RchiOBHm_Chr0c11g0499481

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: Sequence Only
Biological Identity
rosa_chinensis
Unknown
OG0000101
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1245 bp
ATGGAGGACAGTACTAGTTCCCCCAATTCTTCCGCCGATGGTCTCAAGAAACGTGTCATCAAGGTTTTCAAGGATGCGACCAAAGACTGTGAGGACAAGGTCTTGAAAAAAATGTTTGACTCCATTGGCGACTATGACTCCCTTAACAACTATGCCTTTCATGTCTTCAGAACATTGGCAAATTCCGGCATCCCTGAGGAAGCCAAAGAGCTCTTTAAGCCAAAGAGCTCTAAGTTGGCTGTACTGCCTGACGTGGCCATCTTCACCATTGTCATTCGGGACTATGCCAATGCCGGCAAGGCCAACGCTGCTCACAAGGTCTACCAGCAAATGATAGCCGCCGGTGTCGCCCCCACCTCCTGCACTTACTCTATACTCATCACGGCACTTGCAACAGACTCGTCTTCTGATGTCAATTTTGTTGGGTATGCCAACAAGTACTTTTTGGAAATGTTGGATAAGGGGATGAAGCCCCATTCTGCCTCCTGCGTGACTGTTGTCGACGCCATTGCCTGCCGGGAGTCAGTGGAGAAGGTCAGGGAGTTCCTTGAGCAGATACAAGCAAAGGGGTTCGTCCCTGAGTCCAAAATTTTTCAGCTTGGAGAAACCCACCTTGAAGAAGCAATGAAAAAAATGAAGATGAATGATGATCTCATCACCAATACCACTGACAAGGATGTGCAAAAAGTATTCCGCACGTGGAACACCAAGCCGGATTGCCTCTACAAAAAGGCGTTGAAGATGTACAAGGCTTTGATTGAGGATGGCAATGCAGAACAGACCATGGAGCTTTATAAGTGCGTTGTTGAGATGTGTATGCAGCCCATGGTTGTAGTGCACACCTCCGTTATTGAAGCCTATCTCAAGTTTGGCAAGACCAAGGGTGCTCTGGAGGCATACTACGGCATGTTAGCTGCTGGGGTTGCCCCAAACTCCTACACTTACACTGTTCTAATCAAGGGACTCACTGCTGACCCCAACTTCTCTGGAGATGCCAAGAAGTGCTTGCTTGAGATGATGGACAAGGGGATGAGGCCTAATGCTGCCACCTACACTGCTGTGATAGAGAGCTTTGCAAAGCAAGAGGATGAGGCATCTGAGGAGGAGTGCAAAGAGTTGGTGGAGGTGATGATGGGTAAGGGGTTTGTGCCAAATGCAAAGGCTATGATGGAGGTTCTAAAGGGAAGACCAAAAGCTGTGATAAGAGGGGTCATGAACATTGTCATTTCCAAGTTGAAGGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

414

Amino Acids

45.82

Weight (kDa)

7.47

Isoelectric Point (pI)

33.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 82 - 129 8e-07 Pentatricopeptide repeat domain
PPR_2 PF13041 83 - 131 6.6e-12 PPR repeat family
PPR_long PF17177 244 - 393 2.4e-06 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 276 - 322 3.5e-10 PPR repeat family
TPR_24 PF23276 280 - 363 9.7e-07 Fungal tetratrico peptide repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 795
AccI GTMKAC 2 cut(s) 321, 501
AciI CCGC 3 cut(s) 33, 339, 694
AcoI YGGCCR 1 cut(s) 255
AcsI RAATTY 2 cut(s) 181, 588
AcuI CTGAAG 1 cut(s) 151
AcvI CACGTG 1 cut(s) 699
AcyI GRCGYC 1 cut(s) 504
AfaI GTAC 4 cut(s) 13, 243, 440, 746
AflIII ACRYGT 1 cut(s) 52
AgsI TTSAA 6 cut(s) 70, 106, 617, 739, 854, 1237
