RchiOBHm_Chr0c11g0499461

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: Sequence Only
Biological Identity
rosa_chinensis
Unknown
OG0000101
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1164 bp
ATGACTGTGATCGAGGACATTTTCTTGAAAAAACAGTTTGAGATGCTTGGTGACTATGGCTCCCTTAACAATTATGCGATTTTGGTGTTCGATTCTATGGCGAATTCCGGCATGCCTGACGAAGCCAAAGAGCTCTTTAAGCCTCGCTCTGAGTTGGCCGTGCTGCCTGATGTGGCTGTCTTCACCATTGTCATTCGATGCTATGCCTATGCTGGAAAGACCAAGGCTGCTCTCAGGGTGTACCACCACATGTTAGCCAGTGGTGTCGCCCCCGCCTCGGTTACTTACTCTATACTCATCACGGCACTTGCAAAAGACTCACCTTCTGATGTCACTTTCGTTGGGTATGCCAAGAAGTACTTTTTGGAAATGTTGGATAAGGGAATGAAGCCCCATTCTGCCTCCTACACGACTGTGTTCGACGCCATTGCCTGCCGGGAGTCAGTGGAGAAGGCCAGGGAGTTCCTTGAGCAGATACAAGCAAAGGGGTTTGTCCCTGAGTCCAAAATTTTTCAGTTTGAAGAAACCCACCTTGCAGAAGCAATGAAGGGAATGAAGATGTATGATGATCTTGTCAACAATACCACCGACAAGAATGTGCAAAAAGTATTCCGCACGTGGCGCACCAAGCCGGGTTGCCTCTACAAAAAGTCGTTGAAGATGTACAAGGCTTTGATTGAGGATGGCAGTGCAGACCAGGCCATGGAGCTTTATAAGCGCGTTGTTGAGATGGGTATACAGCCCATGGTTGTAGTCCACACCTCCGTTATTGAAGCCTATCTCAAGTTTGGCAAGACCAAGGGTGCTCTGGGGGCGTACTGGGACATGTTAGCTGCTGGGGTTGCCCCAAACTCCTACACTTACACTATTTTAATCAAGGGACTCACTGCTGACCCCAACTTCTCTGGAGATGCCAAGAAGTGCTTGCTTGAGATGATGGACAAGGGGATGAGGCCTAATGCTGCTACCTACACTGCTGTGATAGAGAGCTTTGCAAAGCAAGAGGATGAGGCATCTGAGAAGGAGTGCAAAGAGTTGGTGGAGGTGATGATGGGTAAGGGGTTTGTGCCAAACGCAAAGGCTATGATGGAGGTTCTAAAGGGAAGGCCAACACCAGTAATAAGAAGGGTCATGAACATTGTTCTTTCCAAGTTGAAGGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

387

Amino Acids

43.16

Weight (kDa)

8.66

Isoelectric Point (pI)

35.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 55 - 103 1.4e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 56 - 105 3.7e-12 PPR repeat family
TPR_24 PF23276 229 - 336 1.4e-06 Fungal tetratrico peptide repeats
PPR_2 PF13041 249 - 295 3.4e-11 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 714
AccB7I CCANNNNNTGG 1 cut(s) 703
AccI GTMKAC 1 cut(s) 736
AccII CGCG 1 cut(s) 720
AciI CCGC 2 cut(s) 273, 613
AcoI YGGCCR 1 cut(s) 156
AcsI RAATTY 2 cut(s) 103, 507
AcvI CACGTG 1 cut(s) 618
AcyI GRCGYC 1 cut(s) 423
AfaI GTAC 4 cut(s) 242, 359, 665, 818
AfiI CCNNNNNNNGG 2 cut(s) 277, 703
AflIII ACRYGT 2 cut(s) 249, 825
AgsI TTSAA 5 cut(s) 28, 521, 658, 773, 1156
AjnI CCWGG 2 cut(s) 455, 696
