RchiOBHm_Chr7g0236071

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000101
Physical Location & Seq
Forward (+)
60948251 .. 60949567
1317 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ21156

Sequence Viewer

Length: 1005 bp
ATGATGACCTTAACGAATATGCTATTCAAATATTCAATTCTATGGCAAACGCCGACCTCCTCGACGAAGCCAAAGAGCTCTCTCTCTGACCAGGGCATACTGCCTGACGTGGCTGTCCTCACCATTGTCATCGGGGAATATGCCTTTGCTGGCGAGATCAAGGCTGCTCTCAAGGTCTACCAGCGCATGTTAGCCACCGGTGTCTCCCCCACCTCCCACACTTACACTCTACTCATCATGGCCCTTGTAACAGACTCTTCCGATGTCAATTATGTTGGCCTTGCCAAGAAGTATTTTATGGAAATGTTGGGTAAGGGATTGAAGCCCCATGATGTGTCCTATATCTCTGTCTTTGATGCCATTGCCGTCTGGGAGTCGGTGGAGAAGGCCAGGGAATTCCTTGAGCAGATAAAAGCAAAGAGGTTCAGCCTTAAGTCCAATGTTTTCTACTTTGACGAAGCCCACCTCACAGAGGCAATGAAGATAACGAAGTTGCTCCATGATCTCGCCAACAACACGACTGACAAGGATATACAAAAGCTCTTCCGCAAGTGGTGCACCAGTGGACATGGCTTCCAGAAAGAGTCTATGAAGATGTACAAAACTCTGGTGAAGGATGGTAATGCAGACGAGGCCATGGAGGTTCTTATGTTGTTCATTAAGGGCATAGAACCGGCTGTCCTAATCCATACCTGCGTTATTGAGACCTACGTCAATGCTGGCAAGATCAAGGGTGCTCTTGAGGCTTACAAGGACATGAAGTTTTTGCTTGAGATGATGGATAAAGGGAAGCGGCCCAATGCTTCTACCTACACTGTGGTGATAGAGGGCTTTGCAAAGCAGGAGGACAAGGCAGCTGAGGAGGAGGGAAAAGAGTTGGTGGAGGTGATGATGGGTAAGGGGTTTGTGCCAAACGCAAAGGCTATGATGGAGGTTTTAAAGGGAAGACCAACAGCTGTGATAAGAAGGGTCATGAACATTGTCCTTTCTAAGTTGAAGGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

334

Amino Acids

37.43

Weight (kDa)

8.96

Isoelectric Point (pI)

