Rmu_sc0008941.1_g000002

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008941.1
OG0000101
Physical Location & Seq
Reverse (-)
5390 .. 6574
1185 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008941.1_g000002.1.cds

Sequence Viewer

Length: 1185 bp
atggaggttttcgaggaagcctccaaagactgtgaggacgagtacttgacgagagtattcggcacgattgcggtctacaactcccttaacgattgtgcaattaagttgttcgatgctatgggaggtatcggcatcactgacaaagccaaagagctgtttaagcctgtctctaacttgggcattctgtctccagtggctatcttcactatggtcgttatgatctattctgatgctcgcaatgctgagggtgctctcaaggtctaccgtcacatgatagccactggtgtcacccctgtctccttcacttacactatactcatctccacgcttgcacaagacttttccgatgtaaaattccttgggtatgccaagaagtattttcttgaaatattggataaggggatgaagcccaatcctacaccctacatcaatgttatggatgccattgcctaccgagagaccaaggagaaggccaaggtgtttcttgagcagataaaagccaaggggttcatccctcccaaacatggttttcaatacaaagaaggccacttcaccgaagcattccaggcactgaagatttatgctgatcttctctacaatgatgccactgacaaggatgttaaagtgttcttccgatttgtgcgcaaccacactggcacccataagaaactggcgaacaagatgtacaatgctttggtagaggatggaaatgtaaacgaggccttagagttttataacacaattcaggagacgggtgcagagcccctgatcctaatccacacttccgttattaaaacctaccttgagtttggtaagaccaggggtgctctggaggcgtacctggccatgttagctgctggggttgcccccaactcctacacttacactgttttaatcaagggactcagtgctgaccccaacttctttggagatgccaagaagtatttgctcgagatgatggacaaggggaagcggcccaatgctgctaccttcactgctgtgacagagggctttgcaaagcaggagaacaaggcagctgaggaggagggaaaagagtttgtgcagctaatgatcgataaggggtttgttcctaatgcgaaggctatgatggatgttttaaagggtagaccaacacctgtaattagaagtgccatgagtattgttctttccaccttgaagcagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

394

Amino Acids

43.97

Weight (kDa)

7.64

Isoelectric Point (pI)

