Rmu_sc0006139.1_g000006

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006139.1
OG0000153
Physical Location & Seq
Reverse (-)
14298 .. 19702
5405 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006139.1_g000006.1.cds

Sequence Viewer

Length: 1857 bp
atggctcaagcgtctgagtcttcccagcctattgaacttcaggaccaccacttatctctggaggatggtctcattcctacttccaccgcggggggttatgaaagtagctcagatgaggcatctcatgaattttctgagcactttgtttctcccaagttcatatccagcttcgaggtacaacaggaagagtttgaagaggcccttgttggagctggagtgaagatttcactgtttatttctggcttttgtgaggtttacaaagatgacatttgccttcgccatgtggtgcgaagatggaggtttattcagactggtgggactaggttgtgtccgaaagccaatagtgagaacaagagactactccacagtaacactgtcttgggtgtcatgtctagacttaaccttccctatactgaggtatatgcgaatggcatgaagtgggtggttggtcatctcaagggtggcaaagatggaggtgattccgaagtagagttgccagctgctagaatggagaagagtggcaagagcgtaacaaagggtaaagtcagggctttcgagggtagagaagaaagtaaaaggaaagtttgccgctacaaacctaagttggcaaaggatcacatccctcctccagtaatcaagagtgcctttggtgtcaaagtgatactgccatcgagtttggctggtgaaaaagggaagaagaggaaagctgcttctaccttgagaccgcgtggggttactaagagaaaggttacagatgatgcctcacctgctgtcctcatgcgaagctctcgcgttgctaacatgagtttttctaaacctaaaccgtcgtctaagggcgctgctcatgttgatcttagtgacgtgccaagtgacgacatcgaaggtagcccccttagtgataatgtggaatcccttggagatgaggatgatcagggtaatccaaacgtagctttaatggaagaggatagctgcgatacttgcttctttgcatgttacatgttgctacatgaccttgaggttgagttgttgcctcgcagggagctcatgctgctatctcgatggagaatcacgagcataatgttagtggctggtgctggtgctctaatgaaggaatctgctgtaaatgtcggtcttggtgtagataatcgtaacaagcagggtggatcatttttgttgacagttggagggacatcatttgagccccatctccctgagacagtactgggggacgaaggcattactgctgcaatcttggtcagtataggggtttcgctgtgcgttgcctccgcttgttctcttgctcgtagctcaaataaatcagaaagggtgtcaaaagctgatttagagatgcggtttaggaagtttattgcttattttgacaatgaggatcgcttgagtatcactattgatgatattgcatgcccattgagcggtatccgatcttcatttgagggtgggaaagttccttcagatttctgccttaaagtctgggaaatcagagcttacttgagaaatggagttttgggacaaggagaagatcattgtagccgtgggtggaggttacagcagagacagctgcagtggcacgaaacctggaacgaggttgatagggaggcttgggaggagctgcagggaaaaggaaaagaagatagaagaaagacggtgaaagctgggctatcctatttcttttgggtttggacttttctttgggctttgggttttgaggaaaaagggttgacccaaattctacattcaccaattcgctatcgatttaaattacggagcttggatctcaagcccaagatcgagaccaccgacgatgctaaatcaatagaagggcgtagtgtgtttccgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

