RLG00000001942

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000101
Physical Location & Seq
Forward (+)
23270073 .. 23271311
1239 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001942

Sequence Viewer

Length: 1092 bp
ATGGAGGACAGTACTAGTTCCCCCAATTCTTCCGCCGATGACCTCAAGAAACGTGTCATGAAGGTTTTCAAGGATGCGACCAAAGACTCCAAAGAGCTCTTTAAGCCTCGCTCTGAGTTTGCCGTGCTGCCTGACGTGGCTATCTTCACCATTGTCATTCGGGACTATGCCAATGCCGGCAAGACCAACGCTGCTCACAAGGTCTACCAGCAAATGATAGCTGCCGGTGTCACCCCCACTTCCTGCACTTACACTGTACTCATCACCGTACTTGCAACAGACTCGTCTTCTGATGTCAATTTTGTTGGGTATGCCAAGAAGTACTTTTTGGAAATGTTGGATAAGGGGATGAAGCCCCATTCTGCCTCCTGCATGACTGTGTTTGACGCCATTGCCTGCCAGGAGTCAGTGGATAAGGTCAGGGAGTTCCTTGAGCAGATACAAGCAAAGGGGTTCGTCCCTGAGTCCAAAATTTTTCAGTTTGGAGAAACCCACCTTGCAGAAGCAATGAAAAAAATGAAGATGTATGATGGTCTCGTCACCAATACCACTGACAAGGATGTGCAAAAAGTATTCCGCACATGGAACACCAAGCCAGGTTGCCTCTGCAAAAAGTCGTTGAAGATGTACAAGGCTTTGATTGAGGATGGCAATGCAGAACAGGCCTTGGATCTTTATAAGTGCGTTGTTGAGGTGGGTATGCAGCCCATGGTTGTAGTCCACACCTCCGGTGCTCTGGAGGTGTACTACGGCATGTTAGCTGCTGGGGTTGCCCCAAACTCCTACACTTACACTGTTTTAATCAAGGGACTCACTGCTGACCCCAACTACTTTGGAGATGCCAAGAAGTGCTTGCTTGAGATGATGGACAAGGGGATGAGGCCTAATGCTGCCACCTACACTGCTGTGATAGAGAGCTTTGCAAAGCAAGAGGATGAGGCATCTGAGGAGGAGTGCAAACAGTTGGTGGAGGTGATGATGGGTAAGGGGTTTGTGCCAAATGCAAAGGCTATGATGGATGTTCTAAAGGGAAGACCAAAAGCCGTGATAAGAGGGGTCATGAACATTGTCGTTTCCAAGTTGAAGGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

364

Amino Acids

40.08

Weight (kDa)

8.24

Isoelectric Point (pI)

