FvH4_5g35060

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000101
Physical Location & Seq
Forward (+)
25640891 .. 25642066
1176 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g35060.t1

Sequence Viewer

Length: 1176 bp
ATGAAGGTTTTTAAGGATGCAACGAAAGGCTACGAGCTCGTCTACTATAGATTTCTCACAGTTCAGACCTATGACGACCTTAATGATTATGCACTTTCGGTTTTCGATGGTCTGGCAATTGACGACTTCTATCATGAGCAAGCCAAAGAGCTCTTTAAGCCTCGCTCCGGGTTGCCGGTACTTCCAGACGTGGCCATCCTCACTATGGTCATGATAGCCTACGTCGCTGCGGACGACACCACTGCTGCTGTAAAGGTTTACAAGCAAATGTTAGACACTGGTGTTACCCCTACCTCTTTGACCTACACTGCACTCATCACTGTACTTACGACAGACTCATGTTCTGATGTCAAATATGTCGAGTATGCCAAGAAGTGTTTTTTGGAAATGTTAGACAAGGGGATAAAGCCCCATTCTAGCTCTTACATATCAGTGTTTCAAGCCATTGCCTGCCAGCAGTCGGTGGAAAAGGCCAGGGAGTTTCTTAAGCAGATAAAAGCAAAGGGGTTCATCCCCGAGTCGAACGTTCCTCTTCGCTTTGAAGAAGACAACCTGGCAGAATCAATGAATGCACTTAAGTGGTATGGAGATCTTATCAACAATACAAGTGATAAGGCAATGAGAAAAATCTTCAGCAAGTGGAACTCAAGATACCTCCATAAACAGTCGGAGAAGATGAGTGATGCTTTGTTAAAGGATGGCTATATAGAAGCTTGGAATGACTTCTGTAAGGGTTATGCAACCGGCTTAGTTCCAATGGTGGCACTCGAAACCAGCGTTATTGAAGCCTACATCAACCATGGCAAGACCAAGGGTGCTCTGGAGGCGTACCGGCGCATGTTAGCTACTGGGGTTGCCCCAAACTCCTACACTTATACTGTTCTAATCAAGGGACTCTCTGCTTACCCCAACTTCGTCGGAGATGCCAAGAAGTGCTTGTTAGAGATGATGGGGAGGGGGATTGGGCCCAATACTGCTACCTACACTGCTGTGATAGAGAGCCTCGCAAAGCAGGAGGACAAGGCATCTGAGGAGGAGTGCAAAGAGTTGGTGGATGTGATGATATGCAAAGGGTTTGTGCCAAATGCAAAGGCTATGATGGAGGTTTTAAAGGGAAGACCAAAAGCTGCAATAAGAAGGATCATGAACATTGTTCTTTCCAAGTTGAAGGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

392

Amino Acids

43.75

Weight (kDa)

8.24

Isoelectric Point (pI)