25.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 35 - 82 7.9e-10 PPR repeat family
PPR_2 PF13041 227 - 280 8.2e-07 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 113
Acc36I ACCTGC 1 cut(s) 701
AccI GTMKAC 1 cut(s) 177
AciI CCGC 2 cut(s) 547, 793
AcsI RAATTY 1 cut(s) 395
AfaI GTAC 1 cut(s) 599
AfiI CCNNNNNNNGG 1 cut(s) 472
AflII CTTAAG 1 cut(s) 431
AgeI ACCGGT 1 cut(s) 197
AgsI TTSAA 4 cut(s) 28, 36, 322, 997
AjiI CACGTC 1 cut(s) 109
AjnI CCWGG 2 cut(s) 90, 389
AleI CACNNNNGTG 1 cut(s) 818
AloI GAACNNNNNNTCC 2 cut(s) 663, 695
AluBI AGCT 4 cut(s) 78, 541, 857, 956
AluI AGCT 4 cut(s) 78, 541, 857, 956
Alw21I GWGCWC 3 cut(s) 80, 560, 739
Alw26I GTCTC 2 cut(s) 208, 698
Alw44I GTGCAC 1 cut(s) 556
AoxI GGCC 5 cut(s) 240, 277, 387, 633, 794
ApaLI GTGCAC 1 cut(s) 556
ApeKI GCWGC 2 cut(s) 164, 854
ApoI RAATTY 1 cut(s) 395
AsiGI ACCGGT 1 cut(s) 197
AspLEI GCGC 1 cut(s) 186
AspS9I GGNCC 2 cut(s) 241, 795
AsuHPI GGTGA 4 cut(s) 112, 622, 832, 898
BaeGI GKGCMC 1 cut(s) 560
BanII GRGCYC 1 cut(s) 80
BbsI GAAGAC 1 cut(s) 952
Bbv12I GWGCWC 3 cut(s) 80, 560, 739
BbvCI CCTCAGC 1 cut(s) 858
BbvI GCAGC 2 cut(s) 151, 866
BccI CCATC 4 cut(s) 611, 772, 886, 922
BceAI ACGGC 1 cut(s) 350
BciT130I CCWGG 2 cut(s) 92, 391
BcoDI GTCTC 2 cut(s) 208, 698
BfrI CTTAAG 1 cut(s) 431
BfuAI ACCTGC 1 cut(s) 701
BisI GCNGC 3 cut(s) 165, 794, 855
BlsI GCNGC 3 cut(s) 166, 795, 856
Bme1390I CCNGG 2 cut(s) 92, 391
BmgBI CACGTC 1 cut(s) 109
BmgT120I GGNCC 2 cut(s) 241, 795
BmrFI CCNGG 2 cut(s) 92, 391
BmsI GCATC 1 cut(s) 346
BoxI GACNNNNGTC 1 cut(s) 710
BpiI GAAGAC 1 cut(s) 952
Bpu10I CCTNAGC 1 cut(s) 858
BpuEI CTTGAG 4 cut(s) 155, 422, 761, 791
BsaI GGTCTC 1 cut(s) 698
BsaJI CCNNGG 3 cut(s) 91, 390, 636
BsaWI WCCGGW 1 cut(s) 197
Bsc4I CCNNNNNNNGG 1 cut(s) 472
Bse118I RCCGGY 2 cut(s) 197, 673
Bse1I ACTGG 1 cut(s) 561
Bse3DI GCAATG 2 cut(s) 360, 483
BseBI CCWGG 2 cut(s) 92, 391
BseDI CCNNGG 3 cut(s) 91, 390, 636
BseGI GGATG 1 cut(s) 622
BseLI CCNNNNNNNGG 1 cut(s) 472
BseMI GCAATG 2 cut(s) 360, 483
BseMII CTCAG 1 cut(s) 849
BseNI ACTGG 1 cut(s) 561
BseRI GAGGAG 3 cut(s) 49, 875, 878
BseSI GKGCMC 1 cut(s) 560
BseXI GCAGC 2 cut(s) 151, 866
BshFI GGCC 5 cut(s) 242, 279, 389, 635, 796
BshTI ACCGGT 1 cut(s) 197
BsiHKAI GWGCWC 3 cut(s) 80, 560, 739
BsiSI CCGG 2 cut(s) 198, 674
BslI CCNNNNNNNGG 1 cut(s) 472
BsmAI GTCTC 2 cut(s) 208, 698
BsnI GGCC 5 cut(s) 242, 279, 389, 635, 796
Bso31I GGTCTC 1 cut(s) 698
Bsp1286I GDGCHC 3 cut(s) 80, 560, 739
Bsp1407I TGTACA 1 cut(s) 597
Bsp143I GATC 3 cut(s) 156, 502, 726
Bsp19I CCATGG 1 cut(s) 636
BspACI CCGC 2 cut(s) 547, 793
BspANI GGCC 5 cut(s) 242, 279, 389, 635, 796
BspCNI CTCAG 1 cut(s) 850
BspHI TCATGA 1 cut(s) 972
BspMI ACCTGC 1 cut(s) 701
BspQI GCTCTTC 1 cut(s) 548
BspTI CTTAAG 1 cut(s) 431
BspTNI GGTCTC 1 cut(s) 698