AjuI GAANNNNNNNTTGG 2 cut(s) 347, 379
AleI CACNNNNGTG 2 cut(s) 413, 977
AluBI AGCT 4 cut(s) 133, 709, 833, 990
AluI AGCT 4 cut(s) 133, 709, 833, 990
Alw21I GWGCWC 2 cut(s) 135, 808
AoxI GGCC 5 cut(s) 156, 453, 699, 953, 1106
ApeKI GCWGC 4 cut(s) 163, 227, 833, 962
ApoI RAATTY 2 cut(s) 103, 507
AspLEI GCGC 2 cut(s) 624, 720
AsuC2I CCSGG 2 cut(s) 437, 633
AsuHPI GGTGA 4 cut(s) 62, 175, 312, 1057
BanII GRGCYC 1 cut(s) 135
BbrPI CACGTG 1 cut(s) 618
BbsI GAAGAC 1 cut(s) 172
Bbv12I GWGCWC 2 cut(s) 135, 808
BbvI GCAGC 4 cut(s) 150, 214, 820, 949
BccI CCATC 5 cut(s) 677, 724, 931, 1045, 1081
BceAI ACGGC 2 cut(s) 143, 318
BcgI CGANNNNNNTGC 2 cut(s) 410, 444
BciT130I CCWGG 2 cut(s) 457, 698
BcnI CCSGG 2 cut(s) 437, 633
BisI GCNGC 4 cut(s) 164, 228, 834, 963
BlsI GCNGC 4 cut(s) 165, 229, 835, 964
BmcAI AGTACT 1 cut(s) 359
Bme1390I CCNGG 4 cut(s) 437, 457, 633, 698
BmiI GGNNCC 1 cut(s) 61
BmrFI CCNGG 4 cut(s) 437, 457, 633, 698
BmrI ACTGGG 1 cut(s) 829
BmsI GCATC 4 cut(s) 33, 188, 901, 1022
BmuI ACTGGG 1 cut(s) 829
BpiI GAAGAC 1 cut(s) 172
BpmI CTGGAG 1 cut(s) 927
BpuEI CTTGAG 3 cut(s) 488, 767, 950
BpuMI CCSGG 2 cut(s) 437, 633
BsaAI YACGTR 1 cut(s) 618
BsaHI GRCGYC 1 cut(s) 423
BsaJI CCNNGG 6 cut(s) 222, 276, 456, 702, 744, 798
BsaXI ACNNNNNCTCC 2 cut(s) 44, 74
Bsc4I CCNNNNNNNGG 2 cut(s) 277, 703
Bse1I ACTGG 3 cut(s) 258, 824, 1115
Bse3DI GCAATG 2 cut(s) 426, 549
BseBI CCWGG 2 cut(s) 457, 698
BseDI CCNNGG 6 cut(s) 222, 276, 456, 702, 744, 798
BseGI GGATG 3 cut(s) 688, 954, 1012
BseLI CCNNNNNNNGG 2 cut(s) 277, 703
BseMI GCAATG 2 cut(s) 426, 549
BseMII CTCAG 4 cut(s) 141, 247, 489, 1008
BseNI ACTGG 3 cut(s) 258, 824, 1115
BseXI GCAGC 4 cut(s) 150, 214, 820, 949
BseYI CCCAGC 1 cut(s) 836
BsgI GTGCAG 1 cut(s) 711
Bsh1236I CGCG 1 cut(s) 720
BshFI GGCC 5 cut(s) 158, 455, 701, 955, 1108
BsiHKAI GWGCWC 2 cut(s) 135, 808
BsiSI CCGG 3 cut(s) 108, 436, 632
BslFI GGGAC 3 cut(s) 479, 836, 894
BslI CCNNNNNNNGG 2 cut(s) 277, 703
BsmFI GGGAC 3 cut(s) 479, 836, 894
BsnI GGCC 5 cut(s) 158, 455, 701, 955, 1108
Bsp1286I GDGCHC 2 cut(s) 135, 808
Bsp1407I TGTACA 1 cut(s) 663
Bsp143I GATC 2 cut(s) 9, 568
Bsp19I CCATGG 2 cut(s) 702, 744
BspACI CCGC 2 cut(s) 273, 613
