RCHIOBHM_CHR0C11G0499411

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: Sequence Only
Biological Identity
rosa_chinensis
Unknown
OG0000101
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1041 bp
ATGAAGGTTTTCAAGGATGCGACCAAAGACTGTGAGGACAAGGTCTTGAAAAAAATGTTTGATTCCATTGGCGACTATGACTTCCTTAACAGCTATGCCTTTCATGTCTTCAGAACATTGGCAAATTCCGGCATCCCTGAGGAAGCCAAAGAGCTCTTTAAGCCTTGCTCTGAGTTGGCTGTACTGCCTGACGTGGCCACCTTCACCATTGTCATTTGGGACTATGCCAATGCCGGCAAGACCAACGCTGCTCACAAGGTCTACCAGCAAATGATAGCCGCCGGTGTCGCCCCCACCTCCTGCACTTACTCTATACTCATCACGGCACTTGCAACAGACTCGTCTTCTGATGTCAATTTTGTTGGGTATGCCAAGAAGTACTTTTTGGAAATGTTGGATAAGGGGATGAAGCCCCATTCTGCCTCCTGCATGACTGTTGTCGACGCCATTGCCTGCCGGGAGTCAGTGGAGAAGGTCAGGGAGTTCCTTGAGCAGATACAAGCAAAGGGGTTCATCCCTGAGTCCAAAATTTTTCAGCTTGGAGAAACCCACCTTGAAGAAGCAATGAAAAAAATGAAGATGAATGATGATCTCATCACCAATACCACTGACAAGGATGTGCAAAAAGTATTCCGCACGTGGAACACCAAGCCGGATTGCCTCTACAAAAAGGCGTTGAAGATGTACAAGGCTTTGATTGAGGATGGCAATGCAGAACAGACCATGGAGCTTTATAAGCGCGTTGTTGAGATGTGTATGCAGCCCATGGTTGTGGTGCACACCTCTGTTATTGAAGCCTATCTCAAGTTTGGCAAGACCAAGGGTGCTCTGGAGGCATACTACGGCATGTTAGCTGCTGGGGTTGCCCCAAACTCCTACACTTACACTGTTCTAATCAAGGGACTCACTGCTAACCCCAACTTCTCTGGAGATGCCAAGAAGTGCTTGCTTGAGATGATGGACAAGGGGATGAGGTCTAATGCTGCCACCTACACTGCTGTGATAGAGAGCTTTGCAAAGCTAGAGGATGAGGCTTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

346

Amino Acids

38.63

Weight (kDa)

6.05

Isoelectric Point (pI)

30.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 735
AccI GTMKAC 2 cut(s) 261, 441
AccII CGCG 1 cut(s) 741
AciI CCGC 2 cut(s) 279, 634
AcoI YGGCCR 1 cut(s) 195
AcsI RAATTY 2 cut(s) 124, 528
AcuI CTGAAG 1 cut(s) 94
AcvI CACGTG 1 cut(s) 639
AcyI GRCGYC 1 cut(s) 444
AfaI GTAC 3 cut(s) 183, 380, 686
AgsI TTSAA 5 cut(s) 13, 49, 557, 679, 794
AjiI CACGTC 1 cut(s) 193
AjuI GAANNNNNNNTTGG 2 cut(s) 368, 400
AleI CACNNNNGTG 1 cut(s) 998
AluBI AGCT 7 cut(s) 93, 154, 538, 730, 854, 1011, 1021
AluI AGCT 7 cut(s) 93, 154, 538, 730, 854, 1011, 1021
Alw21I GWGCWC 3 cut(s) 156, 780, 829
Alw44I GTGCAC 1 cut(s) 776
AoxI GGCC 1 cut(s) 195
ApaLI GTGCAC 1 cut(s) 776
