RLG00000019314

RING-type E3 ubiquitin transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000153
Physical Location & Seq
Forward (+)
50165966 .. 50170013
4048 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019314

Sequence Viewer

Length: 1119 bp
ATGGCTCAAGCGCCTGAGTCTTCTCAGCCTATTGAACTTCATGACCACCACTTCTCACTAGAGGATGGTCTCATTCCTAGTTCCACCGCAGGGAATTGTCAAGGTAACTTATCACCATTCTTGGGATCCATCGAGTTGCTCCTAGCCACTAGTGCACAGTATATAATAGCATACGGTGATTTCTTTGACCCTTTAATGGAGATATATTCCCTTTATAGAGTTAAGAGGCAATTTGGCATCGATCAGGATGTGCCATCGCATCTATCTTACGGTGGACATCTTGGGGATTACATTATGGATTTCACTCAGACATATGCTATTTCTTGCAATGGTATACTTTCTGATAGTCTCGGGAAGAAAGACAGTGTCGGCTCTCCTACATTAACATTCTTGAAATTTTGGGAGCTGCAGCGGTGTGAGTTCAGAAGGTTTATTAAGACTGGTGGTACTAGGTTGTGTCCAAAAGCTAACAGTGAGAACAAGAGGCTGCTCTATAGTAGCACTGTTAAGGGTGTCATGTCTAGACTTAACCTTCCTTGTACTGAGGTATACTCGAATGGTATAAAGCGTGTGGTCGGTCATCTCAAGGGTGGCAAAGGTGGGGATGATGCCAAGGTAGACTTGCCAGTTGCTGGAATGGAGAAGGGTGACAAGTGTGCAACAAAGGGCAAAGTCAGGTCTTCCGAGAATAGAGAAGAAAGTAAAAGGAAGACGGAATTAGCTCCGGTGCTGTTCGAGGAGCTCTTCCTCATCCACCTCCTCCTGGTTCTCCAGTGGTACAATCGCCGGCGATCGCAAATTCTACCGTCACTGTCCCCAAATGTCAGCTACGAAAACGACGACGTTTTGATCAACGACATGTCGATGGATTTTCCGGCATGGTCGAATTCGCTGTCGAAGATGAGTAGGAACCAAACGGTGGGGCTGAAGGAGATGGAGAGCAGCTACGAGAGGGTTTTGGATGAGAATTGTAGGGTTTTCAGTGAGTATTTCAGGGAGGTTTTGGAGAATAAAGATGAAGGAAGAGTGATTGATCCACCGGCCATAGTGTTGGAATTGAGTGAAGGAAGTGATGAGTTCCGGTATGATGATCGGAGCACCGGAGAAGATGAAGGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
U-box WD40

Protein Analysis

373

Amino Acids

41.85

Weight (kDa)

5.21

Isoelectric Point (pI)

54.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARM_LIN PF23568 237 - 342 1.7e-09 E3 ubiquitin-protein ligase LIN-like, ARM repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000153)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25700 FvH4_2g11190 FvH4_2g11201 FvH4_2g16130 FvH4_3g40630 FvH4_4g02210 FvH4_4g14564 FvH4_6g24041 FvH4_6g24050 FvH4_6g24050
rosa_chinensis RchiOBHm_Chr1g0348241 RchiOBHm_Chr2g0109211 RchiOBHm_Chr2g0144471 RchiOBHm_Chr2g0174771 RchiOBHm_Chr3g0495101 RchiOBHm_Chr5g0047301 RchiOBHm_Chr5g0062201
rosa_laevigata RLG00000000570 RLG00000000571 RLG00000008718 RLG00000008719 RLG00000008835 RLG00000019314 RLG00000019316 RLG00000020979
