RchiOBHm_Chr0c11g0499511

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: Sequence Only
Biological Identity
rosa_chinensis
Unknown
OG0000101
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1233 bp
ATGGGGGACACTGCTTGCCCCAATTCTTGTGCTGATGACCTCAAGAAACATGTAATGGAGGTTTTTGAGGAGGCCACCAAAGACTCTGAGGACTTTGTTTTGCCACTAAAATTTTCCATGATTCGCAACTATGATGACCTTAACGAATATGCTATTCAAATATTCAATTCTATGGCAAACGACGACCTCCTCGACGAAGCCAAAGAGCTCTTTAAGCCTCTCTCTGACCAGGGCGTACTGCCAGACGTGGCTGCCCTCACCATTGTCATCGGGGAATACGCCTTTGCTGGCGAGATCAAGGCTGCTCTCAAGGTCTACCAGCGCATGTTAGCCACCGGTGTCTCCCCCACCTCCCACACTTACACTCTACTCATCATGGCCCTTGTAACAGACTCTTCTGATGTCAATTATGTTGGCCTTGCCAAGAAGTATTTTATGGAAATGTTGGGTAAGGGATTGAAGCCCCATGATGTGTCCTATATCTCTGTCTTTGATGCCATTGCCTGCCGGGAGTCGGTGGAGAATGCCAGGGAGTTCCTTGAGCAGATAAAAGCAAAGGGGTTCAGCCTTAAGTCCAATGTTTTCTACTTTGACGAAGCCCACCTCACAGAGGCAATGAAGATAACGAAGTTGCTCCATGATCTCCCCAACAACACGACTGACAAGGATATACAAAAGCTCTTCCGCAAGTGGTGCACCAGTGGACATGGCTTCCAGAAAGAGTCAATGAAGATGTACAAAACTCTGGTGAAGGATGGTAATGCAGACGAGGCCATGGAGGTTCTTATGTTGTTCATTAAGGGCATAAAACCAGCTATCCTAATCCATACCTGCATTATTGAGACCTACGTCAATGCTGGCAAGATCAAGGGTGCTCTTGAGGCTTACAAGGACATGGTAGCTGCTGGGGTTGCCCCAAACTCCTACACTTACACAGTTTTAATCAAGGGACTCATTGCTGACCCCAACTTCTTTGGAGATGACAAGAAGTTTTTGCTTGAGATGATGGATAAAGGGAAGTGGCCCAATGCTTCTACCTACACTGTGGTGATGGAGGGCTTTGCAAAGCAGGAGGACAAGGCAGCTGAGGAGGAGGGAAAAGAGTTGGTGGAGGTGATGATGGGTAAGGGGTTTGTGCTAAACGCAAAGGCTATGATGGAGGTTTTAAAGGGAAGACCAACAGCTGTGATAAGAAGGGTCATGAACATTGTCCTTTCTAAGTTGAAGGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

410

Amino Acids

45.77

Weight (kDa)

5.56

Isoelectric Point (pI)

21.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 81 - 128 6.3e-10 PPR repeat family
TPR_24 PF23276 251 - 360 3.7e-07 Fungal tetratrico peptide repeats
PPR_3 PF13812 266 - 316 7.7e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 276 - 318 2e-12 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000101)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G28420