21.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 735
Acc16I TGCGCA 1 cut(s) 644
AccB1I GGYRCC 1 cut(s) 656
AccI GTMKAC 3 cut(s) 75, 261, 1126
AciI CCGC 2 cut(s) 71, 973
AclWI GGATC 1 cut(s) 763
AcoI YGGCCR 1 cut(s) 843
AcsI RAATTY 1 cut(s) 353
AcuI CTGAAG 1 cut(s) 593
AfaI GTAC 3 cut(s) 44, 686, 839
AfiI CCNNNNNNNGG 1 cut(s) 524
AgsI TTSAA 3 cut(s) 386, 533, 1177
AjnI CCWGG 3 cut(s) 564, 818, 840
AleI CACNNNNGTG 1 cut(s) 998
AluBI AGCT 4 cut(s) 154, 854, 1037, 1066
AluI AGCT 4 cut(s) 154, 854, 1037, 1066
Alw21I GWGCWC 2 cut(s) 253, 829
Alw26I GTCTC 5 cut(s) 172, 192, 301, 452, 743
AlwI GGATC 1 cut(s) 763
AlwNI CAGNNNCTG 1 cut(s) 571
Ama87I CYCGRG 1 cut(s) 950
AoxI GGCC 5 cut(s) 471, 544, 720, 843, 974
ApeKI GCWGC 4 cut(s) 854, 983, 1034, 1063
ApoI RAATTY 1 cut(s) 353
AspLEI GCGC 1 cut(s) 645
AspS9I GGNCC 1 cut(s) 975
AsuHPI GGTGA 2 cut(s) 280, 544
AvaI CYCGRG 1 cut(s) 950
BalI TGGCCA 1 cut(s) 845
BanI GGYRCC 1 cut(s) 656
BanII GRGCYC 1 cut(s) 765
Bbv12I GWGCWC 2 cut(s) 253, 829
BbvCI CCTCAGC 2 cut(s) 243, 1038
BbvI GCAGC 4 cut(s) 841, 970, 1046, 1075
BccI CCATC 3 cut(s) 698, 952, 1102
BciT130I CCWGG 3 cut(s) 566, 820, 842
BcoDI GTCTC 5 cut(s) 172, 192, 301, 452, 743
BisI GCNGC 5 cut(s) 855, 974, 984, 1035, 1064
BlsI GCNGC 5 cut(s) 856, 975, 985, 1036, 1065
BmcAI AGTACT 1 cut(s) 44
Bme1390I CCNGG 3 cut(s) 566, 820, 842
BmeT110I CYCGRG 1 cut(s) 950
BmgT120I GGNCC 1 cut(s) 975
BmiI GGNNCC 1 cut(s) 658
BmrFI CCNGG 3 cut(s) 566, 820, 842
BmsI GCATC 6 cut(s) 103, 141, 220, 430, 592, 922
BplI GAGNNNNNCTC 1 cut(s) 37
BpmI CTGGAG 2 cut(s) 174, 851
Bpu10I CCTNAGC 2 cut(s) 243, 1038
BpuEI CTTGAG 3 cut(s) 239, 506, 824
Bsa29I ATCGAT 1 cut(s) 1074
BsaBI GATNNNNATC 1 cut(s) 773
BsaI GGTCTC 1 cut(s) 452
BsaJI CCNNGG 5 cut(s) 358, 462, 474, 501, 819
Bsc4I CCNNNNNNNGG 1 cut(s) 524
Bse1I ACTGG 4 cut(s) 191, 286, 658, 675
Bse3DI GCAATG 2 cut(s) 244, 444
Bse8I GATNNNNATC 1 cut(s) 773
BseBI CCWGG 3 cut(s) 566, 820, 842
BseCI ATCGAT 1 cut(s) 1074
BseDI CCNNGG 5 cut(s) 358, 462, 474, 501, 819
BseGI GGATG 6 cut(s) 408, 445, 510, 622, 709, 1117
BseJI GATNNNNATC 1 cut(s) 773
BseLI CCNNNNNNNGG 1 cut(s) 524
BseMI GCAATG 2 cut(s) 244, 444
BseMII CTCAG 3 cut(s) 234, 919, 1029
BseNI ACTGG 4 cut(s) 191, 286, 658, 675
BseRI GAGGAG 2 cut(s) 1055, 1058