rosa_multiflora Rmu_co8024416.1_g000001 Rmu_co8152282.1_g000001 Rmu_sc0000103.1_g000058 Rmu_sc0000161.1_g000022 Rmu_sc0000517.1_g000009 Rmu_sc0000517.1_g000010 Rmu_sc0000571.1_g000024 Rmu_sc0000580.1_g000130 Rmu_sc0000744.1_g000130 Rmu_sc0000796.1_g000017 Rmu_sc0000800.1_g000021 Rmu_sc0000830.1_g000037 Rmu_sc0000830.1_g000038 Rmu_sc0000830.1_g000059 Rmu_sc0000958.1_g000012 Rmu_sc0001094.1_g000018 Rmu_sc0001163.1_g000004 Rmu_sc0001200.1_g000052 Rmu_sc0001339.1_g000005 Rmu_sc0001397.1_g000009 Rmu_sc0001563.1_g000043 Rmu_sc0001563.1_g000044 Rmu_sc0001570.1_g000001 Rmu_sc0001629.1_g000016 Rmu_sc0001763.1_g000006 Rmu_sc0002011.1_g000013 Rmu_sc0002012.1_g000012 Rmu_sc0002268.1_g000026 Rmu_sc0002268.1_g000027 Rmu_sc0002321.1_g000021 Rmu_sc0002722.1_g000002 Rmu_sc0003032.1_g000006 Rmu_sc0003185.1_g000008 Rmu_sc0003238.1_g000006 Rmu_sc0003275.1_g000037 Rmu_sc0003275.1_g000038 Rmu_sc0003441.1_g000042 Rmu_sc0003748.1_g000027 Rmu_sc0004229.1_g000011 Rmu_sc0004283.1_g000041 Rmu_sc0004283.1_g000042 Rmu_sc0004283.1_g000043 Rmu_sc0004841.1_g000026 Rmu_sc0004841.1_g000031 Rmu_sc0004877.1_g000001 Rmu_sc0005039.1_g000012 Rmu_sc0005584.1_g000019 Rmu_sc0005584.1_g000020 Rmu_sc0005584.1_g000021 Rmu_sc0005600.1_g000021 Rmu_sc0005914.1_g000004 Rmu_sc0006139.1_g000006 Rmu_sc0006638.1_g000001 Rmu_sc0007228.1_g000001 Rmu_sc0007300.1_g000008 Rmu_sc0007486.1_g000002 Rmu_sc0007737.1_g000007 Rmu_sc0008328.1_g000015 Rmu_sc0009064.1_g000002 Rmu_sc0009315.1_g000006 Rmu_sc0009472.1_g000009 Rmu_sc0009774.1_g000016 Rmu_sc0009858.1_g000010 Rmu_sc0009858.1_g000011 Rmu_sc0010489.1_g000001 Rmu_sc0010579.1_g000002 Rmu_sc0011511.1_g000002 Rmu_sc0013359.1_g000001 Rmu_sc0014367.1_g000005 Rmu_sc0015624.1_g000003 Rmu_sc0016756.1_g000001 Rmu_sc0021286.1_g000001 Rmu_sc0021693.1_g000001 Rmu_sc0022538.1_g000001 Rmu_sc0030983.1_g000001 Rmu_sc0037682.1_g000001 Rmu_sc0041059.1_g000001 Rmu_ssc0000003.1_g000013 Rmu_ssc0000003.1_g000015 Rmu_ssc0000388.1_g000018 Rmu_ssc0000409.1_g000013 Rmu_ssc0000409.1_g000015 Rmu_ssc0000476.1_g000003
rosa_roxburghii Rroxscaffold_1G00017510 Rroxscaffold_1G00017520 Rroxscaffold_1G00017530 Rroxscaffold_1G00017990 Rroxscaffold_1G00031430 Rroxscaffold_1G00045790 Rroxscaffold_2G00108360 Rroxscaffold_2G00127910 Rroxscaffold_3G00218970 Rroxscaffold_3G00218980 Rroxscaffold_3G00218990 Rroxscaffold_3G00226450 Rroxscaffold_3G00226460 Rroxscaffold_3G00230570 Rroxscaffold_3G00230920 