fragaria_vesca FvH4_3g36751 FvH4_4g16590 FvH4_4g16590 FvH4_4g16590 FvH4_5g05670 FvH4_5g05700 FvH4_5g31002 FvH4_5g31070 FvH4_5g31080 FvH4_5g31080 FvH4_5g31080 FvH4_5g31150 FvH4_5g32070 FvH4_5g32080 FvH4_5g34900 FvH4_5g34930 FvH4_5g34930 FvH4_5g34950 FvH4_5g35000 FvH4_5g35000 FvH4_5g35000 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35050 FvH4_5g35060 FvH4_5g35070 FvH4_5g35071 FvH4_5g35080 FvH4_5g35253 FvH4_5g35254 FvH4_5g35300 FvH4_5g35300 FvH4_5g35320 FvH4_5g35320 FvH4_5g35320 FvH4_5g35322 FvH4_5g35330 FvH4_6g08812 FvH4_7g08990 FvH4_7g08991
rosa_chinensis RchiOBHm_Chr0c11g0499321 RchiOBHm_Chr0c11g0499331 RchiOBHm_Chr0c11g0499401 RchiOBHm_Chr0c11g0499411 RchiOBHm_Chr0c11g0499461 RchiOBHm_Chr0c11g0499471 RchiOBHm_Chr0c11g0499481 RchiOBHm_Chr0c11g0499501 RchiOBHm_Chr0c11g0499511 RchiOBHm_Chr0c11g0499551 RchiOBHm_Chr1g0342791 RchiOBHm_Chr1g0342991 RchiOBHm_Chr4g0419921 RchiOBHm_Chr4g0420021 RchiOBHm_Chr7g0193131 RchiOBHm_Chr7g0218371 RchiOBHm_Chr7g0218381 RchiOBHm_Chr7g0235811 RchiOBHm_Chr7g0235841 RchiOBHm_Chr7g0235851 RchiOBHm_Chr7g0235871 RchiOBHm_Chr7g0235881 RchiOBHm_Chr7g0235901 RchiOBHm_Chr7g0235921 RchiOBHm_Chr7g0235931 RchiOBHm_Chr7g0235941 RchiOBHm_Chr7g0235971 RchiOBHm_Chr7g0235981 RchiOBHm_Chr7g0235991 RchiOBHm_Chr7g0236021 RchiOBHm_Chr7g0236031 RchiOBHm_Chr7g0236041 RchiOBHm_Chr7g0236051 RchiOBHm_Chr7g0236071 RchiOBHm_Chr7g0236101 RchiOBHm_Chr7g0236111 RchiOBHm_Chr7g0236191 RchiOBHm_Chr7g0236201 RchiOBHm_Chr7g0236231 RchiOBHm_Chr7g0236241 RchiOBHm_Chr7g0236331 RchiOBHm_Chr7g0236591 RchiOBHm_Chr7g0236621 RchiOBHm_Chr7g0236631
rosa_laevigata RLG00000000990 RLG00000000992 RLG00000001071 RLG00000001073 RLG00000001074 RLG00000001075 RLG00000001083 RLG00000001096 RLG00000001097 RLG00000001099 RLG00000001106 RLG00000001108 RLG00000001110 RLG00000001112 RLG00000001119 RLG00000001120 RLG00000001123 RLG00000001128 RLG00000001129 RLG00000001130 RLG00000001131 RLG00000001132 RLG00000001133 RLG00000001136 RLG00000001255 RLG00000001929 RLG00000001930 RLG00000001932 RLG00000001934 RLG00000001935 RLG00000001940 RLG00000001942 RLG00000002624 RLG00000004293 RLG00000004294 RLG00000007792 RLG00000030009 RLG00000030011 RLG00000030012 RLG00000030014
