
AciI CCGC 2 cut(s) 677, 704
AcoI YGGCCR 2 cut(s) 204, 441
AcsI RAATTY 1 cut(s) 745
AfaI GTAC 2 cut(s) 192, 800
AfiI CCNNNNNNNGG 2 cut(s) 548, 727
AgsI TTSAA 2 cut(s) 451, 1138
AjuI GAANNNNNNNTTGG 2 cut(s) 377, 409
AluBI AGCT 5 cut(s) 133, 146, 154, 733, 815
AluI AGCT 5 cut(s) 133, 146, 154, 733, 815
Alw21I GWGCWC 3 cut(s) 156, 735, 790
Alw26I GTCTC 1 cut(s) 746
AoxI GGCC 4 cut(s) 204, 228, 441, 935
ApeKI GCWGC 3 cut(s) 257, 869, 944
ApoI RAATTY 1 cut(s) 745
ArsI GACNNNNNNTTYG 2 cut(s) 866, 898
Asp700I GAANNNNTTC 1 cut(s) 638
AspS9I GGNCC 3 cut(s) 72, 228, 936
AsuHPI GGTGA 1 cut(s) 13
AsuNHI GCTAGC 1 cut(s) 811
AvaII GGWCC 1 cut(s) 72
BalI TGGCCA 1 cut(s) 206
BanI GGYRCC 1 cut(s) 651
BanII GRGCYC 2 cut(s) 156, 735
BbsI GAAGAC 2 cut(s) 631, 1093
Bbv12I GWGCWC 3 cut(s) 156, 735, 790
BbvCI CCTCAGC 1 cut(s) 528
BbvI GCAGC 3 cut(s) 244, 856, 931
BccI CCATC 6 cut(s) 215, 469, 701, 913, 1027, 1063
BceAI ACGGC 1 cut(s) 428
BcoDI GTCTC 1 cut(s) 746
BfaI CTAG 2 cut(s) 147, 812
BfmI CTRYAG 1 cut(s) 643
BisI GCNGC 4 cut(s) 258, 678, 870, 945
BlsI GCNGC 4 cut(s) 259, 679, 871, 946
Bme18I GGWCC 1 cut(s) 72
BmgT120I GGNCC 3 cut(s) 72, 228, 936
BmiI GGNNCC 1 cut(s) 653
BmsI GCATC 3 cut(s) 243, 618, 883
BmtI GCTAGC 1 cut(s) 815
BpiI GAAGAC 2 cut(s) 631, 1093
BpmI CTGGAG 1 cut(s) 812
Bpu10I CCTNAGC 1 cut(s) 528
BpuEI CTTGAG 3 cut(s) 650, 749, 932
BsaJI CCNNGG 1 cut(s) 999
Bsc4I CCNNNNNNNGG 2 cut(s) 548, 727
Bse118I RCCGGY 2 cut(s) 242, 273
Bse3DI GCAATG 3 cut(s) 456, 588, 718
BseDI CCNNGG 1 cut(s) 999
BseGI GGATG 3 cut(s) 420, 522, 712
BseLI CCNNNNNNNGG 2 cut(s) 548, 727
BseMI GCAATG 3 cut(s) 456, 588, 718
BseMII CTCAG 3 cut(s) 512, 542, 741
BseRI GAGGAG 2 cut(s) 29, 1016
BseXI GCAGC 3 cut(s) 244, 856, 931
BsgI GTGCAG 1 cut(s) 295
BshFI GGCC 4 cut(s) 206, 230, 443, 937
BshNI GGYRCC 1 cut(s) 651
BsiHKAI GWGCWC 3 cut(s) 156, 735, 790
BsiSI CCGG 2 cut(s) 243, 274
BslFI GGGAC 2 cut(s) 281, 876
BslI CCNNNNNNNGG 2 cut(s) 548, 727
BsmAI GTCTC 1 cut(s) 746
BsmBI CGTCTC 1 cut(s) 746
BsmFI GGGAC 2 cut(s) 281, 876
BsnI GGCC 4 cut(s) 206, 230, 443, 937
Bsp1286I GDGCHC 3 cut(s) 156, 735, 790
Bsp143I GATC 2 cut(s) 249, 598
BspACI CCGC 2 cut(s) 677, 704
BspANI GGCC 4 cut(s) 206, 230, 443, 937
BspCNI CTCAG 3 cut(s) 511, 541, 742
BspHI TCATGA 1 cut(s) 1029
BspLI GGNNCC 1 cut(s) 653
BspMAI CTGCAG 1 cut(s) 647
BspOI GCTAGC 1 cut(s) 815
BspT107I GGYRCC 1 cut(s) 651
BsrDI GCAATG 3 cut(s) 456, 588, 718
BsrFI RCCGGY 2 cut(s) 242, 273
BssAI RCCGGY 2 cut(s) 242, 273
BssECI CCNNGG 1 cut(s) 999
BssMI GATC 2 cut(s) 249, 598
Bst4CI ACNGT 3 cut(s) 32, 293, 1017
BstAPI GCANNNNNTGC 1 cut(s) 578
BstC8I GCNNGC 6 cut(s) 232, 244, 772, 809, 813, 908