32.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 62 - 109 3.4e-08 PPR repeat family
PPR_long PF17177 77 - 172 2.8e-06 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 258 - 299 4.2e-11 PPR repeat family
TPR_24 PF23276 259 - 341 3e-06 Fungal tetratrico peptide repeats
PPR_long PF17177 269 - 362 1.7e-06 Pentacotripeptide-repeat region of PRORP
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 42
AciI CCGC 1 cut(s) 230
AclI AACGTT 1 cut(s) 525
AclWI GGATC 1 cut(s) 1148
AcoI YGGCCR 1 cut(s) 192
AcuI CTGAAG 1 cut(s) 616
AfaI GTAC 3 cut(s) 180, 324, 830
AfiI CCNNNNNNNGG 3 cut(s) 167, 205, 460
AflII CTTAAG 2 cut(s) 485, 575
AgsI TTSAA 4 cut(s) 440, 542, 785, 1168
AjiI CACGTC 1 cut(s) 190
AjnI CCWGG 2 cut(s) 473, 552
AjuI GAANNNNNNNTTGG 2 cut(s) 365, 397
AleI CACNNNNGTG 2 cut(s) 577, 989
AluBI AGCT 6 cut(s) 37, 151, 420, 713, 845, 1127
AluI AGCT 6 cut(s) 37, 151, 420, 713, 845, 1127
Alw21I GWGCWC 3 cut(s) 39, 153, 820
AlwI GGATC 1 cut(s) 1148
Ama87I CYCGRG 1 cut(s) 515
AoxI GGCC 3 cut(s) 192, 471, 965
ApaI GGGCCC 1 cut(s) 969
ApeKI GCWGC 3 cut(s) 227, 245, 1127
Asp700I GAANNNNTTC 1 cut(s) 722
AspLEI GCGC 1 cut(s) 837
AspS9I GGNCC 2 cut(s) 965, 966
AsuC2I CCSGG 1 cut(s) 169
AvaI CYCGRG 1 cut(s) 515
BaeGI GKGCMC 1 cut(s) 969
BalI TGGCCA 1 cut(s) 194
BanII GRGCYC 3 cut(s) 39, 153, 969
BbsI GAAGAC 2 cut(s) 552, 1123
Bbv12I GWGCWC 3 cut(s) 39, 153, 820
BbvI GCAGC 3 cut(s) 214, 232, 1114
BccI CCATC 5 cut(s) 101, 203, 692, 943, 1093
BcgI CGANNNNNNTGC 2 cut(s) 224, 258
BciT130I CCWGG 2 cut(s) 475, 554
BcnI CCSGG 1 cut(s) 169
BfaI CTAG 1 cut(s) 417
BfmI CTRYAG 1 cut(s) 46
BfrI CTTAAG 2 cut(s) 485, 575
BglII AGATCT 1 cut(s) 589
BisI GCNGC 3 cut(s) 228, 246, 1128
BlsI GCNGC 3 cut(s) 229, 247, 1129
Bme1390I CCNGG 3 cut(s) 169, 475, 554
BmeT110I CYCGRG 1 cut(s) 515
BmgBI CACGTC 1 cut(s) 190
BmgT120I GGNCC 2 cut(s) 965, 966
BmiI GGNNCC 1 cut(s) 967
BmrFI CCNGG 3 cut(s) 169, 475, 554
BmrI ACTGGG 1 cut(s) 858
BmsI GCATC 4 cut(s) 7, 673, 913, 1034
BmuI ACTGGG 1 cut(s) 858
BpiI GAAGAC 2 cut(s) 552, 1123
BpmI CTGGAG 1 cut(s) 842
BpuEI CTTGAG 1 cut(s) 631
BpuMI CCSGG 1 cut(s) 169
BsaJI CCNNGG 3 cut(s) 474, 799, 810
Bsc4I CCNNNNNNNGG 3 cut(s) 167, 205, 460
Bse118I RCCGGY 3 cut(s) 175, 743, 831
Bse1I ACTGG 2 cut(s) 283, 853
Bse3DI GCAATG 2 cut(s) 444, 624
BseBI CCWGG 2 cut(s) 475, 554
BseDI CCNNGG 3 cut(s) 474, 799, 810
BseGI GGATG 5 cut(s) 22, 195, 510, 703, 1060
BseLI CCNNNNNNNGG 3 cut(s) 167, 205, 460