ApeKI GCWGC 4 cut(s) 248, 760, 854, 983
ApoI RAATTY 2 cut(s) 124, 528
Asp700I GAANNNNTTC 1 cut(s) 8
AspLEI GCGC 1 cut(s) 741
AsuC2I CCSGG 1 cut(s) 458
AsuHPI GGTGA 2 cut(s) 196, 589
AxyI CCTNAGG 1 cut(s) 138
BaeGI GKGCMC 1 cut(s) 780
BalI TGGCCA 1 cut(s) 197
BanII GRGCYC 1 cut(s) 156
BbrPI CACGTG 1 cut(s) 639
BbsI GAAGAC 2 cut(s) 100, 336
Bbv12I GWGCWC 3 cut(s) 156, 780, 829
BbvI GCAGC 4 cut(s) 235, 772, 841, 970
BccI CCATC 2 cut(s) 698, 952
BceAI ACGGC 2 cut(s) 339, 859
BcgI CGANNNNNNTGC 4 cut(s) 321, 355, 431, 465
BcnI CCSGG 1 cut(s) 458
BfaI CTAG 1 cut(s) 1022
BisI GCNGC 5 cut(s) 249, 279, 761, 855, 984
BlsI GCNGC 5 cut(s) 250, 280, 762, 856, 985
BmcAI AGTACT 1 cut(s) 380
Bme1390I CCNGG 1 cut(s) 458
BmgBI CACGTC 1 cut(s) 193
BmrFI CCNGG 1 cut(s) 458
BmsI GCATC 3 cut(s) 7, 141, 922
BoxI GACNNNNGTC 1 cut(s) 437
BpiI GAAGAC 2 cut(s) 100, 336
BpmI CTGGAG 2 cut(s) 851, 948
BpuEI CTTGAG 3 cut(s) 509, 788, 971
BpuMI CCSGG 1 cut(s) 458
BsaAI YACGTR 1 cut(s) 639
BsaHI GRCGYC 1 cut(s) 444
BsaJI CCNNGG 3 cut(s) 723, 765, 819
Bse118I RCCGGY 2 cut(s) 233, 281
Bse21I CCTNAGG 1 cut(s) 138
Bse3DI GCAATG 3 cut(s) 447, 570, 715
BseDI CCNNGG 3 cut(s) 723, 765, 819
BseGI GGATG 8 cut(s) 22, 132, 411, 513, 622, 709, 975, 1033
BseMI GCAATG 3 cut(s) 447, 570, 715
BseMII CTCAG 3 cut(s) 129, 162, 510
BseSI GKGCMC 1 cut(s) 780
BseXI GCAGC 4 cut(s) 235, 772, 841, 970
BseYI CCCAGC 1 cut(s) 857
BsgI GTGCAG 1 cut(s) 286
Bsh1236I CGCG 1 cut(s) 741
BshFI GGCC 1 cut(s) 197
BsiHKAI GWGCWC 3 cut(s) 156, 780, 829
BsiSI CCGG 5 cut(s) 129, 234, 282, 457, 653
BslFI GGGAC 2 cut(s) 233, 915
BsmFI GGGAC 2 cut(s) 233, 915
BsnI GGCC 1 cut(s) 197
Bsp1286I GDGCHC 3 cut(s) 156, 780, 829
Bsp1407I TGTACA 1 cut(s) 684
Bsp143I GATC 1 cut(s) 589
Bsp19I CCATGG 2 cut(s) 723, 765
BspACI CCGC 2 cut(s) 279, 634
BspANI GGCC 1 cut(s) 197
BspCNI CTCAG 3 cut(s) 130, 163, 511
BspFNI CGCG 1 cut(s) 741
BsrDI GCAATG 3 cut(s) 447, 570, 715
BsrFI RCCGGY 2 cut(s) 233, 281
BsrGI TGTACA 1 cut(s) 684
BssAI RCCGGY 2 cut(s) 233, 281
BssECI CCNNGG 3 cut(s) 723, 765, 819
BssMI GATC 1 cut(s) 589
