Rmu_co8372547.1_g000001

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8372547.1
OG0000101
Physical Location & Seq
Reverse (-)
216 .. 1118
903 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8372547.1_g000001.1.cds

Sequence Viewer

Length: 903 bp
atgggtcatgctctgaaggcgtaccggcacatgttatcttacgggatcacccccagctcttgcacttacaatttactcatcgcaacactttctcttgatcccaatttccttgggcatgccaaggagttatttcttgaaatgttggataagggtatcaagcccttttccggaacctttatggctgtgttcaatggtattgctcgcctggagtcattggagaaggggaaggagttgcttgagcagatcaagcctaagggggtcttgcctgtgctggacgaaggccgtttcactgaggcaatgaaggctatgaagttgtatgatgatctcgagaagaagaccactgacaaagatgttcaagaagttatccgcaatatctaccttaatggcatggaggaagagtcaagggacatgttcattgctatggtagaagatggcaatgtagacgaggcaatgaggacatttcagtcaacaggtcagccgcgcatcaatcccatggtcatagtccacactgctgttattgaagcttacatcaatggtggcaagactgagggtgctctccagaccttcatggacatgctagcagctggacttgccccaatatcctacacttactctgttttgatcaagggactcgctgctgaccccaacttctttggggatgccaagaagtatctgattgagatgatggacaagggtatgcatccaaatgctgctacctacactgcagtgtttgagggctttgcaagggaggatgacaaggcaactgaggaggagggtaagaaatttctggaggtcatgatggccaagggttttgtacctgactctgtggctgtgaggatggtgttaacaggcagaccaacatctgtgattagcagggtcatgaacatcatccttttcgagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

300

Amino Acids

33.4

Weight (kDa)

5.24

Isoelectric Point (pI)

