RLG00000001129

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000101
Physical Location & Seq
Reverse (-)
10589130 .. 10590371
1242 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001129

Sequence Viewer

Length: 1242 bp
ATGGCGGACAGTAATTCCCCCAATTCTTCTGCCGATGACCTCAAGAAACATGTAATGGCTGTTTTCAAGGAAGCCACCAAAGACTGTGAGGACGTGTCCTTGAAAAGAATATTTGGCACCATTGGGAGGAGCTACGATTCCCTTAACGATTTTTCGATTGAGTTGTTCAATTCTATGGCAGATACCGGCATCATTGACAGAGCCCGAGAGATGTTTAGGCCTGTCTCTGACTTGGGCATTCTGTCTCCAGTGGCTGTCTTCACCATTGTGATTCTGATGTACGCCGGTAGTCGCAAGGCCAACAGTGCTCTCAAGGTCTACCAGCACATGATAGCCACTGGTGTCAACCCCGCCTGCTACACTTACGTTCAACTCATCTGTGTACTTGCAACAGACTTTTCCAATGTAAAGTTCCTTAGGTATGCCAAGAAGTATTTTCTTGAAATGTTGGATAAGGGGATGAAGCCCAATCCTACACCCTTCTGGAACATTATGAAGGCCATTGCCTACCGAGAGCCAGTGGAGAAGGCCAAGGAGTTTCTTGAGCAGATAAAGGCCAAGGGGTTCATGCCTCCCGACAGTGGTTTTCACTACAAAGAAGCCTACCTCGCCGAAGGAATGCAAACACTGAAGATGTATACTAATCTTGTCCACAATGAGACCATCGACAAGGATGTTAGAAAGTACTTCTACGTGTTGCGTGCCTGCCCTGGCCATGCTGAAAAACTGGCGAGCAAGATGTATACTGCTTTGGTAGATGATGGAAATGTGGATGAGGCCACAGAGTTCTTTAACGAAGTTGAGGAGACAGGTATAGAGCCCATGGTCGTAATCCACACCGCTGTTATCGAAGCCTATCTCTCGTTTGGCAAGACCAAGGGTGCTCTGGAGGCATACCTGGCCATGTTAGCTGTTGGGGTTGCCCCCAACTCCTACACTTACACCGTTTTAATCAAGGGACTCAGTGCTGACCCCAACTTCTTAGGAGATGCCAAGAAGTATTTGCTGGAGATGATGGACAAGGGGAAGCGGCCCAATGCTGCTACCTTCACTGCGGTGATAGAGGGCTTTGCAAAGCAGGAGGACGAGGCAGCTGAGGAGGAGGGAAAAGAGTTTGTGCAGGTAATGATGGATAAGGGGTTTGTTCCTAATGCGAAGGCTATGATGGACGTTTTAAAGGGTAGACCAACACCTGTTATTAGAAGTGCCATGAATATTGTTCTTTCCACCTTGAAGCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

414

Amino Acids

46.1

Weight (kDa)

5.98

Isoelectric Point (pI)