AhlI ACTAGT 1 cut(s) 14
AjiI CACGTC 1 cut(s) 253
AleI CACNNNNGTG 1 cut(s) 1058
AluBI AGCT 7 cut(s) 211, 228, 598, 790, 914, 1071, 1196
AluI AGCT 7 cut(s) 211, 228, 598, 790, 914, 1071, 1196
Alw21I GWGCWC 4 cut(s) 213, 230, 840, 889
Alw26I GTCTC 1 cut(s) 47
Alw44I GTGCAC 1 cut(s) 836
AoxI GGCC 3 cut(s) 255, 300, 1034
ApaLI GTGCAC 1 cut(s) 836
ApeKI GCWGC 4 cut(s) 308, 820, 914, 1043
ApoI RAATTY 2 cut(s) 181, 588
AsuC2I CCSGG 1 cut(s) 518
AsuHPI GGTGA 3 cut(s) 256, 649, 1138
AxyI CCTNAGG 1 cut(s) 195
BaeGI GKGCMC 1 cut(s) 840
BalI TGGCCA 1 cut(s) 257
BanII GRGCYC 2 cut(s) 213, 230
BbrPI CACGTG 1 cut(s) 699
BbsI GAAGAC 3 cut(s) 157, 396, 1192
Bbv12I GWGCWC 4 cut(s) 213, 230, 840, 889
BbvI GCAGC 4 cut(s) 295, 832, 901, 1030
BccI CCATC 6 cut(s) 32, 266, 758, 1012, 1126, 1162
BceAI ACGGC 2 cut(s) 399, 919
BcgI CGANNNNNNTGC 4 cut(s) 381, 415, 491, 525
BcnI CCSGG 1 cut(s) 518
BcoDI GTCTC 1 cut(s) 47
BcuI ACTAGT 1 cut(s) 14
BfaI CTAG 1 cut(s) 15
BglI GCCNNNNNGGC 1 cut(s) 299
BisI GCNGC 5 cut(s) 309, 339, 821, 915, 1044
BlsI GCNGC 5 cut(s) 310, 340, 822, 916, 1045
BmcAI AGTACT 2 cut(s) 13, 440
Bme1390I CCNGG 1 cut(s) 518
BmgBI CACGTC 1 cut(s) 253
BmrFI CCNGG 1 cut(s) 518
BmsI GCATC 4 cut(s) 64, 198, 982, 1103
BoxI GACNNNNGTC 1 cut(s) 497
BpiI GAAGAC 3 cut(s) 157, 396, 1192
BpmI CTGGAG 2 cut(s) 911, 1008
BpuEI CTTGAG 4 cut(s) 29, 569, 848, 1031
BpuMI CCSGG 1 cut(s) 518
BsaAI YACGTR 1 cut(s) 699
BsaHI GRCGYC 1 cut(s) 504
BsaI GGTCTC 1 cut(s) 47
BsaJI CCNNGG 3 cut(s) 783, 825, 879
BsaXI ACNNNNNCTCC 2 cut(s) 122, 152
Bse118I RCCGGY 2 cut(s) 293, 341
Bse21I CCTNAGG 1 cut(s) 195
Bse3DI GCAATG 3 cut(s) 507, 630, 775
BseDI CCNNGG 3 cut(s) 783, 825, 879
BseGI GGATG 7 cut(s) 79, 189, 471, 682, 769, 1035, 1093
BseMI GCAATG 3 cut(s) 507, 630, 775
BseMII CTCAG 3 cut(s) 186, 570, 1089
BseRI GAGGAG 2 cut(s) 1115, 1118
BseSI GKGCMC 1 cut(s) 840
BseXI GCAGC 4 cut(s) 295, 832, 901, 1030
BseYI CCCAGC 1 cut(s) 917
BsgI GTGCAG 1 cut(s) 346
BshFI GGCC 3 cut(s) 257, 302, 1036
BsiHKAI GWGCWC 4 cut(s) 213, 230, 840, 889
BsiSI CCGG 5 cut(s) 186, 294, 342, 517, 713
BslFI GGGAC 3 cut(s) 293, 560, 975
BsmAI GTCTC 1 cut(s) 47
BsmFI GGGAC 3 cut(s) 293, 560, 975
BsnI GGCC 3 cut(s) 257, 302, 1036
Bso31I GGTCTC 1 cut(s) 47
Bsp1286I GDGCHC 4 cut(s) 213, 230, 840, 889
