FvH4_5g34900

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000101
Physical Location & Seq
Forward (+)
25541780 .. 25543011
1232 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g34900.t1

Sequence Viewer

Length: 1143 bp
ATGGCGGAGACTAGTTCCCCCAATTCTTCTGCTGATGTTCTAAAGGAATATGCCATGAGGGTTTTCAAGGAGGCGACCAAAGACTGTGGGGACATTTTGTTTCAAGTAAAATTTGACCTGATTCGGGACTACAAATCCCTTCATCAAAATGCAGCTCATTTGTTCAAGTTTATAGCAAATTCTGGCCTGGTTGACTTTCCCGCAGAGCTTAAGGCTCTCTCTGAGGCAGCAGTACTTTCCGATGTGGCTGTACACACCCTTGTTATTGGGGTATACCTCACTGAACAGAAGACCAAGGCTGCTCTCAAGGCCTTTCAGCACATGATATCCACTGGTGTCGCCCCGGCCTCCTGCATTAAGGGATTCAAACCCAATTCCGGGTCCTACATCTTACTGTTGAATTCCATTTCCTGCCGGGAGTCTAAGGCGAAGGCCAGGGAGTTCCTTGAAGAGATCAAAGCCAAGGGGTTTGTCCCTGCACCAAATCGCTATCAATTTGAAGTAGGCCACTTCATAGAAGCGATGGCTGCAGTAAAGATATATGATGATCTGGAGCACAACATAAGTGATGAGGACATGCAAACGGTCTTTATGGAGTGGCGCACCAACCCTGGTCTCCTCCATAATGAGTCGATGAAGATGTACACGGCTTTGCTAGAGGATGACAATGTAGAGCAGGCTCAGGAGGTGTTCAAGCTCAGCGTTGAGAGGGGCATACTTCCCACAGTTGTACTCTATACCTGCGTTACTGAAACCTACTTCAGTTTTGGGAAGAACAAGGATGCTCTAGAGGCATACCAGGGGATGTTAGCTGCTGGTGTCGCCCTAAACTGCTACACTTACACCGTTTTAATCAAGGGACTCATTGATGACCCCAATTTCATTGGAGATGCCAAGAAGTGCTTGCTTGATATCATGGACAGGGATATGAGGCCCAATGCTGCTACCTACACTGTGGTGTTTGTGGGTTTTGTGAAGAAGGAGGACAAGGCAGCTGAGGAGGAGGGAAAAGAGTTGGTGAAGGTGATGATACGTAAGGGAAATGGGCCAAAGGCAAGGGAAATGATGCGGGTTTTACAAGACAATCCAACAACTCTGATAAGAAGGGTCCTCGACATTGTCTTTTCCAAGGTGAAGGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

381

Amino Acids

42.48

Weight (kDa)

6.05

Isoelectric Point (pI)