BssNI GRCGYC 1 cut(s) 444
BssT1I CCWWGG 3 cut(s) 723, 765, 819
Bst4CI ACNGT 3 cut(s) 32, 436, 889
BstACI GRCGYC 1 cut(s) 444
BstAUI TGTACA 1 cut(s) 684
BstBAI YACGTR 1 cut(s) 639
BstC8I GCNNGC 3 cut(s) 235, 454, 947
BstDEI CTNAG 4 cut(s) 138, 171, 519, 1038
BstDSI CCRYGG 2 cut(s) 723, 765
BstF5I GGATG 8 cut(s) 22, 132, 411, 513, 622, 709, 975, 1033
BstFNI CGCG 1 cut(s) 741
BstHHI GCGC 1 cut(s) 741
BstKTI GATC 1 cut(s) 592
BstMBI GATC 1 cut(s) 589
BstMWI GCNNNNNNNGC 5 cut(s) 160, 287, 736, 833, 863
BstNSI RCATGY 1 cut(s) 850
BstPAI GACNNNNGTC 1 cut(s) 437
BstSCI CCNGG 1 cut(s) 456
BstSLI GKGCMC 1 cut(s) 780
BstUI CGCG 1 cut(s) 741
BstV1I GCAGC 4 cut(s) 235, 772, 841, 970
BstV2I GAAGAC 2 cut(s) 100, 336
BstXI CCANNNNNNTGG 1 cut(s) 772
Bsu36I CCTNAGG 1 cut(s) 138
BsuRI GGCC 1 cut(s) 197
BtgI CCRYGG 2 cut(s) 723, 765
BtrI CACGTC 1 cut(s) 193
BtsCI GGATG 8 cut(s) 22, 132, 411, 513, 622, 709, 975, 1033
BtsI GCAGTG 2 cut(s) 906, 993
BtsIMutI CAGTG 5 cut(s) 471, 606, 885, 906, 993
Cac8I GCNNGC 3 cut(s) 235, 454, 947
CfoI GCGC 1 cut(s) 741
Cfr10I RCCGGY 2 cut(s) 233, 281
CseI GACGC 1 cut(s) 452
Csp6I GTAC 3 cut(s) 182, 379, 685
CviAII CATG 5 cut(s) 104, 430, 724, 766, 847
CviQI GTAC 3 cut(s) 182, 379, 685
DdeI CTNAG 4 cut(s) 138, 171, 519, 1038
DpnI GATC 1 cut(s) 591
DpnII GATC 1 cut(s) 589
EaeI YGGCCR 1 cut(s) 195
Ecl136II GAGCTC 1 cut(s) 154
Eco130I CCWWGG 3 cut(s) 723, 765, 819
Eco24I GRGCYC 1 cut(s) 156
Eco53kI GAGCTC 1 cut(s) 154
Eco57I CTGAAG 1 cut(s) 94
Eco72I CACGTG 1 cut(s) 639
Eco81I CCTNAGG 1 cut(s) 138
EcoICRI GAGCTC 1 cut(s) 154
EcoT14I CCWWGG 3 cut(s) 723, 765, 819
EcoT38I GRGCYC 1 cut(s) 156
ErhI CCWWGG 3 cut(s) 723, 765, 819
FaeI CATG 5 cut(s) 107, 433, 727, 769, 850
FalI AAGNNNNNCTT 4 cut(s) 365, 397, 929, 961
FaqI GGGAC 2 cut(s) 233, 915
FatI CATG 5 cut(s) 103, 429, 723, 765, 846
FblI GTMKAC 2 cut(s) 261, 441
Fnu4HI GCNGC 5 cut(s) 249, 279, 761, 855, 984
FokI GGATG 7 cut(s) 29, 119, 418, 500, 629, 716, 982
FriOI GRGCYC 1 cut(s) 156
Fsp4HI GCNGC 5 cut(s) 249, 279, 761, 855, 984
FspBI CTAG 1 cut(s) 1022