BspANI GGCC 5 cut(s) 158, 455, 701, 955, 1108
BspCNI CTCAG 4 cut(s) 142, 246, 490, 1009
BspFNI CGCG 1 cut(s) 720
BspHI TCATGA 1 cut(s) 1131
BspLI GGNNCC 1 cut(s) 61
BsrDI GCAATG 2 cut(s) 426, 549
BsrGI TGTACA 1 cut(s) 663
BsrI ACTGG 3 cut(s) 258, 824, 1115
BssECI CCNNGG 6 cut(s) 222, 276, 456, 702, 744, 798
BssMI GATC 2 cut(s) 9, 568
BssNAI GTATAC 1 cut(s) 737
BssNI GRCGYC 1 cut(s) 423
BssT1I CCWWGG 4 cut(s) 222, 702, 744, 798
Bst1107I GTATAC 1 cut(s) 737
Bst2UI CCWGG 2 cut(s) 457, 698
Bst4CI ACNGT 3 cut(s) 7, 36, 415
BstACI GRCGYC 1 cut(s) 423
BstAUI TGTACA 1 cut(s) 663
BstBAI YACGTR 1 cut(s) 618
BstC8I GCNNGC 3 cut(s) 113, 433, 926
BstDEI CTNAG 4 cut(s) 150, 233, 498, 1017
BstDSI CCRYGG 2 cut(s) 702, 744
BstF5I GGATG 3 cut(s) 688, 954, 1012
BstFNI CGCG 1 cut(s) 720
BstHHI GCGC 2 cut(s) 624, 720
BstKTI GATC 2 cut(s) 12, 571
BstMBI GATC 2 cut(s) 9, 568
BstMWI GCNNNNNNNGC 7 cut(s) 139, 621, 628, 698, 715, 812, 842
BstNI CCWGG 2 cut(s) 457, 698
BstNSI RCATGY 3 cut(s) 115, 253, 829
BstSCI CCNGG 4 cut(s) 435, 455, 631, 696
BstUI CGCG 1 cut(s) 720
BstV1I GCAGC 4 cut(s) 150, 214, 820, 949
BstV2I GAAGAC 1 cut(s) 172
BstZ17I GTATAC 1 cut(s) 737
BsuRI GGCC 5 cut(s) 158, 455, 701, 955, 1108
BtgI CCRYGG 2 cut(s) 702, 744
BtsCI GGATG 3 cut(s) 688, 954, 1012
BtsI GCAGTG 3 cut(s) 694, 885, 972
BtsIMutI CAGTG 5 cut(s) 265, 450, 694, 885, 972
Cac8I GCNNGC 3 cut(s) 113, 433, 926
CciI TCATGA 1 cut(s) 1131
CfoI GCGC 2 cut(s) 624, 720
CseI GACGC 1 cut(s) 431
Csp6I GTAC 4 cut(s) 241, 358, 664, 817
CviAII CATG 6 cut(s) 112, 250, 703, 745, 826, 1132
CviQI GTAC 4 cut(s) 241, 358, 664, 817
DdeI CTNAG 4 cut(s) 150, 233, 498, 1017
DpnI GATC 2 cut(s) 11, 570
DpnII GATC 2 cut(s) 9, 568
EaeI YGGCCR 1 cut(s) 156
Ecl136II GAGCTC 1 cut(s) 133
Eco130I CCWWGG 4 cut(s) 222, 702, 744, 798
Eco147I AGGCCT 1 cut(s) 955
Eco24I GRGCYC 1 cut(s) 135
Eco53kI GAGCTC 1 cut(s) 133
Eco72I CACGTG 1 cut(s) 618
EcoICRI GAGCTC 1 cut(s) 133
EcoRI GAATTC 1 cut(s) 103
EcoRII CCWGG 2 cut(s) 455, 696
EcoT14I CCWWGG 4 cut(s) 222, 702, 744, 798
EcoT38I GRGCYC 1 cut(s) 135
ErhI CCWWGG 4 cut(s) 222, 702, 744, 798
FaeI CATG 6 cut(s) 115, 253, 706, 748, 829, 1135
FalI AAGNNNNNCTT 4 cut(s) 344, 376, 908, 940
FaqI GGGAC 3 cut(s) 479, 836, 894