rosa_multiflora Rmu_co8114088.1_g000001 Rmu_co8163812.1_g000001 Rmu_co8175782.1_g000001 Rmu_co8217500.1_g000001 Rmu_co8230787.1_g000001 Rmu_co8372547.1_g000001 Rmu_co8409897.1_g000001 Rmu_sc0000755.1_g000001 Rmu_sc0000755.1_g000003 Rmu_sc0002449.1_g000024 Rmu_sc0002536.1_g000007 Rmu_sc0002536.1_g000008 Rmu_sc0002536.1_g000013 Rmu_sc0002536.1_g000014 Rmu_sc0002921.1_g000004 Rmu_sc0002921.1_g000005 Rmu_sc0002921.1_g000007 Rmu_sc0003339.1_g000004 Rmu_sc0003461.1_g000006 Rmu_sc0005998.1_g000001 Rmu_sc0008183.1_g000003 Rmu_sc0008183.1_g000007 Rmu_sc0008183.1_g000009 Rmu_sc0008183.1_g000010 Rmu_sc0008183.1_g000011 Rmu_sc0008183.1_g000020 Rmu_sc0008183.1_g000022 Rmu_sc0008183.1_g000026 Rmu_sc0008940.1_g000007 Rmu_sc0008941.1_g000001 Rmu_sc0008941.1_g000002 Rmu_sc0008941.1_g000004 Rmu_sc0008941.1_g000005 Rmu_sc0008941.1_g000006 Rmu_sc0011173.1_g000001 Rmu_sc0011173.1_g000002 Rmu_sc0011173.1_g000008 Rmu_sc0011173.1_g000009 Rmu_sc0011173.1_g000013 Rmu_sc0011290.1_g000002 Rmu_sc0012908.1_g000002 Rmu_sc0013209.1_g000003 Rmu_sc0025395.1_g000001 Rmu_sc0025941.1_g000001 Rmu_sc0029089.1_g000001 Rmu_sc0036318.1_g000001 Rmu_sc0040213.1_g000001 Rmu_ssc0000092.1_g000038
rosa_roxburghii Rroxscaffold_3G00225010 Rroxscaffold_3G00225220 Rroxscaffold_3G00225300 Rroxscaffold_3G00225310 Rroxscaffold_3G00225390 Rroxscaffold_3G00225400 Rroxscaffold_3G00225470 Rroxscaffold_3G00225500 Rroxscaffold_3G00225570 Rroxscaffold_3G00225580 Rroxscaffold_3G00225600 Rroxscaffold_3G00225610 Rroxscaffold_3G00262350 Rroxscaffold_4G00313250
rosa_rugosa Rorug01G0145100.1 Rorug01G0145200.1 Rorug01G0145300.1 Rorug01G0145500.1 Rorug04G0161500 Rorug04G0161600 Rorug07G0007900 Rorug07G0008000 Rorug07G0008000 Rorug07G0273500 Rorug07G0273900 Rorug07G0274000 Rorug07G0274000 Rorug07G0274200.1 Rorug07G0274300 Rorug07G0274400 Rorug07G0293100 Rorug07G0293200 Rorug07G0293300 Rorug07G0293400 Rorug07G0293700 Rorug07G0293800 Rorug07G0294000 Rorug07G0294200 Rorug07G0294700 Rorug07G0294700 Rorug07G0295000 Rorug07G0295100 Rorug07G0295200 Rorug07G0295400 Rorug07G0295400 Rorug07G0296100 Rorug07G0297900 Rorug07G0297900 Rorug07G0298000 Rorug07G0298100
rosa_samantha Rh1DG165000 Rh1DG165100 Rh1DG165200 Rh1DG165600 Rh1DG165700 Rh1DG165800 Rh4DG221500 Rh7DG134800 Rh7DG134900 Rh7DG436900 Rh7DG437100 Rh7DG437300 Rh7DG437400 Rh7DG437500 Rh7DG437700 Rh7DG437800 Rh7DG438200 Rh7DG439200 Rh7DG439300 Rh7DG440300