GlaI GCGC 1 cut(s) 740
GluI GCNGC 5 cut(s) 249, 279, 761, 855, 984
GsaI CCCAGC 1 cut(s) 861
GsuI CTGGAG 2 cut(s) 851, 948
HaeIII GGCC 1 cut(s) 197
HapII CCGG 5 cut(s) 129, 234, 282, 457, 653
HgaI GACGC 1 cut(s) 452
HhaI GCGC 1 cut(s) 741
Hin1I GRCGYC 1 cut(s) 444
Hin1II CATG 5 cut(s) 107, 433, 727, 769, 850
Hin6I GCGC 1 cut(s) 739
HinP1I GCGC 1 cut(s) 739
HincII GTYRAC 1 cut(s) 442
HindII GTYRAC 1 cut(s) 442
HinfI GANTC 5 cut(s) 62, 338, 461, 521, 903
HpaII CCGG 5 cut(s) 129, 234, 282, 457, 653
HphI GGTGA 2 cut(s) 196, 589
Hpy166II GTNNAC 3 cut(s) 262, 442, 778
Hpy188I TCNGA 3 cut(s) 113, 172, 349
Hpy188III TCNNGA 3 cut(s) 46, 830, 927
Hpy8I GTNNAC 3 cut(s) 262, 442, 778
Hpy99I CGWCG 1 cut(s) 446
HpyAV CCTTC 2 cut(s) 211, 466
HpyCH4III ACNGT 3 cut(s) 32, 436, 889
HpyCH4IV ACGT 2 cut(s) 192, 638
HpyCH4V TGCA 8 cut(s) 303, 332, 429, 622, 713, 760, 778, 1016
HpyF10VI GCNNNNNNNGC 5 cut(s) 160, 287, 736, 833, 863
HpyF3I CTNAG 4 cut(s) 138, 171, 519, 1038
HpySE526I ACGT 2 cut(s) 192, 638
Hsp92I GRCGYC 1 cut(s) 444
Hsp92II CATG 5 cut(s) 107, 433, 727, 769, 850
HspAI GCGC 1 cut(s) 739
KroI GCCGGC 1 cut(s) 233
KroNI GCCGGC 1 cut(s) 235
Kzo9I GATC 1 cut(s) 589
LmnI GCTCC 1 cut(s) 727
Lsp1109I GCAGC 4 cut(s) 235, 772, 841, 970
LweI GCATC 3 cut(s) 7, 141, 922
MaeI CTAG 1 cut(s) 1022
MaeII ACGT 2 cut(s) 192, 638
MalI GATC 1 cut(s) 591
MboI GATC 1 cut(s) 589
MboII GAAGA 5 cut(s) 100, 336, 569, 589, 691
MhlI GDGCHC 3 cut(s) 156, 780, 829
MlsI TGGCCA 1 cut(s) 197
MluCI AATT 3 cut(s) 124, 355, 528
MluNI TGGCCA 1 cut(s) 197
MlyI GAGTC 4 cut(s) 332, 470, 530, 897
MmeI TCCRAC 1 cut(s) 375
Mox20I TGGCCA 1 cut(s) 197
MroNI GCCGGC 1 cut(s) 233
MroXI GAANNNNTTC 1 cut(s) 8
MscI TGGCCA 1 cut(s) 197
MseI TTAA 2 cut(s) 87, 159
MslI CAYNNNNRTG 2 cut(s) 770, 998
Msp20I TGGCCA 1 cut(s) 197
MspI CCGG 5 cut(s) 129, 234, 282, 457, 653
MspR9I CCNGG 1 cut(s) 458
MvnI CGCG 1 cut(s) 741
MwoI GCNNNNNNNGC 5 cut(s) 160, 287, 736, 833, 863
NaeI GCCGGC 1 cut(s) 235
NciI CCSGG 1 cut(s) 458
NcoI CCATGG 2 cut(s) 723, 765
NdeII GATC 1 cut(s) 589