32.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 44 - 92 2.6e-11 PPR repeat family
PPR_3 PF13812 44 - 91 8.4e-07 Pentatricopeptide repeat domain
PPR_long PF17177 243 - 335 7.6e-06 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 244 - 271 1e-05 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 678
AccI GTMKAC 1 cut(s) 204
AciI CCGC 2 cut(s) 33, 577
AclWI GGATC 1 cut(s) 678
AcsI RAATTY 1 cut(s) 471
AcyI GRCGYC 1 cut(s) 387
AfaI GTAC 6 cut(s) 13, 258, 270, 323, 629, 746
AflIII ACRYGT 1 cut(s) 52
AgsI TTSAA 3 cut(s) 70, 622, 1084
AhlI ACTAGT 1 cut(s) 14
AjiI CACGTC 1 cut(s) 136
AjnI CCWGG 2 cut(s) 399, 595
AjuI GAANNNNNNNTTGG 2 cut(s) 311, 343
AleI CACNNNNGTG 1 cut(s) 905
AluBI AGCT 4 cut(s) 97, 221, 761, 918
AluI AGCT 4 cut(s) 97, 221, 761, 918
Alw21I GWGCWC 2 cut(s) 99, 736
Alw26I GTCTC 1 cut(s) 539
AlwI GGATC 1 cut(s) 678
AoxI GGCC 2 cut(s) 663, 881
ApeKI GCWGC 6 cut(s) 127, 191, 221, 703, 761, 890
ApoI RAATTY 1 cut(s) 471
Asp700I GAANNNNTTC 1 cut(s) 65
AsuHPI GGTGA 5 cut(s) 139, 223, 256, 532, 985
BanII GRGCYC 1 cut(s) 99
BbsI GAAGAC 2 cut(s) 279, 1039
Bbv12I GWGCWC 2 cut(s) 99, 736
BbvI GCAGC 6 cut(s) 114, 178, 208, 715, 748, 877
BccI CCATC 5 cut(s) 524, 641, 859, 973, 1009
BceAI ACGGC 3 cut(s) 107, 766, 1028
BcgI CGANNNNNNTGC 2 cut(s) 264, 298
BciT130I CCWGG 2 cut(s) 401, 597
BcoDI GTCTC 1 cut(s) 539
BcuI ACTAGT 1 cut(s) 14
BfaI CTAG 1 cut(s) 15
BisI GCNGC 6 cut(s) 128, 192, 222, 704, 762, 891
BlsI GCNGC 6 cut(s) 129, 193, 223, 705, 763, 892
BmcAI AGTACT 2 cut(s) 13, 323
Bme1390I CCNGG 2 cut(s) 401, 597
BmgBI CACGTC 1 cut(s) 136
BmrFI CCNGG 2 cut(s) 401, 597
BmsI GCATC 3 cut(s) 64, 829, 950
BpiI GAAGAC 2 cut(s) 279, 1039
BpmI CTGGAG 1 cut(s) 758
BpuEI CTTGAG 3 cut(s) 29, 452, 878
BsaHI GRCGYC 1 cut(s) 387
BsaI GGTCTC 1 cut(s) 539
BsaJI CCNNGG 2 cut(s) 666, 708
BsaWI WCCGGW 1 cut(s) 728
Bse118I RCCGGY 2 cut(s) 176, 224
Bse3DI GCAATG 3 cut(s) 390, 513, 658
BseBI CCWGG 2 cut(s) 401, 597
BseDI CCNNGG 2 cut(s) 666, 708
BseGI GGATG 7 cut(s) 79, 354, 565, 652, 882, 940, 1024
BseMI GCAATG 3 cut(s) 390, 513, 658
BseMII CTCAG 3 cut(s) 105, 453, 936
BseRI GAGGAG 2 cut(s) 962, 965
BseXI GCAGC 6 cut(s) 114, 178, 208, 715, 748, 877
BseYI CCCAGC 1 cut(s) 764
BsgI GTGCAG 1 cut(s) 229
BshFI GGCC 2 cut(s) 665, 883
BsiHKAI GWGCWC 2 cut(s) 99, 736
BsiSI CCGG 3 cut(s) 177, 225, 729
BslFI GGGAC 3 cut(s) 176, 443, 822
BsmAI GTCTC 1 cut(s) 539
BsmFI GGGAC 3 cut(s) 176, 443, 822
BsnI GGCC 2 cut(s) 665, 883
Bso31I GGTCTC 1 cut(s) 539
Bsp1286I GDGCHC 2 cut(s) 99, 736
Bsp1407I TGTACA 1 cut(s) 627
Bsp143I GATC 1 cut(s) 670
Bsp19I CCATGG 1 cut(s) 708
BspACI CCGC 2 cut(s) 33, 577
BspANI GGCC 2 cut(s) 665, 883
BspCNI CTCAG 3 cut(s) 106, 454, 937
BspHI TCATGA 2 cut(s) 57, 1059
BspPI GGATC 1 cut(s) 678
BspTNI GGTCTC 1 cut(s) 539
BsrDI GCAATG 3 cut(s) 390, 513, 658
BsrFI RCCGGY 2 cut(s) 176, 224
BsrGI TGTACA 1 cut(s) 627
BssAI RCCGGY 2 cut(s) 176, 224