30.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 463
AccI GTMKAC 1 cut(s) 441
AccII CGCG 1 cut(s) 481
AccIII TCCGGA 1 cut(s) 167
AciI CCGC 2 cut(s) 367, 479
AclWI GGATC 2 cut(s) 53, 92
AcoI YGGCCR 1 cut(s) 801
AcsI RAATTY 1 cut(s) 782
AcuI CTGAAG 1 cut(s) 35
AfaI GTAC 2 cut(s) 23, 816
AfiI CCNNNNNNNGG 1 cut(s) 167
AflIII ACRYGT 2 cut(s) 30, 408
AgsI TTSAA 4 cut(s) 137, 190, 356, 521
AjnI CCWGG 1 cut(s) 204
AleI CACNNNNGTG 1 cut(s) 725
AluBI AGCT 3 cut(s) 57, 524, 584
AluI AGCT 3 cut(s) 57, 524, 584
Alw21I GWGCWC 1 cut(s) 556
AlwI GGATC 2 cut(s) 53, 92
Ama87I CYCGRG 1 cut(s) 326
Aor13HI TCCGGA 1 cut(s) 167
AoxI GGCC 2 cut(s) 280, 801
ApeKI GCWGC 3 cut(s) 581, 635, 710
ApoI RAATTY 1 cut(s) 782
AspLEI GCGC 1 cut(s) 483
AsuHPI GGTGA 1 cut(s) 40
AsuNHI GCTAGC 1 cut(s) 577
AvaI CYCGRG 1 cut(s) 326
AxyI CCTNAGG 1 cut(s) 252
BalI TGGCCA 1 cut(s) 803
BbsI GAAGAC 1 cut(s) 341
Bbv12I GWGCWC 1 cut(s) 556
BbvI GCAGC 3 cut(s) 593, 622, 697
BccI CCATC 4 cut(s) 425, 679, 793, 832
BceAI ACGGC 1 cut(s) 267
BciT130I CCWGG 1 cut(s) 206
BclI TGATCA 1 cut(s) 621
BfaI CTAG 1 cut(s) 578
BfmI CTRYAG 1 cut(s) 723
BisI GCNGC 4 cut(s) 479, 582, 636, 711
BlsI GCNGC 4 cut(s) 480, 583, 637, 712
Bme1390I CCNGG 1 cut(s) 206
BmeT110I CYCGRG 1 cut(s) 326
BmiI GGNNCC 1 cut(s) 172
BmrFI CCNGG 1 cut(s) 206
BmsI GCATC 3 cut(s) 492, 649, 709
BmtI GCTAGC 1 cut(s) 581
BpiI GAAGAC 1 cut(s) 341
BpmI CTGGAG 3 cut(s) 227, 542, 809
BpuEI CTTGAG 1 cut(s) 257
BsaJI CCNNGG 4 cut(s) 109, 120, 492, 804
BsaWI WCCGGW 1 cut(s) 167
BsaXI ACNNNNNCTCC 2 cut(s) 383, 413
Bsc4I CCNNNNNNNGG 1 cut(s) 167
Bse118I RCCGGY 1 cut(s) 24
Bse21I CCTNAGG 1 cut(s) 252
Bse3DI GCAATG 4 cut(s) 303, 414, 442, 456
BseAI TCCGGA 1 cut(s) 167
BseBI CCWGG 1 cut(s) 206
BseDI CCNNGG 4 cut(s) 109, 120, 492, 804
BseGI GGATG 5 cut(s) 664, 700, 757, 843, 888
BseLI CCNNNNNNNGG 1 cut(s) 167
BseMI GCAATG 4 cut(s) 303, 414, 442, 456
BseMII CTCAG 3 cut(s) 282, 537, 756
BseRI GAGGAG 2 cut(s) 782, 785
BseXI GCAGC 3 cut(s) 593, 622, 697
BseYI CCCAGC 1 cut(s) 53
Bsh1236I CGCG 1 cut(s) 481
BshFI GGCC 2 cut(s) 282, 803
BsiHKAI GWGCWC 1 cut(s) 556
BsiHKCI CYCGRG 1 cut(s) 326
BsiSI CCGG 2 cut(s) 25, 168
BslFI GGGAC 2 cut(s) 419, 642
BslI CCNNNNNNNGG 1 cut(s) 167
BsmFI GGGAC 2 cut(s) 419, 642
BsnI GGCC 2 cut(s) 282, 803
BsoBI CYCGRG 1 cut(s) 326
Bsp1286I GDGCHC 1 cut(s) 556
Bsp13I TCCGGA 1 cut(s) 167
Bsp143I GATC 5 cut(s) 45, 97, 243, 322, 621
Bsp19I CCATGG 1 cut(s) 492
BspACI CCGC 2 cut(s) 367, 479
BspANI GGCC 2 cut(s) 282, 803
BspCNI CTCAG 3 cut(s) 283, 538, 757
BspEI TCCGGA 1 cut(s) 167
BspFNI CGCG 1 cut(s) 481
BspHI TCATGA 2 cut(s) 795, 879
BspLI GGNNCC 1 cut(s) 172
BspMAI CTGCAG 1 cut(s) 727
BspOI GCTAGC 1 cut(s) 581
BspPI GGATC 2 cut(s) 53, 92
BsrDI GCAATG 4 cut(s) 303, 414, 442, 456
