FvH4_6g24050

Cell division cycle protein 48 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000153
Physical Location & Seq
Forward (+)
18066193 .. 18068538
2346 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g24050.t2

Sequence Viewer

Length: 1155 bp
ATGCAAGTATGCATGGGGATAATGATTCTGGTGCTAGTGGGGAAGGAACCAGCGATGACGACAACCAAACAAAATCTTTTGAAGGCAAGGACTTTGAGGACGACGAAGAGCAACTCGACTGCAACTCCAATTGAAGGGAGTAACTCTCATAGTACTGCTGTTTCAATGGAGGATTATGAGCATGGTGTTAGCGGGGATAACAACGTTGATGCTCAGGAGAGGGAACCTGCTATAAATGTCGTTGTTTATGAAGATAACTGCGGTGAGCAGGCATGCAAGGCTGTGGAAACTTGCCATGGTGTTGATACTCAGGTGAATGAACCTGCTGTAAATTTTGGTGTCTGTGGAGATAACTGCGGTGAGCAGGGTGAATCAGGTGAGGTCTTGTTGGAAACTGGAGGAACTATGCGCAGGGATAACAATATTGATGCTGCAGCCTTGGTAAATAGAGAGGTTCCTTCCTGCACCACTTCAACTATTTCTTCCACTCTTGATTCCGACAAGGCAGGGAATGATTCGCCGACTGATTTCGAGGCGCGATTCAGAGATTTTGTTGCTTGCTTTGATGCTAAGGACAGCTTGAGCATTACTGTTGATAGTATTACAAAACCGCTGAGTGGTAATCAATCTCCCTTCGAAGGTGGAATGGTTCCTTCGGAGTTTGTGGTTCCGCTGACCAAATTTGCTCAAAAGTATGGTGGAGGTAGTTTTTCTAGCTTGTTTGCTGAGGGGAAAAGTACTTATCAGAAACATACTTTAGTTGAAAGATTTGGTCTGCAATTGTTTAGTATGGAAGTTGAGGAAGTGAAGCATGAGGGGAAATTTTTGGTTTGGAGAGATCTATGTCATGATGTTGTAGATTGGGGACTCAAAGTTGGCTTCATGTTTGATCATCTGAAGCAAGCTGCCAGGAGCTTTTTCGGATACAAACTCAAGCCTGCTGGTTCAGACAACTACTGCAAGGAGGTTCTCCAGTTGGAAAAATCTGTACTTGAGCTGAGACGTGAGCTTGTGCGTCTTGAAAAGCAACTGGGCAAAGCACGAGAGGGCCTCTGCAGCAAATTCGGCAATGTTATTTGCCCTGATGATGTCATGGCTTGTATTTTGGAGTCCTCTTGGACTCCTCAAAGCCGCGCAACTCATGGCTTGTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 ko05134 map04141 map05134
Pfam Domains
Protein Families
CDC48_2 CDC48_N Vps4_C

Protein Analysis

385

Amino Acids

42.07

Weight (kDa)

5.08

Isoelectric Point (pI)