Rroxscaffold_4G00284360 Rroxscaffold_4G00292370 Rroxscaffold_4G00307090 Rroxscaffold_4G00319260 Rroxscaffold_4G00332580 Rroxscaffold_5G00341080 Rroxscaffold_5G00344620 Rroxscaffold_5G00358950 Rroxscaffold_5G00368600 Rroxscaffold_5G00368610 Rroxscaffold_5G00378350 Rroxscaffold_6G00388550 Rroxscaffold_6G00398560 Rroxscaffold_6G00398570 Rroxscaffold_7G00194900 Rroxscaffold_7G00194910 Rroxscaffold_7G00194920
rosa_rugosa Rorug05G0347200 Rorug06G0064400 Rorug06G0064500 Rorug07G0190700 Rorug07G0190800 Rorug07G0276200 Rorug07G0344800 Rorug07G0344900
rosa_samantha Rh1AG138000 Rh1AG138100 Rh1DG079100 Rh1DG264500 Rh1DG264600 Rh1DG275600 Rh1DG275700 Rh2AG474800 Rh2AG474900 Rh2AG557100 Rh2AG557200 Rh2AG567400 Rh2AG568000 Rh2AG568100 Rh3CG345000 Rh3CG351000 Rh3CG364300 Rh4AG186000 Rh5AG278000 Rh5DG280000 Rh5DG281700 Rh5DG447800 Rh7AG499400 Rh7BG470300 Rh7BG470400 Rh7DG197800 Rh7DG197900 Rh7DG198000 Rh7DG284800 Rh7DG311600 Rh7DG311700 Rh7DG329300 Rh7DG393300 Rh7DG393500 Rh7DG483800 Rh7DG483900
rosa_wichuraiana Rw0G003510 Rw1G021670 Rw2G016920 Rw3G020700 Rw7G028090 Rw7G031160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 632, 919
AccI GTMKAC 3 cut(s) 334, 549, 618
AciI CCGC 2 cut(s) 87, 412
AclWI GGATC 3 cut(s) 120, 133, 1028
AcoI YGGCCR 1 cut(s) 1041
AcsI RAATTY 3 cut(s) 395, 798, 886
AcuI CTGAAG 1 cut(s) 947
AfaI GTAC 3 cut(s) 448, 541, 779
AfiI CCNNNNNNNGG 6 cut(s) 90, 122, 196, 632, 763, 919
AflIII ACRYGT 1 cut(s) 858
AgsI TTSAA 2 cut(s) 35, 394
AhlI ACTAGT 1 cut(s) 149
AjnI CCWGG 1 cut(s) 762
AluBI AGCT 6 cut(s) 406, 467, 722, 742, 828, 945
AluI AGCT 6 cut(s) 406, 467, 722, 742, 828, 945
Alw21I GWGCWC 3 cut(s) 157, 744, 1100
Alw26I GTCTC 2 cut(s) 74, 353
Alw44I GTGCAC 1 cut(s) 153
AlwI GGATC 3 cut(s) 120, 133, 1028
AlwNI CAGNNNCTG 1 cut(s) 632
Ama87I CYCGRG 1 cut(s) 350
AoxI GGCC 1 cut(s) 1041
ApaLI GTGCAC 1 cut(s) 153
ApeKI GCWGC 4 cut(s) 406, 409, 487, 942
ApoI RAATTY 3 cut(s) 395, 798, 886
ArsI GACNNNNNNTTYG 2 cut(s) 878, 910
AsiSI GCGATCGC 1 cut(s) 794
AspLEI GCGC 1 cut(s) 13
AsuHPI GGTGA 3 cut(s) 105, 188, 659
AvaI CYCGRG 1 cut(s) 350
BaeGI GKGCMC 1 cut(s) 157
BamHI GGATCC 1 cut(s) 125
BanII GRGCYC 1 cut(s) 744
BbsI GAAGAC 3 cut(s) 12, 672, 716
Bbv12I GWGCWC 3 cut(s) 157, 744, 1100
BbvI GCAGC 4 cut(s) 393, 421, 474, 954
BccI CCATC 5 cut(s) 59, 137, 262, 859, 928