NgoMIV GCCGGC 1 cut(s) 233
NlaIII CATG 5 cut(s) 107, 433, 727, 769, 850
NspI RCATGY 1 cut(s) 850
OliI CACNNNNGTG 1 cut(s) 998
PdiI GCCGGC 1 cut(s) 235
PdmI GAANNNNTTC 1 cut(s) 8
PfeI GAWTC 1 cut(s) 62
PflFI GACNNNGTC 1 cut(s) 41
PkrI GCNGC 5 cut(s) 250, 280, 762, 856, 985
PleI GAGTC 4 cut(s) 332, 469, 529, 897
PmaCI CACGTG 1 cut(s) 639
PmlI CACGTG 1 cut(s) 639
PpsI GAGTC 4 cut(s) 332, 469, 529, 897
Ppu21I YACGTR 1 cut(s) 639
PshAI GACNNNNGTC 1 cut(s) 437
PsiI TTATAA 1 cut(s) 735
Psp124BI GAGCTC 1 cut(s) 156
PspCI CACGTG 1 cut(s) 639
PspFI CCCAGC 1 cut(s) 857
PsyI GACNNNGTC 1 cut(s) 41
RsaI GTAC 3 cut(s) 183, 380, 686
RsaNI GTAC 3 cut(s) 182, 379, 685
RseI CAYNNNNRTG 2 cut(s) 770, 998
SacI GAGCTC 1 cut(s) 156
SalI GTCGAC 1 cut(s) 440
SaqAI TTAA 2 cut(s) 87, 159
SatI GCNGC 5 cut(s) 249, 279, 761, 855, 984
Sau3AI GATC 1 cut(s) 589
ScaI AGTACT 1 cut(s) 380
SchI GAGTC 4 cut(s) 332, 470, 530, 897
ScrFI CCNGG 1 cut(s) 458
SduI GDGCHC 3 cut(s) 156, 780, 829
SfaNI GCATC 3 cut(s) 7, 141, 922
SgrAI CRCCGGYG 1 cut(s) 281
SmiMI CAYNNNNRTG 2 cut(s) 770, 998
SmlI CTYRAG 3 cut(s) 488, 803, 950
SmoI CTYRAG 3 cut(s) 488, 803, 950
Sse9I AATT 3 cut(s) 124, 355, 528
SsiI CCGC 2 cut(s) 279, 634
SspMI CTAG 1 cut(s) 1022
SstI GAGCTC 1 cut(s) 156
StyD4I CCNGG 1 cut(s) 456
StyI CCWWGG 3 cut(s) 723, 765, 819
TaaI ACNGT 3 cut(s) 32, 436, 889
TaiI ACGT 2 cut(s) 195, 641
TaqI TCGA 1 cut(s) 441
TasI AATT 3 cut(s) 124, 355, 528
TatI WGTACW 3 cut(s) 181, 378, 684
TauI GCSGC 1 cut(s) 281
TfiI GAWTC 1 cut(s) 62
Tru1I TTAA 2 cut(s) 87, 159
Tru9I TTAA 2 cut(s) 87, 159
TscAI CASTG 5 cut(s) 471, 613, 892, 913, 1000
TseI GCWGC 4 cut(s) 248, 760, 854, 983
TspDTI ATGAA 7 cut(s) 17, 92, 422, 502, 581, 590, 596
TspRI CASTG 5 cut(s) 471, 613, 892, 913, 1000
Tth111I GACNNNGTC 1 cut(s) 41
VneI GTGCAC 1 cut(s) 776
XapI RAATTY 2 cut(s) 124, 528
XceI RCATGY 1 cut(s) 850
XcmI CCANNNNNNNNNTGG 1 cut(s) 826
XmiI GTMKAC 2 cut(s) 261, 441
XmnI GAANNNNTTC 1 cut(s) 8
XspI CTAG 1 cut(s) 1022
ZrmI AGTACT 1 cut(s) 380
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.