618

Amino Acids

68.64

Weight (kDa)

7.21

Isoelectric Point (pI)

51.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 775
Acc36I ACCTGC 1 cut(s) 775
AccBSI CCGCTC 1 cut(s) 1431
AccII CGCG 3 cut(s) 89, 727, 792
AciI CCGC 7 cut(s) 87, 89, 589, 725, 1287, 1351, 1431
AclWI GGATC 4 cut(s) 621, 1171, 1395, 1797
AcsI RAATTY 2 cut(s) 128, 1743
AcuI CTGAAG 2 cut(s) 23, 1452
AfaI GTAC 2 cut(s) 177, 1221
AfiI CCNNNNNNNGG 2 cut(s) 90, 1430
AflIII ACRYGT 1 cut(s) 996
AgsI TTSAA 2 cut(s) 35, 194
AjiI CACGTC 1 cut(s) 862
AjnI CCWGG 1 cut(s) 1592
Alw21I GWGCWC 3 cut(s) 141, 1044, 1102
Alw26I GTCTC 6 cut(s) 74, 349, 715, 1208, 1564, 1802
AlwI GGATC 4 cut(s) 621, 1171, 1395, 1797
AoxI GGCC 1 cut(s) 198
ApeKI GCWGC 8 cut(s) 500, 707, 839, 969, 1048, 1244, 1576, 1627
ApoI RAATTY 2 cut(s) 128, 1743
AspLEI GCGC 1 cut(s) 839
AspS9I GGNCC 2 cut(s) 43, 199
AsuHPI GGTGA 5 cut(s) 488, 695, 756, 1675, 1746
AvaII GGWCC 1 cut(s) 43
BanII GRGCYC 2 cut(s) 1044, 1203
BarI GAAGNNNNNNTAC 2 cut(s) 1426, 1458
BauI CACGAG 1 cut(s) 1069
BbsI GAAGAC 1 cut(s) 12
Bbv12I GWGCWC 3 cut(s) 141, 1044, 1102
BbvI GCAGC 8 cut(s) 487, 694, 826, 956, 1035, 1231, 1563, 1614
BccI CCATC 6 cut(s) 59, 288, 464, 676, 1053, 1212
BceAI ACGGC 1 cut(s) 1533
BciT130I CCWGG 1 cut(s) 1594
BciVI GTATCC 1 cut(s) 1445
BclI TGATCA 1 cut(s) 928
BcoDI GTCTC 6 cut(s) 74, 349, 715, 1208, 1564, 1802
BfaI CTAG 3 cut(s) 321, 393, 504
BfmI CTRYAG 2 cut(s) 1577, 1628
BfoI RGCGCY 1 cut(s) 840
BfuAI ACCTGC 1 cut(s) 775
BfuI GTATCC 1 cut(s) 1445
BisI GCNGC 9 cut(s) 501, 589, 708, 840, 970, 1049, 1245, 1577, 1628
BlsI GCNGC 9 cut(s) 502, 590, 709, 841, 971, 1050, 1246, 1578, 1629
BmcAI AGTACT 1 cut(s) 1221
Bme1390I CCNGG 1 cut(s) 1594
Bme18I GGWCC 1 cut(s) 43
BmgBI CACGTC 1 cut(s) 862
BmgT120I GGNCC 2 cut(s) 43, 199
BmrFI CCNGG 1 cut(s) 1594
BmrI ACTGGG 1 cut(s) 1232
BmsI GCATC 4 cut(s) 128, 748, 1338, 1810
BmuI ACTGGG 1 cut(s) 1232
BpiI GAAGAC 1 cut(s) 12
BpmI CTGGAG 3 cut(s) 80, 234, 612
BpuEI CTTGAG 6 cut(s) 440, 739, 1034, 1414, 1528, 1778
Bsa29I ATCGAT 1 cut(s) 1768
BsaI GGTCTC 3 cut(s) 74, 715, 1802