BsrDI GCAATG 2 cut(s) 360, 483
BsrFI RCCGGY 2 cut(s) 197, 673
BsrGI TGTACA 1 cut(s) 597
BsrI ACTGG 1 cut(s) 561
BssAI RCCGGY 2 cut(s) 197, 673
BssECI CCNNGG 3 cut(s) 91, 390, 636
BssMI GATC 3 cut(s) 156, 502, 726
BssT1I CCWWGG 1 cut(s) 636
Bst2UI CCWGG 2 cut(s) 92, 391
Bst4CI ACNGT 1 cut(s) 817
Bst6I CTCTTC 2 cut(s) 262, 548
BstAFI CTTAAG 1 cut(s) 431
BstAPI GCANNNNNTGC 1 cut(s) 555
BstAUI TGTACA 1 cut(s) 597
BstC8I GCNNGC 2 cut(s) 151, 721
BstDEI CTNAG 2 cut(s) 858, 990
BstDSI CCRYGG 1 cut(s) 636
BstENI CCTNNNNNAGG 1 cut(s) 470
BstF5I GGATG 1 cut(s) 622
BstHHI GCGC 1 cut(s) 186
BstKTI GATC 3 cut(s) 159, 505, 729
BstMAI GTCTC 2 cut(s) 208, 698
BstMBI GATC 3 cut(s) 156, 502, 726
BstMWI GCNNNNNNNGC 3 cut(s) 555, 632, 743
BstNI CCWGG 2 cut(s) 92, 391
BstNSI RCATGY 1 cut(s) 190
BstPAI GACNNNNGTC 1 cut(s) 710
BstSCI CCNGG 2 cut(s) 90, 389
BstSLI GKGCMC 1 cut(s) 560
BstV1I GCAGC 2 cut(s) 151, 866
BstV2I GAAGAC 1 cut(s) 952
BsuRI GGCC 5 cut(s) 242, 279, 389, 635, 796
BtgI CCRYGG 1 cut(s) 636
BtrI CACGTC 1 cut(s) 109
BtsCI GGATG 1 cut(s) 622
BtsIMutI CAGTG 2 cut(s) 568, 813
BveI ACCTGC 1 cut(s) 701
Cac8I GCNNGC 2 cut(s) 151, 721
CciI TCATGA 1 cut(s) 972
CfoI GCGC 1 cut(s) 186
Cfr10I RCCGGY 2 cut(s) 197, 673
Cfr13I GGNCC 2 cut(s) 241, 795
Csp6I GTAC 1 cut(s) 598
CspAI ACCGGT 1 cut(s) 197
CviAII CATG 8 cut(s) 187, 238, 329, 500, 569, 637, 757, 973
CviQI GTAC 1 cut(s) 598
DdeI CTNAG 2 cut(s) 858, 990
DpnI GATC 3 cut(s) 158, 504, 728
DpnII GATC 3 cut(s) 156, 502, 726
DraI TTTAAA 1 cut(s) 939
DrdI GACNNNNNNGTC 1 cut(s) 113
DseDI GACNNNNNNGTC 1 cut(s) 113
Eam1104I CTCTTC 2 cut(s) 262, 548
EarI CTCTTC 2 cut(s) 262, 548
Ecl136II GAGCTC 1 cut(s) 78
Eco130I CCWWGG 1 cut(s) 636
Eco24I GRGCYC 1 cut(s) 80
Eco31I GGTCTC 1 cut(s) 698
Eco53kI GAGCTC 1 cut(s) 78
EcoICRI GAGCTC 1 cut(s) 78
EcoNI CCTNNNNNAGG 1 cut(s) 470
EcoRI GAATTC 1 cut(s) 395
EcoRII CCWGG 2 cut(s) 90, 389
EcoT14I CCWWGG 1 cut(s) 636
EcoT38I GRGCYC 1 cut(s) 80
ErhI CCWWGG 1 cut(s) 636
FaeI CATG 8 cut(s) 190, 241, 332, 503, 572, 640, 760, 976
FatI CATG 8 cut(s) 186, 237, 328, 499, 568, 636, 756, 972
FblI GTMKAC 1 cut(s) 177
Fnu4HI GCNGC 3 cut(s) 165, 794, 855
FokI GGATG 1 cut(s) 629
FriOI GRGCYC 1 cut(s) 80
Fsp4HI GCNGC 3 cut(s) 165, 794, 855
GlaI GCGC 1 cut(s) 185
GluI GCNGC 3 cut(s) 165, 794, 855
HaeIII GGCC 5 cut(s) 242, 279, 389, 635, 796
HapII CCGG 2 cut(s) 198, 674
HhaI GCGC 1 cut(s) 186
Hin1II CATG 8 cut(s) 190, 241, 332, 503, 572, 640, 760, 976
Hin6I GCGC 1 cut(s) 184
HinP1I GCGC 1 cut(s) 184
HinfI GANTC 3 cut(s) 254, 374, 584
HpaII CCGG 2 cut(s) 198, 674
HphI GGTGA 4 cut(s) 112, 622, 832, 898
Hpy166II GTNNAC 3 cut(s) 178, 558, 566
Hpy188I TCNGA 2 cut(s) 88, 262
Hpy188III TCNNGA 3 cut(s) 577, 740, 973
Hpy8I GTNNAC 3 cut(s) 178, 558, 566
Hpy99I CGWCG 1 cut(s) 67