BseMI GCAATG 2 cut(s) 444, 624
BseMII CTCAG 1 cut(s) 1020
BseNI ACTGG 2 cut(s) 283, 853
BseRI GAGGAG 2 cut(s) 1046, 1049
BseSI GKGCMC 1 cut(s) 969
BseXI GCAGC 3 cut(s) 214, 232, 1114
BsgI GTGCAG 1 cut(s) 294
BshFI GGCC 3 cut(s) 194, 473, 967
BsiHKAI GWGCWC 3 cut(s) 39, 153, 820
BsiHKCI CYCGRG 1 cut(s) 515
BsiSI CCGG 4 cut(s) 168, 176, 744, 832
BslFI GGGAC 1 cut(s) 906
BslI CCNNNNNNNGG 3 cut(s) 167, 205, 460
BsmFI GGGAC 1 cut(s) 906
BsmI GAATGC 1 cut(s) 574
BsnI GGCC 3 cut(s) 194, 473, 967
BsoBI CYCGRG 1 cut(s) 515
Bsp120I GGGCCC 1 cut(s) 965
Bsp1286I GDGCHC 4 cut(s) 39, 153, 820, 969
Bsp143I GATC 2 cut(s) 589, 1140
Bsp19I CCATGG 1 cut(s) 799
BspACI CCGC 1 cut(s) 230
BspANI GGCC 3 cut(s) 194, 473, 967
BspCNI CTCAG 1 cut(s) 1021
BspHI TCATGA 3 cut(s) 133, 210, 1143
BspLI GGNNCC 1 cut(s) 967
BspPI GGATC 1 cut(s) 1148
BspTI CTTAAG 2 cut(s) 485, 575
BsrDI GCAATG 2 cut(s) 444, 624
BsrFI RCCGGY 3 cut(s) 175, 743, 831
BsrI ACTGG 2 cut(s) 283, 853
BssAI RCCGGY 3 cut(s) 175, 743, 831
BssECI CCNNGG 3 cut(s) 474, 799, 810
BssMI GATC 2 cut(s) 589, 1140
BssT1I CCWWGG 2 cut(s) 799, 810
Bst2UI CCWGG 2 cut(s) 475, 554
Bst4CI ACNGT 4 cut(s) 61, 322, 666, 880
Bst6I CTCTTC 1 cut(s) 537
BstAFI CTTAAG 2 cut(s) 485, 575
BstC8I GCNNGC 3 cut(s) 141, 451, 455
BstDEI CTNAG 2 cut(s) 748, 1029
BstDSI CCRYGG 1 cut(s) 799
BstF5I GGATG 5 cut(s) 22, 195, 510, 703, 1060
BstHHI GCGC 1 cut(s) 837
BstKTI GATC 2 cut(s) 592, 1143
BstMBI GATC 2 cut(s) 589, 1140
BstMWI GCNNNNNNNGC 3 cut(s) 157, 224, 824
BstNI CCWGG 2 cut(s) 475, 554
BstNSI RCATGY 1 cut(s) 841
BstSCI CCNGG 3 cut(s) 167, 473, 552
BstSFI CTRYAG 1 cut(s) 46
BstSLI GKGCMC 1 cut(s) 969
BstV1I GCAGC 3 cut(s) 214, 232, 1114
BstV2I GAAGAC 2 cut(s) 552, 1123
BstX2I RGATCY 1 cut(s) 589
BstYI RGATCY 1 cut(s) 589
BsuRI GGCC 3 cut(s) 194, 473, 967
BtgI CCRYGG 1 cut(s) 799
BtrI CACGTC 1 cut(s) 190
BtsCI GGATG 5 cut(s) 22, 195, 510, 703, 1060
BtsI GCAGTG 3 cut(s) 240, 306, 984
BtsIMutI CAGTG 6 cut(s) 240, 276, 306, 318, 438, 984
Cac8I GCNNGC 3 cut(s) 141, 451, 455
CciI TCATGA 3 cut(s) 133, 210, 1143
CfoI GCGC 1 cut(s) 837
Cfr10I RCCGGY 3 cut(s) 175, 743, 831
Cfr13I GGNCC 2 cut(s) 965, 966
Csp6I GTAC 3 cut(s) 179, 323, 829
CviAII CATG 6 cut(s) 134, 211, 339, 800, 838, 1144
CviQI GTAC 3 cut(s) 179, 323, 829
DdeI CTNAG 2 cut(s) 748, 1029
DpnI GATC 2 cut(s) 591, 1142
DpnII GATC 2 cut(s) 589, 1140
DraI TTTAAA 1 cut(s) 1110
EaeI YGGCCR 1 cut(s) 192