37.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_long PF17177 97 - 191 8.8e-06 Pentacotripeptide-repeat region of PRORP
TPR_24 PF23276 255 - 362 4.2e-09 Fungal tetratrico peptide repeats
PPR_3 PF13812 264 - 319 2e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 275 - 321 6.9e-10 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1111
AccB1I GGYRCC 1 cut(s) 116
AccI GTMKAC 4 cut(s) 318, 638, 743, 1183
AciI CCGC 5 cut(s) 5, 351, 840, 1030, 1055
AcoI YGGCCR 2 cut(s) 712, 900
AcuI CTGAAG 1 cut(s) 650
AfaI GTAC 3 cut(s) 281, 384, 686
AfiI CCNNNNNNNGG 2 cut(s) 126, 581
AflIII ACRYGT 3 cut(s) 49, 93, 693
AgsI TTSAA 6 cut(s) 67, 103, 169, 371, 443, 1234
AjiI CACGTC 1 cut(s) 94
AjnI CCWGG 2 cut(s) 709, 897
AjuI GAANNNNNNNTTGG 2 cut(s) 395, 427
AleI CACNNNNGTG 2 cut(s) 266, 1055
AluBI AGCT 3 cut(s) 132, 911, 1094
AluI AGCT 3 cut(s) 132, 911, 1094
Alw21I GWGCWC 2 cut(s) 310, 886
Alw26I GTCTC 4 cut(s) 229, 249, 653, 800
AlwNI CAGNNNCTG 1 cut(s) 254
Ama87I CYCGRG 1 cut(s) 204
AoxI GGCC 9 cut(s) 218, 297, 498, 528, 555, 712, 777, 900, 1031
ApeKI GCWGC 2 cut(s) 1040, 1091
AspS9I GGNCC 1 cut(s) 1032
AsuHPI GGTGA 2 cut(s) 253, 1069
AvaI CYCGRG 1 cut(s) 204
AxyI CCTNAGG 1 cut(s) 416
BalI TGGCCA 2 cut(s) 714, 902
BanI GGYRCC 1 cut(s) 116
BanII GRGCYC 2 cut(s) 205, 822
BbsI GAAGAC 1 cut(s) 250
Bbv12I GWGCWC 2 cut(s) 310, 886
BbvCI CCTCAGC 1 cut(s) 1095
BbvI GCAGC 2 cut(s) 1027, 1103
BccI CCATC 5 cut(s) 671, 755, 1009, 1123, 1159
BciT130I CCWGG 2 cut(s) 711, 899
BcoDI GTCTC 4 cut(s) 229, 249, 653, 800
BfuAI ACCTGC 1 cut(s) 1111
BisI GCNGC 3 cut(s) 1031, 1041, 1092
BlsI GCNGC 3 cut(s) 1032, 1042, 1093
BmcAI AGTACT 1 cut(s) 686
Bme1390I CCNGG 2 cut(s) 711, 899
BmeT110I CYCGRG 1 cut(s) 204
BmgBI CACGTC 1 cut(s) 94
BmgT120I GGNCC 1 cut(s) 1032
BmiI GGNNCC 1 cut(s) 118
BmrFI CCNGG 2 cut(s) 711, 899
BmsI GCATC 2 cut(s) 198, 979
BpiI GAAGAC 1 cut(s) 250
BpmI CTGGAG 3 cut(s) 231, 908, 1028
Bpu10I CCTNAGC 1 cut(s) 1095
BpuEI CTTGAG 3 cut(s) 26, 296, 563
BsaAI YACGTR 1 cut(s) 694
BsaI GGTCTC 1 cut(s) 653
BsaJI CCNNGG 5 cut(s) 531, 558, 709, 822, 876
Bsc4I CCNNNNNNNGG 2 cut(s) 126, 581
Bse118I RCCGGY 2 cut(s) 185, 284
Bse1I ACTGG 4 cut(s) 248, 343, 518, 732
Bse21I CCTNAGG 1 cut(s) 416
Bse3DI GCAATG 1 cut(s) 501
BseBI CCWGG 2 cut(s) 711, 899
BseDI CCNNGG 5 cut(s) 531, 558, 709, 822, 876