HpyAV CCTTC 4 cut(s) 379, 607, 960, 991
HpyCH4III ACNGT 1 cut(s) 817
HpyCH4IV ACGT 2 cut(s) 108, 711
HpyCH4V TGCA 3 cut(s) 558, 626, 836
HpyF10VI GCNNNNNNNGC 3 cut(s) 555, 632, 743
HpyF3I CTNAG 2 cut(s) 858, 990
HpySE526I ACGT 2 cut(s) 108, 711
Hsp92II CATG 8 cut(s) 190, 241, 332, 503, 572, 640, 760, 976
HspAI GCGC 1 cut(s) 184
Kzo9I GATC 3 cut(s) 156, 502, 726
LguI GCTCTTC 1 cut(s) 548
LmnI GCTCC 1 cut(s) 501
Lsp1109I GCAGC 2 cut(s) 151, 866
LweI GCATC 1 cut(s) 346
MaeII ACGT 2 cut(s) 108, 711
MaeIII GTNAC 1 cut(s) 247
MalI GATC 3 cut(s) 158, 504, 728
MboI GATC 3 cut(s) 156, 502, 726
MboII GAAGA 5 cut(s) 249, 493, 535, 604, 957
MhlI GDGCHC 3 cut(s) 80, 560, 739
MluCI AATT 3 cut(s) 36, 268, 395
MlyI GAGTC 3 cut(s) 248, 383, 593
MseI TTAA 4 cut(s) 11, 432, 660, 938
MslI CAYNNNNRTG 1 cut(s) 818
MspA1I CMGCKG 2 cut(s) 857, 956
MspCI CTTAAG 1 cut(s) 431
MspI CCGG 2 cut(s) 198, 674
MspR9I CCNGG 2 cut(s) 92, 391
MvaI CCWGG 2 cut(s) 92, 391
MwoI GCNNNNNNNGC 3 cut(s) 555, 632, 743
NcoI CCATGG 1 cut(s) 636
NdeII GATC 3 cut(s) 156, 502, 726
NlaIII CATG 8 cut(s) 190, 241, 332, 503, 572, 640, 760, 976
NspI RCATGY 1 cut(s) 190
OliI CACNNNNGTG 1 cut(s) 818
PagI TCATGA 1 cut(s) 972
PciSI GCTCTTC 1 cut(s) 548
PinAI ACCGGT 1 cut(s) 197
PkrI GCNGC 3 cut(s) 166, 795, 856
PleI GAGTC 3 cut(s) 248, 382, 592
PpsI GAGTC 3 cut(s) 248, 382, 592
PshAI GACNNNNGTC 1 cut(s) 710
Psp124BI GAGCTC 1 cut(s) 80
Psp6I CCWGG 2 cut(s) 90, 389
PspGI CCWGG 2 cut(s) 90, 389
PspPI GGNCC 2 cut(s) 241, 795
PvuII CAGCTG 2 cut(s) 857, 956
RsaI GTAC 1 cut(s) 599
RsaNI GTAC 1 cut(s) 598
RseI CAYNNNNRTG 1 cut(s) 818
SacI GAGCTC 1 cut(s) 80
SapI GCTCTTC 1 cut(s) 548
SaqAI TTAA 4 cut(s) 11, 432, 660, 938
SatI GCNGC 3 cut(s) 165, 794, 855
Sau3AI GATC 3 cut(s) 156, 502, 726
Sau96I GGNCC 2 cut(s) 241, 795
SchI GAGTC 3 cut(s) 248, 383, 593
ScrFI CCNGG 2 cut(s) 92, 391
SduI GDGCHC 3 cut(s) 80, 560, 739
SfaNI GCATC 1 cut(s) 346
SgrAI CRCCGGYG 1 cut(s) 197
SmiMI CAYNNNNRTG 1 cut(s) 818
SmlI CTYRAG 5 cut(s) 170, 401, 431, 740, 770
SmoI CTYRAG 5 cut(s) 170, 401, 431, 740, 770
Sse9I AATT 3 cut(s) 36, 268, 395
SsiI CCGC 2 cut(s) 547, 793
SspI AATATT 1 cut(s) 32
SstI GAGCTC 1 cut(s) 80
StyD4I CCNGG 2 cut(s) 90, 389
StyI CCWWGG 1 cut(s) 636
TaaI ACNGT 1 cut(s) 817
TaiI ACGT 2 cut(s) 111, 714
TaqI TCGA 1 cut(s) 62
TasI AATT 3 cut(s) 36, 268, 395
TatI WGTACW 1 cut(s) 597
TauI GCSGC 1 cut(s) 796
Tru1I TTAA 4 cut(s) 11, 432, 660, 938
Tru9I TTAA 4 cut(s) 11, 432, 660, 938
TscAI CASTG 2 cut(s) 568, 820
TseI GCWGC 2 cut(s) 164, 854
TspDTI ATGAA 5 cut(s) 494, 605, 646, 773, 989
TspRI CASTG 2 cut(s) 568, 820
Vha464I CTTAAG 1 cut(s) 431
VneI GTGCAC 1 cut(s) 556
XagI CCTNNNNNAGG 1 cut(s) 470
XapI RAATTY 1 cut(s) 395
XceI RCATGY 1 cut(s) 190
XmiI GTMKAC 1 cut(s) 177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.