40.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 410
Acc36I ACCTGC 2 cut(s) 235, 331
AccII CGCG 2 cut(s) 538, 1134
AciI CCGC 6 cut(s) 192, 261, 357, 611, 671, 1132
AclI AACGTT 1 cut(s) 204
AcsI RAATTY 4 cut(s) 331, 680, 821, 1061
AcuI CTGAAG 1 cut(s) 917
AfaI GTAC 3 cut(s) 154, 739, 990
AfiI CCNNNNNNNGG 3 cut(s) 134, 617, 638
AgsI TTSAA 6 cut(s) 82, 134, 165, 474, 764, 1022
AjiI CACGTC 1 cut(s) 1004
AjnI CCWGG 1 cut(s) 908
AluBI AGCT 6 cut(s) 579, 717, 905, 915, 997, 1009
AluI AGCT 6 cut(s) 579, 717, 905, 915, 997, 1009
Alw26I GTCTC 1 cut(s) 994
AoxI GGCC 1 cut(s) 1048
ApeKI GCWGC 4 cut(s) 431, 434, 905, 1056
ApoI RAATTY 4 cut(s) 331, 680, 821, 1061
AspLEI GCGC 3 cut(s) 411, 538, 1136
AspS9I GGNCC 1 cut(s) 1048
AsuHPI GGTGA 5 cut(s) 275, 325, 371, 380, 389
AsuII TTCGAA 1 cut(s) 636
BaeI ACNNNNGTAYC 2 cut(s) 297, 330
BauI CACGAG 1 cut(s) 1041
BbvCI CCTCAGC 1 cut(s) 726
BbvI GCAGC 4 cut(s) 418, 446, 892, 1068
BcgI CGANNNNNNTGC 2 cut(s) 1045, 1079
BciT130I CCWGG 1 cut(s) 910
BciVI GTATCC 1 cut(s) 917
BclI TGATCA 1 cut(s) 889
BcoDI GTCTC 1 cut(s) 994
BfaI CTAG 2 cut(s) 35, 714
BfmI CTRYAG 2 cut(s) 432, 1054
BfuAI ACCTGC 2 cut(s) 235, 331
BfuI GTATCC 1 cut(s) 917
BglII AGATCT 1 cut(s) 838
BisI GCNGC 5 cut(s) 432, 435, 906, 1057, 1132
BlsI GCNGC 5 cut(s) 433, 436, 907, 1058, 1133
BmcAI AGTACT 2 cut(s) 154, 739
Bme1390I CCNGG 1 cut(s) 910
BmgBI CACGTC 1 cut(s) 1004
BmgT120I GGNCC 1 cut(s) 1048
BmiI GGNNCC 5 cut(s) 48, 225, 456, 651, 669
BmrFI CCNGG 1 cut(s) 910
BmrI ACTGGG 1 cut(s) 1040
BmsI GCATC 3 cut(s) 199, 418, 556
BmuI ACTGGG 1 cut(s) 1040
BplI GAGNNNNNCTC 4 cut(s) 130, 162, 1035, 1067
BpmI CTGGAG 2 cut(s) 417, 956
Bpu10I CCTNAGC 3 cut(s) 213, 570, 726
Bpu14I TTCGAA 1 cut(s) 636
BpuEI CTTGAG 3 cut(s) 601, 917, 1013
BsaJI CCNNGG 2 cut(s) 295, 438
BsaXI ACNNNNNCTCC 2 cut(s) 109, 139
Bsc4I CCNNNNNNNGG 3 cut(s) 134, 617, 638
Bse1I ACTGG 3 cut(s) 400, 973, 1035
Bse3DI GCAATG 1 cut(s) 1075
BseBI CCWGG 1 cut(s) 910
BseDI CCNNGG 2 cut(s) 295, 438
BseLI CCNNNNNNNGG 3 cut(s) 134, 617, 638
BseMI GCAATG 1 cut(s) 1075
BseMII CTCAG 5 cut(s) 227, 323, 605, 717, 989
BseNI ACTGG 3 cut(s) 400, 973, 1035
BseRI GAGGAG 1 cut(s) 1113