BssECI CCNNGG 2 cut(s) 666, 708
BssMI GATC 1 cut(s) 670
BssNI GRCGYC 1 cut(s) 387
BssT1I CCWWGG 2 cut(s) 666, 708
Bst2UI CCWGG 2 cut(s) 401, 597
Bst4CI ACNGT 6 cut(s) 11, 256, 268, 379, 796, 963
BstACI GRCGYC 1 cut(s) 387
BstAUI TGTACA 1 cut(s) 627
BstC8I GCNNGC 3 cut(s) 178, 397, 854
BstDEI CTNAG 3 cut(s) 114, 462, 945
BstDSI CCRYGG 1 cut(s) 708
BstF5I GGATG 7 cut(s) 79, 354, 565, 652, 882, 940, 1024
BstKTI GATC 1 cut(s) 673
BstMAI GTCTC 1 cut(s) 539
BstMBI GATC 1 cut(s) 670
BstMWI GCNNNNNNNGC 3 cut(s) 103, 662, 770
BstNI CCWGG 2 cut(s) 401, 597
BstNSI RCATGY 1 cut(s) 757
BstSCI CCNGG 2 cut(s) 399, 595
BstV1I GCAGC 6 cut(s) 114, 178, 208, 715, 748, 877
BstV2I GAAGAC 2 cut(s) 279, 1039
BstX2I RGATCY 1 cut(s) 670
BstYI RGATCY 1 cut(s) 670
BsuRI GGCC 2 cut(s) 665, 883
BtgI CCRYGG 1 cut(s) 708
BtrI CACGTC 1 cut(s) 136
BtsCI GGATG 7 cut(s) 79, 354, 565, 652, 882, 940, 1024
BtsI GCAGTG 2 cut(s) 813, 900
BtsIMutI CAGTG 6 cut(s) 252, 414, 549, 792, 813, 900
Cac8I GCNNGC 3 cut(s) 178, 397, 854
CciI TCATGA 2 cut(s) 57, 1059
Cfr10I RCCGGY 2 cut(s) 176, 224
CseI GACGC 1 cut(s) 395
Csp6I GTAC 6 cut(s) 12, 257, 269, 322, 628, 745
CviAII CATG 6 cut(s) 58, 373, 582, 709, 754, 1060
CviQI GTAC 6 cut(s) 12, 257, 269, 322, 628, 745
DdeI CTNAG 3 cut(s) 114, 462, 945
DpnI GATC 1 cut(s) 672
DpnII GATC 1 cut(s) 670
EciI GGCGGA 1 cut(s) 22
Ecl136II GAGCTC 1 cut(s) 97
Eco130I CCWWGG 2 cut(s) 666, 708
Eco147I AGGCCT 2 cut(s) 665, 883
Eco24I GRGCYC 1 cut(s) 99
Eco31I GGTCTC 1 cut(s) 539
Eco53kI GAGCTC 1 cut(s) 97
EcoICRI GAGCTC 1 cut(s) 97
EcoRII CCWGG 2 cut(s) 399, 595
EcoT14I CCWWGG 2 cut(s) 666, 708
EcoT38I GRGCYC 1 cut(s) 99
ErhI CCWWGG 2 cut(s) 666, 708
FaeI CATG 6 cut(s) 61, 376, 585, 712, 757, 1063
FalI AAGNNNNNCTT 4 cut(s) 308, 340, 836, 868
FaqI GGGAC 3 cut(s) 176, 443, 822
FatI CATG 6 cut(s) 57, 372, 581, 708, 753, 1059
FblI GTMKAC 1 cut(s) 204
Fnu4HI GCNGC 6 cut(s) 128, 192, 222, 704, 762, 891
FokI GGATG 7 cut(s) 86, 361, 572, 659, 889, 947, 1031
FriOI GRGCYC 1 cut(s) 99
Fsp4HI GCNGC 6 cut(s) 128, 192, 222, 704, 762, 891
FspBI CTAG 1 cut(s) 15
GluI GCNGC 6 cut(s) 128, 192, 222, 704, 762, 891
GsaI CCCAGC 1 cut(s) 768
GsuI CTGGAG 1 cut(s) 758
HaeIII GGCC 2 cut(s) 665, 883
HapII CCGG 3 cut(s) 177, 225, 729
HgaI GACGC 1 cut(s) 395
Hin1I GRCGYC 1 cut(s) 387
Hin1II CATG 6 cut(s) 61, 376, 585, 712, 757, 1063
HinfI GANTC 5 cut(s) 86, 281, 404, 464, 810
HpaII CCGG 3 cut(s) 177, 225, 729
HphI GGTGA 5 cut(s) 139, 223, 256, 532, 985
Hpy166II GTNNAC 3 cut(s) 205, 721, 745
Hpy188I TCNGA 3 cut(s) 115, 292, 946
Hpy188III TCNNGA 5 cut(s) 46, 58, 161, 737, 1060
Hpy8I GTNNAC 3 cut(s) 205, 721, 745
HpyAV CCTTC 2 cut(s) 55, 1078
HpyCH4III ACNGT 6 cut(s) 11, 256, 268, 379, 796, 963
HpyCH4IV ACGT 2 cut(s) 52, 135
HpyF10VI GCNNNNNNNGC 3 cut(s) 103, 662, 770
HpyF3I CTNAG 3 cut(s) 114, 462, 945
HpySE526I ACGT 2 cut(s) 52, 135
Hsp92I GRCGYC 1 cut(s) 387