FatI CATG 6 cut(s) 111, 249, 702, 744, 825, 1131
FauI CCCGC 1 cut(s) 280
FblI GTMKAC 1 cut(s) 736
Fnu4HI GCNGC 4 cut(s) 164, 228, 834, 963
FokI GGATG 3 cut(s) 695, 961, 1019
FriOI GRGCYC 1 cut(s) 135
Fsp4HI GCNGC 4 cut(s) 164, 228, 834, 963
GlaI GCGC 2 cut(s) 623, 719
GluI GCNGC 4 cut(s) 164, 228, 834, 963
GsaI CCCAGC 1 cut(s) 840
GsuI CTGGAG 1 cut(s) 927
HaeIII GGCC 5 cut(s) 158, 455, 701, 955, 1108
HapII CCGG 3 cut(s) 108, 436, 632
HgaI GACGC 1 cut(s) 431
HhaI GCGC 2 cut(s) 624, 720
Hin1I GRCGYC 1 cut(s) 423
Hin1II CATG 6 cut(s) 115, 253, 706, 748, 829, 1135
Hin6I GCGC 2 cut(s) 622, 718
HinP1I GCGC 2 cut(s) 622, 718
HincII GTYRAC 1 cut(s) 577
HindII GTYRAC 1 cut(s) 577
HinfI GANTC 5 cut(s) 92, 317, 440, 500, 882
HpaII CCGG 3 cut(s) 108, 436, 632
HphI GGTGA 4 cut(s) 62, 175, 312, 1057
Hpy166II GTNNAC 4 cut(s) 241, 577, 737, 757
Hpy188I TCNGA 3 cut(s) 151, 328, 1018
Hpy188III TCNNGA 3 cut(s) 25, 906, 1132
Hpy8I GTNNAC 4 cut(s) 241, 577, 737, 757
Hpy99I CGWCG 1 cut(s) 425
HpyAV CCTTC 7 cut(s) 333, 445, 541, 1015, 1098, 1119, 1150
HpyCH4III ACNGT 3 cut(s) 7, 36, 415
HpyCH4IV ACGT 1 cut(s) 617
HpyCH4V TGCA 6 cut(s) 311, 536, 601, 692, 995, 1029
HpyF10VI GCNNNNNNNGC 7 cut(s) 139, 621, 628, 698, 715, 812, 842
HpyF3I CTNAG 4 cut(s) 150, 233, 498, 1017
HpySE526I ACGT 1 cut(s) 617
Hsp92I GRCGYC 1 cut(s) 423
Hsp92II CATG 6 cut(s) 115, 253, 706, 748, 829, 1135
HspAI GCGC 2 cut(s) 622, 718
Kzo9I GATC 2 cut(s) 9, 568
LmnI GCTCC 2 cut(s) 65, 706
Lsp1109I GCAGC 4 cut(s) 150, 214, 820, 949
LweI GCATC 4 cut(s) 33, 188, 901, 1022
MaeII ACGT 1 cut(s) 617
MaeIII GTNAC 3 cut(s) 50, 280, 331
MalI GATC 2 cut(s) 11, 570
MboI GATC 2 cut(s) 9, 568
MboII GAAGA 4 cut(s) 172, 533, 568, 670
MhlI GDGCHC 2 cut(s) 135, 808
MluCI AATT 3 cut(s) 70, 103, 507
MlyI GAGTC 4 cut(s) 311, 449, 509, 876
MmeI TCCRAC 1 cut(s) 354
MseI TTAA 3 cut(s) 66, 138, 872
MslI CAYNNNNRTG 2 cut(s) 413, 977
MspI CCGG 3 cut(s) 108, 436, 632
MspR9I CCNGG 4 cut(s) 437, 457, 633, 698
MvaI CCWGG 2 cut(s) 457, 698
MvnI CGCG 1 cut(s) 720
MwoI GCNNNNNNNGC 7 cut(s) 139, 621, 628, 698, 715, 812, 842
NciI CCSGG 2 cut(s) 437, 633
NcoI CCATGG 2 cut(s) 702, 744
NdeII GATC 2 cut(s) 9, 568
NlaIII CATG 6 cut(s) 115, 253, 706, 748, 829, 1135