BseGI GGATG 3 cut(s) 465, 679, 778
BseLI CCNNNNNNNGG 2 cut(s) 126, 581
BseMI GCAATG 1 cut(s) 501
BseMII CTCAG 2 cut(s) 976, 1086
BseNI ACTGG 4 cut(s) 248, 343, 518, 732
BseRI GAGGAG 4 cut(s) 142, 818, 1112, 1115
BseXI GCAGC 2 cut(s) 1027, 1103
BsgI GTGCAG 1 cut(s) 1139
BshFI GGCC 9 cut(s) 220, 299, 500, 530, 557, 714, 779, 902, 1033
BshNI GGYRCC 1 cut(s) 116
BsiHKAI GWGCWC 2 cut(s) 310, 886
BsiHKCI CYCGRG 1 cut(s) 204
BsiSI CCGG 2 cut(s) 186, 285
BslFI GGGAC 1 cut(s) 972
BslI CCNNNNNNNGG 2 cut(s) 126, 581
BsmAI GTCTC 4 cut(s) 229, 249, 653, 800
BsmFI GGGAC 1 cut(s) 972
BsmI GAATGC 2 cut(s) 237, 624
BsnI GGCC 9 cut(s) 220, 299, 500, 530, 557, 714, 779, 902, 1033
Bso31I GGTCTC 1 cut(s) 653
BsoBI CYCGRG 1 cut(s) 204
Bsp1286I GDGCHC 4 cut(s) 205, 310, 822, 886
Bsp19I CCATGG 1 cut(s) 822
BspACI CCGC 5 cut(s) 5, 351, 840, 1030, 1055
BspANI GGCC 9 cut(s) 220, 299, 500, 530, 557, 714, 779, 902, 1033
BspCNI CTCAG 2 cut(s) 975, 1087
BspLI GGNNCC 1 cut(s) 118
BspMI ACCTGC 1 cut(s) 1111
BspT107I GGYRCC 1 cut(s) 116
BspTNI GGTCTC 1 cut(s) 653
BsrDI GCAATG 1 cut(s) 501
BsrFI RCCGGY 2 cut(s) 185, 284
BsrI ACTGG 4 cut(s) 248, 343, 518, 732
BssAI RCCGGY 2 cut(s) 185, 284
BssECI CCNNGG 5 cut(s) 531, 558, 709, 822, 876
BssNAI GTATAC 2 cut(s) 639, 744
BssT1I CCWWGG 4 cut(s) 531, 558, 822, 876
Bst1107I GTATAC 2 cut(s) 639, 744
Bst2UI CCWGG 2 cut(s) 711, 899
Bst4CI ACNGT 5 cut(s) 11, 86, 305, 581, 946
BstBAI YACGTR 1 cut(s) 694
BstC8I GCNNGC 4 cut(s) 355, 702, 706, 733
BstDEI CTNAG 4 cut(s) 416, 962, 982, 1095
BstDSI CCRYGG 1 cut(s) 822
BstF5I GGATG 3 cut(s) 465, 679, 778
BstMAI GTCTC 4 cut(s) 229, 249, 653, 800
BstMWI GCNNNNNNNGC 5 cut(s) 305, 608, 890, 899, 908
BstNI CCWGG 2 cut(s) 711, 899
BstNSI RCATGY 1 cut(s) 53
BstSCI CCNGG 2 cut(s) 709, 897
BstV1I GCAGC 2 cut(s) 1027, 1103
BstV2I GAAGAC 1 cut(s) 250
BstZ17I GTATAC 2 cut(s) 639, 744
Bsu36I CCTNAGG 1 cut(s) 416
BsuRI GGCC 9 cut(s) 220, 299, 500, 530, 557, 714, 779, 902, 1033
BtgI CCRYGG 1 cut(s) 822
BtrI CACGTC 1 cut(s) 94
BtsCI GGATG 3 cut(s) 465, 679, 778
BtsI GCAGTG 1 cut(s) 1050
BtsIMutI CAGTG 8 cut(s) 255, 310, 336, 525, 586, 626, 970, 1050
BveI ACCTGC 1 cut(s) 1111
Cac8I GCNNGC 4 cut(s) 355, 702, 706, 733
CaiI CAGNNNCTG 1 cut(s) 254
Cfr10I RCCGGY 2 cut(s) 185, 284
Cfr13I GGNCC 1 cut(s) 1032