BsaJI CCNNGG 3 cut(s) 87, 913, 1549
BsaXI ACNNNNNCTCC 2 cut(s) 201, 231
Bsc4I CCNNNNNNNGG 2 cut(s) 90, 1430
Bse1I ACTGG 3 cut(s) 316, 629, 1227
BseBI CCWGG 1 cut(s) 1594
BseCI ATCGAT 1 cut(s) 1768
BseDI CCNNGG 3 cut(s) 87, 913, 1549
BseGI GGATG 3 cut(s) 70, 618, 931
BseLI CCNNNNNNNGG 2 cut(s) 90, 1430
BseMII CTCAG 5 cut(s) 6, 123, 126, 405, 1203
BseNI ACTGG 3 cut(s) 316, 629, 1227
BseRI GAGGAG 2 cut(s) 615, 1637
BseXI GCAGC 8 cut(s) 487, 694, 826, 956, 1035, 1231, 1563, 1614
BseYI CCCAGC 2 cut(s) 24, 1670
Bsh1236I CGCG 3 cut(s) 89, 727, 792
BshFI GGCC 1 cut(s) 200
BshVI ATCGAT 1 cut(s) 1768
BsiHKAI GWGCWC 3 cut(s) 141, 1044, 1102
BslFI GGGAC 4 cut(s) 331, 1201, 1241, 1539
BslI CCNNNNNNNGG 2 cut(s) 90, 1430
BsmAI GTCTC 6 cut(s) 74, 349, 715, 1208, 1564, 1802
BsmFI GGGAC 4 cut(s) 331, 1201, 1241, 1539
BsnI GGCC 1 cut(s) 200
Bso31I GGTCTC 3 cut(s) 74, 715, 1802
Bsp1286I GDGCHC 4 cut(s) 141, 1044, 1102, 1203
Bsp143I GATC 9 cut(s) 613, 850, 928, 1163, 1387, 1439, 1537, 1789, 1803
BspACI CCGC 7 cut(s) 87, 89, 589, 725, 1287, 1351, 1431
BspANI GGCC 1 cut(s) 200
BspCNI CTCAG 5 cut(s) 7, 122, 127, 406, 1204
BspDI ATCGAT 1 cut(s) 1768
BspFNI CGCG 3 cut(s) 89, 727, 792
BspHI TCATGA 1 cut(s) 124
BspMAI CTGCAG 2 cut(s) 1581, 1632
BspMI ACCTGC 1 cut(s) 775
BspPI GGATC 4 cut(s) 621, 1171, 1395, 1797
BspTNI GGTCTC 3 cut(s) 74, 715, 1802
BsrBI CCGCTC 1 cut(s) 1431
BsrI ACTGG 3 cut(s) 316, 629, 1227
BssECI CCNNGG 3 cut(s) 87, 913, 1549
BssMI GATC 9 cut(s) 613, 850, 928, 1163, 1387, 1439, 1537, 1789, 1803
BssSI CACGAG 1 cut(s) 1069
BssT1I CCWWGG 1 cut(s) 913
Bst2BI CACGAG 1 cut(s) 1069
Bst2UI CCWGG 1 cut(s) 1594
Bst4CI ACNGT 7 cut(s) 231, 368, 376, 825, 1180, 1219, 1663
Bst6I CTCTTC 5 cut(s) 180, 189, 509, 692, 954
BstC8I GCNNGC 2 cut(s) 498, 1420
BstDSI CCRYGG 2 cut(s) 87, 1549
BstF5I GGATG 3 cut(s) 70, 618, 931
BstFNI CGCG 3 cut(s) 89, 727, 792
BstH2I RGCGCY 1 cut(s) 840
BstHHI GCGC 1 cut(s) 839
BstKTI GATC 9 cut(s) 616, 853, 931, 1166, 1390, 1442, 1540, 1792, 1806
BstMAI GTCTC 6 cut(s) 74, 349, 715, 1208, 1564, 1802
BstMBI GATC 9 cut(s) 613, 850, 928, 1163, 1387, 1439, 1537, 1789, 1803