rosa_wichuraiana Rw0G019880 Rw0G020650 Rw0G020670 Rw1G013620 Rw1G013630 Rw4G019180 Rw7G011360 Rw7G011370 Rw7G037220 Rw7G037240 Rw7G037260 Rw7G037270 Rw7G037280 Rw7G037300 Rw7G037380 Rw7G037390 Rw7G037560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 839
AccI GTMKAC 1 cut(s) 315
AciI CCGC 1 cut(s) 685
AcsI RAATTY 1 cut(s) 110
AfaI GTAC 2 cut(s) 237, 737
AfiI CCNNNNNNNGG 2 cut(s) 514, 610
AflII CTTAAG 1 cut(s) 569
AflIII ACRYGT 1 cut(s) 49
AgeI ACCGGT 1 cut(s) 335
AgsI TTSAA 4 cut(s) 158, 166, 460, 1225
AjiI CACGTC 1 cut(s) 247
AjnI CCWGG 2 cut(s) 228, 527
AleI CACNNNNGTG 1 cut(s) 1046
AluBI AGCT 6 cut(s) 208, 679, 815, 902, 1085, 1184
AluI AGCT 6 cut(s) 208, 679, 815, 902, 1085, 1184
Alw21I GWGCWC 3 cut(s) 210, 698, 877
Alw26I GTCTC 2 cut(s) 346, 836
Alw44I GTGCAC 1 cut(s) 694
AoxI GGCC 5 cut(s) 72, 378, 415, 771, 1022
ApaLI GTGCAC 1 cut(s) 694
ApeKI GCWGC 4 cut(s) 251, 302, 902, 1082
ApoI RAATTY 1 cut(s) 110
AsiGI ACCGGT 1 cut(s) 335
AspLEI GCGC 1 cut(s) 324
AspS9I GGNCC 2 cut(s) 379, 1023
AsuC2I CCSGG 1 cut(s) 509
AsuHPI GGTGA 4 cut(s) 250, 760, 1060, 1126
BaeGI GKGCMC 1 cut(s) 698
BanII GRGCYC 1 cut(s) 210
BbsI GAAGAC 1 cut(s) 1180
Bbv12I GWGCWC 3 cut(s) 210, 698, 877
BbvCI CCTCAGC 1 cut(s) 1086
BbvI GCAGC 4 cut(s) 238, 289, 889, 1094
BccI CCATC 5 cut(s) 749, 1000, 1045, 1114, 1150
BciT130I CCWGG 2 cut(s) 230, 529
BcnI CCSGG 1 cut(s) 509
BcoDI GTCTC 2 cut(s) 346, 836
BfrI CTTAAG 1 cut(s) 569
BfuAI ACCTGC 1 cut(s) 839
BisI GCNGC 4 cut(s) 252, 303, 903, 1083
BlsI GCNGC 4 cut(s) 253, 304, 904, 1084
Bme1390I CCNGG 3 cut(s) 230, 509, 529
BmgBI CACGTC 1 cut(s) 247
BmgT120I GGNCC 2 cut(s) 379, 1023
BmrFI CCNGG 3 cut(s) 230, 509, 529
BmsI GCATC 1 cut(s) 484
BoxI GACNNNNGTC 1 cut(s) 848
BpiI GAAGAC 1 cut(s) 1180
Bpu10I CCTNAGC 1 cut(s) 1086
BpuEI CTTGAG 5 cut(s) 26, 293, 560, 899, 1019
BpuMI CCSGG 1 cut(s) 509
BsaI GGTCTC 1 cut(s) 836
BsaJI CCNNGG 3 cut(s) 229, 528, 774
BsaWI WCCGGW 1 cut(s) 335
Bsc4I CCNNNNNNNGG 2 cut(s) 514, 610
Bse118I RCCGGY 1 cut(s) 335
Bse1I ACTGG 1 cut(s) 699
Bse3DI GCAATG 3 cut(s) 498, 621, 954
BseBI CCWGG 2 cut(s) 230, 529
BseDI CCNNGG 3 cut(s) 229, 528, 774
BseGI GGATG 1 cut(s) 760
BseLI CCNNNNNNNGG 2 cut(s) 514, 610
BseMI GCAATG 3 cut(s) 498, 621, 954
BseMII CTCAG 2 cut(s) 78, 1077
BseNI ACTGG 1 cut(s) 699
BseRI GAGGAG 4 cut(s) 83, 179, 1103, 1106