Csp6I GTAC 3 cut(s) 280, 383, 685
CviAII CATG 7 cut(s) 50, 328, 568, 716, 823, 904, 1210
CviQI GTAC 3 cut(s) 280, 383, 685
DdeI CTNAG 4 cut(s) 416, 962, 982, 1095
DraI TTTAAA 1 cut(s) 1176
EaeI YGGCCR 2 cut(s) 712, 900
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 4 cut(s) 531, 558, 822, 876
Eco147I AGGCCT 1 cut(s) 220
Eco24I GRGCYC 2 cut(s) 205, 822
Eco31I GGTCTC 1 cut(s) 653
Eco57I CTGAAG 1 cut(s) 650
Eco81I CCTNAGG 1 cut(s) 416
Eco88I CYCGRG 1 cut(s) 204
EcoRII CCWGG 2 cut(s) 709, 897
EcoT14I CCWWGG 4 cut(s) 531, 558, 822, 876
EcoT38I GRGCYC 2 cut(s) 205, 822
ErhI CCWWGG 4 cut(s) 531, 558, 822, 876
FaeI CATG 7 cut(s) 53, 331, 571, 719, 826, 907, 1213
FaqI GGGAC 1 cut(s) 972
FatI CATG 7 cut(s) 49, 327, 567, 715, 822, 903, 1209
FauI CCCGC 1 cut(s) 358
FblI GTMKAC 4 cut(s) 318, 638, 743, 1183
Fnu4HI GCNGC 3 cut(s) 1031, 1041, 1092
FokI GGATG 3 cut(s) 472, 686, 785
FriOI GRGCYC 2 cut(s) 205, 822
Fsp4HI GCNGC 3 cut(s) 1031, 1041, 1092
GluI GCNGC 3 cut(s) 1031, 1041, 1092
GsuI CTGGAG 3 cut(s) 231, 908, 1028
HaeIII GGCC 9 cut(s) 220, 299, 500, 530, 557, 714, 779, 902, 1033
HapII CCGG 2 cut(s) 186, 285
Hin1II CATG 7 cut(s) 53, 331, 571, 719, 826, 907, 1213
HincII GTYRAC 1 cut(s) 346
HindII GTYRAC 1 cut(s) 346
HinfI GANTC 3 cut(s) 137, 271, 960
HpaII CCGG 2 cut(s) 186, 285
HphI GGTGA 2 cut(s) 253, 1069
Hpy166II GTNNAC 7 cut(s) 319, 346, 383, 639, 652, 744, 1184
Hpy188I TCNGA 2 cut(s) 229, 276
Hpy188III TCNNGA 6 cut(s) 43, 440, 484, 542, 575, 887
Hpy8I GTNNAC 7 cut(s) 319, 346, 383, 639, 652, 744, 1184
HpyAV CCTTC 6 cut(s) 490, 490, 520, 608, 1057, 1150
HpyCH4III ACNGT 5 cut(s) 11, 86, 305, 581, 946
HpyCH4IV ACGT 4 cut(s) 93, 366, 693, 1170
HpyCH4V TGCA 4 cut(s) 389, 622, 1073, 1120
HpyF10VI GCNNNNNNNGC 5 cut(s) 305, 608, 890, 899, 908
HpyF3I CTNAG 4 cut(s) 416, 962, 982, 1095
HpySE526I ACGT 4 cut(s) 93, 366, 693, 1170
Hsp92II CATG 7 cut(s) 53, 331, 571, 719, 826, 907, 1213
LmnI GCTCC 1 cut(s) 129
Lsp1109I GCAGC 2 cut(s) 1027, 1103
LweI GCATC 2 cut(s) 198, 979
MaeII ACGT 4 cut(s) 93, 366, 693, 1170
MboII GAAGA 3 cut(s) 18, 250, 643
MhlI GDGCHC 4 cut(s) 205, 310, 822, 886
MlsI TGGCCA 2 cut(s) 714, 902
MluCI AATT 3 cut(s) 13, 22, 169
MluNI TGGCCA 2 cut(s) 714, 902
MlyI GAGTC 1 cut(s) 954
MmeI TCCRAC 1 cut(s) 429
Mox20I TGGCCA 2 cut(s) 714, 902