NlaIV GGNNCC 1 cut(s) 61
NmuCI GTSAC 2 cut(s) 50, 331
NspI RCATGY 3 cut(s) 115, 253, 829
OliI CACNNNNGTG 2 cut(s) 413, 977
PaeI GCATGC 1 cut(s) 115
PagI TCATGA 1 cut(s) 1131
PceI AGGCCT 1 cut(s) 955
PciI ACATGT 2 cut(s) 249, 825
PfeI GAWTC 1 cut(s) 92
PflMI CCANNNNNTGG 1 cut(s) 703
PkrI GCNGC 4 cut(s) 165, 229, 835, 964
PleI GAGTC 4 cut(s) 311, 448, 508, 876
PmaCI CACGTG 1 cut(s) 618
PmlI CACGTG 1 cut(s) 618
PpsI GAGTC 4 cut(s) 311, 448, 508, 876
Ppu21I YACGTR 1 cut(s) 618
PscI ACATGT 2 cut(s) 249, 825
PsiI TTATAA 1 cut(s) 714
Psp124BI GAGCTC 1 cut(s) 135
Psp6I CCWGG 2 cut(s) 455, 696
PspCI CACGTG 1 cut(s) 618
PspFI CCCAGC 1 cut(s) 836
PspGI CCWGG 2 cut(s) 455, 696
PspN4I GGNNCC 1 cut(s) 61
RsaI GTAC 4 cut(s) 242, 359, 665, 818
RsaNI GTAC 4 cut(s) 241, 358, 664, 817
RseI CAYNNNNRTG 2 cut(s) 413, 977
SacI GAGCTC 1 cut(s) 135
SaqAI TTAA 3 cut(s) 66, 138, 872
SatI GCNGC 4 cut(s) 164, 228, 834, 963
Sau3AI GATC 2 cut(s) 9, 568
ScaI AGTACT 1 cut(s) 359
SchI GAGTC 4 cut(s) 311, 449, 509, 876
ScrFI CCNGG 4 cut(s) 437, 457, 633, 698
SduI GDGCHC 2 cut(s) 135, 808
SfaNI GCATC 4 cut(s) 33, 188, 901, 1022
SmiMI CAYNNNNRTG 2 cut(s) 413, 977
SmlI CTYRAG 3 cut(s) 467, 782, 929
SmoI CTYRAG 3 cut(s) 467, 782, 929
SphI GCATGC 1 cut(s) 115
Sse9I AATT 3 cut(s) 70, 103, 507
SseBI AGGCCT 1 cut(s) 955
SsiI CCGC 2 cut(s) 273, 613
SstI GAGCTC 1 cut(s) 135
StuI AGGCCT 1 cut(s) 955
StyD4I CCNGG 4 cut(s) 435, 455, 631, 696
StyI CCWWGG 4 cut(s) 222, 702, 744, 798
TaaI ACNGT 3 cut(s) 7, 36, 415
TaiI ACGT 1 cut(s) 620
TaqI TCGA 4 cut(s) 12, 90, 196, 420
TasI AATT 3 cut(s) 70, 103, 507
TatI WGTACW 2 cut(s) 357, 663
TfiI GAWTC 1 cut(s) 92
Tru1I TTAA 3 cut(s) 66, 138, 872
Tru9I TTAA 3 cut(s) 66, 138, 872
TscAI CASTG 5 cut(s) 265, 450, 694, 892, 979
TseFI GTSAC 2 cut(s) 50, 331
TseI GCWGC 4 cut(s) 163, 227, 833, 962
Tsp45I GTSAC 2 cut(s) 50, 331
TspDTI ATGAA 4 cut(s) 401, 560, 569, 1148
TspGWI ACGGA 1 cut(s) 754
TspRI CASTG 5 cut(s) 265, 450, 694, 892, 979
Van91I CCANNNNNTGG 1 cut(s) 703
XapI RAATTY 2 cut(s) 103, 507
XceI RCATGY 3 cut(s) 115, 253, 829
XcmI CCANNNNNNNNNTGG 1 cut(s) 805
XmiI GTMKAC 1 cut(s) 736
ZrmI AGTACT 1 cut(s) 359
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.