BciT130I CCWGG 1 cut(s) 764
BclI TGATCA 1 cut(s) 849
BcoDI GTCTC 2 cut(s) 74, 353
BcuI ACTAGT 1 cut(s) 149
BfaI CTAG 6 cut(s) 59, 78, 143, 150, 450, 522
BfmI CTRYAG 2 cut(s) 407, 493
BfoI RGCGCY 1 cut(s) 14
BisI GCNGC 4 cut(s) 407, 410, 488, 943
BlsI GCNGC 4 cut(s) 408, 411, 489, 944
Bme1390I CCNGG 1 cut(s) 764
BmeT110I CYCGRG 1 cut(s) 350
BmiI GGNNCC 2 cut(s) 127, 911
BmrFI CCNGG 1 cut(s) 764
BmsI GCATC 3 cut(s) 246, 268, 598
BpiI GAAGAC 3 cut(s) 12, 672, 716
BplI GAGNNNNNCTC 2 cut(s) 536, 568
BpmI CTGGAG 1 cut(s) 755
BpuEI CTTGAG 1 cut(s) 569
Bsa29I ATCGAT 1 cut(s) 240
BsaI GGTCTC 1 cut(s) 74
BsaJI CCNNGG 1 cut(s) 612
BsaWI WCCGGW 3 cut(s) 724, 1080, 1100
Bsc4I CCNNNNNNNGG 6 cut(s) 90, 122, 196, 632, 763, 919
Bse118I RCCGGY 2 cut(s) 786, 1039
Bse1I ACTGG 3 cut(s) 445, 626, 772
Bse3DI GCAATG 1 cut(s) 334
BseBI CCWGG 1 cut(s) 764
BseCI ATCGAT 1 cut(s) 240
BseDI CCNNGG 1 cut(s) 612
BseGI GGATG 5 cut(s) 70, 253, 610, 750, 967
BseLI CCNNNNNNNGG 6 cut(s) 90, 122, 196, 632, 763, 919
BseMI GCAATG 1 cut(s) 334
BseMII CTCAG 4 cut(s) 6, 38, 320, 534
BseNI ACTGG 3 cut(s) 445, 626, 772
BseRI GAGGAG 2 cut(s) 749, 752
BseSI GKGCMC 1 cut(s) 157
BseXI GCAGC 4 cut(s) 393, 421, 474, 954
Bsh1285I CGRYCG 1 cut(s) 794
BshFI GGCC 1 cut(s) 1043
BshVI ATCGAT 1 cut(s) 240
BsiEI CGRYCG 1 cut(s) 794
BsiHKAI GWGCWC 3 cut(s) 157, 744, 1100
BsiHKCI CYCGRG 1 cut(s) 350
BsiSI CCGG 6 cut(s) 725, 787, 875, 1040, 1081, 1101
BslFI GGGAC 1 cut(s) 799
BslI CCNNNNNNNGG 6 cut(s) 90, 122, 196, 632, 763, 919
BsmAI GTCTC 2 cut(s) 74, 353
BsmFI GGGAC 1 cut(s) 799
BsnI GGCC 1 cut(s) 1043
Bso31I GGTCTC 1 cut(s) 74
BsoBI CYCGRG 1 cut(s) 350
Bsp1286I GDGCHC 3 cut(s) 157, 744, 1100
Bsp143I GATC 6 cut(s) 125, 241, 791, 849, 1033, 1090
BspACI CCGC 2 cut(s) 87, 412
BspANI GGCC 1 cut(s) 1043
BspCNI CTCAG 4 cut(s) 7, 37, 319, 535
BspDI ATCGAT 1 cut(s) 240
BspHI TCATGA 1 cut(s) 40
BspLI GGNNCC 2 cut(s) 127, 911
BspMAI CTGCAG 1 cut(s) 411
BspPI GGATC 3 cut(s) 120, 133, 1028
BspQI GCTCTTC 1 cut(s) 749
BspTNI GGTCTC 1 cut(s) 74
BsrDI GCAATG 1 cut(s) 334
BsrFI RCCGGY 2 cut(s) 786, 1039
BsrI ACTGG 3 cut(s) 445, 626, 772
BssAI RCCGGY 2 cut(s) 786, 1039
BssECI CCNNGG 1 cut(s) 612
BssMI GATC 6 cut(s) 125, 241, 791, 849, 1033, 1090
BssNAI GTATAC 2 cut(s) 335, 550
BssT1I CCWWGG 1 cut(s) 612
Bst1107I GTATAC 2 cut(s) 335, 550