25.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 241 - 288 2e-08 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 749
AccI GTMKAC 1 cut(s) 273
AciI CCGC 3 cut(s) 5, 201, 1069
AcsI RAATTY 3 cut(s) 110, 178, 400
AcuI CTGAAG 1 cut(s) 745
AfaI GTAC 4 cut(s) 234, 252, 644, 732
AfiI CCNNNNNNNGG 3 cut(s) 124, 377, 378
AflII CTTAAG 1 cut(s) 209
AgsI TTSAA 8 cut(s) 67, 104, 166, 367, 400, 449, 500, 694
AhlI ACTAGT 1 cut(s) 11
AjnI CCWGG 4 cut(s) 186, 434, 610, 798
AleI CACNNNNGTG 1 cut(s) 956
AluBI AGCT 5 cut(s) 155, 208, 697, 812, 995
AluI AGCT 5 cut(s) 155, 208, 697, 812, 995
Alw21I GWGCWC 1 cut(s) 558
Alw26I GTCTC 2 cut(s) 2, 620
AoxI GGCC 7 cut(s) 184, 309, 345, 432, 505, 932, 1046
ApeKI GCWGC 7 cut(s) 152, 227, 299, 527, 812, 941, 992
ApoI RAATTY 3 cut(s) 110, 178, 400
AspLEI GCGC 1 cut(s) 603
AspS9I GGNCC 4 cut(s) 381, 933, 1046, 1108
AsuC2I CCSGG 3 cut(s) 344, 379, 416
AsuHPI GGTGA 2 cut(s) 1030, 1036
AvaII GGWCC 2 cut(s) 381, 1108
BbsI GAAGAC 1 cut(s) 296
Bbv12I GWGCWC 1 cut(s) 558
BbvCI CCTCAGC 1 cut(s) 996
BbvI GCAGC 7 cut(s) 164, 239, 286, 514, 799, 928, 1004
BccI CCATC 1 cut(s) 517
BceAI ACGGC 1 cut(s) 663
BciT130I CCWGG 4 cut(s) 188, 436, 612, 800
BcnI CCSGG 3 cut(s) 344, 379, 416
BcoDI GTCTC 2 cut(s) 2, 620
BcuI ACTAGT 1 cut(s) 11
BfaI CTAG 3 cut(s) 12, 656, 788
BfmI CTRYAG 1 cut(s) 528
BfrI CTTAAG 1 cut(s) 209
BfuAI ACCTGC 1 cut(s) 749
BisI GCNGC 7 cut(s) 153, 228, 300, 528, 813, 942, 993
BlpI GCTNAGC 1 cut(s) 698
BlsI GCNGC 7 cut(s) 154, 229, 301, 529, 814, 943, 994
BmcAI AGTACT 1 cut(s) 234
Bme1390I CCNGG 7 cut(s) 188, 344, 379, 416, 436, 612, 800
Bme18I GGWCC 2 cut(s) 381, 1108
BmgT120I GGNCC 4 cut(s) 381, 933, 1046, 1108
BmiI GGNNCC 2 cut(s) 382, 1109
BmrFI CCNGG 7 cut(s) 188, 344, 379, 416, 436, 612, 800
BmsI GCATC 3 cut(s) 772, 880, 1056
BpiI GAAGAC 1 cut(s) 296
BpmI CTGGAG 1 cut(s) 572
Bpu10I CCTNAGC 2 cut(s) 681, 996
Bpu1102I GCTNAGC 1 cut(s) 698
BpuEI CTTGAG 1 cut(s) 290
BpuMI CCSGG 3 cut(s) 344, 379, 416
BsaAI YACGTR 1 cut(s) 1034
BsaI GGTCTC 1 cut(s) 620
BsaJI CCNNGG 7 cut(s) 294, 342, 435, 462, 610, 799, 1128
Bsc4I CCNNNNNNNGG 3 cut(s) 124, 377, 378
Bse1I ACTGG 1 cut(s) 337
BseBI CCWGG 4 cut(s) 188, 436, 612, 800
BseDI CCNNGG 7 cut(s) 294, 342, 435, 462, 610, 799, 1128
BseGI GGATG 3 cut(s) 667, 787, 810
BseLI CCNNNNNNNGG 3 cut(s) 124, 377, 378
BseMII CTCAG 4 cut(s) 213, 695, 712, 987
BseNI ACTGG 1 cut(s) 337
BseRI GAGGAG 3 cut(s) 608, 1013, 1016
BseXI GCAGC 7 cut(s) 164, 239, 286, 514, 799, 928, 1004