BseXI GCAGC 4 cut(s) 418, 446, 892, 1068
BsgI GTGCAG 1 cut(s) 448
Bsh1236I CGCG 2 cut(s) 538, 1134
BshFI GGCC 1 cut(s) 1050
BslFI GGGAC 1 cut(s) 879
BslI CCNNNNNNNGG 3 cut(s) 134, 617, 638
BsmAI GTCTC 1 cut(s) 994
BsmBI CGTCTC 1 cut(s) 994
BsmFI GGGAC 1 cut(s) 879
BsnI GGCC 1 cut(s) 1050
Bsp119I TTCGAA 1 cut(s) 636
Bsp143I GATC 2 cut(s) 838, 889
Bsp19I CCATGG 1 cut(s) 295
BspACI CCGC 6 cut(s) 192, 261, 357, 611, 671, 1132
BspANI GGCC 1 cut(s) 1050
BspCNI CTCAG 5 cut(s) 226, 322, 606, 718, 990
BspFNI CGCG 2 cut(s) 538, 1134
BspHI TCATGA 1 cut(s) 847
BspLI GGNNCC 5 cut(s) 48, 225, 456, 651, 669
BspMAI CTGCAG 2 cut(s) 436, 1058
BspMI ACCTGC 2 cut(s) 235, 331
BspQI GCTCTTC 1 cut(s) 101
BspT104I TTCGAA 1 cut(s) 636
BsrDI GCAATG 1 cut(s) 1075
BsrI ACTGG 3 cut(s) 400, 973, 1035
BssECI CCNNGG 2 cut(s) 295, 438
BssMI GATC 2 cut(s) 838, 889
BssSI CACGAG 1 cut(s) 1041
BssT1I CCWWGG 2 cut(s) 295, 438
Bst2BI CACGAG 1 cut(s) 1041
Bst2UI CCWGG 1 cut(s) 910
Bst4CI ACNGT 1 cut(s) 592
Bst6I CTCTTC 1 cut(s) 101
BstBI TTCGAA 1 cut(s) 636
BstC8I GCNNGC 5 cut(s) 270, 274, 559, 903, 939
BstDEI CTNAG 6 cut(s) 213, 309, 570, 614, 726, 998
BstDSI CCRYGG 1 cut(s) 295
BstFNI CGCG 2 cut(s) 538, 1134
BstHHI GCGC 3 cut(s) 411, 538, 1136
BstKTI GATC 2 cut(s) 841, 892
BstMAI GTCTC 1 cut(s) 994
BstMBI GATC 2 cut(s) 838, 889
BstMWI GCNNNNNNNGC 3 cut(s) 278, 1056, 1065
BstNI CCWGG 1 cut(s) 910
BstNSI RCATGY 1 cut(s) 276
BstSCI CCNGG 1 cut(s) 908
BstSFI CTRYAG 2 cut(s) 432, 1054
BstUI CGCG 2 cut(s) 538, 1134
BstV1I GCAGC 4 cut(s) 418, 446, 892, 1068
BstX2I RGATCY 1 cut(s) 838
BstYI RGATCY 1 cut(s) 838
BsuI GTATCC 1 cut(s) 917
BsuRI GGCC 1 cut(s) 1050
BtgI CCRYGG 1 cut(s) 295
BtgZI GCGATG 1 cut(s) 68
BtrI CACGTC 1 cut(s) 1004
BveI ACCTGC 2 cut(s) 235, 331
Cac8I GCNNGC 5 cut(s) 270, 274, 559, 903, 939
CciI TCATGA 1 cut(s) 847
CfoI GCGC 3 cut(s) 411, 538, 1136
Cfr13I GGNCC 1 cut(s) 1048
CseI GACGC 1 cut(s) 1004
Csp6I GTAC 3 cut(s) 153, 738, 989
CviAII CATG 9 cut(s) 13, 182, 273, 296, 812, 848, 883, 1093, 1142
CviQI GTAC 3 cut(s) 153, 738, 989
DdeI CTNAG 6 cut(s) 213, 309, 570, 614, 726, 998
DpnI GATC 2 cut(s) 840, 891
DpnII GATC 2 cut(s) 838, 889