Bst2UI CCWGG 1 cut(s) 764
Bst4CI ACNGT 9 cut(s) 159, 176, 272, 365, 473, 505, 807, 813, 919
Bst6I CTCTTC 2 cut(s) 749, 1018
BstC8I GCNNGC 1 cut(s) 788
BstDEI CTNAG 4 cut(s) 15, 24, 306, 543
BstF5I GGATG 5 cut(s) 70, 253, 610, 750, 967
BstH2I RGCGCY 1 cut(s) 14
BstHHI GCGC 1 cut(s) 13
BstKTI GATC 6 cut(s) 128, 244, 794, 852, 1036, 1093
BstMAI GTCTC 2 cut(s) 74, 353
BstMBI GATC 6 cut(s) 125, 241, 791, 849, 1033, 1090
BstMCI CGRYCG 1 cut(s) 794
BstMWI GCNNNNNNNGC 1 cut(s) 152
BstNI CCWGG 1 cut(s) 764
BstNSI RCATGY 1 cut(s) 862
BstSCI CCNGG 1 cut(s) 762
BstSFI CTRYAG 2 cut(s) 407, 493
BstSLI GKGCMC 1 cut(s) 157
BstV1I GCAGC 4 cut(s) 393, 421, 474, 954
BstV2I GAAGAC 3 cut(s) 12, 672, 716
BstX2I RGATCY 1 cut(s) 125
BstXI CCANNNNNNTGG 1 cut(s) 1051
BstYI RGATCY 1 cut(s) 125
BstZ17I GTATAC 2 cut(s) 335, 550
Bsu15I ATCGAT 1 cut(s) 240
BsuRI GGCC 1 cut(s) 1043
BsuTUI ATCGAT 1 cut(s) 240
BtgZI GCGATG 1 cut(s) 240
BtsCI GGATG 5 cut(s) 70, 253, 610, 750, 967
BtsIMutI CAGTG 6 cut(s) 370, 478, 501, 779, 809, 988
Cac8I GCNNGC 1 cut(s) 788
CaiI CAGNNNCTG 1 cut(s) 632
CciI TCATGA 1 cut(s) 40
CfoI GCGC 1 cut(s) 13
Cfr10I RCCGGY 2 cut(s) 786, 1039
ClaI ATCGAT 1 cut(s) 240
Csp6I GTAC 3 cut(s) 447, 540, 778
CviAII CATG 4 cut(s) 41, 517, 859, 879
CviQI GTAC 3 cut(s) 447, 540, 778
DdeI CTNAG 4 cut(s) 15, 24, 306, 543
DpnI GATC 6 cut(s) 127, 243, 793, 851, 1035, 1092
DpnII GATC 6 cut(s) 125, 241, 791, 849, 1033, 1090
EaeI YGGCCR 1 cut(s) 1041
Eam1104I CTCTTC 2 cut(s) 749, 1018
EarI CTCTTC 2 cut(s) 749, 1018
Ecl136II GAGCTC 1 cut(s) 742
Eco130I CCWWGG 1 cut(s) 612
Eco24I GRGCYC 1 cut(s) 744
Eco31I GGTCTC 1 cut(s) 74
Eco53kI GAGCTC 1 cut(s) 742
Eco57I CTGAAG 1 cut(s) 947
Eco88I CYCGRG 1 cut(s) 350
EcoICRI GAGCTC 1 cut(s) 742
EcoRI GAATTC 1 cut(s) 886
EcoRII CCWGG 1 cut(s) 762
EcoT14I CCWWGG 1 cut(s) 612
EcoT38I GRGCYC 1 cut(s) 744
ErhI CCWWGG 1 cut(s) 612
FaeI CATG 4 cut(s) 44, 520, 862, 882
FalI AAGNNNNNCTT 2 cut(s) 605, 637
FaqI GGGAC 1 cut(s) 799
FatI CATG 4 cut(s) 40, 516, 858, 878
FauNDI CATATG 1 cut(s) 313
FbaI TGATCA 1 cut(s) 849
FblI GTMKAC 3 cut(s) 334, 549, 618
Fnu4HI GCNGC 4 cut(s) 407, 410, 488, 943
FokI GGATG 5 cut(s) 77, 260, 617, 737, 974
FriOI GRGCYC 1 cut(s) 744
Fsp4HI GCNGC 4 cut(s) 407, 410, 488, 943
FspBI CTAG 6 cut(s) 59, 78, 143, 150, 450, 522
GlaI GCGC 1 cut(s) 12