BstMWI GCNNNNNNNGC 6 cut(s) 767, 978, 1048, 1428, 1573, 1582
BstNI CCWGG 1 cut(s) 1594
BstNSI RCATGY 3 cut(s) 993, 1000, 1422
BstSCI CCNGG 1 cut(s) 1592
BstSFI CTRYAG 2 cut(s) 1577, 1628
BstUI CGCG 3 cut(s) 89, 727, 792
BstV1I GCAGC 8 cut(s) 487, 694, 826, 956, 1035, 1231, 1563, 1614
BstV2I GAAGAC 1 cut(s) 12
BstX2I RGATCY 1 cut(s) 1789
BstYI RGATCY 1 cut(s) 1789
Bsu15I ATCGAT 1 cut(s) 1768
BsuI GTATCC 1 cut(s) 1445
BsuRI GGCC 1 cut(s) 200
BsuTUI ATCGAT 1 cut(s) 1768
BtgI CCRYGG 2 cut(s) 87, 1549
BtrI CACGTC 1 cut(s) 862
BtsCI GGATG 3 cut(s) 70, 618, 931
BtsI GCAGTG 1 cut(s) 1586
BtsIMutI CAGTG 3 cut(s) 227, 372, 1586
BveI ACCTGC 1 cut(s) 775
Cac8I GCNNGC 2 cut(s) 498, 1420
CciI TCATGA 1 cut(s) 124
CfoI GCGC 1 cut(s) 839
Cfr13I GGNCC 2 cut(s) 43, 199
Cfr42I CCGCGG 1 cut(s) 90
ClaI ATCGAT 1 cut(s) 1768
Csp6I GTAC 2 cut(s) 176, 1220
CspCI CAANNNNNGTGG 2 cut(s) 1141, 1176
CviQI GTAC 2 cut(s) 176, 1220
DpnI GATC 9 cut(s) 615, 852, 930, 1165, 1389, 1441, 1539, 1791, 1805
DpnII GATC 9 cut(s) 613, 850, 928, 1163, 1387, 1439, 1537, 1789, 1803
DraI TTTAAA 1 cut(s) 1774
Eam1104I CTCTTC 5 cut(s) 180, 189, 509, 692, 954
EarI CTCTTC 5 cut(s) 180, 189, 509, 692, 954
Ecl136II GAGCTC 1 cut(s) 1042
Eco130I CCWWGG 1 cut(s) 913
Eco24I GRGCYC 2 cut(s) 1044, 1203
Eco31I GGTCTC 3 cut(s) 74, 715, 1802
Eco47I GGWCC 1 cut(s) 43
Eco53kI GAGCTC 1 cut(s) 1042
Eco57I CTGAAG 2 cut(s) 23, 1452
EcoICRI GAGCTC 1 cut(s) 1042
EcoO109I RGGNCCY 1 cut(s) 199
EcoRII CCWGG 1 cut(s) 1592
EcoT14I CCWWGG 1 cut(s) 913
EcoT38I GRGCYC 2 cut(s) 1044, 1203
ErhI CCWWGG 1 cut(s) 913
FalI AAGNNNNNCTT 4 cut(s) 186, 218, 629, 661
FaqI GGGAC 4 cut(s) 331, 1201, 1241, 1539
FauI CCCGC 1 cut(s) 82
FbaI TGATCA 1 cut(s) 928
Fnu4HI GCNGC 9 cut(s) 501, 589, 708, 840, 970, 1049, 1245, 1577, 1628
FokI GGATG 3 cut(s) 77, 605, 938
FriOI GRGCYC 2 cut(s) 1044, 1203
Fsp4HI GCNGC 9 cut(s) 501, 589, 708, 840, 970, 1049, 1245, 1577, 1628
FspBI CTAG 3 cut(s) 321, 393, 504
GlaI GCGC 1 cut(s) 838
GluI GCNGC 9 cut(s) 501, 589, 708, 840, 970, 1049, 1245, 1577, 1628
GsaI CCCAGC 2 cut(s) 28, 1674
GsuI CTGGAG 3 cut(s) 80, 234, 612
HaeII RGCGCY 1 cut(s) 840
HaeIII GGCC 1 cut(s) 200
