RLG00000001110

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000101
Physical Location & Seq
Reverse (-)
10432609 .. 10433827
1219 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001110

Sequence Viewer

Length: 1140 bp
ATGGCTGACACACCTAATTCTAGTGATGAAGACCTCAAGAAACATTTGATGAAGGTTTATGAGGATGTGACCAAAGACTCTGAGGATAAGGAATTGAGAAAAATATTTGATTGGATTGTGCACTGCGATGCCCTTAATGCAAATGCTATTCATATGTTCAGTTCTCTGGCAGATTGCGGCTTCCGTGATGAAGCGAGAGAGCTCTTTAAGCCTCAGTCTGAGCAGACCACACTACCGGAAGTGGCTGTCTTCACCATGGTGATTATGGCTACTCCTCCAATGGCAAGATGCTCACAAGGTCTACCAGCAGATGATAGTCTCTGGTATGCCAAGAAGTATTTCCTTGAAATGTTGGATAGGGGGATAAAGCCCCAATATCAACCCTACATGTATGTTATGGATTCCATTGCCTACCGAGAGCCAGTGGAGGAGGCCAAGAAGTTCCTTGAGCAGATAAAAGCTAAGGGGTTCATCCCTGTCATCGATGATTTTCAATACAAAGAAGTCCACCTCACAGAAGCATTGCAGGCAATGAAAACGTATGCTGATCTCGTCGTTAACAACAACACTGACAAGGCTGTTCAAAAATTGTTCCGCAAGTCACGCCTCTCCCCTTGGATAGAACGGTCGATGGAGGTGCACAAGGCTTTGGTAGAGGATGGAAATGTGGACGAGGCCATCGAGCTCTATCATACCATTCAACAGACAGGTGTAGAGCCATTGGTCCAAATCCACACCTCTATTATTAAAGCCTACCTCAAGTTTGGCAAGACCAAGGGTGCTCTGGAGGCGTATCTGGCCATGTTAGCTGCTGGGGTTGCCCCTAACTTCTACACTTACACTGTTTTAATCAAGGGACTCTGTGCTAACTGCAACTTCTTTGGAGATGTCAAGAAGTGCTTGCTTGAGATGATGGACGAGGGGAAGCAGCCTAATGTTGCTTCCTATACTACAGTGATAGAAGGCTTTGTGCTTTGGGAGGACAAGACAGCTGAGGAGAAGGCCAAAGAGTTTGTGGAGATGATGATGGGTAAAGGTTTTGTGCCTAATGCGAAGGCTATGATGAAGGTCTTGAAGGGCAAACCAACACCGGTAATTGGAAGGGTCATGAACATTGTACTGTCCAAGTTGGAGAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

380

Amino Acids

43.04

Weight (kDa)

5.67

Isoelectric Point (pI)