MscI TGGCCA 2 cut(s) 714, 902
MseI TTAA 4 cut(s) 144, 792, 950, 1175
MslI CAYNNNNRTG 2 cut(s) 266, 1055
Msp20I TGGCCA 2 cut(s) 714, 902
MspA1I CMGCKG 2 cut(s) 842, 1094
MspI CCGG 2 cut(s) 186, 285
MspR9I CCNGG 2 cut(s) 711, 899
Mva1269I GAATGC 2 cut(s) 237, 624
MvaI CCWGG 2 cut(s) 711, 899
MwoI GCNNNNNNNGC 5 cut(s) 305, 608, 890, 899, 908
NcoI CCATGG 1 cut(s) 822
NlaIII CATG 7 cut(s) 53, 331, 571, 719, 826, 907, 1213
NlaIV GGNNCC 1 cut(s) 118
NspI RCATGY 1 cut(s) 53
OliI CACNNNNGTG 2 cut(s) 266, 1055
PceI AGGCCT 1 cut(s) 220
PciI ACATGT 1 cut(s) 49
PctI GAATGC 2 cut(s) 237, 624
PfeI GAWTC 2 cut(s) 137, 271
PkrI GCNGC 3 cut(s) 1032, 1042, 1093
PleI GAGTC 1 cut(s) 954
PpsI GAGTC 1 cut(s) 954
Ppu21I YACGTR 1 cut(s) 694
PscI ACATGT 1 cut(s) 49
Psp6I CCWGG 2 cut(s) 709, 897
PspGI CCWGG 2 cut(s) 709, 897
PspN4I GGNNCC 1 cut(s) 118
PspPI GGNCC 1 cut(s) 1032
PstNI CAGNNNCTG 1 cut(s) 254
PvuII CAGCTG 1 cut(s) 1094
RsaI GTAC 3 cut(s) 281, 384, 686
RsaNI GTAC 3 cut(s) 280, 383, 685
RseI CAYNNNNRTG 2 cut(s) 266, 1055
SaqAI TTAA 4 cut(s) 144, 792, 950, 1175
SatI GCNGC 3 cut(s) 1031, 1041, 1092
Sau96I GGNCC 1 cut(s) 1032
ScaI AGTACT 1 cut(s) 686
SchI GAGTC 1 cut(s) 954
ScrFI CCNGG 2 cut(s) 711, 899
SduI GDGCHC 4 cut(s) 205, 310, 822, 886
SfaNI GCATC 2 cut(s) 198, 979
SmiMI CAYNNNNRTG 2 cut(s) 266, 1055
SmlI CTYRAG 3 cut(s) 41, 311, 542
SmoI CTYRAG 3 cut(s) 41, 311, 542
Sse9I AATT 3 cut(s) 13, 22, 169
SseBI AGGCCT 1 cut(s) 220
SsiI CCGC 5 cut(s) 5, 351, 840, 1030, 1055
SspI AATATT 2 cut(s) 111, 1216
StuI AGGCCT 1 cut(s) 220
StyD4I CCNGG 2 cut(s) 709, 897
StyI CCWWGG 4 cut(s) 531, 558, 822, 876
TaaI ACNGT 5 cut(s) 11, 86, 305, 581, 946
TaiI ACGT 4 cut(s) 96, 369, 696, 1173
TaqI TCGA 3 cut(s) 155, 666, 849
TasI AATT 3 cut(s) 13, 22, 169
TatI WGTACW 2 cut(s) 382, 684
TauI GCSGC 1 cut(s) 1033
TfiI GAWTC 2 cut(s) 137, 271
Tru1I TTAA 4 cut(s) 144, 792, 950, 1175
Tru9I TTAA 4 cut(s) 144, 792, 950, 1175
TscAI CASTG 8 cut(s) 255, 310, 343, 525, 586, 633, 970, 1057
TseI GCWGC 2 cut(s) 1040, 1091
TspDTI ATGAA 4 cut(s) 476, 509, 556, 1226
TspRI CASTG 8 cut(s) 255, 310, 343, 525, 586, 633, 970, 1057
XceI RCATGY 1 cut(s) 53
XcmI CCANNNNNNNNNTGG 1 cut(s) 883
XmiI GTMKAC 4 cut(s) 318, 638, 743, 1183
ZrmI AGTACT 1 cut(s) 686
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.