BseSI GKGCMC 1 cut(s) 698
BseXI GCAGC 4 cut(s) 238, 289, 889, 1094
BseYI CCCAGC 1 cut(s) 905
BshFI GGCC 5 cut(s) 74, 380, 417, 773, 1024
BshTI ACCGGT 1 cut(s) 335
BsiHKAI GWGCWC 3 cut(s) 210, 698, 877
BsiSI CCGG 2 cut(s) 336, 508
BslFI GGGAC 2 cut(s) 20, 963
BslI CCNNNNNNNGG 2 cut(s) 514, 610
BsmAI GTCTC 2 cut(s) 346, 836
BsmFI GGGAC 2 cut(s) 20, 963
BsmI GAATGC 1 cut(s) 529
BsnI GGCC 5 cut(s) 74, 380, 417, 773, 1024
Bso31I GGTCTC 1 cut(s) 836
Bsp1286I GDGCHC 3 cut(s) 210, 698, 877
Bsp1407I TGTACA 1 cut(s) 735
Bsp143I GATC 3 cut(s) 294, 640, 864
Bsp19I CCATGG 1 cut(s) 774
BspACI CCGC 1 cut(s) 685
BspANI GGCC 5 cut(s) 74, 380, 417, 773, 1024
BspCNI CTCAG 2 cut(s) 79, 1078
BspHI TCATGA 1 cut(s) 1200
BspMI ACCTGC 1 cut(s) 839
BspQI GCTCTTC 1 cut(s) 686
BspTI CTTAAG 1 cut(s) 569
BspTNI GGTCTC 1 cut(s) 836
BsrDI GCAATG 3 cut(s) 498, 621, 954
BsrFI RCCGGY 1 cut(s) 335
BsrGI TGTACA 1 cut(s) 735
BsrI ACTGG 1 cut(s) 699
BssAI RCCGGY 1 cut(s) 335
BssECI CCNNGG 3 cut(s) 229, 528, 774
BssMI GATC 3 cut(s) 294, 640, 864
BssT1I CCWWGG 1 cut(s) 774
Bst2UI CCWGG 2 cut(s) 230, 529
Bst4CI ACNGT 2 cut(s) 937, 1045
Bst6I CTCTTC 2 cut(s) 400, 686
BstAFI CTTAAG 1 cut(s) 569
BstAPI GCANNNNNTGC 1 cut(s) 693
BstAUI TGTACA 1 cut(s) 735
BstC8I GCNNGC 4 cut(s) 16, 289, 505, 859
BstDEI CTNAG 3 cut(s) 87, 1086, 1218
BstDSI CCRYGG 1 cut(s) 774
BstENI CCTNNNNNAGG 1 cut(s) 608
BstF5I GGATG 1 cut(s) 760
BstHHI GCGC 1 cut(s) 324
BstKTI GATC 3 cut(s) 297, 643, 867
BstMAI GTCTC 2 cut(s) 346, 836
BstMBI GATC 3 cut(s) 294, 640, 864
BstMWI GCNNNNNNNGC 5 cut(s) 214, 693, 770, 881, 911
BstNI CCWGG 2 cut(s) 230, 529
BstNSI RCATGY 2 cut(s) 53, 328
BstPAI GACNNNNGTC 1 cut(s) 848
BstSCI CCNGG 3 cut(s) 228, 507, 527
BstSLI GKGCMC 1 cut(s) 698
BstV1I GCAGC 4 cut(s) 238, 289, 889, 1094
BstV2I GAAGAC 1 cut(s) 1180
BsuRI GGCC 5 cut(s) 74, 380, 417, 773, 1024
BtgI CCRYGG 1 cut(s) 774
BtrI CACGTC 1 cut(s) 247
BtsCI GGATG 1 cut(s) 760
BtsI GCAGTG 1 cut(s) 9
BtsIMutI CAGTG 3 cut(s) 9, 706, 1041
BveI ACCTGC 1 cut(s) 839
Cac8I GCNNGC 4 cut(s) 16, 289, 505, 859
CciI TCATGA 1 cut(s) 1200
CfoI GCGC 1 cut(s) 324
Cfr10I RCCGGY 1 cut(s) 335
Cfr13I GGNCC 2 cut(s) 379, 1023
Csp6I GTAC 2 cut(s) 236, 736