Bsp1407I TGTACA 1 cut(s) 744
Bsp143I GATC 1 cut(s) 649
Bsp19I CCATGG 2 cut(s) 783, 825
BspACI CCGC 3 cut(s) 33, 339, 694
BspANI GGCC 3 cut(s) 257, 302, 1036
BspCNI CTCAG 3 cut(s) 187, 571, 1090
BspHI TCATGA 1 cut(s) 1212
BspTNI GGTCTC 1 cut(s) 47
BsrDI GCAATG 3 cut(s) 507, 630, 775
BsrFI RCCGGY 2 cut(s) 293, 341
BsrGI TGTACA 1 cut(s) 744
BssAI RCCGGY 2 cut(s) 293, 341
BssECI CCNNGG 3 cut(s) 783, 825, 879
BssMI GATC 1 cut(s) 649
BssNI GRCGYC 1 cut(s) 504
BssT1I CCWWGG 3 cut(s) 783, 825, 879
Bst4CI ACNGT 4 cut(s) 11, 89, 496, 949
BstACI GRCGYC 1 cut(s) 504
BstAUI TGTACA 1 cut(s) 744
BstBAI YACGTR 1 cut(s) 699
BstC8I GCNNGC 3 cut(s) 295, 514, 1007
BstDEI CTNAG 4 cut(s) 195, 231, 579, 1098
BstDSI CCRYGG 2 cut(s) 783, 825
BstF5I GGATG 7 cut(s) 79, 189, 471, 682, 769, 1035, 1093
BstKTI GATC 1 cut(s) 652
BstMAI GTCTC 1 cut(s) 47
BstMBI GATC 1 cut(s) 649
BstMWI GCNNNNNNNGC 6 cut(s) 217, 299, 308, 347, 893, 923
BstNSI RCATGY 1 cut(s) 910
BstPAI GACNNNNGTC 1 cut(s) 497
BstSCI CCNGG 1 cut(s) 516
BstSLI GKGCMC 1 cut(s) 840
BstV1I GCAGC 4 cut(s) 295, 832, 901, 1030
BstV2I GAAGAC 3 cut(s) 157, 396, 1192
Bsu36I CCTNAGG 1 cut(s) 195
BsuRI GGCC 3 cut(s) 257, 302, 1036
BtgI CCRYGG 2 cut(s) 783, 825
BtrI CACGTC 1 cut(s) 253
BtsCI GGATG 7 cut(s) 79, 189, 471, 682, 769, 1035, 1093
BtsI GCAGTG 2 cut(s) 966, 1053
BtsIMutI CAGTG 5 cut(s) 531, 666, 945, 966, 1053
Cac8I GCNNGC 3 cut(s) 295, 514, 1007
CciI TCATGA 1 cut(s) 1212
Cfr10I RCCGGY 2 cut(s) 293, 341
CseI GACGC 1 cut(s) 512
Csp6I GTAC 4 cut(s) 12, 242, 439, 745
CviAII CATG 5 cut(s) 161, 784, 826, 907, 1213
CviQI GTAC 4 cut(s) 12, 242, 439, 745
DdeI CTNAG 4 cut(s) 195, 231, 579, 1098
DpnI GATC 1 cut(s) 651
DpnII GATC 1 cut(s) 649
EaeI YGGCCR 1 cut(s) 255
EciI GGCGGA 1 cut(s) 22
Ecl136II GAGCTC 2 cut(s) 211, 228
Eco130I CCWWGG 3 cut(s) 783, 825, 879
Eco147I AGGCCT 1 cut(s) 1036
Eco24I GRGCYC 2 cut(s) 213, 230
Eco31I GGTCTC 1 cut(s) 47
Eco53kI GAGCTC 2 cut(s) 211, 228
Eco57I CTGAAG 1 cut(s) 151
Eco72I CACGTG 1 cut(s) 699
Eco81I CCTNAGG 1 cut(s) 195
EcoICRI GAGCTC 2 cut(s) 211, 228
EcoT14I CCWWGG 3 cut(s) 783, 825, 879
EcoT38I GRGCYC 2 cut(s) 213, 230
ErhI CCWWGG 3 cut(s) 783, 825, 879
FaeI CATG 5 cut(s) 164, 787, 829, 910, 1216
FalI AAGNNNNNCTT 2 cut(s) 989, 1021
FaqI GGGAC 3 cut(s) 293, 560, 975