GluI GCNGC 4 cut(s) 407, 410, 488, 943
GsuI CTGGAG 1 cut(s) 755
HaeII RGCGCY 1 cut(s) 14
HaeIII GGCC 1 cut(s) 1043
HapII CCGG 6 cut(s) 725, 787, 875, 1040, 1081, 1101
HhaI GCGC 1 cut(s) 13
Hin1II CATG 4 cut(s) 44, 520, 862, 882
Hin6I GCGC 1 cut(s) 11
HinP1I GCGC 1 cut(s) 11
HinfI GANTC 1 cut(s) 17
HpaII CCGG 6 cut(s) 725, 787, 875, 1040, 1081, 1101
HphI GGTGA 3 cut(s) 105, 188, 659
Hpy166II GTNNAC 5 cut(s) 155, 275, 335, 550, 619
Hpy188I TCNGA 5 cut(s) 309, 343, 425, 685, 1095
Hpy188III TCNNGA 5 cut(s) 41, 245, 352, 391, 522
Hpy8I GTNNAC 5 cut(s) 155, 275, 335, 550, 619
Hpy99I CGWCG 2 cut(s) 842, 845
HpyAV CCTTC 7 cut(s) 420, 542, 637, 922, 1013, 1058, 1106
HpyCH4III ACNGT 9 cut(s) 159, 176, 272, 365, 473, 505, 807, 813, 919
HpyCH4IV ACGT 1 cut(s) 843
HpyCH4V TGCA 4 cut(s) 155, 327, 409, 659
HpyF10VI GCNNNNNNNGC 1 cut(s) 152
HpyF3I CTNAG 4 cut(s) 15, 24, 306, 543
HpySE526I ACGT 1 cut(s) 843
Hsp92II CATG 4 cut(s) 44, 520, 862, 882
HspAI GCGC 1 cut(s) 11
KroI GCCGGC 1 cut(s) 786
KroNI GCCGGC 1 cut(s) 788
Ksp22I TGATCA 1 cut(s) 849
Kzo9I GATC 6 cut(s) 125, 241, 791, 849, 1033, 1090
LguI GCTCTTC 1 cut(s) 749
LmnI GCTCC 5 cut(s) 144, 403, 727, 739, 1095
Lsp1109I GCAGC 4 cut(s) 393, 421, 474, 954
LweI GCATC 3 cut(s) 246, 268, 598
MaeI CTAG 6 cut(s) 59, 78, 143, 150, 450, 522
MaeII ACGT 1 cut(s) 843
MaeIII GTNAC 3 cut(s) 104, 647, 807
MalI GATC 6 cut(s) 127, 243, 793, 851, 1035, 1092
MboI GATC 6 cut(s) 125, 241, 791, 849, 1033, 1090
MboII GAAGA 9 cut(s) 12, 367, 672, 707, 721, 736, 910, 1035, 1118
MflI RGATCY 1 cut(s) 125
MhlI GDGCHC 3 cut(s) 157, 744, 1100
MluCI AATT 8 cut(s) 94, 230, 395, 716, 798, 886, 967, 1055
MlyI GAGTC 1 cut(s) 26
MmeI TCCRAC 1 cut(s) 1032
MreI CGCCGGCG 1 cut(s) 786
MroNI GCCGGC 1 cut(s) 786
MseI TTAA 6 cut(s) 194, 222, 383, 435, 507, 528
MslI CAYNNNNRTG 1 cut(s) 863
MspA1I CMGCKG 1 cut(s) 412
MspI CCGG 6 cut(s) 725, 787, 875, 1040, 1081, 1101
MspR9I CCNGG 1 cut(s) 764
MvaI CCWGG 1 cut(s) 764
MwoI GCNNNNNNNGC 1 cut(s) 152
NaeI GCCGGC 1 cut(s) 788
NdeI CATATG 1 cut(s) 313
NdeII GATC 6 cut(s) 125, 241, 791, 849, 1033, 1090
NgoMIV GCCGGC 1 cut(s) 786
NlaIII CATG 4 cut(s) 44, 520, 862, 882
NlaIV GGNNCC 2 cut(s) 127, 911
NmuCI GTSAC 2 cut(s) 647, 807
NspI RCATGY 1 cut(s) 862
PagI TCATGA 1 cut(s) 40
PciI ACATGT 1 cut(s) 858
PciSI GCTCTTC 1 cut(s) 749