Eam1104I CTCTTC 1 cut(s) 537
EarI CTCTTC 1 cut(s) 537
Ecl136II GAGCTC 2 cut(s) 37, 151
Eco130I CCWWGG 2 cut(s) 799, 810
Eco24I GRGCYC 3 cut(s) 39, 153, 969
Eco53kI GAGCTC 2 cut(s) 37, 151
Eco57I CTGAAG 1 cut(s) 616
Eco88I CYCGRG 1 cut(s) 515
EcoICRI GAGCTC 2 cut(s) 37, 151
EcoRII CCWGG 2 cut(s) 473, 552
EcoT14I CCWWGG 2 cut(s) 799, 810
EcoT38I GRGCYC 3 cut(s) 39, 153, 969
ErhI CCWWGG 2 cut(s) 799, 810
FaeI CATG 6 cut(s) 137, 214, 342, 803, 841, 1147
FalI AAGNNNNNCTT 2 cut(s) 920, 952
FaqI GGGAC 1 cut(s) 906
FatI CATG 6 cut(s) 133, 210, 338, 799, 837, 1143
FblI GTMKAC 1 cut(s) 42
Fnu4HI GCNGC 3 cut(s) 228, 246, 1128
FokI GGATG 5 cut(s) 29, 182, 497, 710, 1067
FriOI GRGCYC 3 cut(s) 39, 153, 969
Fsp4HI GCNGC 3 cut(s) 228, 246, 1128
FspBI CTAG 1 cut(s) 417
GlaI GCGC 1 cut(s) 836
GluI GCNGC 3 cut(s) 228, 246, 1128
GsuI CTGGAG 1 cut(s) 842
HaeIII GGCC 3 cut(s) 194, 473, 967
HapII CCGG 4 cut(s) 168, 176, 744, 832
HhaI GCGC 1 cut(s) 837
Hin1II CATG 6 cut(s) 137, 214, 342, 803, 841, 1147
Hin6I GCGC 1 cut(s) 835
HinP1I GCGC 1 cut(s) 835
HindIII AAGCTT 1 cut(s) 711
HinfI GANTC 4 cut(s) 335, 518, 560, 894
HpaII CCGG 4 cut(s) 168, 176, 744, 832
Hpy166II GTNNAC 2 cut(s) 43, 259
Hpy188I TCNGA 5 cut(s) 66, 346, 670, 920, 1030
Hpy188III TCNNGA 6 cut(s) 134, 185, 211, 648, 821, 1144
Hpy8I GTNNAC 2 cut(s) 43, 259
Hpy99I CGWCG 2 cut(s) 227, 920
HpyAV CCTTC 2 cut(s) 1131, 1162
HpyCH4III ACNGT 4 cut(s) 61, 322, 666, 880
HpyCH4IV ACGT 3 cut(s) 189, 222, 525
HpyCH4V TGCA 9 cut(s) 20, 92, 311, 572, 740, 1041, 1068, 1088, 1130
HpyF10VI GCNNNNNNNGC 3 cut(s) 157, 224, 824
HpyF3I CTNAG 2 cut(s) 748, 1029
HpySE526I ACGT 3 cut(s) 189, 222, 525
Hsp92II CATG 6 cut(s) 137, 214, 342, 803, 841, 1147
HspAI GCGC 1 cut(s) 835
Kzo9I GATC 2 cut(s) 589, 1140
LmnI GCTCC 1 cut(s) 170
Lsp1109I GCAGC 3 cut(s) 214, 232, 1114
LweI GCATC 4 cut(s) 7, 673, 913, 1034
MaeI CTAG 1 cut(s) 417
MaeII ACGT 3 cut(s) 189, 222, 525
MaeIII GTNAC 1 cut(s) 283
MalI GATC 2 cut(s) 591, 1142
MboI GATC 2 cut(s) 589, 1140
MboII GAAGA 6 cut(s) 524, 554, 557, 622, 685, 1128
MfeI CAATTG 1 cut(s) 117
MflI RGATCY 1 cut(s) 589
MhlI GDGCHC 4 cut(s) 39, 153, 820, 969
MlsI TGGCCA 1 cut(s) 194
MluCI AATT 1 cut(s) 117
MluNI TGGCCA 1 cut(s) 194
MlyI GAGTC 3 cut(s) 329, 527, 888
MmeI TCCRAC 2 cut(s) 648, 898
Mox20I TGGCCA 1 cut(s) 194
MroXI GAANNNNTTC 1 cut(s) 722
MscI TGGCCA 1 cut(s) 194
MseI TTAA 7 cut(s) 12, 81, 156, 486, 576, 692, 1109
MslI CAYNNNNRTG 3 cut(s) 431, 577, 989