BstDEI CTNAG 4 cut(s) 498, 528, 750, 780
BstEII GGTNACC 1 cut(s) 19
BstF5I GGATG 3 cut(s) 420, 522, 712
BstKTI GATC 2 cut(s) 252, 601
BstMAI GTCTC 1 cut(s) 746
BstMBI GATC 2 cut(s) 249, 598
BstMWI GCNNNNNNNGC 7 cut(s) 160, 185, 578, 701, 717, 739, 794
BstNSI RCATGY 1 cut(s) 811
BstPI GGTNACC 1 cut(s) 19
BstSFI CTRYAG 1 cut(s) 643
BstV1I GCAGC 3 cut(s) 244, 856, 931
BstV2I GAAGAC 2 cut(s) 631, 1093
BsuRI GGCC 4 cut(s) 206, 230, 443, 937
BtsCI GGATG 3 cut(s) 420, 522, 712
BtsIMutI CAGTG 1 cut(s) 615
Cac8I GCNNGC 6 cut(s) 232, 244, 772, 809, 813, 908
CciI TCATGA 1 cut(s) 1029
Cfr10I RCCGGY 2 cut(s) 242, 273
Cfr13I GGNCC 3 cut(s) 72, 228, 936
CseI GACGC 1 cut(s) 168
Csp6I GTAC 2 cut(s) 191, 799
CviAII CATG 6 cut(s) 64, 253, 280, 439, 808, 1030
CviQI GTAC 2 cut(s) 191, 799
DdeI CTNAG 4 cut(s) 498, 528, 750, 780
DpnI GATC 2 cut(s) 251, 600
DpnII GATC 2 cut(s) 249, 598
DraI TTTAAA 1 cut(s) 1080
EaeI YGGCCR 2 cut(s) 204, 441
Ecl136II GAGCTC 2 cut(s) 154, 733
Eco24I GRGCYC 2 cut(s) 156, 735
Eco47I GGWCC 1 cut(s) 72
Eco53kI GAGCTC 2 cut(s) 154, 733
Eco91I GGTNACC 1 cut(s) 19
EcoICRI GAGCTC 2 cut(s) 154, 733
EcoO109I RGGNCCY 1 cut(s) 72
EcoO65I GGTNACC 1 cut(s) 19
EcoT38I GRGCYC 2 cut(s) 156, 735
Esp3I CGTCTC 1 cut(s) 746
FaeI CATG 6 cut(s) 67, 256, 283, 442, 811, 1033
FalI AAGNNNNNCTT 2 cut(s) 890, 922
FaqI GGGAC 2 cut(s) 281, 876
FatI CATG 6 cut(s) 63, 252, 279, 438, 807, 1029
FblI GTMKAC 2 cut(s) 182, 270
Fnu4HI GCNGC 4 cut(s) 258, 678, 870, 945
FokI GGATG 3 cut(s) 427, 509, 719
FriOI GRGCYC 2 cut(s) 156, 735
Fsp4HI GCNGC 4 cut(s) 258, 678, 870, 945
FspBI CTAG 2 cut(s) 147, 812
GluI GCNGC 4 cut(s) 258, 678, 870, 945
GsuI CTGGAG 1 cut(s) 812
HaeIII GGCC 4 cut(s) 206, 230, 443, 937
HapII CCGG 2 cut(s) 243, 274
HgaI GACGC 1 cut(s) 168
Hin1II CATG 6 cut(s) 67, 256, 283, 442, 811, 1033
HincII GTYRAC 2 cut(s) 183, 607
HindII GTYRAC 2 cut(s) 183, 607
HindIII AAGCTT 1 cut(s) 131
HinfI GANTC 2 cut(s) 470, 864
HpaII CCGG 2 cut(s) 243, 274
HphI GGTGA 1 cut(s) 13
Hpy166II GTNNAC 4 cut(s) 183, 271, 607, 1013
Hpy188I TCNGA 1 cut(s) 751
Hpy188III TCNNGA 4 cut(s) 467, 667, 791, 1030
Hpy8I GTNNAC 4 cut(s) 183, 271, 607, 1013
Hpy99I CGWCG 1 cut(s) 184
HpyAV CCTTC 4 cut(s) 475, 1001, 1101, 1132
HpyCH4III ACNGT 3 cut(s) 32, 293, 1017
HpyCH4V TGCA 8 cut(s) 98, 234, 312, 341, 581, 631, 645, 977
HpyF10VI GCNNNNNNNGC 7 cut(s) 160, 185, 578, 701, 717, 739, 794
HpyF3I CTNAG 4 cut(s) 498, 528, 750, 780
Hsp92II CATG 6 cut(s) 67, 256, 283, 442, 811, 1033
KroI GCCGGC 1 cut(s) 242
KroNI GCCGGC 1 cut(s) 244
Kzo9I GATC 2 cut(s) 249, 598
LmnI GCTCC 1 cut(s) 730
Lsp1109I GCAGC 3 cut(s) 244, 856, 931
LweI GCATC 3 cut(s) 243, 618, 883
MaeI CTAG 2 cut(s) 147, 812