34.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 246 - 288 9.6e-11 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 301
AciI CCGC 2 cut(s) 177, 595
AcoI YGGCCR 1 cut(s) 798
AfaI GTAC 1 cut(s) 1119
AfiI CCNNNNNNNGG 1 cut(s) 1097
AflIII ACRYGT 1 cut(s) 387
AgeI ACCGGT 1 cut(s) 1090
AgsI TTSAA 5 cut(s) 347, 494, 584, 701, 1075
AjuI GAANNNNNNNTTGG 2 cut(s) 323, 355
AleI CACNNNNGTG 1 cut(s) 257
AluBI AGCT 6 cut(s) 202, 461, 685, 809, 992, 1137
AluI AGCT 6 cut(s) 202, 461, 685, 809, 992, 1137
Alw21I GWGCWC 5 cut(s) 123, 204, 642, 687, 784
Alw26I GTCTC 1 cut(s) 323
Alw44I GTGCAC 2 cut(s) 119, 638
AoxI GGCC 4 cut(s) 432, 675, 798, 1002
ApaLI GTGCAC 2 cut(s) 119, 638
ApeKI GCWGC 2 cut(s) 809, 928
AsiGI ACCGGT 1 cut(s) 1090
Asp700I GAANNNNTTC 1 cut(s) 338
AspS9I GGNCC 1 cut(s) 724
AsuHPI GGTGA 2 cut(s) 244, 271
AvaII GGWCC 1 cut(s) 724
BaeGI GKGCMC 2 cut(s) 123, 642
BalI TGGCCA 1 cut(s) 800
BanII GRGCYC 2 cut(s) 204, 687
BbsI GAAGAC 2 cut(s) 36, 241
Bbv12I GWGCWC 5 cut(s) 123, 204, 642, 687, 784
BbvCI CCTCAGC 1 cut(s) 993
BbvI GCAGC 2 cut(s) 796, 940
BccI CCATC 5 cut(s) 625, 653, 686, 907, 1021
BcgI CGANNNNNNTGC 2 cut(s) 619, 653
BcoDI GTCTC 1 cut(s) 323
BfaI CTAG 1 cut(s) 21
BfmI CTRYAG 1 cut(s) 951
BisI GCNGC 3 cut(s) 178, 810, 929
BlsI GCNGC 3 cut(s) 179, 811, 930
Bme18I GGWCC 1 cut(s) 724
BmgT120I GGNCC 1 cut(s) 724
BmsI GCATC 2 cut(s) 118, 278
BpiI GAAGAC 2 cut(s) 36, 241
BpmI CTGGAG 1 cut(s) 806
Bpu10I CCTNAGC 2 cut(s) 462, 993
BpuEI CTTGAG 4 cut(s) 20, 467, 743, 926
Bsa29I ATCGAT 1 cut(s) 483
BsaJI CCNNGG 3 cut(s) 255, 614, 774
BsaWI WCCGGW 2 cut(s) 235, 1090
Bsc4I CCNNNNNNNGG 1 cut(s) 1097
Bse118I RCCGGY 1 cut(s) 1090
Bse1I ACTGG 1 cut(s) 422
Bse3DI GCAATG 3 cut(s) 405, 521, 537
BseCI ATCGAT 1 cut(s) 483
BseDI CCNNGG 3 cut(s) 255, 614, 774
BseGI GGATG 3 cut(s) 70, 471, 664
BseLI CCNNNNNNNGG 1 cut(s) 1097
BseMI GCAATG 3 cut(s) 405, 521, 537
BseMII CTCAG 4 cut(s) 72, 210, 227, 984
BseNI ACTGG 1 cut(s) 422
BseRI GAGGAG 3 cut(s) 264, 443, 1010
BseSI GKGCMC 2 cut(s) 123, 642
BseXI GCAGC 2 cut(s) 796, 940
BseYI CCCAGC 1 cut(s) 812
Bsh1285I CGRYCG 1 cut(s) 629
BshFI GGCC 4 cut(s) 434, 677, 800, 1004
BshTI ACCGGT 1 cut(s) 1090
BshVI ATCGAT 1 cut(s) 483
BsiEI CGRYCG 1 cut(s) 629
BsiHKAI GWGCWC 5 cut(s) 123, 204, 642, 687, 784
BsiSI CCGG 2 cut(s) 236, 1091
BslFI GGGAC 1 cut(s) 870
BslI CCNNNNNNNGG 1 cut(s) 1097
BsmAI GTCTC 1 cut(s) 323
BsmFI GGGAC 1 cut(s) 870
BsnI GGCC 4 cut(s) 434, 677, 800, 1004
Bsp1286I GDGCHC 5 cut(s) 123, 204, 642, 687, 784
Bsp143I GATC 1 cut(s) 547
Bsp19I CCATGG 1 cut(s) 255
BspACI CCGC 2 cut(s) 177, 595
BspANI GGCC 4 cut(s) 434, 677, 800, 1004
BspCNI CTCAG 4 cut(s) 73, 211, 226, 985
BspDI ATCGAT 1 cut(s) 483
BspHI TCATGA 1 cut(s) 1107
BsrDI GCAATG 3 cut(s) 405, 521, 537
BsrFI RCCGGY 1 cut(s) 1090
BsrI ACTGG 1 cut(s) 422
BssAI RCCGGY 1 cut(s) 1090