BseXI GCAGC 4 cut(s) 841, 970, 1046, 1075
BseYI CCCAGC 1 cut(s) 857
BsgI GTGCAG 2 cut(s) 777, 1082
BshFI GGCC 5 cut(s) 473, 546, 722, 845, 976
BshNI GGYRCC 1 cut(s) 656
BshVI ATCGAT 1 cut(s) 1074
BsiHKAI GWGCWC 2 cut(s) 253, 829
BsiHKCI CYCGRG 1 cut(s) 950
BslFI GGGAC 1 cut(s) 915
BslI CCNNNNNNNGG 1 cut(s) 524
BsmAI GTCTC 5 cut(s) 172, 192, 301, 452, 743
BsmBI CGTCTC 1 cut(s) 743
BsmFI GGGAC 1 cut(s) 915
BsmI GAATGC 2 cut(s) 180, 560
BsnI GGCC 5 cut(s) 473, 546, 722, 845, 976
Bso31I GGTCTC 1 cut(s) 452
BsoBI CYCGRG 1 cut(s) 950
Bsp1286I GDGCHC 3 cut(s) 253, 765, 829
Bsp1407I TGTACA 1 cut(s) 684
Bsp143I GATC 4 cut(s) 219, 586, 768, 1071
BspACI CCGC 2 cut(s) 71, 973
BspANI GGCC 5 cut(s) 473, 546, 722, 845, 976
BspCNI CTCAG 3 cut(s) 235, 918, 1030
BspDI ATCGAT 1 cut(s) 1074
BspLI GGNNCC 1 cut(s) 658
BspPI GGATC 1 cut(s) 763
BspT107I GGYRCC 1 cut(s) 656
BspTNI GGTCTC 1 cut(s) 452
BsrDI GCAATG 2 cut(s) 244, 444
BsrGI TGTACA 1 cut(s) 684
BsrI ACTGG 4 cut(s) 191, 286, 658, 675
BssECI CCNNGG 5 cut(s) 358, 462, 474, 501, 819
BssMI GATC 4 cut(s) 219, 586, 768, 1071
BssT1I CCWWGG 4 cut(s) 358, 462, 474, 501
Bst2UI CCWGG 3 cut(s) 566, 820, 842
Bst4CI ACNGT 3 cut(s) 32, 266, 889
BstAUI TGTACA 1 cut(s) 684
BstC8I GCNNGC 2 cut(s) 235, 330
BstDEI CTNAG 4 cut(s) 243, 724, 905, 1038
BstF5I GGATG 6 cut(s) 408, 445, 510, 622, 709, 1117
BstHHI GCGC 1 cut(s) 645
BstKTI GATC 4 cut(s) 222, 589, 771, 1074
BstMAI GTCTC 5 cut(s) 172, 192, 301, 452, 743
BstMBI GATC 4 cut(s) 219, 586, 768, 1071
BstMWI GCNNNNNNNGC 8 cut(s) 160, 239, 248, 566, 833, 842, 851, 863
BstNI CCWGG 3 cut(s) 566, 820, 842
BstSCI CCNGG 3 cut(s) 564, 818, 840
BstV1I GCAGC 4 cut(s) 841, 970, 1046, 1075
Bsu15I ATCGAT 1 cut(s) 1074
BsuRI GGCC 5 cut(s) 473, 546, 722, 845, 976
BsuTUI ATCGAT 1 cut(s) 1074
BtsCI GGATG 6 cut(s) 408, 445, 510, 622, 709, 1117
BtsI GCAGTG 1 cut(s) 993
BtsIMutI CAGTG 9 cut(s) 135, 198, 279, 569, 606, 651, 885, 913, 993
Cac8I GCNNGC 2 cut(s) 235, 330
CaiI CAGNNNCTG 1 cut(s) 571
CfoI GCGC 1 cut(s) 645
Cfr13I GGNCC 1 cut(s) 975
ClaI ATCGAT 1 cut(s) 1074
Csp6I GTAC 3 cut(s) 43, 685, 838
CviAII CATG 4 cut(s) 271, 524, 847, 1153
CviQI GTAC 3 cut(s) 43, 685, 838
DdeI CTNAG 4 cut(s) 243, 724, 905, 1038
DpnI GATC 4 cut(s) 221, 588, 770, 1073
DpnII GATC 4 cut(s) 219, 586, 768, 1071
DraI TTTAAA 1 cut(s) 1119
