Pentatricopeptide repeat-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 89 |
| AgsI | TTSAA | 2 cut(s) | 44, 427 |
| AleI | CACNNNNGTG | 1 cut(s) | 248 |
| AluBI | AGCT | 3 cut(s) | 104, 261, 386 |
| AluI | AGCT | 3 cut(s) | 104, 261, 386 |
| Alw21I | GWGCWC | 1 cut(s) | 79 |
| AoxI | GGCC | 1 cut(s) | 224 |
| ApeKI | GCWGC | 3 cut(s) | 10, 104, 233 |
| AsuHPI | GGTGA | 1 cut(s) | 328 |
| Bbv12I | GWGCWC | 1 cut(s) | 79 |
| BbvI | GCAGC | 3 cut(s) | 22, 91, 220 |
| BccI | CCATC | 2 cut(s) | 202, 352 |
| BceAI | ACGGC | 1 cut(s) | 109 |
| BisI | GCNGC | 3 cut(s) | 11, 105, 234 |
| BlsI | GCNGC | 3 cut(s) | 12, 106, 235 |
| BmsI | GCATC | 1 cut(s) | 172 |
| BpmI | CTGGAG | 2 cut(s) | 101, 198 |
| BpuEI | CTTGAG | 2 cut(s) | 38, 221 |
| BsaJI | CCNNGG | 2 cut(s) | 15, 69 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 305, 335 |
| BseDI | CCNNGG | 2 cut(s) | 15, 69 |
| BseGI | GGATG | 2 cut(s) | 225, 283 |
| BseRI | GAGGAG | 2 cut(s) | 305, 308 |
| BseXI | GCAGC | 3 cut(s) | 22, 91, 220 |
| BseYI | CCCAGC | 1 cut(s) | 107 |
| BshFI | GGCC | 1 cut(s) | 226 |
| BsiHKAI | GWGCWC | 1 cut(s) | 79 |
| BslFI | GGGAC | 1 cut(s) | 165 |
| BsmFI | GGGAC | 1 cut(s) | 165 |
| BsnI | GGCC | 1 cut(s) | 226 |
| Bsp1286I | GDGCHC | 1 cut(s) | 79 |
| Bsp19I | CCATGG | 1 cut(s) | 15 |
| BspANI | GGCC | 1 cut(s) | 226 |
| BspHI | TCATGA | 1 cut(s) | 402 |
| BssECI | CCNNGG | 2 cut(s) | 15, 69 |
| BssT1I | CCWWGG | 2 cut(s) | 15, 69 |
| Bst4CI | ACNGT | 1 cut(s) | 139 |
| BstC8I | GCNNGC | 1 cut(s) | 197 |
| BstDSI | CCRYGG | 1 cut(s) | 15 |
| BstF5I | GGATG | 2 cut(s) | 225, 283 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 83, 113 |
| BstNSI | RCATGY | 1 cut(s) | 100 |
| BstV1I | GCAGC | 3 cut(s) | 22, 91, 220 |
| BsuRI | GGCC | 1 cut(s) | 226 |
| BtgI | CCRYGG | 1 cut(s) | 15 |
| BtsCI | GGATG | 2 cut(s) | 225, 283 |
| BtsI | GCAGTG | 2 cut(s) | 156, 243 |
| BtsIMutI | CAGTG | 3 cut(s) | 135, 156, 243 |
| Cac8I | GCNNGC | 1 cut(s) | 197 |
| CciI | TCATGA | 1 cut(s) | 402 |
| Csp6I | GTAC | 1 cut(s) | 88 |
| CviAII | CATG | 3 cut(s) | 16, 97, 403 |
| CviJI | RGCY | 8 cut(s) | 13, 47, 104, 226, 261, 353, 386, 432 |
| CviKI_1 | RGCY | 8 cut(s) | 13, 47, 104, 226, 261, 353, 386, 432 |
| CviQI | GTAC | 1 cut(s) | 88 |
| Eco130I | CCWWGG | 2 cut(s) | 15, 69 |
| Eco147I | AGGCCT | 1 cut(s) | 226 |
| EcoT14I | CCWWGG | 2 cut(s) | 15, 69 |
| ErhI | CCWWGG | 2 cut(s) | 15, 69 |
| FaeI | CATG | 3 cut(s) | 19, 100, 406 |
| FaiI | YATR | 5 cut(s) | 8, 17, 98, 356, 404 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 179, 211 |