CspAI ACCGGT 1 cut(s) 335
CviQI GTAC 2 cut(s) 236, 736
DdeI CTNAG 3 cut(s) 87, 1086, 1218
DpnI GATC 3 cut(s) 296, 642, 866
DpnII GATC 3 cut(s) 294, 640, 864
DraI TTTAAA 1 cut(s) 1167
Eam1104I CTCTTC 2 cut(s) 400, 686
EarI CTCTTC 2 cut(s) 400, 686
Ecl136II GAGCTC 1 cut(s) 208
Eco130I CCWWGG 1 cut(s) 774
Eco24I GRGCYC 1 cut(s) 210
Eco31I GGTCTC 1 cut(s) 836
Eco53kI GAGCTC 1 cut(s) 208
EcoICRI GAGCTC 1 cut(s) 208
EcoNI CCTNNNNNAGG 1 cut(s) 608
EcoRII CCWGG 2 cut(s) 228, 527
EcoT14I CCWWGG 1 cut(s) 774
EcoT38I GRGCYC 1 cut(s) 210
ErhI CCWWGG 1 cut(s) 774
FaqI GGGAC 2 cut(s) 20, 963
FblI GTMKAC 1 cut(s) 315
Fnu4HI GCNGC 4 cut(s) 252, 303, 903, 1083
FokI GGATG 1 cut(s) 767
FriOI GRGCYC 1 cut(s) 210
Fsp4HI GCNGC 4 cut(s) 252, 303, 903, 1083
GlaI GCGC 1 cut(s) 323
GluI GCNGC 4 cut(s) 252, 303, 903, 1083
GsaI CCCAGC 1 cut(s) 909
HaeIII GGCC 5 cut(s) 74, 380, 417, 773, 1024
HapII CCGG 2 cut(s) 336, 508
HhaI GCGC 1 cut(s) 324
Hin6I GCGC 1 cut(s) 322
HinP1I GCGC 1 cut(s) 322
HinfI GANTC 6 cut(s) 83, 121, 392, 512, 722, 951
HpaII CCGG 2 cut(s) 336, 508
HphI GGTGA 4 cut(s) 250, 760, 1060, 1126
Hpy166II GTNNAC 3 cut(s) 316, 696, 704
Hpy188I TCNGA 3 cut(s) 88, 226, 400
Hpy188III TCNNGA 4 cut(s) 43, 715, 878, 1201
Hpy8I GTNNAC 3 cut(s) 316, 696, 704
Hpy99I CGWCG 2 cut(s) 185, 197
HpyAV CCTTC 3 cut(s) 745, 1188, 1219
HpyCH4III ACNGT 2 cut(s) 937, 1045
HpyCH4IV ACGT 2 cut(s) 246, 849
HpyCH4V TGCA 4 cut(s) 696, 764, 834, 1064
HpyF10VI GCNNNNNNNGC 5 cut(s) 214, 693, 770, 881, 911
HpyF3I CTNAG 3 cut(s) 87, 1086, 1218
HpySE526I ACGT 2 cut(s) 246, 849
HspAI GCGC 1 cut(s) 322
Kzo9I GATC 3 cut(s) 294, 640, 864
LguI GCTCTTC 1 cut(s) 686
LmnI GCTCC 1 cut(s) 639
Lsp1109I GCAGC 4 cut(s) 238, 289, 889, 1094
LweI GCATC 1 cut(s) 484
MaeII ACGT 2 cut(s) 246, 849
MaeIII GTNAC 1 cut(s) 385
MalI GATC 3 cut(s) 296, 642, 866
MboI GATC 3 cut(s) 294, 640, 864
MboII GAAGA 5 cut(s) 387, 631, 673, 742, 1185
MhlI GDGCHC 3 cut(s) 210, 698, 877
MluCI AATT 4 cut(s) 22, 110, 166, 406
MlyI GAGTC 5 cut(s) 77, 386, 521, 731, 945
MseI TTAA 6 cut(s) 141, 213, 570, 798, 941, 1166
MslI CAYNNNNRTG 1 cut(s) 1046
MspA1I CMGCKG 2 cut(s) 1085, 1184
MspCI CTTAAG 1 cut(s) 569
MspI CCGG 2 cut(s) 336, 508
MspR9I CCNGG 3 cut(s) 230, 509, 529