BssECI CCNNGG 3 cut(s) 255, 614, 774
BssMI GATC 1 cut(s) 547
BssT1I CCWWGG 3 cut(s) 255, 614, 774
Bst4CI ACNGT 4 cut(s) 627, 844, 955, 1122
BstC8I GCNNGC 2 cut(s) 528, 902
BstDEI CTNAG 5 cut(s) 81, 213, 219, 462, 993
BstDSI CCRYGG 1 cut(s) 255
BstF5I GGATG 3 cut(s) 70, 471, 664
BstKTI GATC 1 cut(s) 550
BstMAI GTCTC 1 cut(s) 323
BstMBI GATC 1 cut(s) 547
BstMCI CGRYCG 1 cut(s) 629
BstMWI GCNNNNNNNGC 8 cut(s) 137, 208, 527, 603, 788, 797, 806, 818
BstNSI RCATGY 1 cut(s) 391
BstSFI CTRYAG 1 cut(s) 951
BstSLI GKGCMC 2 cut(s) 123, 642
BstV1I GCAGC 2 cut(s) 796, 940
BstV2I GAAGAC 2 cut(s) 36, 241
Bsu15I ATCGAT 1 cut(s) 483
BsuRI GGCC 4 cut(s) 434, 677, 800, 1004
BsuTUI ATCGAT 1 cut(s) 483
BtgI CCRYGG 1 cut(s) 255
BtgZI GCGATG 1 cut(s) 141
BtsCI GGATG 3 cut(s) 70, 471, 664
BtsI GCAGTG 1 cut(s) 121
BtsIMutI CAGTG 5 cut(s) 121, 429, 567, 840, 960
Cac8I GCNNGC 2 cut(s) 528, 902
CciI TCATGA 1 cut(s) 1107
Cfr10I RCCGGY 1 cut(s) 1090
Cfr13I GGNCC 1 cut(s) 724
ClaI ATCGAT 1 cut(s) 483
Csp6I GTAC 1 cut(s) 1118
CspAI ACCGGT 1 cut(s) 1090
CviAII CATG 4 cut(s) 256, 388, 802, 1108
CviQI GTAC 1 cut(s) 1118
DdeI CTNAG 5 cut(s) 81, 213, 219, 462, 993
DpnI GATC 1 cut(s) 549
DpnII GATC 1 cut(s) 547
EaeI YGGCCR 1 cut(s) 798
Ecl136II GAGCTC 2 cut(s) 202, 685
Eco130I CCWWGG 3 cut(s) 255, 614, 774
Eco24I GRGCYC 2 cut(s) 204, 687
Eco47I GGWCC 1 cut(s) 724
Eco53kI GAGCTC 2 cut(s) 202, 685
EcoICRI GAGCTC 2 cut(s) 202, 685
EcoT14I CCWWGG 3 cut(s) 255, 614, 774
EcoT38I GRGCYC 2 cut(s) 204, 687
ErhI CCWWGG 3 cut(s) 255, 614, 774
FaeI CATG 4 cut(s) 259, 391, 805, 1111
FalI AAGNNNNNCTT 2 cut(s) 884, 916
FaqI GGGAC 1 cut(s) 870
FatI CATG 4 cut(s) 255, 387, 801, 1107
FauNDI CATATG 1 cut(s) 153
FblI GTMKAC 1 cut(s) 301
Fnu4HI GCNGC 3 cut(s) 178, 810, 929
FokI GGATG 3 cut(s) 77, 458, 671
FriOI GRGCYC 2 cut(s) 204, 687
Fsp4HI GCNGC 3 cut(s) 178, 810, 929
FspBI CTAG 1 cut(s) 21
GluI GCNGC 3 cut(s) 178, 810, 929
GsaI CCCAGC 1 cut(s) 816
GsuI CTGGAG 1 cut(s) 806
HaeIII GGCC 4 cut(s) 434, 677, 800, 1004
HapII CCGG 2 cut(s) 236, 1091
Hin1II CATG 4 cut(s) 259, 391, 805, 1111
HincII GTYRAC 1 cut(s) 559
HindII GTYRAC 1 cut(s) 559
HinfI GANTC 3 cut(s) 77, 401, 858
HpaI GTTAAC 1 cut(s) 559
HpaII CCGG 2 cut(s) 236, 1091
HphI GGTGA 2 cut(s) 244, 271
Hpy166II GTNNAC 6 cut(s) 121, 302, 508, 559, 640, 670
Hpy188I TCNGA 2 cut(s) 82, 220
Hpy188III TCNNGA 5 cut(s) 37, 785, 892, 1072, 1108
Hpy8I GTNNAC 6 cut(s) 121, 302, 508, 559, 640, 670
Hpy99I CGWCG 1 cut(s) 557
HpyAV CCTTC 7 cut(s) 46, 956, 994, 1048, 1060, 1069, 1095
HpyCH4III ACNGT 4 cut(s) 627, 844, 955, 1122
HpyCH4IV ACGT 1 cut(s) 539
HpyCH4V TGCA 5 cut(s) 121, 140, 526, 640, 873
HpyF10VI GCNNNNNNNGC 8 cut(s) 137, 208, 527, 603, 788, 797, 806, 818
HpyF3I CTNAG 5 cut(s) 81, 213, 219, 462, 993
HpySE526I ACGT 1 cut(s) 539
Hsp92II CATG 4 cut(s) 259, 391, 805, 1111
KspAI GTTAAC 1 cut(s) 559