Hsp92II CATG 6 cut(s) 61, 376, 585, 712, 757, 1063
KroI GCCGGC 1 cut(s) 176
KroNI GCCGGC 1 cut(s) 178
Kzo9I GATC 1 cut(s) 670
Lsp1109I GCAGC 6 cut(s) 114, 178, 208, 715, 748, 877
LweI GCATC 3 cut(s) 64, 829, 950
MaeI CTAG 1 cut(s) 15
MaeII ACGT 2 cut(s) 52, 135
MaeIII GTNAC 2 cut(s) 229, 538
MalI GATC 1 cut(s) 672
MboI GATC 1 cut(s) 670
MboII GAAGA 6 cut(s) 21, 136, 279, 532, 634, 1044
MflI RGATCY 1 cut(s) 670
MhlI GDGCHC 2 cut(s) 99, 736
MluCI AATT 3 cut(s) 25, 298, 471
MlyI GAGTC 5 cut(s) 80, 275, 413, 473, 804
MmeI TCCRAC 1 cut(s) 318
MroNI GCCGGC 1 cut(s) 176
MroXI GAANNNNTTC 1 cut(s) 65
MseI TTAA 2 cut(s) 102, 800
MslI CAYNNNNRTG 2 cut(s) 377, 905
MspI CCGG 3 cut(s) 177, 225, 729
MspR9I CCNGG 2 cut(s) 401, 597
MvaI CCWGG 2 cut(s) 401, 597
MwoI GCNNNNNNNGC 3 cut(s) 103, 662, 770
NaeI GCCGGC 1 cut(s) 178
NcoI CCATGG 1 cut(s) 708
NdeII GATC 1 cut(s) 670
NgoMIV GCCGGC 1 cut(s) 176
NlaIII CATG 6 cut(s) 61, 376, 585, 712, 757, 1063
NmuCI GTSAC 2 cut(s) 229, 538
NspI RCATGY 1 cut(s) 757
OliI CACNNNNGTG 1 cut(s) 905
PagI TCATGA 2 cut(s) 57, 1059
PceI AGGCCT 2 cut(s) 665, 883
PdiI GCCGGC 1 cut(s) 178
PdmI GAANNNNTTC 1 cut(s) 65
PkrI GCNGC 6 cut(s) 129, 193, 223, 705, 763, 892
PleI GAGTC 5 cut(s) 80, 275, 412, 472, 804
PpsI GAGTC 5 cut(s) 80, 275, 412, 472, 804
PsiI TTATAA 1 cut(s) 678
Psp124BI GAGCTC 1 cut(s) 99
Psp6I CCWGG 2 cut(s) 399, 595
PspFI CCCAGC 1 cut(s) 764
PspGI CCWGG 2 cut(s) 399, 595
PsuI RGATCY 1 cut(s) 670
RsaI GTAC 6 cut(s) 13, 258, 270, 323, 629, 746
RsaNI GTAC 6 cut(s) 12, 257, 269, 322, 628, 745
RseI CAYNNNNRTG 2 cut(s) 377, 905
SacI GAGCTC 1 cut(s) 99
SaqAI TTAA 2 cut(s) 102, 800
SatI GCNGC 6 cut(s) 128, 192, 222, 704, 762, 891
Sau3AI GATC 1 cut(s) 670
ScaI AGTACT 2 cut(s) 13, 323
SchI GAGTC 5 cut(s) 80, 275, 413, 473, 804
ScrFI CCNGG 2 cut(s) 401, 597
SduI GDGCHC 2 cut(s) 99, 736
SfaNI GCATC 3 cut(s) 64, 829, 950
SmiMI CAYNNNNRTG 2 cut(s) 377, 905
SmlI CTYRAG 3 cut(s) 44, 431, 857
SmoI CTYRAG 3 cut(s) 44, 431, 857
SpeI ACTAGT 1 cut(s) 14
Sse9I AATT 3 cut(s) 25, 298, 471
SseBI AGGCCT 2 cut(s) 665, 883
SsiI CCGC 2 cut(s) 33, 577
SspMI CTAG 1 cut(s) 15
SstI GAGCTC 1 cut(s) 99
StuI AGGCCT 2 cut(s) 665, 883
StyD4I CCNGG 2 cut(s) 399, 595
StyI CCWWGG 2 cut(s) 666, 708
TaaI ACNGT 6 cut(s) 11, 256, 268, 379, 796, 963
TaiI ACGT 2 cut(s) 55, 138
TasI AATT 3 cut(s) 25, 298, 471
TatI WGTACW 5 cut(s) 11, 256, 321, 627, 744
Tru1I TTAA 2 cut(s) 102, 800
Tru9I TTAA 2 cut(s) 102, 800
TscAI CASTG 6 cut(s) 259, 414, 556, 799, 820, 907
TseFI GTSAC 2 cut(s) 229, 538
TseI GCWGC 6 cut(s) 127, 191, 221, 703, 761, 890
Tsp45I GTSAC 2 cut(s) 229, 538
TspDTI ATGAA 5 cut(s) 74, 365, 524, 533, 1076
TspRI CASTG 6 cut(s) 259, 414, 556, 799, 820, 907
XapI RAATTY 1 cut(s) 471
XceI RCATGY 1 cut(s) 757
XmiI GTMKAC 1 cut(s) 204
XmnI GAANNNNTTC 1 cut(s) 65
XspI CTAG 1 cut(s) 15
ZrmI AGTACT 2 cut(s) 13, 323
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.