FatI CATG 5 cut(s) 160, 783, 825, 906, 1212
FblI GTMKAC 2 cut(s) 321, 501
Fnu4HI GCNGC 5 cut(s) 309, 339, 821, 915, 1044
FokI GGATG 7 cut(s) 86, 176, 478, 689, 776, 1042, 1100
FriOI GRGCYC 2 cut(s) 213, 230
Fsp4HI GCNGC 5 cut(s) 309, 339, 821, 915, 1044
FspBI CTAG 1 cut(s) 15
GluI GCNGC 5 cut(s) 309, 339, 821, 915, 1044
GsaI CCCAGC 1 cut(s) 921
GsuI CTGGAG 2 cut(s) 911, 1008
HaeIII GGCC 3 cut(s) 257, 302, 1036
HapII CCGG 5 cut(s) 186, 294, 342, 517, 713
HgaI GACGC 1 cut(s) 512
Hin1I GRCGYC 1 cut(s) 504
Hin1II CATG 5 cut(s) 164, 787, 829, 910, 1216
HincII GTYRAC 1 cut(s) 502
HindII GTYRAC 1 cut(s) 502
HinfI GANTC 6 cut(s) 119, 137, 398, 521, 581, 963
HpaII CCGG 5 cut(s) 186, 294, 342, 517, 713
HphI GGTGA 3 cut(s) 256, 649, 1138
Hpy166II GTNNAC 3 cut(s) 322, 502, 838
Hpy188I TCNGA 3 cut(s) 170, 409, 1099
Hpy188III TCNNGA 6 cut(s) 46, 103, 278, 890, 987, 1213
Hpy8I GTNNAC 3 cut(s) 322, 502, 838
Hpy99I CGWCG 1 cut(s) 506
HpyAV CCTTC 2 cut(s) 526, 1231
HpyCH4III ACNGT 4 cut(s) 11, 89, 496, 949
HpyCH4IV ACGT 3 cut(s) 52, 252, 698
HpyCH4V TGCA 9 cut(s) 363, 392, 682, 773, 820, 838, 1076, 1110, 1157
HpyF10VI GCNNNNNNNGC 6 cut(s) 217, 299, 308, 347, 893, 923
HpyF3I CTNAG 4 cut(s) 195, 231, 579, 1098
HpySE526I ACGT 3 cut(s) 52, 252, 698
Hsp92I GRCGYC 1 cut(s) 504
Hsp92II CATG 5 cut(s) 164, 787, 829, 910, 1216
KroI GCCGGC 1 cut(s) 293
KroNI GCCGGC 1 cut(s) 295
Kzo9I GATC 1 cut(s) 649
LmnI GCTCC 1 cut(s) 787
Lsp1109I GCAGC 4 cut(s) 295, 832, 901, 1030
LweI GCATC 4 cut(s) 64, 198, 982, 1103
MaeI CTAG 1 cut(s) 15
MaeII ACGT 3 cut(s) 52, 252, 698
MaeIII GTNAC 1 cut(s) 490
MalI GATC 1 cut(s) 651
MboI GATC 1 cut(s) 649
MboII GAAGA 8 cut(s) 21, 157, 253, 396, 629, 649, 751, 1197
MhlI GDGCHC 4 cut(s) 213, 230, 840, 889
MlsI TGGCCA 1 cut(s) 257
MluCI AATT 4 cut(s) 25, 181, 415, 588
MluNI TGGCCA 1 cut(s) 257
MlyI GAGTC 6 cut(s) 113, 131, 392, 530, 590, 957
MmeI TCCRAC 1 cut(s) 435
Mox20I TGGCCA 1 cut(s) 257
MroNI GCCGGC 1 cut(s) 293
MscI TGGCCA 1 cut(s) 257
MseI TTAA 2 cut(s) 144, 216
MslI CAYNNNNRTG 1 cut(s) 1058
Msp20I TGGCCA 1 cut(s) 257
MspI CCGG 5 cut(s) 186, 294, 342, 517, 713
MspR9I CCNGG 1 cut(s) 518
MwoI GCNNNNNNNGC 6 cut(s) 217, 299, 308, 347, 893, 923
NaeI GCCGGC 1 cut(s) 295
NciI CCSGG 1 cut(s) 518
NcoI CCATGG 2 cut(s) 783, 825
NdeII GATC 1 cut(s) 649