PcsI WCGNNNNNNNCGW 1 cut(s) 837
PdiI GCCGGC 1 cut(s) 788
PflFI GACNNNGTC 1 cut(s) 365
PflMI CCANNNNNTGG 2 cut(s) 632, 919
PkrI GCNGC 4 cut(s) 408, 411, 489, 944
Ple19I CGATCG 1 cut(s) 794
PleI GAGTC 1 cut(s) 25
PpsI GAGTC 1 cut(s) 25
PscI ACATGT 1 cut(s) 858
Psp124BI GAGCTC 1 cut(s) 744
Psp6I CCWGG 1 cut(s) 762
PspGI CCWGG 1 cut(s) 762
PspN4I GGNNCC 2 cut(s) 127, 911
PstI CTGCAG 1 cut(s) 411
PstNI CAGNNNCTG 1 cut(s) 632
PsuI RGATCY 1 cut(s) 125
PsyI GACNNNGTC 1 cut(s) 365
PvuI CGATCG 1 cut(s) 794
RgaI GCGATCGC 1 cut(s) 794
RsaI GTAC 3 cut(s) 448, 541, 779
RsaNI GTAC 3 cut(s) 447, 540, 778
RseI CAYNNNNRTG 1 cut(s) 863
SacI GAGCTC 1 cut(s) 744
SapI GCTCTTC 1 cut(s) 749
SaqAI TTAA 6 cut(s) 194, 222, 383, 435, 507, 528
SatI GCNGC 4 cut(s) 407, 410, 488, 943
Sau3AI GATC 6 cut(s) 125, 241, 791, 849, 1033, 1090
SchI GAGTC 1 cut(s) 26
ScrFI CCNGG 1 cut(s) 764
SduI GDGCHC 3 cut(s) 157, 744, 1100
SfaAI GCGATCGC 1 cut(s) 794
SfaNI GCATC 3 cut(s) 246, 268, 598
SfcI CTRYAG 2 cut(s) 407, 493
SgfI GCGATCGC 1 cut(s) 794
SgrAI CRCCGGYG 1 cut(s) 786
SmiMI CAYNNNNRTG 1 cut(s) 863
SmlI CTYRAG 2 cut(s) 6, 584
SmoI CTYRAG 2 cut(s) 6, 584
SpeI ACTAGT 1 cut(s) 149
Sse9I AATT 8 cut(s) 94, 230, 395, 716, 798, 886, 967, 1055
SsiI CCGC 2 cut(s) 87, 412
SspMI CTAG 6 cut(s) 59, 78, 143, 150, 450, 522
SstI GAGCTC 1 cut(s) 744
StyD4I CCNGG 1 cut(s) 762
StyI CCWWGG 1 cut(s) 612
TaaI ACNGT 9 cut(s) 159, 176, 272, 365, 473, 505, 807, 813, 919
TaiI ACGT 1 cut(s) 846
TaqI TCGA 7 cut(s) 132, 240, 554, 735, 863, 884, 896
TaqII GACCGA 1 cut(s) 566
TasI AATT 8 cut(s) 94, 230, 395, 716, 798, 886, 967, 1055
TatI WGTACW 1 cut(s) 539
Tru1I TTAA 6 cut(s) 194, 222, 383, 435, 507, 528
Tru9I TTAA 6 cut(s) 194, 222, 383, 435, 507, 528
TscAI CASTG 6 cut(s) 370, 478, 508, 779, 816, 988
TseFI GTSAC 2 cut(s) 647, 807
TseI GCWGC 4 cut(s) 406, 409, 487, 942
Tsp45I GTSAC 2 cut(s) 647, 807
TspDTI ATGAA 2 cut(s) 29, 1032
TspGWI ACGGA 1 cut(s) 728
TspRI CASTG 6 cut(s) 370, 478, 508, 779, 816, 988
Tth111I GACNNNGTC 1 cut(s) 365
Van91I CCANNNNNTGG 2 cut(s) 632, 919
VneI GTGCAC 1 cut(s) 153
XapI RAATTY 3 cut(s) 395, 798, 886
XbaI TCTAGA 1 cut(s) 521
XceI RCATGY 1 cut(s) 862
XmiI GTMKAC 3 cut(s) 334, 549, 618
XspI CTAG 6 cut(s) 59, 78, 143, 150, 450, 522
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.