BsrFI RCCGGY 1 cut(s) 24
BssAI RCCGGY 1 cut(s) 24
BssECI CCNNGG 4 cut(s) 109, 120, 492, 804
BssMI GATC 5 cut(s) 45, 97, 243, 322, 621
BssT1I CCWWGG 4 cut(s) 109, 120, 492, 804
Bst2UI CCWGG 1 cut(s) 206
Bst6I CTCTTC 1 cut(s) 390
BstC8I GCNNGC 3 cut(s) 117, 202, 579
BstDEI CTNAG 4 cut(s) 252, 291, 546, 765
BstDSI CCRYGG 1 cut(s) 492
BstF5I GGATG 5 cut(s) 664, 700, 757, 843, 888
BstFNI CGCG 1 cut(s) 481
BstHHI GCGC 1 cut(s) 483
BstKTI GATC 5 cut(s) 48, 100, 246, 325, 624
BstMBI GATC 5 cut(s) 45, 97, 243, 322, 621
BstMWI GCNNNNNNNGC 4 cut(s) 17, 247, 302, 590
BstNI CCWGG 1 cut(s) 206
BstNSI RCATGY 4 cut(s) 34, 119, 412, 577
BstSCI CCNGG 1 cut(s) 204
BstSFI CTRYAG 1 cut(s) 723
BstUI CGCG 1 cut(s) 481
BstV1I GCAGC 3 cut(s) 593, 622, 697
BstV2I GAAGAC 1 cut(s) 341
Bsu36I CCTNAGG 1 cut(s) 252
BsuRI GGCC 2 cut(s) 282, 803
BtgI CCRYGG 1 cut(s) 492
BtgZI GCGATG 1 cut(s) 64
BtsCI GGATG 5 cut(s) 664, 700, 757, 843, 888
BtsI GCAGTG 3 cut(s) 507, 720, 732
BtsIMutI CAGTG 5 cut(s) 288, 339, 507, 720, 732
Cac8I GCNNGC 3 cut(s) 117, 202, 579
CciI TCATGA 2 cut(s) 795, 879
CfoI GCGC 1 cut(s) 483
Cfr10I RCCGGY 1 cut(s) 24
Csp6I GTAC 2 cut(s) 22, 815
CviQI GTAC 2 cut(s) 22, 815
DdeI CTNAG 4 cut(s) 252, 291, 546, 765
DpnI GATC 5 cut(s) 47, 99, 245, 324, 623
DpnII GATC 5 cut(s) 45, 97, 243, 322, 621
DrdI GACNNNNNNGTC 1 cut(s) 463
DseDI GACNNNNNNGTC 1 cut(s) 463
EaeI YGGCCR 1 cut(s) 801
Eam1104I CTCTTC 1 cut(s) 390
EarI CTCTTC 1 cut(s) 390
Eco130I CCWWGG 4 cut(s) 109, 120, 492, 804
Eco57I CTGAAG 1 cut(s) 35
Eco81I CCTNAGG 1 cut(s) 252
Eco88I CYCGRG 1 cut(s) 326
EcoRII CCWGG 1 cut(s) 204
EcoT14I CCWWGG 4 cut(s) 109, 120, 492, 804
EcoT22I ATGCAT 1 cut(s) 702
ErhI CCWWGG 4 cut(s) 109, 120, 492, 804
FalI AAGNNNNNCTT 2 cut(s) 245, 277
FaqI GGGAC 2 cut(s) 419, 642
FbaI TGATCA 1 cut(s) 621
FblI GTMKAC 1 cut(s) 441
Fnu4HI GCNGC 4 cut(s) 479, 582, 636, 711
FokI GGATG 5 cut(s) 671, 687, 764, 850, 875
Fsp4HI GCNGC 4 cut(s) 479, 582, 636, 711
FspBI CTAG 1 cut(s) 578
GlaI GCGC 1 cut(s) 482
GluI GCNGC 4 cut(s) 479, 582, 636, 711
GsaI CCCAGC 1 cut(s) 57
GsuI CTGGAG 3 cut(s) 227, 542, 809
HaeIII GGCC 2 cut(s) 282, 803
HapII CCGG 2 cut(s) 25, 168
HhaI GCGC 1 cut(s) 483
Hin6I GCGC 1 cut(s) 481
HinP1I GCGC 1 cut(s) 481
HincII GTYRAC 2 cut(s) 468, 846
HindII GTYRAC 2 cut(s) 468, 846
HindIII AAGCTT 1 cut(s) 522
HinfI GANTC 4 cut(s) 209, 398, 630, 821
HpaI GTTAAC 1 cut(s) 846
HpaII CCGG 2 cut(s) 25, 168
HphI GGTGA 1 cut(s) 40
Hpy166II GTNNAC 4 cut(s) 442, 468, 505, 846
Hpy188I TCNGA 2 cut(s) 15, 675
Hpy8I GTNNAC 4 cut(s) 442, 468, 505, 846
HpyAV CCTTC 6 cut(s) 10, 214, 220, 272, 295, 574
HpyCH4V TGCA 4 cut(s) 63, 700, 725, 743
HpyF10VI GCNNNNNNNGC 4 cut(s) 17, 247, 302, 590
HpyF3I CTNAG 4 cut(s) 252, 291, 546, 765
HspAI GCGC 1 cut(s) 481