NgoMIV GCCGGC 1 cut(s) 293
NlaIII CATG 5 cut(s) 164, 787, 829, 910, 1216
NmuCI GTSAC 1 cut(s) 490
NspI RCATGY 1 cut(s) 910
OliI CACNNNNGTG 1 cut(s) 1058
PagI TCATGA 1 cut(s) 1212
PceI AGGCCT 1 cut(s) 1036
PdiI GCCGGC 1 cut(s) 295
PflFI GACNNNGTC 1 cut(s) 98
PkrI GCNGC 5 cut(s) 310, 340, 822, 916, 1045
PleI GAGTC 6 cut(s) 113, 131, 392, 529, 589, 957
PmaCI CACGTG 1 cut(s) 699
PmlI CACGTG 1 cut(s) 699
PpsI GAGTC 6 cut(s) 113, 131, 392, 529, 589, 957
Ppu21I YACGTR 1 cut(s) 699
PshAI GACNNNNGTC 1 cut(s) 497
PsiI TTATAA 1 cut(s) 795
Psp124BI GAGCTC 2 cut(s) 213, 230
PspCI CACGTG 1 cut(s) 699
PspFI CCCAGC 1 cut(s) 917
PsyI GACNNNGTC 1 cut(s) 98
RsaI GTAC 4 cut(s) 13, 243, 440, 746
RsaNI GTAC 4 cut(s) 12, 242, 439, 745
RseI CAYNNNNRTG 1 cut(s) 1058
SacI GAGCTC 2 cut(s) 213, 230
SalI GTCGAC 1 cut(s) 500
SaqAI TTAA 2 cut(s) 144, 216
SatI GCNGC 5 cut(s) 309, 339, 821, 915, 1044
Sau3AI GATC 1 cut(s) 649
ScaI AGTACT 2 cut(s) 13, 440
SchI GAGTC 6 cut(s) 113, 131, 392, 530, 590, 957
ScrFI CCNGG 1 cut(s) 518
SduI GDGCHC 4 cut(s) 213, 230, 840, 889
SfaNI GCATC 4 cut(s) 64, 198, 982, 1103
SgrAI CRCCGGYG 1 cut(s) 341
SmiMI CAYNNNNRTG 1 cut(s) 1058
SmlI CTYRAG 4 cut(s) 44, 548, 863, 1010
SmoI CTYRAG 4 cut(s) 44, 548, 863, 1010
SpeI ACTAGT 1 cut(s) 14
Sse9I AATT 4 cut(s) 25, 181, 415, 588
SseBI AGGCCT 1 cut(s) 1036
SsiI CCGC 3 cut(s) 33, 339, 694
SspMI CTAG 1 cut(s) 15
SstI GAGCTC 2 cut(s) 213, 230
StuI AGGCCT 1 cut(s) 1036
StyD4I CCNGG 1 cut(s) 516
StyI CCWWGG 3 cut(s) 783, 825, 879
TaaI ACNGT 4 cut(s) 11, 89, 496, 949
TaiI ACGT 3 cut(s) 55, 255, 701
TaqI TCGA 1 cut(s) 501
TasI AATT 4 cut(s) 25, 181, 415, 588
TatI WGTACW 4 cut(s) 11, 241, 438, 744
TauI GCSGC 1 cut(s) 341
Tru1I TTAA 2 cut(s) 144, 216
Tru9I TTAA 2 cut(s) 144, 216
TscAI CASTG 5 cut(s) 531, 673, 952, 973, 1060
TseFI GTSAC 1 cut(s) 490
TseI GCWGC 4 cut(s) 308, 820, 914, 1043
Tsp45I GTSAC 1 cut(s) 490
TspDTI ATGAA 6 cut(s) 149, 482, 641, 650, 656, 1229
TspGWI ACGGA 1 cut(s) 835
TspRI CASTG 5 cut(s) 531, 673, 952, 973, 1060
Tth111I GACNNNGTC 1 cut(s) 98
VneI GTGCAC 1 cut(s) 836
XapI RAATTY 2 cut(s) 181, 588
XceI RCATGY 1 cut(s) 910
XcmI CCANNNNNNNNNTGG 1 cut(s) 886
XmiI GTMKAC 2 cut(s) 321, 501
XspI CTAG 1 cut(s) 15
ZrmI AGTACT 2 cut(s) 13, 440
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.