Kzo9I GATC 1 cut(s) 547
Lsp1109I GCAGC 2 cut(s) 796, 940
LweI GCATC 2 cut(s) 118, 278
MaeI CTAG 1 cut(s) 21
MaeII ACGT 1 cut(s) 539
MaeIII GTNAC 2 cut(s) 67, 600
MalI GATC 1 cut(s) 549
MboI GATC 1 cut(s) 547
MboII GAAGA 2 cut(s) 41, 241
MhlI GDGCHC 5 cut(s) 123, 204, 642, 687, 784
MlsI TGGCCA 1 cut(s) 800
MluCI AATT 4 cut(s) 16, 92, 587, 1095
MluNI TGGCCA 1 cut(s) 800
MlyI GAGTC 2 cut(s) 71, 852
MmeI TCCRAC 2 cut(s) 333, 1110
Mox20I TGGCCA 1 cut(s) 800
MroXI GAANNNNTTC 1 cut(s) 338
MscI TGGCCA 1 cut(s) 800
MseI TTAA 5 cut(s) 135, 207, 558, 747, 848
MslI CAYNNNNRTG 2 cut(s) 126, 257
Msp20I TGGCCA 1 cut(s) 800
MspA1I CMGCKG 1 cut(s) 992
MspI CCGG 2 cut(s) 236, 1091
MwoI GCNNNNNNNGC 8 cut(s) 137, 208, 527, 603, 788, 797, 806, 818
NcoI CCATGG 1 cut(s) 255
NdeI CATATG 1 cut(s) 153
NdeII GATC 1 cut(s) 547
NlaIII CATG 4 cut(s) 259, 391, 805, 1111
NmuCI GTSAC 2 cut(s) 67, 600
NspI RCATGY 1 cut(s) 391
OliI CACNNNNGTG 1 cut(s) 257
PagI TCATGA 1 cut(s) 1107
PciI ACATGT 1 cut(s) 387
PcsI WCGNNNNNNNCGW 1 cut(s) 678
PdmI GAANNNNTTC 1 cut(s) 338
PfeI GAWTC 1 cut(s) 401
PinAI ACCGGT 1 cut(s) 1090
PkrI GCNGC 3 cut(s) 179, 811, 930
PleI GAGTC 2 cut(s) 71, 852
PpsI GAGTC 2 cut(s) 71, 852
PscI ACATGT 1 cut(s) 387
Psp124BI GAGCTC 2 cut(s) 204, 687
PspFI CCCAGC 1 cut(s) 812
PspPI GGNCC 1 cut(s) 724
PvuII CAGCTG 1 cut(s) 992
RsaI GTAC 1 cut(s) 1119
RsaNI GTAC 1 cut(s) 1118
RseI CAYNNNNRTG 2 cut(s) 126, 257
SacI GAGCTC 2 cut(s) 204, 687
SaqAI TTAA 5 cut(s) 135, 207, 558, 747, 848
SatI GCNGC 3 cut(s) 178, 810, 929
Sau3AI GATC 1 cut(s) 547
Sau96I GGNCC 1 cut(s) 724
SchI GAGTC 2 cut(s) 71, 852
SduI GDGCHC 5 cut(s) 123, 204, 642, 687, 784
SfaNI GCATC 2 cut(s) 118, 278
SfcI CTRYAG 1 cut(s) 951
SinI GGWCC 1 cut(s) 724
SmiMI CAYNNNNRTG 2 cut(s) 126, 257
SmlI CTYRAG 4 cut(s) 35, 446, 758, 905
SmoI CTYRAG 4 cut(s) 35, 446, 758, 905
Sse9I AATT 4 cut(s) 16, 92, 587, 1095
SsiI CCGC 2 cut(s) 177, 595
SspI AATATT 1 cut(s) 105
SspMI CTAG 1 cut(s) 21
SstI GAGCTC 2 cut(s) 204, 687
StyI CCWWGG 3 cut(s) 255, 614, 774
TaaI ACNGT 4 cut(s) 627, 844, 955, 1122
TaiI ACGT 1 cut(s) 542
TaqI TCGA 3 cut(s) 483, 629, 681
TasI AATT 4 cut(s) 16, 92, 587, 1095
TatI WGTACW 1 cut(s) 1117
TauI GCSGC 1 cut(s) 180
TfiI GAWTC 1 cut(s) 401
Tru1I TTAA 5 cut(s) 135, 207, 558, 747, 848
Tru9I TTAA 5 cut(s) 135, 207, 558, 747, 848
TscAI CASTG 5 cut(s) 128, 429, 574, 847, 960
TseFI GTSAC 2 cut(s) 67, 600
TseI GCWGC 2 cut(s) 809, 928
Tsp45I GTSAC 2 cut(s) 67, 600
TspDTI ATGAA 8 cut(s) 42, 65, 140, 204, 460, 548, 1079, 1124
TspGWI ACGGA 1 cut(s) 173
TspRI CASTG 5 cut(s) 128, 429, 574, 847, 960
VneI GTGCAC 2 cut(s) 119, 638
VpaK11BI GGWCC 1 cut(s) 724
XceI RCATGY 1 cut(s) 391
XcmI CCANNNNNNNNNTGG 3 cut(s) 262, 781, 1012
XmiI GTMKAC 1 cut(s) 301
XmnI GAANNNNTTC 1 cut(s) 338
XspI CTAG 1 cut(s) 21
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.