Eam1104I CTCTTC 1 cut(s) 101
EarI CTCTTC 1 cut(s) 101
Eco130I CCWWGG 2 cut(s) 295, 438
Eco57I CTGAAG 1 cut(s) 917
EcoO109I RGGNCCY 1 cut(s) 1048
EcoRII CCWGG 1 cut(s) 908
EcoT14I CCWWGG 2 cut(s) 295, 438
EcoT22I ATGCAT 1 cut(s) 14
ErhI CCWWGG 2 cut(s) 295, 438
Esp3I CGTCTC 1 cut(s) 994
FaeI CATG 9 cut(s) 16, 185, 276, 299, 815, 851, 886, 1096, 1145
FalI AAGNNNNNCTT 2 cut(s) 563, 595
FaqI GGGAC 1 cut(s) 879
FatI CATG 9 cut(s) 12, 181, 272, 295, 811, 847, 882, 1092, 1141
FauI CCCGC 1 cut(s) 185
FbaI TGATCA 1 cut(s) 889
Fnu4HI GCNGC 5 cut(s) 432, 435, 906, 1057, 1132
Fsp4HI GCNGC 5 cut(s) 432, 435, 906, 1057, 1132
FspBI CTAG 2 cut(s) 35, 714
FspI TGCGCA 1 cut(s) 410
GlaI GCGC 3 cut(s) 410, 537, 1135
GluI GCNGC 5 cut(s) 432, 435, 906, 1057, 1132
GsuI CTGGAG 2 cut(s) 417, 956
HaeIII GGCC 1 cut(s) 1050
HgaI GACGC 1 cut(s) 1004
HhaI GCGC 3 cut(s) 411, 538, 1136
Hin1II CATG 9 cut(s) 16, 185, 276, 299, 815, 851, 886, 1096, 1145
Hin6I GCGC 3 cut(s) 409, 536, 1134
HinP1I GCGC 3 cut(s) 409, 536, 1134
HinfI GANTC 8 cut(s) 25, 371, 494, 515, 540, 867, 1109, 1120
HphI GGTGA 5 cut(s) 275, 325, 371, 380, 389
Hpy188I TCNGA 7 cut(s) 499, 545, 658, 747, 897, 923, 949
Hpy188III TCNNGA 4 cut(s) 215, 491, 848, 1019
Hpy99I CGWCG 1 cut(s) 106
HpyAV CCTTC 7 cut(s) 37, 76, 128, 468, 632, 643, 663
HpyCH4III ACNGT 1 cut(s) 592
HpyCH4IV ACGT 2 cut(s) 204, 1003
HpyCH4V TGCA 9 cut(s) 4, 12, 122, 276, 434, 465, 778, 960, 1056
HpyF10VI GCNNNNNNNGC 3 cut(s) 278, 1056, 1065
HpyF3I CTNAG 6 cut(s) 213, 309, 570, 614, 726, 998
HpySE526I ACGT 2 cut(s) 204, 1003
Hsp92II CATG 9 cut(s) 16, 185, 276, 299, 815, 851, 886, 1096, 1145
HspAI GCGC 3 cut(s) 409, 536, 1134
Ksp22I TGATCA 1 cut(s) 889
Kzo9I GATC 2 cut(s) 838, 889
LguI GCTCTTC 1 cut(s) 101
LmnI GCTCC 1 cut(s) 912
Lsp1109I GCAGC 4 cut(s) 418, 446, 892, 1068
LweI GCATC 3 cut(s) 199, 418, 556
MaeI CTAG 2 cut(s) 35, 714
MaeII ACGT 2 cut(s) 204, 1003
MaeIII GTNAC 1 cut(s) 140
MalI GATC 2 cut(s) 840, 891
MboI GATC 2 cut(s) 838, 889
MboII GAAGA 3 cut(s) 118, 263, 474
MfeI CAATTG 2 cut(s) 129, 779
MflI RGATCY 1 cut(s) 838
MluCI AATT 6 cut(s) 129, 331, 680, 779, 821, 1061
MlyI GAGTC 3 cut(s) 861, 1114, 1118