EaeI YGGCCR 1 cut(s) 843
Eco130I CCWWGG 4 cut(s) 358, 462, 474, 501
Eco147I AGGCCT 1 cut(s) 722
Eco24I GRGCYC 1 cut(s) 765
Eco31I GGTCTC 1 cut(s) 452
Eco57I CTGAAG 1 cut(s) 593
Eco88I CYCGRG 1 cut(s) 950
EcoRII CCWGG 3 cut(s) 564, 818, 840
EcoT14I CCWWGG 4 cut(s) 358, 462, 474, 501
EcoT38I GRGCYC 1 cut(s) 765
ErhI CCWWGG 4 cut(s) 358, 462, 474, 501
Esp3I CGTCTC 1 cut(s) 743
FaeI CATG 4 cut(s) 274, 527, 850, 1156
FaqI GGGAC 1 cut(s) 915
FatI CATG 4 cut(s) 270, 523, 846, 1152
FblI GTMKAC 3 cut(s) 75, 261, 1126
Fnu4HI GCNGC 5 cut(s) 855, 974, 984, 1035, 1064
FokI GGATG 6 cut(s) 415, 452, 497, 629, 716, 1124
FriOI GRGCYC 1 cut(s) 765
Fsp4HI GCNGC 5 cut(s) 855, 974, 984, 1035, 1064
FspI TGCGCA 1 cut(s) 644
GlaI GCGC 1 cut(s) 644
GluI GCNGC 5 cut(s) 855, 974, 984, 1035, 1064
GsaI CCCAGC 1 cut(s) 861
GsuI CTGGAG 2 cut(s) 174, 851
HaeIII GGCC 5 cut(s) 473, 546, 722, 845, 976
HhaI GCGC 1 cut(s) 645
Hin1II CATG 4 cut(s) 274, 527, 850, 1156
Hin6I GCGC 1 cut(s) 643
HinP1I GCGC 1 cut(s) 643
HinfI GANTC 1 cut(s) 903
HphI GGTGA 2 cut(s) 280, 544
Hpy166II GTNNAC 4 cut(s) 76, 262, 715, 1127
Hpy188I TCNGA 3 cut(s) 229, 346, 635
Hpy188III TCNNGA 5 cut(s) 383, 485, 746, 830, 952
Hpy8I GTNNAC 4 cut(s) 76, 262, 715, 1127
HpyAV CCTTC 5 cut(s) 310, 463, 536, 1000, 1093
HpyCH4III ACNGT 3 cut(s) 32, 266, 889
HpyCH4V TGCA 5 cut(s) 98, 332, 758, 1016, 1063
HpyF10VI GCNNNNNNNGC 8 cut(s) 160, 239, 248, 566, 833, 842, 851, 863
HpyF3I CTNAG 4 cut(s) 243, 724, 905, 1038
Hsp92II CATG 4 cut(s) 274, 527, 850, 1156
HspAI GCGC 1 cut(s) 643
Kzo9I GATC 4 cut(s) 219, 586, 768, 1071
Lsp1109I GCAGC 4 cut(s) 841, 970, 1046, 1075
LweI GCATC 6 cut(s) 103, 141, 220, 430, 592, 922
MaeIII GTNAC 3 cut(s) 266, 286, 1000
MalI GATC 4 cut(s) 221, 588, 770, 1073
MboI GATC 4 cut(s) 219, 586, 768, 1071
MboII GAAGA 4 cut(s) 193, 581, 586, 622
MhlI GDGCHC 3 cut(s) 253, 765, 829
MlsI TGGCCA 1 cut(s) 845
MluCI AATT 4 cut(s) 99, 353, 741, 1140
MluNI TGGCCA 1 cut(s) 845
MlyI GAGTC 1 cut(s) 897
Mox20I TGGCCA 1 cut(s) 845
MscI TGGCCA 1 cut(s) 845
MseI TTAA 7 cut(s) 87, 102, 159, 621, 792, 893, 1118
MslI CAYNNNNRTG 1 cut(s) 998
Msp20I TGGCCA 1 cut(s) 845
MspA1I CMGCKG 1 cut(s) 1037
MspR9I CCNGG 3 cut(s) 566, 820, 842
Mva1269I GAATGC 2 cut(s) 180, 560
MvaI CCWGG 3 cut(s) 566, 820, 842