Kpn2I TCCGGA 1 cut(s) 167
Ksp22I TGATCA 1 cut(s) 621
KspAI GTTAAC 1 cut(s) 846
Kzo9I GATC 5 cut(s) 45, 97, 243, 322, 621
Lsp1109I GCAGC 3 cut(s) 593, 622, 697
LweI GCATC 3 cut(s) 492, 649, 709
MaeI CTAG 1 cut(s) 578
MalI GATC 5 cut(s) 47, 99, 245, 324, 623
MboI GATC 5 cut(s) 45, 97, 243, 322, 621
MboII GAAGA 4 cut(s) 343, 346, 407, 440
MhlI GDGCHC 1 cut(s) 556
MlsI TGGCCA 1 cut(s) 803
MluCI AATT 3 cut(s) 70, 103, 782
MluNI TGGCCA 1 cut(s) 803
MlyI GAGTC 4 cut(s) 218, 407, 624, 815
MmeI TCCRAC 1 cut(s) 123
Mox20I TGGCCA 1 cut(s) 803
Mph1103I ATGCAT 1 cut(s) 702
MroI TCCGGA 1 cut(s) 167
MscI TGGCCA 1 cut(s) 803
MseI TTAA 2 cut(s) 381, 845
MslI CAYNNNNRTG 4 cut(s) 419, 572, 705, 725
Msp20I TGGCCA 1 cut(s) 803
MspA1I CMGCKG 1 cut(s) 584
MspI CCGG 2 cut(s) 25, 168
MspR9I CCNGG 1 cut(s) 206
MvaI CCWGG 1 cut(s) 206
MvnI CGCG 1 cut(s) 481
MwoI GCNNNNNNNGC 4 cut(s) 17, 247, 302, 590
NcoI CCATGG 1 cut(s) 492
NdeII GATC 5 cut(s) 45, 97, 243, 322, 621
NheI GCTAGC 1 cut(s) 577
NlaIV GGNNCC 1 cut(s) 172
NsiI ATGCAT 1 cut(s) 702
NspI RCATGY 4 cut(s) 34, 119, 412, 577
OliI CACNNNNGTG 1 cut(s) 725
PaeI GCATGC 1 cut(s) 119
PaeR7I CTCGAG 1 cut(s) 326
PagI TCATGA 2 cut(s) 795, 879
PciI ACATGT 2 cut(s) 30, 408
PkrI GCNGC 4 cut(s) 480, 583, 637, 712
PleI GAGTC 4 cut(s) 217, 406, 624, 815
PpsI GAGTC 4 cut(s) 217, 406, 624, 815
PscI ACATGT 2 cut(s) 30, 408
Psp6I CCWGG 1 cut(s) 204
PspFI CCCAGC 1 cut(s) 53
PspGI CCWGG 1 cut(s) 204
PspN4I GGNNCC 1 cut(s) 172
PstI CTGCAG 1 cut(s) 727
PvuII CAGCTG 1 cut(s) 584
RsaI GTAC 2 cut(s) 23, 816
RsaNI GTAC 2 cut(s) 22, 815
RseI CAYNNNNRTG 4 cut(s) 419, 572, 705, 725
SaqAI TTAA 2 cut(s) 381, 845
SatI GCNGC 4 cut(s) 479, 582, 636, 711
Sau3AI GATC 5 cut(s) 45, 97, 243, 322, 621
SchI GAGTC 4 cut(s) 218, 407, 624, 815
ScrFI CCNGG 1 cut(s) 206
SduI GDGCHC 1 cut(s) 556
SfaNI GCATC 3 cut(s) 492, 649, 709
SfcI CTRYAG 1 cut(s) 723
Sfr274I CTCGAG 1 cut(s) 326
SlaI CTCGAG 1 cut(s) 326
SmiMI CAYNNNNRTG 4 cut(s) 419, 572, 705, 725
SmlI CTYRAG 2 cut(s) 236, 326
SmoI CTYRAG 2 cut(s) 236, 326
SphI GCATGC 1 cut(s) 119
Sse9I AATT 3 cut(s) 70, 103, 782
SsiI CCGC 2 cut(s) 367, 479
SspMI CTAG 1 cut(s) 578
StyD4I CCNGG 1 cut(s) 204
StyI CCWWGG 4 cut(s) 109, 120, 492, 804
TaqI TCGA 2 cut(s) 327, 897
TasI AATT 3 cut(s) 70, 103, 782
TauI GCSGC 1 cut(s) 481
Tru1I TTAA 2 cut(s) 381, 845
Tru9I TTAA 2 cut(s) 381, 845
TscAI CASTG 5 cut(s) 295, 346, 514, 727, 732
TseI GCWGC 3 cut(s) 581, 635, 710
TspDTI ATGAA 5 cut(s) 314, 323, 403, 556, 896
TspRI CASTG 5 cut(s) 295, 346, 514, 727, 732
XapI RAATTY 1 cut(s) 782
XceI RCATGY 4 cut(s) 34, 119, 412, 577
XhoI CTCGAG 1 cut(s) 326
XmiI GTMKAC 1 cut(s) 441
XspI CTAG 1 cut(s) 578
Zsp2I ATGCAT 1 cut(s) 702
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.