HhaI GCGC 1 cut(s) 839
Hin6I GCGC 1 cut(s) 837
HinP1I GCGC 1 cut(s) 837
HincII GTYRAC 2 cut(s) 1176, 1737
HindII GTYRAC 2 cut(s) 1176, 1737
HinfI GANTC 5 cut(s) 17, 479, 908, 1065, 1112
HphI GGTGA 5 cut(s) 488, 695, 756, 1675, 1746
Hpy166II GTNNAC 3 cut(s) 256, 1176, 1737
Hpy188III TCNNGA 8 cut(s) 41, 59, 125, 393, 637, 1056, 1069, 1807
Hpy8I GTNNAC 3 cut(s) 256, 1176, 1737
Hpy99I CGWCG 2 cut(s) 829, 1820
HpyAV CCTTC 7 cut(s) 284, 413, 875, 1102, 1226, 1476, 1829
HpyCH4III ACNGT 7 cut(s) 231, 368, 376, 825, 1180, 1219, 1663
HpyCH4IV ACGT 2 cut(s) 861, 945
HpyCH4V TGCA 5 cut(s) 989, 1247, 1418, 1579, 1630
HpyF10VI GCNNNNNNNGC 6 cut(s) 767, 978, 1048, 1428, 1573, 1582
HpySE526I ACGT 2 cut(s) 861, 945
HspAI GCGC 1 cut(s) 837
Ksp22I TGATCA 1 cut(s) 928
KspI CCGCGG 1 cut(s) 90
Kzo9I GATC 9 cut(s) 613, 850, 928, 1163, 1387, 1439, 1537, 1789, 1803
LmnI GCTCC 4 cut(s) 209, 1039, 1624, 1782
Lsp1109I GCAGC 8 cut(s) 487, 694, 826, 956, 1035, 1231, 1563, 1614
LweI GCATC 4 cut(s) 128, 748, 1338, 1810
MaeI CTAG 3 cut(s) 321, 393, 504
MaeII ACGT 2 cut(s) 861, 945
MaeIII GTNAC 9 cut(s) 368, 529, 733, 748, 857, 869, 992, 1148, 1560
MalI GATC 9 cut(s) 615, 852, 930, 1165, 1389, 1441, 1539, 1791, 1805
MbiI CCGCTC 1 cut(s) 1431
MboI GATC 9 cut(s) 613, 850, 928, 1163, 1387, 1439, 1537, 1789, 1803
MflI RGATCY 1 cut(s) 1789
MhlI GDGCHC 4 cut(s) 141, 1044, 1102, 1203
MluCI AATT 4 cut(s) 128, 1743, 1758, 1775
MlyI GAGTC 1 cut(s) 26
MmeI TCCRAC 2 cut(s) 187, 1162
MseI TTAA 4 cut(s) 399, 953, 1482, 1773
MspA1I CMGCKG 3 cut(s) 89, 500, 1576
MspR9I CCNGG 1 cut(s) 1594
MvaI CCWGG 1 cut(s) 1594
MvnI CGCG 3 cut(s) 89, 727, 792
MwoI GCNNNNNNNGC 6 cut(s) 767, 978, 1048, 1428, 1573, 1582
NdeII GATC 9 cut(s) 613, 850, 928, 1163, 1387, 1439, 1537, 1789, 1803
NmuCI GTSAC 2 cut(s) 857, 869
NspI RCATGY 3 cut(s) 993, 1000, 1422
PaeI GCATGC 1 cut(s) 1422
PagI TCATGA 1 cut(s) 124
PaqCI CACCTGC 1 cut(s) 775
PciI ACATGT 1 cut(s) 996
PcsI WCGNNNNNNNCGW 1 cut(s) 1812
PfeI GAWTC 4 cut(s) 479, 908, 1065, 1112
PkrI GCNGC 9 cut(s) 502, 590, 709, 841, 971, 1050, 1246, 1578, 1629
PleI GAGTC 1 cut(s) 25
PpsI GAGTC 1 cut(s) 25
PscI ACATGT 1 cut(s) 996