BsgI GTGCAG 1 cut(s) 462
BshFI GGCC 7 cut(s) 186, 311, 347, 434, 507, 934, 1048
BsiHKAI GWGCWC 1 cut(s) 558
BsiSI CCGG 3 cut(s) 344, 378, 415
BslFI GGGAC 4 cut(s) 104, 140, 458, 873
BslI CCNNNNNNNGG 3 cut(s) 124, 377, 378
BsmAI GTCTC 2 cut(s) 2, 620
BsmFI GGGAC 4 cut(s) 104, 140, 458, 873
BsnI GGCC 7 cut(s) 186, 311, 347, 434, 507, 934, 1048
Bso31I GGTCTC 1 cut(s) 620
Bsp1286I GDGCHC 1 cut(s) 558
Bsp1407I TGTACA 2 cut(s) 250, 642
Bsp143I GATC 2 cut(s) 453, 547
Bsp1720I GCTNAGC 1 cut(s) 698
BspACI CCGC 3 cut(s) 5, 201, 1069
BspANI GGCC 7 cut(s) 186, 311, 347, 434, 507, 934, 1048
BspCNI CTCAG 4 cut(s) 214, 694, 711, 988
BspLI GGNNCC 2 cut(s) 382, 1109
BspMAI CTGCAG 1 cut(s) 532
BspMI ACCTGC 1 cut(s) 749
BspTI CTTAAG 1 cut(s) 209
BspTNI GGTCTC 1 cut(s) 620
BsrGI TGTACA 2 cut(s) 250, 642
BsrI ACTGG 1 cut(s) 337
BssECI CCNNGG 7 cut(s) 294, 342, 435, 462, 610, 799, 1128
BssMI GATC 2 cut(s) 453, 547
BssNAI GTATAC 1 cut(s) 274
BssT1I CCWWGG 3 cut(s) 294, 462, 1128
Bst1107I GTATAC 1 cut(s) 274
Bst2UI CCWGG 4 cut(s) 188, 436, 612, 800
Bst4CI ACNGT 6 cut(s) 86, 396, 586, 727, 847, 955
Bst6I CTCTTC 1 cut(s) 444
BstAFI CTTAAG 1 cut(s) 209
BstAUI TGTACA 2 cut(s) 250, 642
BstBAI YACGTR 1 cut(s) 1034
BstC8I GCNNGC 2 cut(s) 678, 905
BstDEI CTNAG 5 cut(s) 222, 423, 681, 698, 996
BstF5I GGATG 3 cut(s) 667, 787, 810
BstHHI GCGC 1 cut(s) 603
BstKTI GATC 2 cut(s) 456, 550
BstMAI GTCTC 2 cut(s) 2, 620
BstMBI GATC 2 cut(s) 453, 547
BstMWI GCNNNNNNNGC 4 cut(s) 308, 527, 791, 821
BstNI CCWGG 4 cut(s) 188, 436, 612, 800
BstNSI RCATGY 1 cut(s) 580
BstSCI CCNGG 7 cut(s) 186, 342, 377, 414, 434, 610, 798
BstSFI CTRYAG 1 cut(s) 528
BstSNI TACGTA 1 cut(s) 1034
BstV1I GCAGC 7 cut(s) 164, 239, 286, 514, 799, 928, 1004
BstV2I GAAGAC 1 cut(s) 296
BstZ17I GTATAC 1 cut(s) 274
BsuRI GGCC 7 cut(s) 186, 311, 347, 434, 507, 934, 1048
BtgZI GCGATG 1 cut(s) 536
BtsCI GGATG 3 cut(s) 667, 787, 810
BtsIMutI CAGTG 3 cut(s) 279, 330, 951
BveI ACCTGC 1 cut(s) 749
Cac8I GCNNGC 2 cut(s) 678, 905
CfoI GCGC 1 cut(s) 603
Cfr13I GGNCC 4 cut(s) 381, 933, 1046, 1108
Csp6I GTAC 4 cut(s) 233, 251, 643, 731
CspCI CAANNNNNGTGG 2 cut(s) 67, 102
CviAII CATG 4 cut(s) 55, 322, 577, 916
CviQI GTAC 4 cut(s) 233, 251, 643, 731
DdeI CTNAG 5 cut(s) 222, 423, 681, 698, 996
DpnI GATC 2 cut(s) 455, 549
DpnII GATC 2 cut(s) 453, 547
Eam1104I CTCTTC 1 cut(s) 444
EarI CTCTTC 1 cut(s) 444
EciI GGCGGA 1 cut(s) 20
Eco105I TACGTA 1 cut(s) 1034
Eco130I CCWWGG 3 cut(s) 294, 462, 1128