MaeIII GTNAC 1 cut(s) 19
MalI GATC 2 cut(s) 251, 600
MboI GATC 2 cut(s) 249, 598
MboII GAAGA 4 cut(s) 345, 631, 694, 1098
MhlI GDGCHC 3 cut(s) 156, 735, 790
MlsI TGGCCA 1 cut(s) 206
MluCI AATT 3 cut(s) 44, 99, 745
MluNI TGGCCA 1 cut(s) 206
MlyI GAGTC 2 cut(s) 479, 858
MmeI TCCRAC 1 cut(s) 384
Mox20I TGGCCA 1 cut(s) 206
MroNI GCCGGC 1 cut(s) 242
MroXI GAANNNNTTC 1 cut(s) 638
MscI TGGCCA 1 cut(s) 206
MseI TTAA 5 cut(s) 47, 87, 159, 854, 1079
MslI CAYNNNNRTG 1 cut(s) 443
Msp20I TGGCCA 1 cut(s) 206
MspI CCGG 2 cut(s) 243, 274
MwoI GCNNNNNNNGC 7 cut(s) 160, 185, 578, 701, 717, 739, 794
NaeI GCCGGC 1 cut(s) 244
NdeII GATC 2 cut(s) 249, 598
NgoMIV GCCGGC 1 cut(s) 242
NheI GCTAGC 1 cut(s) 811
NlaIII CATG 6 cut(s) 67, 256, 283, 442, 811, 1033
NlaIV GGNNCC 1 cut(s) 653
NmeAIII GCCGAG 2 cut(s) 872, 1024
NmuCI GTSAC 1 cut(s) 19
NspI RCATGY 1 cut(s) 811
PaeI GCATGC 1 cut(s) 811
PagI TCATGA 1 cut(s) 1029
PdiI GCCGGC 1 cut(s) 244
PdmI GAANNNNTTC 1 cut(s) 638
PkrI GCNGC 4 cut(s) 259, 679, 871, 946
PleI GAGTC 2 cut(s) 478, 858
PpsI GAGTC 2 cut(s) 478, 858
PpuMI RGGWCCY 1 cut(s) 72
PsiI TTATAA 1 cut(s) 1103
Psp124BI GAGCTC 2 cut(s) 156, 735
Psp5II RGGWCCY 1 cut(s) 72
PspEI GGTNACC 1 cut(s) 19
PspN4I GGNNCC 1 cut(s) 653
PspPI GGNCC 3 cut(s) 72, 228, 936
PspPPI RGGWCCY 1 cut(s) 72
PstI CTGCAG 1 cut(s) 647
RsaI GTAC 2 cut(s) 192, 800
RsaNI GTAC 2 cut(s) 191, 799
RseI CAYNNNNRTG 1 cut(s) 443
SacI GAGCTC 2 cut(s) 156, 735
SalI GTCGAC 1 cut(s) 181
SaqAI TTAA 5 cut(s) 47, 87, 159, 854, 1079
SatI GCNGC 4 cut(s) 258, 678, 870, 945
Sau3AI GATC 2 cut(s) 249, 598
Sau96I GGNCC 3 cut(s) 72, 228, 936
SchI GAGTC 2 cut(s) 479, 858
SduI GDGCHC 3 cut(s) 156, 735, 790
SfaNI GCATC 3 cut(s) 243, 618, 883
SfcI CTRYAG 1 cut(s) 643
SinI GGWCC 1 cut(s) 72
SmiMI CAYNNNNRTG 1 cut(s) 443
SmlI CTYRAG 3 cut(s) 665, 764, 911
SmoI CTYRAG 3 cut(s) 665, 764, 911
SphI GCATGC 1 cut(s) 811
Sse9I AATT 3 cut(s) 44, 99, 745
SsiI CCGC 2 cut(s) 677, 704
SspMI CTAG 2 cut(s) 147, 812
SstI GAGCTC 2 cut(s) 156, 735
TaaI ACNGT 3 cut(s) 32, 293, 1017
TaqI TCGA 3 cut(s) 111, 182, 473
TasI AATT 3 cut(s) 44, 99, 745
TatI WGTACW 1 cut(s) 190
TauI GCSGC 1 cut(s) 680
Tru1I TTAA 5 cut(s) 47, 87, 159, 854, 1079
Tru9I TTAA 5 cut(s) 47, 87, 159, 854, 1079
TscAI CASTG 1 cut(s) 622
TseFI GTSAC 1 cut(s) 19
TseI GCWGC 3 cut(s) 257, 869, 944
Tsp45I GTSAC 1 cut(s) 19
TspDTI ATGAA 4 cut(s) 17, 431, 511, 599
TspGWI ACGGA 1 cut(s) 770
TspRI CASTG 1 cut(s) 622
VpaK11BI GGWCC 1 cut(s) 72
XapI RAATTY 1 cut(s) 745
XceI RCATGY 1 cut(s) 811
XmiI GTMKAC 2 cut(s) 182, 270
XmnI GAANNNNTTC 1 cut(s) 638
XspI CTAG 2 cut(s) 147, 812
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.