Psp124BI GAGCTC 1 cut(s) 1044
Psp6I CCWGG 1 cut(s) 1592
PspFI CCCAGC 2 cut(s) 24, 1670
PspGI CCWGG 1 cut(s) 1592
PspPI GGNCC 2 cut(s) 43, 199
PstI CTGCAG 2 cut(s) 1581, 1632
PsuI RGATCY 1 cut(s) 1789
PvuII CAGCTG 2 cut(s) 500, 1576
RsaI GTAC 2 cut(s) 177, 1221
RsaNI GTAC 2 cut(s) 176, 1220
SacI GAGCTC 1 cut(s) 1044
SacII CCGCGG 1 cut(s) 90
SaqAI TTAA 4 cut(s) 399, 953, 1482, 1773
SatI GCNGC 9 cut(s) 501, 589, 708, 840, 970, 1049, 1245, 1577, 1628
Sau3AI GATC 9 cut(s) 613, 850, 928, 1163, 1387, 1439, 1537, 1789, 1803
Sau96I GGNCC 2 cut(s) 43, 199
ScaI AGTACT 1 cut(s) 1221
SchI GAGTC 1 cut(s) 26
ScrFI CCNGG 1 cut(s) 1594
SduI GDGCHC 4 cut(s) 141, 1044, 1102, 1203
SfaNI GCATC 4 cut(s) 128, 748, 1338, 1810
SfcI CTRYAG 2 cut(s) 1577, 1628
Sfr303I CCGCGG 1 cut(s) 90
SgrBI CCGCGG 1 cut(s) 90
SinI GGWCC 1 cut(s) 43
SmiI ATTTAAAT 1 cut(s) 1774
SmlI CTYRAG 7 cut(s) 6, 455, 718, 1013, 1393, 1507, 1793
SmoI CTYRAG 7 cut(s) 6, 455, 718, 1013, 1393, 1507, 1793
SphI GCATGC 1 cut(s) 1422
Sse9I AATT 4 cut(s) 128, 1743, 1758, 1775
SsiI CCGC 7 cut(s) 87, 89, 589, 725, 1287, 1351, 1431
SspMI CTAG 3 cut(s) 321, 393, 504
SstI GAGCTC 1 cut(s) 1044
StyD4I CCNGG 1 cut(s) 1592
StyI CCWWGG 1 cut(s) 913
SwaI ATTTAAAT 1 cut(s) 1774
TaaI ACNGT 7 cut(s) 231, 368, 376, 825, 1180, 1219, 1663
TaiI ACGT 2 cut(s) 864, 948
TaqI TCGA 7 cut(s) 171, 555, 671, 879, 1057, 1768, 1806
TaqII GACCGA 1 cut(s) 1118
TasI AATT 4 cut(s) 128, 1743, 1758, 1775
TatI WGTACW 1 cut(s) 1219
TauI GCSGC 1 cut(s) 591
TfiI GAWTC 4 cut(s) 479, 908, 1065, 1112
Tru1I TTAA 4 cut(s) 399, 953, 1482, 1773
Tru9I TTAA 4 cut(s) 399, 953, 1482, 1773
TscAI CASTG 3 cut(s) 234, 379, 1586
TseFI GTSAC 2 cut(s) 857, 869
TseI GCWGC 8 cut(s) 500, 707, 839, 969, 1048, 1244, 1576, 1627
Tsp45I GTSAC 2 cut(s) 857, 869
TspDTI ATGAA 6 cut(s) 114, 141, 148, 449, 1121, 1434
TspGWI ACGGA 2 cut(s) 1795, 1842
TspRI CASTG 3 cut(s) 234, 379, 1586
VpaK11BI GGWCC 1 cut(s) 43
XapI RAATTY 2 cut(s) 128, 1743
XbaI TCTAGA 1 cut(s) 392
XceI RCATGY 3 cut(s) 993, 1000, 1422
XspI CTAG 3 cut(s) 321, 393, 504
ZrmI AGTACT 1 cut(s) 1221
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.