MmeI TCCRAC 3 cut(s) 369, 522, 957
Mph1103I ATGCAT 1 cut(s) 14
MspA1I CMGCKG 2 cut(s) 613, 673
MspR9I CCNGG 1 cut(s) 910
MunI CAATTG 2 cut(s) 129, 779
MvaI CCWGG 1 cut(s) 910
MvnI CGCG 2 cut(s) 538, 1134
MwoI GCNNNNNNNGC 3 cut(s) 278, 1056, 1065
NcoI CCATGG 1 cut(s) 295
NdeII GATC 2 cut(s) 838, 889
NlaIII CATG 9 cut(s) 16, 185, 276, 299, 815, 851, 886, 1096, 1145
NlaIV GGNNCC 5 cut(s) 48, 225, 456, 651, 669
NsbI TGCGCA 1 cut(s) 410
NsiI ATGCAT 1 cut(s) 14
NspI RCATGY 1 cut(s) 276
NspV TTCGAA 1 cut(s) 636
PaeI GCATGC 1 cut(s) 276
PagI TCATGA 1 cut(s) 847
PciSI GCTCTTC 1 cut(s) 101
PfeI GAWTC 5 cut(s) 25, 371, 494, 515, 540
PkrI GCNGC 5 cut(s) 433, 436, 907, 1058, 1133
PleI GAGTC 3 cut(s) 861, 1114, 1117
PpsI GAGTC 3 cut(s) 861, 1114, 1117
Psp1406I AACGTT 1 cut(s) 204
Psp6I CCWGG 1 cut(s) 908
PspGI CCWGG 1 cut(s) 908
PspN4I GGNNCC 5 cut(s) 48, 225, 456, 651, 669
PspPI GGNCC 1 cut(s) 1048
PstI CTGCAG 2 cut(s) 436, 1058
PsuI RGATCY 1 cut(s) 838
RsaI GTAC 3 cut(s) 154, 739, 990
RsaNI GTAC 3 cut(s) 153, 738, 989
SapI GCTCTTC 1 cut(s) 101
SatI GCNGC 5 cut(s) 432, 435, 906, 1057, 1132
Sau3AI GATC 2 cut(s) 838, 889
Sau96I GGNCC 1 cut(s) 1048
ScaI AGTACT 2 cut(s) 154, 739
SchI GAGTC 3 cut(s) 861, 1114, 1118
ScrFI CCNGG 1 cut(s) 910
SfaNI GCATC 3 cut(s) 199, 418, 556
SfcI CTRYAG 2 cut(s) 432, 1054
SfuI TTCGAA 1 cut(s) 636
SmlI CTYRAG 3 cut(s) 580, 932, 992
SmoI CTYRAG 3 cut(s) 580, 932, 992
SphI GCATGC 1 cut(s) 276
Sse9I AATT 6 cut(s) 129, 331, 680, 779, 821, 1061
SsiI CCGC 6 cut(s) 192, 261, 357, 611, 671, 1132
SspI AATATT 1 cut(s) 424
SspMI CTAG 2 cut(s) 35, 714
StyD4I CCNGG 1 cut(s) 908
StyI CCWWGG 2 cut(s) 295, 438
TaaI ACNGT 1 cut(s) 592
TaiI ACGT 2 cut(s) 207, 1006
TaqI TCGA 3 cut(s) 116, 531, 636
TasI AATT 6 cut(s) 129, 331, 680, 779, 821, 1061
TatI WGTACW 3 cut(s) 152, 737, 988
TauI GCSGC 1 cut(s) 1134
TfiI GAWTC 5 cut(s) 25, 371, 494, 515, 540
TseI GCWGC 4 cut(s) 431, 434, 905, 1056
TspDTI ATGAA 3 cut(s) 264, 333, 871
XapI RAATTY 4 cut(s) 331, 680, 821, 1061
XceI RCATGY 1 cut(s) 276
XspI CTAG 2 cut(s) 35, 714
ZrmI AGTACT 2 cut(s) 154, 739
Zsp2I ATGCAT 1 cut(s) 14
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.