Eco147I AGGCCT 1 cut(s) 311
Eco31I GGTCTC 1 cut(s) 620
Eco32I GATATC 2 cut(s) 327, 913
Eco47I GGWCC 2 cut(s) 381, 1108
Eco57I CTGAAG 1 cut(s) 745
EcoO109I RGGNCCY 2 cut(s) 381, 1108
EcoRI GAATTC 1 cut(s) 400
EcoRII CCWGG 4 cut(s) 186, 434, 610, 798
EcoRV GATATC 2 cut(s) 327, 913
EcoT14I CCWWGG 3 cut(s) 294, 462, 1128
ErhI CCWWGG 3 cut(s) 294, 462, 1128
FaeI CATG 4 cut(s) 58, 325, 580, 919
FalI AAGNNNNNCTT 2 cut(s) 887, 919
FaqI GGGAC 4 cut(s) 104, 140, 458, 873
FatI CATG 4 cut(s) 54, 321, 576, 915
FauI CCCGC 2 cut(s) 208, 1062
FblI GTMKAC 1 cut(s) 273
Fnu4HI GCNGC 7 cut(s) 153, 228, 300, 528, 813, 942, 993
FokI GGATG 3 cut(s) 674, 794, 817
Fsp4HI GCNGC 7 cut(s) 153, 228, 300, 528, 813, 942, 993
FspBI CTAG 3 cut(s) 12, 656, 788
GlaI GCGC 1 cut(s) 602
GluI GCNGC 7 cut(s) 153, 228, 300, 528, 813, 942, 993
GsuI CTGGAG 1 cut(s) 572
HaeIII GGCC 7 cut(s) 186, 311, 347, 434, 507, 934, 1048
HapII CCGG 3 cut(s) 344, 378, 415
HhaI GCGC 1 cut(s) 603
Hin1II CATG 4 cut(s) 58, 325, 580, 919
Hin6I GCGC 1 cut(s) 601
HinP1I GCGC 1 cut(s) 601
HincII GTYRAC 1 cut(s) 193
HindII GTYRAC 1 cut(s) 193
HinfI GANTC 5 cut(s) 121, 363, 419, 629, 861
HpaII CCGG 3 cut(s) 344, 378, 415
HphI GGTGA 2 cut(s) 1030, 1036
Hpy166II GTNNAC 4 cut(s) 193, 253, 274, 645
Hpy188I TCNGA 3 cut(s) 223, 241, 1098
Hpy188III TCNNGA 4 cut(s) 125, 551, 683, 788
Hpy8I GTNNAC 4 cut(s) 193, 253, 274, 645
HpyAV CCTTC 6 cut(s) 149, 424, 973, 1015, 1098, 1129
HpyCH4III ACNGT 6 cut(s) 86, 396, 586, 727, 847, 955
HpyCH4IV ACGT 1 cut(s) 1033
HpyCH4V TGCA 5 cut(s) 152, 354, 479, 530, 580
HpyF10VI GCNNNNNNNGC 4 cut(s) 308, 527, 791, 821
HpyF3I CTNAG 5 cut(s) 222, 423, 681, 698, 996
HpySE526I ACGT 1 cut(s) 1033
Hsp92II CATG 4 cut(s) 58, 325, 580, 919
HspAI GCGC 1 cut(s) 601
Kzo9I GATC 2 cut(s) 453, 547
LmnI GCTCC 1 cut(s) 553
Lsp1109I GCAGC 7 cut(s) 164, 239, 286, 514, 799, 928, 1004
LweI GCATC 3 cut(s) 772, 880, 1056
MaeI CTAG 3 cut(s) 12, 656, 788
MaeII ACGT 1 cut(s) 1033
MaeIII GTNAC 1 cut(s) 745
MalI GATC 2 cut(s) 455, 549
MboI GATC 2 cut(s) 453, 547
MboII GAAGA 6 cut(s) 18, 301, 461, 649, 784, 988
MhlI GDGCHC 1 cut(s) 558
MluCI AATT 7 cut(s) 22, 110, 178, 373, 400, 494, 877
MlyI GAGTC 3 cut(s) 428, 638, 855
MmeI TCCRAC 1 cut(s) 1112
MseI TTAA 3 cut(s) 210, 357, 851
MslI CAYNNNNRTG 2 cut(s) 147, 956
MspA1I CMGCKG 1 cut(s) 995
MspCI CTTAAG 1 cut(s) 209
MspI CCGG 3 cut(s) 344, 378, 415
MspR9I CCNGG 7 cut(s) 188, 344, 379, 416, 436, 612, 800
MvaI CCWGG 4 cut(s) 188, 436, 612, 800