Mva1269I GAATGC 1 cut(s) 529
MvaI CCWGG 2 cut(s) 230, 529
MwoI GCNNNNNNNGC 5 cut(s) 214, 693, 770, 881, 911
NciI CCSGG 1 cut(s) 509
NcoI CCATGG 1 cut(s) 774
NdeII GATC 3 cut(s) 294, 640, 864
NspI RCATGY 2 cut(s) 53, 328
OliI CACNNNNGTG 1 cut(s) 1046
PagI TCATGA 1 cut(s) 1200
PciI ACATGT 1 cut(s) 49
PciSI GCTCTTC 1 cut(s) 686
PcsI WCGNNNNNNNCGW 1 cut(s) 189
PctI GAATGC 1 cut(s) 529
PfeI GAWTC 1 cut(s) 121
PinAI ACCGGT 1 cut(s) 335
PkrI GCNGC 4 cut(s) 253, 304, 904, 1084
PleI GAGTC 5 cut(s) 77, 386, 520, 730, 945
PpsI GAGTC 5 cut(s) 77, 386, 520, 730, 945
PscI ACATGT 1 cut(s) 49
PshAI GACNNNNGTC 1 cut(s) 848
Psp124BI GAGCTC 1 cut(s) 210
Psp6I CCWGG 2 cut(s) 228, 527
PspFI CCCAGC 1 cut(s) 905
PspGI CCWGG 2 cut(s) 228, 527
PspPI GGNCC 2 cut(s) 379, 1023
PvuII CAGCTG 2 cut(s) 1085, 1184
RsaI GTAC 2 cut(s) 237, 737
RsaNI GTAC 2 cut(s) 236, 736
RseI CAYNNNNRTG 1 cut(s) 1046
SacI GAGCTC 1 cut(s) 210
SapI GCTCTTC 1 cut(s) 686
SaqAI TTAA 6 cut(s) 141, 213, 570, 798, 941, 1166
SatI GCNGC 4 cut(s) 252, 303, 903, 1083
Sau3AI GATC 3 cut(s) 294, 640, 864
Sau96I GGNCC 2 cut(s) 379, 1023
SchI GAGTC 5 cut(s) 77, 386, 521, 731, 945
ScrFI CCNGG 3 cut(s) 230, 509, 529
SduI GDGCHC 3 cut(s) 210, 698, 877
SfaNI GCATC 1 cut(s) 484
SgrAI CRCCGGYG 1 cut(s) 335
SmiMI CAYNNNNRTG 1 cut(s) 1046
SmlI CTYRAG 6 cut(s) 41, 308, 539, 569, 878, 998
SmoI CTYRAG 6 cut(s) 41, 308, 539, 569, 878, 998
Sse9I AATT 4 cut(s) 22, 110, 166, 406
SsiI CCGC 1 cut(s) 685
SspI AATATT 1 cut(s) 162
SstI GAGCTC 1 cut(s) 210
StyD4I CCNGG 3 cut(s) 228, 507, 527
StyI CCWWGG 1 cut(s) 774
TaaI ACNGT 2 cut(s) 937, 1045
TaiI ACGT 2 cut(s) 249, 852
TaqI TCGA 1 cut(s) 192
TasI AATT 4 cut(s) 22, 110, 166, 406
TatI WGTACW 1 cut(s) 735
TfiI GAWTC 1 cut(s) 121
Tru1I TTAA 6 cut(s) 141, 213, 570, 798, 941, 1166
Tru9I TTAA 6 cut(s) 141, 213, 570, 798, 941, 1166
TscAI CASTG 3 cut(s) 16, 706, 1048
TseI GCWGC 4 cut(s) 251, 302, 902, 1082
TspDTI ATGAA 4 cut(s) 632, 743, 784, 1217
TspRI CASTG 3 cut(s) 16, 706, 1048
Vha464I CTTAAG 1 cut(s) 569
VneI GTGCAC 1 cut(s) 694
XagI CCTNNNNNAGG 1 cut(s) 608
XapI RAATTY 1 cut(s) 110
XceI RCATGY 2 cut(s) 53, 328
XmiI GTMKAC 1 cut(s) 315
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.