Msp20I TGGCCA 1 cut(s) 194
MspCI CTTAAG 2 cut(s) 485, 575
MspI CCGG 4 cut(s) 168, 176, 744, 832
MspR9I CCNGG 3 cut(s) 169, 475, 554
MunI CAATTG 1 cut(s) 117
Mva1269I GAATGC 1 cut(s) 574
MvaI CCWGG 2 cut(s) 475, 554
MwoI GCNNNNNNNGC 3 cut(s) 157, 224, 824
NciI CCSGG 1 cut(s) 169
NcoI CCATGG 1 cut(s) 799
NdeII GATC 2 cut(s) 589, 1140
NlaIII CATG 6 cut(s) 137, 214, 342, 803, 841, 1147
NlaIV GGNNCC 1 cut(s) 967
NspI RCATGY 1 cut(s) 841
OliI CACNNNNGTG 2 cut(s) 577, 989
PagI TCATGA 3 cut(s) 133, 210, 1143
PcsI WCGNNNNNNNCGW 2 cut(s) 231, 774
PctI GAATGC 1 cut(s) 574
PdmI GAANNNNTTC 1 cut(s) 722
PfeI GAWTC 1 cut(s) 560
PkrI GCNGC 3 cut(s) 229, 247, 1129
PleI GAGTC 3 cut(s) 329, 526, 888
PpsI GAGTC 3 cut(s) 329, 526, 888
Psp124BI GAGCTC 2 cut(s) 39, 153
Psp1406I AACGTT 1 cut(s) 525
Psp6I CCWGG 2 cut(s) 473, 552
PspGI CCWGG 2 cut(s) 473, 552
PspN4I GGNNCC 1 cut(s) 967
PspOMI GGGCCC 1 cut(s) 965
PspPI GGNCC 2 cut(s) 965, 966
PsrI GAACNNNNNNTAC 2 cut(s) 635, 667
PsuI RGATCY 1 cut(s) 589
RsaI GTAC 3 cut(s) 180, 324, 830
RsaNI GTAC 3 cut(s) 179, 323, 829
RseI CAYNNNNRTG 3 cut(s) 431, 577, 989
SacI GAGCTC 2 cut(s) 39, 153
SaqAI TTAA 7 cut(s) 12, 81, 156, 486, 576, 692, 1109
SatI GCNGC 3 cut(s) 228, 246, 1128
Sau3AI GATC 2 cut(s) 589, 1140
Sau96I GGNCC 2 cut(s) 965, 966
SchI GAGTC 3 cut(s) 329, 527, 888
ScrFI CCNGG 3 cut(s) 169, 475, 554
SduI GDGCHC 4 cut(s) 39, 153, 820, 969
SfaNI GCATC 4 cut(s) 7, 673, 913, 1034
SfcI CTRYAG 1 cut(s) 46
SmiMI CAYNNNNRTG 3 cut(s) 431, 577, 989
SmlI CTYRAG 3 cut(s) 485, 575, 646
SmoI CTYRAG 3 cut(s) 485, 575, 646
Sse9I AATT 1 cut(s) 117
SsiI CCGC 1 cut(s) 230
SspMI CTAG 1 cut(s) 417
SstI GAGCTC 2 cut(s) 39, 153
StyD4I CCNGG 3 cut(s) 167, 473, 552
StyI CCWWGG 2 cut(s) 799, 810
TaaI ACNGT 4 cut(s) 61, 322, 666, 880
TaiI ACGT 3 cut(s) 192, 225, 528
TaqI TCGA 4 cut(s) 105, 360, 521, 768
TasI AATT 1 cut(s) 117
TatI WGTACW 1 cut(s) 322
TfiI GAWTC 1 cut(s) 560
Tru1I TTAA 7 cut(s) 12, 81, 156, 486, 576, 692, 1109
Tru9I TTAA 7 cut(s) 12, 81, 156, 486, 576, 692, 1109
TscAI CASTG 6 cut(s) 247, 283, 313, 325, 438, 991
TseI GCWGC 3 cut(s) 227, 245, 1127
TspDTI ATGAA 4 cut(s) 17, 499, 581, 1160
TspRI CASTG 6 cut(s) 247, 283, 313, 325, 438, 991
Vha464I CTTAAG 2 cut(s) 485, 575
XceI RCATGY 1 cut(s) 841
XcmI CCANNNNNNNNNTGG 2 cut(s) 202, 817
XmiI GTMKAC 1 cut(s) 42
XmnI GAANNNNTTC 1 cut(s) 722
XspI CTAG 1 cut(s) 417
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.