| FaqI | GGGAC | 1 cut(s) | 165 |
| FatI | CATG | 3 cut(s) | 15, 96, 402 |
| Fnu4HI | GCNGC | 3 cut(s) | 11, 105, 234 |
| FokI | GGATG | 2 cut(s) | 232, 290 |
| Fsp4HI | GCNGC | 3 cut(s) | 11, 105, 234 |
| GluI | GCNGC | 3 cut(s) | 11, 105, 234 |
| GsaI | CCCAGC | 1 cut(s) | 111 |
| GsuI | CTGGAG | 2 cut(s) | 101, 198 |
| HaeIII | GGCC | 1 cut(s) | 226 |
| Hin1II | CATG | 3 cut(s) | 19, 100, 406 |
| HinfI | GANTC | 1 cut(s) | 153 |
| HphI | GGTGA | 1 cut(s) | 328 |
| Hpy166II | GTNNAC | 1 cut(s) | 28 |
| Hpy188III | TCNNGA | 3 cut(s) | 80, 177, 403 |
| Hpy8I | GTNNAC | 1 cut(s) | 28 |
| HpyAV | CCTTC | 1 cut(s) | 421 |
| HpyCH4III | ACNGT | 1 cut(s) | 139 |
| HpyCH4V | TGCA | 4 cut(s) | 10, 266, 300, 347 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 83, 113 |
| Hsp92II | CATG | 3 cut(s) | 19, 100, 406 |
| LpnPI | CCDG | 3 cut(s) | 65, 93, 162 |
| Lsp1109I | GCAGC | 3 cut(s) | 22, 91, 220 |
| LweI | GCATC | 1 cut(s) | 172 |
| MhlI | GDGCHC | 1 cut(s) | 79 |
| MlyI | GAGTC | 1 cut(s) | 147 |
| MseI | TTAA | 1 cut(s) | 143 |
| MslI | CAYNNNNRTG | 1 cut(s) | 248 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 83, 113 |
| NcoI | CCATGG | 1 cut(s) | 15 |
| NlaIII | CATG | 3 cut(s) | 19, 100, 406 |
| NspI | RCATGY | 1 cut(s) | 100 |
| OliI | CACNNNNGTG | 1 cut(s) | 248 |
| PagI | TCATGA | 1 cut(s) | 402 |
| PceI | AGGCCT | 1 cut(s) | 226 |
| PkrI | GCNGC | 3 cut(s) | 12, 106, 235 |
| PleI | GAGTC | 1 cut(s) | 147 |
| PpsI | GAGTC | 1 cut(s) | 147 |
| PspFI | CCCAGC | 1 cut(s) | 107 |
| RsaI | GTAC | 1 cut(s) | 89 |
| RsaNI | GTAC | 1 cut(s) | 88 |
| RseI | CAYNNNNRTG | 1 cut(s) | 248 |
| SaqAI | TTAA | 1 cut(s) | 143 |
| SatI | GCNGC | 3 cut(s) | 11, 105, 234 |
| SchI | GAGTC | 1 cut(s) | 147 |
| SduI | GDGCHC | 1 cut(s) | 79 |
| SetI | ASST | 8 cut(s) | 35, 106, 242, 263, 318, 335, 366, 388 |
| SfaNI | GCATC | 1 cut(s) | 172 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 248 |
| SmlI | CTYRAG | 2 cut(s) | 53, 200 |
| SmoI | CTYRAG | 2 cut(s) | 53, 200 |
| SseBI | AGGCCT | 1 cut(s) | 226 |
| StuI | AGGCCT | 1 cut(s) | 226 |
| StyI | CCWWGG | 2 cut(s) | 15, 69 |
| TaaI | ACNGT | 1 cut(s) | 139 |
| Tru1I | TTAA | 1 cut(s) | 143 |
| Tru9I | TTAA | 1 cut(s) | 143 |
| TscAI | CASTG | 3 cut(s) | 142, 163, 250 |
| TseI | GCWGC | 3 cut(s) | 10, 104, 233 |
| TspDTI | ATGAA | 1 cut(s) | 419 |
| TspGWI | ACGGA | 1 cut(s) | 25 |
| TspRI | CASTG | 3 cut(s) | 142, 163, 250 |
| XceI | RCATGY | 1 cut(s) | 100 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 76 |