MwoI GCNNNNNNNGC 8 cut(s) 160, 239, 248, 566, 833, 842, 851, 863
NdeII GATC 4 cut(s) 219, 586, 768, 1071
NlaIII CATG 4 cut(s) 274, 527, 850, 1156
NlaIV GGNNCC 1 cut(s) 658
NmuCI GTSAC 3 cut(s) 266, 286, 1000
NsbI TGCGCA 1 cut(s) 644
OliI CACNNNNGTG 1 cut(s) 998
PaeR7I CTCGAG 1 cut(s) 950
PceI AGGCCT 1 cut(s) 722
PctI GAATGC 2 cut(s) 180, 560
PkrI GCNGC 5 cut(s) 856, 975, 985, 1036, 1065
PleI GAGTC 1 cut(s) 897
PpsI GAGTC 1 cut(s) 897
PsiI TTATAA 1 cut(s) 735
Psp6I CCWGG 3 cut(s) 564, 818, 840
PspFI CCCAGC 1 cut(s) 857
PspGI CCWGG 3 cut(s) 564, 818, 840
PspN4I GGNNCC 1 cut(s) 658
PspPI GGNCC 1 cut(s) 975
PsrI GAACNNNNNNTAC 2 cut(s) 668, 700
PstNI CAGNNNCTG 1 cut(s) 571
PvuII CAGCTG 1 cut(s) 1037
RsaI GTAC 3 cut(s) 44, 686, 839
RsaNI GTAC 3 cut(s) 43, 685, 838
RseI CAYNNNNRTG 1 cut(s) 998
SaqAI TTAA 7 cut(s) 87, 102, 159, 621, 792, 893, 1118
SatI GCNGC 5 cut(s) 855, 974, 984, 1035, 1064
Sau3AI GATC 4 cut(s) 219, 586, 768, 1071
Sau96I GGNCC 1 cut(s) 975
ScaI AGTACT 1 cut(s) 44
SchI GAGTC 1 cut(s) 897
ScrFI CCNGG 3 cut(s) 566, 820, 842
SduI GDGCHC 3 cut(s) 253, 765, 829
SfaNI GCATC 6 cut(s) 103, 141, 220, 430, 592, 922
Sfr274I CTCGAG 1 cut(s) 950
SlaI CTCGAG 1 cut(s) 950
SmiMI CAYNNNNRTG 1 cut(s) 998
SmlI CTYRAG 4 cut(s) 254, 485, 803, 950
SmoI CTYRAG 4 cut(s) 254, 485, 803, 950
Sse9I AATT 4 cut(s) 99, 353, 741, 1140
SseBI AGGCCT 1 cut(s) 722
SsiI CCGC 2 cut(s) 71, 973
SspI AATATT 1 cut(s) 390
StuI AGGCCT 1 cut(s) 722
StyD4I CCNGG 3 cut(s) 564, 818, 840
StyI CCWWGG 4 cut(s) 358, 462, 474, 501
TaaI ACNGT 3 cut(s) 32, 266, 889
TaqI TCGA 4 cut(s) 12, 111, 951, 1074
TasI AATT 4 cut(s) 99, 353, 741, 1140
TatI WGTACW 2 cut(s) 42, 684
TauI GCSGC 1 cut(s) 976
Tru1I TTAA 7 cut(s) 87, 102, 159, 621, 792, 893, 1118
Tru9I TTAA 7 cut(s) 87, 102, 159, 621, 792, 893, 1118
TscAI CASTG 9 cut(s) 142, 198, 286, 576, 613, 658, 892, 913, 1000
TseFI GTSAC 3 cut(s) 266, 286, 1000
TseI GCWGC 4 cut(s) 854, 983, 1034, 1063
Tsp45I GTSAC 3 cut(s) 266, 286, 1000
TspDTI ATGAA 2 cut(s) 419, 499
TspGWI ACGGA 1 cut(s) 775
TspRI CASTG 9 cut(s) 142, 198, 286, 576, 613, 658, 892, 913, 1000
XapI RAATTY 1 cut(s) 353
XcmI CCANNNNNNNNNTGG 1 cut(s) 826
XhoI CTCGAG 1 cut(s) 950
XmiI GTMKAC 3 cut(s) 75, 261, 1126
ZrmI AGTACT 1 cut(s) 44
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.