MwoI GCNNNNNNNGC 4 cut(s) 308, 527, 791, 821
NciI CCSGG 3 cut(s) 344, 379, 416
NdeII GATC 2 cut(s) 453, 547
NlaIII CATG 4 cut(s) 58, 325, 580, 919
NlaIV GGNNCC 2 cut(s) 382, 1109
NspI RCATGY 1 cut(s) 580
OliI CACNNNNGTG 1 cut(s) 956
PceI AGGCCT 1 cut(s) 311
PfeI GAWTC 2 cut(s) 121, 363
PflFI GACNNNGTC 1 cut(s) 1118
PkrI GCNGC 7 cut(s) 154, 229, 301, 529, 814, 943, 994
PleI GAGTC 3 cut(s) 427, 637, 855
PpsI GAGTC 3 cut(s) 427, 637, 855
Ppu21I YACGTR 1 cut(s) 1034
PpuMI RGGWCCY 2 cut(s) 381, 1108
Psp5II RGGWCCY 2 cut(s) 381, 1108
Psp6I CCWGG 4 cut(s) 186, 434, 610, 798
PspGI CCWGG 4 cut(s) 186, 434, 610, 798
PspN4I GGNNCC 2 cut(s) 382, 1109
PspPI GGNCC 4 cut(s) 381, 933, 1046, 1108
PspPPI RGGWCCY 2 cut(s) 381, 1108
PstI CTGCAG 1 cut(s) 532
PsyI GACNNNGTC 1 cut(s) 1118
PvuII CAGCTG 1 cut(s) 995
RsaI GTAC 4 cut(s) 234, 252, 644, 732
RsaNI GTAC 4 cut(s) 233, 251, 643, 731
RseI CAYNNNNRTG 2 cut(s) 147, 956
SaqAI TTAA 3 cut(s) 210, 357, 851
SatI GCNGC 7 cut(s) 153, 228, 300, 528, 813, 942, 993
Sau3AI GATC 2 cut(s) 453, 547
Sau96I GGNCC 4 cut(s) 381, 933, 1046, 1108
ScaI AGTACT 1 cut(s) 234
SchI GAGTC 3 cut(s) 428, 638, 855
ScrFI CCNGG 7 cut(s) 188, 344, 379, 416, 436, 612, 800
SduI GDGCHC 1 cut(s) 558
SfaNI GCATC 3 cut(s) 772, 880, 1056
SfcI CTRYAG 1 cut(s) 528
SinI GGWCC 2 cut(s) 381, 1108
SmiMI CAYNNNNRTG 2 cut(s) 147, 956
SmlI CTYRAG 2 cut(s) 209, 305
SmoI CTYRAG 2 cut(s) 209, 305
SnaBI TACGTA 1 cut(s) 1034
SpeI ACTAGT 1 cut(s) 11
Sse9I AATT 7 cut(s) 22, 110, 178, 373, 400, 494, 877
SseBI AGGCCT 1 cut(s) 311
SsiI CCGC 3 cut(s) 5, 201, 1069
SspMI CTAG 3 cut(s) 12, 656, 788
StuI AGGCCT 1 cut(s) 311
StyD4I CCNGG 7 cut(s) 186, 342, 377, 414, 434, 610, 798
StyI CCWWGG 3 cut(s) 294, 462, 1128
TaaI ACNGT 6 cut(s) 86, 396, 586, 727, 847, 955
TaiI ACGT 1 cut(s) 1036
TaqI TCGA 2 cut(s) 632, 1113
TasI AATT 7 cut(s) 22, 110, 178, 373, 400, 494, 877
TatI WGTACW 4 cut(s) 232, 250, 642, 730
TfiI GAWTC 2 cut(s) 121, 363
Tru1I TTAA 3 cut(s) 210, 357, 851
Tru9I TTAA 3 cut(s) 210, 357, 851
TscAI CASTG 3 cut(s) 286, 337, 958
TseI GCWGC 7 cut(s) 152, 227, 299, 527, 812, 941, 992
TspDTI ATGAA 4 cut(s) 131, 502, 650, 871
TspRI CASTG 3 cut(s) 286, 337, 958
Tth111I GACNNNGTC 1 cut(s) 1118
Vha464I CTTAAG 1 cut(s) 209
VpaK11BI GGWCC 2 cut(s) 381, 1108
XapI RAATTY 3 cut(s) 110, 178, 400
XbaI TCTAGA 1 cut(s) 787
XceI RCATGY 1 cut(s) 580
XmiI GTMKAC 1 cut(s) 273
XspI CTAG 3 cut(s) 12, 656, 788
ZrmI AGTACT 1 cut(s) 234
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.